Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os07g09590 | OGI:07014710 | 16/16 | Nipponbare | IRGSP 1.0 | MSU | Chr07:5082119-5084790 | ||||||||
| Gene Symbol | OsbHLH094, bHLH094, bHLH94 | ||||||||||
| DNA seq | TCATGTCACTCTTTCATATGCATTTCCAATCTGCATGTGAAGCCACTCTGATGTTGAACCCTGGGCAAATTCCCTTGTTGTTTGTGGATCAAATGTCAAACCAGCAGCTGTGTTATATGGCTGAGCACCAAACTGCAAGACCACAGGCACTAGTTAATCTTTTTGAACCCTGTATGAACATTTTAAGACCTCATTTCAGGAGGAACAAATGCTACATAAACAATGTGTCATTTGGCCTAGACAGGAGGTGACCTGTCATTATTTGCAAGTATAGATATTATTCATCACCATTAGAAAAGATCCAGTAACTTAGCAAAGCCGTTTTAAAAGTCTATGAATTGTTTTGCATGTTGAAAGTTATATCTATGTGCAAAACAAGATTCCTGTGCAATCATCTATGTAACTGAAACATCAGTAGAAAATACTGATCTCTCAAGCCATTTGTTTCCAAAGGATGGTATTGTCTACTTTCATTTAGAGTTGAGGGATGAAAATTGGACAAAATAAGAGTTTAAGGATGAAAAGTAGACTTAATCCATAACATTTTAATTGCTCCATGTCCAATGAATTGAAAATAATGTAAATGTAGAGCGTAAAATGGAGATTCAGGAAACAAATACACACTGAGTAAAATAATAAGCTCAGCAAACAAGTCAGGTCAATTTGAAATGTTAAGAGCTGAAGCTGAGATAATAATCAAGAATCTTGTAAGCTCAATAAATAGTTGTTCAAAACTAAACTTACATCTTTAGATGGAAAAGCAACAATTCCGTTAATCATGTGACTATTAACTGCTTCAAGCTTCATGGACAAAAACTGCAGAAACAGCTCAATTAGGTACTTAAACATAAACTAGAAGACAACTCCATGCCAAGCATGATTGAGAAAATGTAATACCTCAACTTGATGCTGTAAAGACTGGATGTAATTTATTATTTCATCAAGGACTGATGCTTTCCCAATGACCTGAGGAATTGAAAAGTAAATATTATAAAAGAGAACCATTTACTCATAATAGAATTTTGAGAGAACAAAGAGCTTTAAAGTAACAAAAACTTGAAAACATGATGGTATTCAAAGTGCACCTTATTGCATCCAGGGACAAGATCTTGAAGAATTTTCATCCGTTCACTTATCTTCTCTCGCCGTGCCTGTCAATAAACAAATATTAAGCTGATATGATTATCATGTTACTACCCGCAATCCACCTTGAGCAATATCTGAACATTACATTTTCTGTGATGAGTTGGTTGTCACTCTGTTATAATCTTGTGAGAGAATATTATAACTTGTATAGTTAAAATGAAAACCGAAAATTAGGGAAAAAAAATATTGTGTAAGAGCTTACCCGCTCCGCAAGGCTATGGCTATCGGTTGCTTGACCTCTTCTTGCCCTCACATGAATGTAGTCTTGTTTTGGTGGCTCTGGTGGTGTAGCATTTTTATCAGCAGCCTTACTGCTGTTTCCTGAATCGGTTCCAGCTTCTGTCCTTAAACTATCATTCTTATCACTAGATTTCATTGGTTTCAAACGTTTTGCTTCTGGAGCATCCTGGAAAGTAGGGTGGTGACTTTCAGTTGATTTGAATATCCATGTAGATAGTCGATGAAGTATAAACACAAGTATCCAGATATATCATCCACACTGAAGTGAACCACCTATAAATTTACTTTACATTTTTAAAATACAAATGAAATTCAATCATAAATAAGAAACGGAGGATTTGTACAGTACAAAGAATTCAAGGTTTTATAAATTAAGCAGCACTAATTTGCGGGTCAACTACAAGTTCTTGAAATGACAAAAAGAACAACATCACATATACTCCCGAAATCGTTTTGGTGATGTGTGACTAACCCAAGGAACAACGGAACAGTCCAGCAAATACAGTGTCTCAACTAAACTAACAATATGCTTGAATTACCCAAGGTCTGATGGAGTGATGGTGCCATCAATATATGACAGCTTTGAATATGCAAAGGCTCAAGCACCAACAAAATAAATTCATACTTCAACTGTCATGCTACAGCTTCAGAAAGTTAGCAACATCCTAGACTAAGGCTAGGATGCCAATGAACCCAAATGAACTGACATGCCCGCATATCTGATTCCCACTCTACAAGGCACTGACCAGTATTGAGCATTTCAAAATCATTTATCAGTATTGGACACTGGCATGGACTTGGCATTTGGAAGATTTTGATCTGTGTTAACTAGGTTTGGCGCTGCTCAAGCACTGAAGCTAAACTGCTCCCCACGCTGCTACTGCCATAGCTACAGTAGCAGCAGCGCATGTGCATCCACATGGACAAGCAGATCACGGCGAACAGGGCCATCAAAAACCACGATTCCACAGCTTCCCCCCTTGCTTTGCAACCCCCAACCCCGAAACCCACCAACCCCAACACAGATCGCGCCCAATGCGGTTCCCCCACGGCCTTACCGAGTCCTGCCCGCCGCCGCCGCCGCCGCCGGAGGCGGCGGAGGTGGAGACGACCTTGGACAAGTCGTCGTCCTCGGGCCCCGCGTCGCTCCGCGGCCTCCTGCGCCCGCTTCCTCCTCCGCCGCGGCTTCCGCTCCCCTGGTCGGTGACGACGGACGACGCCTCGAAGTGGTGGCGGTGGTGATGCGGCCGCCAGAGCTCCGCCGCGAGCGAGGGGGCCGGGTCCAT
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| CDS seq | ATGGACCCGGCCCCCTCGCTCGCGGCGGAGCTCTGGCGGCCGCATCACCACCGCCACCACTTCGAGGCGTCGTCCGTCGTCACCGACCAGGGGAGCGGAAGCCGCGGCGGAGGAGGAAGCGGGCGCAGGAGGCCGCGGAGCGACGCGGGGCCCGAGGACGACGACTTGTCCAAGGTCGTCTCCACCTCCGCCGCCTCCGGCGGCGGCGGCGGCGGCGGGCAGGACTCGGATGCTCCAGAAGCAAAACGTTTGAAACCAATGAAATCTAGTGATAAGAATGATAGTTTAAGGACAGAAGCTGGAACCGATTCAGGAAACAGCAGTAAGGCTGCTGATAAAAATGCTACACCACCAGAGCCACCAAAACAAGACTACATTCATGTGAGGGCAAGAAGAGGTCAAGCAACCGATAGCCATAGCCTTGCGGAGCGGGCACGGCGAGAGAAGATAAGTGAACGGATGAAAATTCTTCAAGATCTTGTCCCTGGATGCAATAAGGTCATTGGGAAAGCATCAGTCCTTGATGAAATAATAAATTACATCCAGTCTTTACAGCATCAAGTTGAGTTTTTGTCCATGAAGCTTGAAGCAGTTAATAGTCACATGATTAACGGAATTGTTGCTTTTCCATCTAAAGATTTTGGTGCTCAGCCATATAACACAGCTGCTGGTTTGACATTTGATCCACAAACAACAAGGGAATTTGCCCAGGGTTCAACATCAGAGTGGCTTCACATGCAGATTGGAAATGCATATGAAAGAGTGACATGA
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| Protein seq | MDPAPSLAAELWRPHHHRHHFEASSVVTDQGSGSRGGGGSGRRRPRSDAGPEDDDLSKVVSTSAASGGGGGGGQDSDAPEAKRLKPMKSSDKNDSLRTEAGTDSGNSSKAADKNATPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQSLQHQVEFLSMKLEAVNSHMINGIVAFPSKDFGAQPYNTAAGLTFDPQTTREFAQGSTSEWLHMQIGNAYERVT |
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| Function | Transcription factor BHLH094 [UniProtKB/Swiss-Prot:Q69WS3] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os07g09590 | LOC_Os07g09590.1 | Chr07 | 5082119 | 5084790 | - | MSU_osa1r7 | ||
