Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os07g19210 | OGI:07033020 | 15/16 | Nipponbare | IRGSP 1.0 | MSU | Chr07:11380988-11383790 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | TTAATTTATGTGTCCCATAAGCTGATATTGTTCATGTTTCACAGGCACAATAAAAAGTTCCACTTTCCGGCGAAAAGAAATCTGCCCTATTTCCTCCATATCAATATCTTCTTCCTTCATTCCCTTTGGAAGTTTCCAATCAAAGCAATACAACAAATTGGCCACTACAAGCTCTAAACTAGTCACAGCCATGGCAACACCAGGACAAATCCTTCTCCCTGAGCCAAATGGAACAAGCTCAAAGTTGGAGCCTCTAAAATCCATATTTCTGTCCTCAAACCTCTCTGGGTAGAATTCCTCTGGATTGTCCCATATCATAGGACCTCTTCCCATTGCCCATATGTTTATAAACACCCTTGTTCCTGATGGCACATTGTATCCACCAATCAAGCACGGTTGCATGGTTTGTCTTGGAACCAACAAGTTCCCTGGTGGGTGCAGCCTAAAATTTTCTTTTATTATCATCTCGAGGTACTTGAGGTTTTGGCTATCTTCTTCATCTACCAGTGGTTTGTTTTTCACGGTGTTGCGAACTTCAGCTCGTGCCTTTTGCATCACCCTTGGATTCCTCATGATCTCGGACATTATCCAAATTGCAGTTATAGCAGTTGTGTCAATTCCTCCAGCAAATGTATTCTGAAATATAAAGTGTGATCCGAGTATATGATACAATGTGATATATCTGAATAGCAACAGGCTTAGTAGTGGGCTATGGGACACCCATGTGTAGTTTGTTGAAAATAAAGCAATTCATACTAGAATTTTATGTGTTGTTTTTTCCTAAAAAAAATTCACGAAATAGGACATGCAACCGAGACACCACTAAGGAGAACTAGCCATCCAAGGAGAGTGACCCATACAGAATTTCACAGAGCGCTTTAGCTTCTGGAATACAACAAAAAGAACTCTCTCTAGCCACCACATGCAAAATATCTAAGATGCACGGAAAAGCACTGTTGAAGACACAACCATTGCATTTCTTCCATACACACAATTATGTGTAGGTTTTCATAAACTAATAAATTACCTTTAGCTTAAGAACCAATCATTTTTCATCCAAAATCTTAAAATGATTTGGCACTTCCCACCATATTTATGCATGTTCACCTCGGCCACACACATGAATTGAAATTTTGTTGTAATTTTTTAAAATTTCATCAGCAAATACCTAGGGTCAAGGTCACTTTTACCTACCCCTCCATCCCCAAAAGAACACAATTCTATAATTCAAATTTTGTCCGAAAAGATCATCACCCTAGAACACTAGTTGTGTCGTCAATCATCTCCCATTGAAATTTCTTCCCATCTTATCACCAAACATACCCTCTCACTCCCAACCATCCCTTATTTAACAAGGGGCATCTAGGTCATTTATATTCCTTACTGAAACCCCTTTTAAAGAATTGCAATCCTTATGAGATGTAGATTAATGCAGAGAGGGAGAGCATTATGAGAAAACCCGCATTGCCCTCTATTTATTGAAAAGTAGATGAACAGTGGGAGGTGAGGGATGTGGCGTGGTGTGGCTTGGTAGTGTAGGATATGATTGGCTTCTAGCGGTTCCTCTTCCAAAGAGTTTGCACAATAACCGATAGAAGTGAAAGTAGTTGAAGTAGTGGTATGAGGAAGACGAAAGGACAAACACACACATGTATTAAGACACACACGGGTGGGTGTCTCAACAGTTGAGAGCACGCGGGTATTTAAAAGCACTGGACATGTAAAATAAATCGACAGACGATTTCTTAGAAGAGCTATGTGGGAAAATTATATTATCACAGGTGGCCGCCTAAAATAACCAACTAATTTTAGGTGACGTCACGTAATAATGTGTTTACACAAGCAACTCTTGACCCCTCTCCCCTTGCCAACCTAATGCATGGCATTTTTATTTTGGTCATGTGTAATTAAGGATGAGAGGACTGTGAAAATCGTTTTTCTAGCGCCATTAGTGTAAAGATACAAACAAAGCTGGCATTGTTCACTTATGCTTTAACAGTATATGGTGGATAATTTCAATAACGAACTCTATGCGCCATTAGTGAGACGCAAAATATATTTCCAACCTAGCTAGAGAACGGAGCAATCGTAATGTTGTAAAACTTGACAAATTATAGTGGAATATGGACGATATCGACACATCTGATCCGCAATGCTGACATGAAAAAAGAGACGAAATTTAGCATAGAAATGAAACGAACTAAATCCATACCATCAAGATTGCCTTGATATGCTCGCGCGTTAGTACTCCAGATGGCCTATCCTGCTGCTCCCTCCACATCTTCACCAGCGCGTCGACCATGTCTTCCTGCACCCCTGCACTCAGCCTCTCGGGCTCGAGGTGCTTGTCGATCACCGAGTCGAGGAAGCCGTCGACCTGCCGGAATATCCGCCTCCGCCTCCGTTCCACCCCCGCGAGGGCATCGGCCCACCGCGCCAGCGCCGACGACGGGAAGAAATCCTCGAAGCTGAAGCTGCCGAGCACGAGCAGCAGCTCGCTCAGCACGTCCTGGAACACGGCCCGCTCCGTCGACCACTGCGCCGCGCCGTACCCCTTCCCGAAGGCCACCGTACCGATGATGCCGTCGAGGAGTTGGTACAGCGCGCAGCTGAGGTCGACGGGGACGCCTGGCGGGGAGGCGGCGAGGGTGTCGACGAGGCGGGCGACCTCGGCGGCCCGCGCGTAGGCGAAGGAGCGGACGCGGCTCACACTGGTCAGCTCGACGACGAAGAGCTTCCTCATCTCACGCCAGTAGTCGCTGTAGGGGGCGAAGGCCACGTCCAGGTAGTTGTAGCTCAGCAT