| CDS seq | ATGGACCCGGCCCCCTCGCTCGCGGCGGAGCTCTGGCGGCCGCATCACCACCGCCACCACTTCGAGGCGTCGTCCGTCGTCACCGACCAGGGGAGCGGAAGCCGCGGCGGAGGAGGAAGCGGGCGCAGGAGGCCGCGGAGCGACGCGGGGCCCGAGGACGACGACTTGTCCAAGGTCGTCTCCACCTCCGCCGCCTCCGGCGGCGGCGGCGGCGGCGGGCAGGACTCGGATGCTCCAGAAGCAAAACGTTTGAAACCAATGAAATCTAGTGATAAGAATGATAGTTTAAGGACAGAAGCTGGAACCGATTCAGGAAACAGCAGTAAGGCTGCTGATAAAAATGCTACACCACCAGAGCCACCAAAACAAGACTACATTCATGTGAGGGCAAGAAGAGGTCAAGCAACCGATAGCCATAGCCTTGCGGAGCGGGCACGGCGAGAGAAGATAAGTGAACGGATGAAAATTCTTCAAGATCTTGTCCCTGGATGCAATAAGGTCATTGGGAAAGCATCAGTCCTTGATGAAATAATAAATTACATCCAGTCTTTACAGCATCAAGTTGAGTTTTTGTCCATGAAGCTTGAAGCAGTTAATAGTCACATGATTAACGGAATTGTTGCTTTTCCATCTAAAGATTTTGGTGCTCAGCCATATAACACAGCTGCTGGTTTGACATTTGATCCACAAACAACAAGGGAATTTGCCCAGGGTTCAACATCAGAGTGGCTTCACATGCAGATTGGAAATGCATATGAAAGAGTGACATGA
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| Protein seq | MDPAPSLAAELWRPHHHRHHFEASSVVTDQGSGSRGGGGSGRRRPRSDAGPEDDDLSKVVSTSAASGGGGGGGQDSDAPEAKRLKPMKSSDKNDSLRTEAGTDSGNSSKAADKNATPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQSLQHQVEFLSMKLEAVNSHMINGIVAFPSKDFGAQPYNTAAGLTFDPQTTREFAQGSTSEWLHMQIGNAYERVT
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_07g0193800 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g58830 | RBH | 0.0 | 0.0 | 0.538783 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os07g0193800 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0006060 | RBH | 0.0 | 0.000000 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0006020 | RBH | 0.0 | 0.0 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_07g0005930 | RBH | 0.0 | 1.268180 | 0.564929 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_07g0005850 | RBH | 0.0 | 0.200986 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0006030 | RBH | 0.0 | 0.0 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0085300 | RBH | 1.368817 | 1.1772425 | 2.8553555 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0006520 | RBH | 0.0 | 0.905049 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0087200 | RBH | 0.9794715 | 0.329463 | 7.9239595 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_07g0005950 | RBH | 0.046755 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0005950 | RBH | 0.0 | 9.013337 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0006000 | RBH | 0.0 | 7.867301 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_07g0006130 | RBH | 0.0 | 0.203692 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_07g0005960 | RBH | 0.0 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G006150 | RBH | 0.0 | 2.762433 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0005940 | RBH | 0.0 | 0.000000 | 0.0 |