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| CDS seq | ATGCTGAGCTACAACTACCTGGACGTGGCCTTCGCCCCCTACAGCGACTACTGGCGTGAGATGAGGAAGCTCTTCGTCGTCGAGCTGACCAGTGTGAGCCGCGTCCGCTCCTTCGCCTACGCGCGGGCCGCCGAGGTCGCCCGCCTCGTCGACACCCTCGCCGCCTCCCCGCCAGGCGTCCCCGTCGACCTCAGCTGCGCGCTGTACCAACTCCTCGACGGCATCATCGGTACGGTGGCCTTCGGGAAGGGGTACGGCGCGGCGCAGTGGTCGACGGAGCGGGCCGTGTTCCAGGACGTGCTGAGCGAGCTGCTGCTCGTGCTCGGCAGCTTCAGCTTCGAGGATTTCTTCCCGTCGTCGGCGCTGGCGCGGTGGGCCGATGCCCTCGCGGGGGTGGAACGGAGGCGGAGGCGGATATTCCGGCAGGTCGACGGCTTCCTCGACTCGGTGATCGACAAGCACCTCGAGCCCGAGAGGCTGAGTGCAGGGGTGCAGGAAGACATGGTCGACGCGCTGGTGAAGATGTGGAGGGAGCAGCAGGATAGGCCATCTGGAGTACTAACGCGCGAGCATATCAAGGCAATCTTGATGAATACATTTGCTGGAGGAATTGACACAACTGCTATAACTGCAATTTGGATAATGTCCGAGATCATGAGGAATCCAAGGGTGATGCAAAAGGCACGAGCTGAAGTTCGCAACACCGTGAAAAACAAACCACTGGTAGATGAAGAAGATAGCCAAAACCTCAAGTACCTCGAGATGATAATAAAAGAAAATTTTAGGCTGCACCCACCAGGGAACTTGTTGGTTCCAAGACAAACCATGCAACCGTGCTTGATTGGTGGATACAATGTGCCATCAGGAACAAGGGTGTTTATAAACATATGGGCAATGGGAAGAGGTCCTATGATATGGGACAATCCAGAGGAATTCTACCCAGAGAGGTTTGAGGACAGAAATATGGATTTTAGAGGCTCCAACTTTGAGCTTGTTCCATTTGGCTCAGGGAGAAGGATTTGTCCTGGTGTTGCCATGGCTGTGACTAGTTTAGAGCTTGTAGTGGCCAATTTGTTGTATTGCTTTGATTGGAAACTTCCAAAGGGAATGAAGGAAGAAGATATTGATATGGAGGAAATAGGGCAGATTTCTTTTCGCCGGAAAGTGGAACTTTTTATTGTGCCTGTGAAACATGAACAATATCAGCTTATGGGACACATAAATTAA
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| Protein seq | MLSYNYLDVAFAPYSDYWREMRKLFVVELTSVSRVRSFAYARAAEVARLVDTLAASPPGVPVDLSCALYQLLDGIIGTVAFGKGYGAAQWSTERAVFQDVLSELLLVLGSFSFEDFFPSSALARWADALAGVERRRRRIFRQVDGFLDSVIDKHLEPERLSAGVQEDMVDALVKMWREQQDRPSGVLTREHIKAILMNTFAGGIDTTAITAIWIMSEIMRNPRVMQKARAEVRNTVKNKPLVDEEDSQNLKYLEMIIKENFRLHPPGNLLVPRQTMQPCLIGGYNVPSGTRVFINIWAMGRGPMIWDNPEEFYPERFEDRNMDFRGSNFELVPFGSGRRICPGVAMAVTSLELVVANLLYCFDWKLPKGMKEEDIDMEEIGQISFRRKVELFIVPVKHEQYQLMGHIN |
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| Function | 4-hydroxyphenylacetaldehyde oxime monooxygenase [UniProtKB/Swiss-Prot:O48958] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os07g19210 | LOC_Os07g19210.1 | Chr07 | 11380988 | 11383790 | - | MSU_osa1r7 | ||
| CDS seq | ATGCTGAGCTACAACTACCTGGACGTGGCCTTCGCCCCCTACAGCGACTACTGGCGTGAGATGAGGAAGCTCTTCGTCGTCGAGCTGACCAGTGTGAGCCGCGTCCGCTCCTTCGCCTACGCGCGGGCCGCCGAGGTCGCCCGCCTCGTCGACACCCTCGCCGCCTCCCCGCCAGGCGTCCCCGTCGACCTCAGCTGCGCGCTGTACCAACTCCTCGACGGCATCATCGGTACGGTGGCCTTCGGGAAGGGGTACGGCGCGGCGCAGTGGTCGACGGAGCGGGCCGTGTTCCAGGACGTGCTGAGCGAGCTGCTGCTCGTGCTCGGCAGCTTCAGCTTCGAGGATTTCTTCCCGTCGTCGGCGCTGGCGCGGTGGGCCGATGCCCTCGCGGGGGTGGAACGGAGGCGGAGGCGGATATTCCGGCAGGTCGACGGCTTCCTCGACTCGGTGATCGACAAGCACCTCGAGCCCGAGAGGCTGAGTGCAGGGGTGCAGGAAGACATGGTCGACGCGCTGGTGAAGATGTGGAGGGAGCAGCAGGATAGGCCATCTGGAGTACTAACGCGCGAGCATATCAAGGCAATCTTGATGAATACATTTGCTGGAGGAATTGACACAACTGCTATAACTGCAATTTGGATAATGTCCGAGATCATGAGGAATCCAAGGGTGATGCAAAAGGCACGAGCTGAAGTTCGCAACACCGTGAAAAACAAACCACTGGTAGATGAAGAAGATAGCCAAAACCTCAAGTACCTCGAGATGATAATAAAAGAAAATTTTAGGCTGCACCCACCAGGGAACTTGTTGGTTCCAAGACAAACCATGCAACCGTGCTTGATTGGTGGATACAATGTGCCATCAGGAACAAGGGTGTTTATAAACATATGGGCAATGGGAAGAGGTCCTATGATATGGGACAATCCAGAGGAATTCTACCCAGAGAGGTTTGAGGACAGAAATATGGATTTTAGAGGCTCCAACTTTGAGCTTGTTCCATTTGGCTCAGGGAGAAGGATTTGTCCTGGTGTTGCCATGGCTGTGACTAGTTTAGAGCTTGTAGTGGCCAATTTGTTGTATTGCTTTGATTGGAAACTTCCAAAGGGAATGAAGGAAGAAGATATTGATATGGAGGAAATAGGGCAGATTTCTTTTCGCCGGAAAGTGGAACTTTTTATTGTGCCTGTGAAACATGAACAATATCAGCTTATGGGACACATAAATTAA
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| Protein seq | MLSYNYLDVAFAPYSDYWREMRKLFVVELTSVSRVRSFAYARAAEVARLVDTLAASPPGVPVDLSCALYQLLDGIIGTVAFGKGYGAAQWSTERAVFQDVLSELLLVLGSFSFEDFFPSSALARWADALAGVERRRRRIFRQVDGFLDSVIDKHLEPERLSAGVQEDMVDALVKMWREQQDRPSGVLTREHIKAILMNTFAGGIDTTAITAIWIMSEIMRNPRVMQKARAEVRNTVKNKPLVDEEDSQNLKYLEMIIKENFRLHPPGNLLVPRQTMQPCLIGGYNVPSGTRVFINIWAMGRGPMIWDNPEEFYPERFEDRNMDFRGSNFELVPFGSGRRICPGVAMAVTSLELVVANLLYCFDWKLPKGMKEEDIDMEEIGQISFRRKVELFIVPVKHEQYQLMGHIN
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.125189 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_07g0291750 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | Os07g0291750 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0010880 | RBH | 0.119817 | 0.0 | 0.723803 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0010820 | RBH | 0.262710 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_07g0010830 | RBH | 0.0 | 1.100741 | 1.645339 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_07g0010750 | RBH | 0.0 | 0.000000 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0010720 | SBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0201000 | RBH | 1.7783065 | 0.0055945 | 0.0119135 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0011240 | RBH | 0.766380 | 0.0 | 0.479418 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0201400 | RBH | 2.571502 | 0.04851 | 0.2058625 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_07g0010670 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0010740 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0010680 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_07g0011040 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_07g0010770 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G010740 | SBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0010530 | SBH | 0.0 | 0.0 | 0.0 |
