Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os07g05740 | OGI:07007860 | 16/16 | Nipponbare | IRGSP 1.0 | MSU | Chr07:2757219-2761925 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | TTTTTCCAAGGTACTGTGATTTATTTCCATTTATTTTGTTTTACAGTAAGTTGGCAAGGTCAAAGAGAGGAAAAATCACTGTAGTCAAGAAATTAAGAGCAAGAAAAAAAATCAGTAGATTAATTTGTTATATTTATTATGAGCTCAATATATATACTGTTTAAGTATGTACAATGCAGTGTGTTGCTACTGAACTTTATCAGGGTAGTAAAGTAGATCTTTGTGGACTGATGAACTGAACCTATCTCTGCCTATTTGGAGTGTTTCATAAAGGGAACACTCCAAACTCTGAAATATCTTCCTCCACTGCAGGGTAGTCACTGAAGTTAACTGGACTACTTCAGATCCTTTAACCGATGGTTAATCTTGGTCAGAACGACAGATTTCTTGTTCAAACTGAGGTTAGATTATATCCACAGCTTCTTGGAGCACAACAATAACACATAACCTAGAGGTTCCTCAACTAAGATCTCAGTTAAGTTGTGGATGCTCCCTTGCTAGTTTATACTCAGCTGGTAAAAAAGAATTGAAGACACTAGCCTGCCAAACAAGAAAACAAGCAACTGGTTAGCATATAATGTTGTCCAACTGGTAGTAAATTAATGCGCCGAAAATTATTTCTGGTATAAGTGGCTGAAAACTTGGTGATGATGCATATATTTTGTAGCTCTTACAAGACGTCCTATGAGCCTATGGACTGACAATATGCAATTTTTCTGTAGTAATGTTTCAGTTTCATGCACAACCAATTACTTGACAAGGTTGATCTGTTGGAACTGAAAAAAATAATAGTATAATTGTATTTTGCGCTAAAACAATGTAGCCGCTACCTGATACTATCGTTAACTATAGAATGAAAATAAATCATAGGCAAGATCAATGACAGGCTGCTTATTCAATAATTCTCATCTCACCTCTAATGTTTAAGAGAAGAATCATCTTCTATAGGCGCCTCCGATGCTGGAGACGAAAAAGAATCATAAGCAGAGGCTCTGGCATCCATCAGCATTGATATTACTTCACGCATGCTAGGCCTATCTAGTGGCGACTCGCTGGTGCAGAACAATGCAATCTTCAGAACCAGTGAAATTTCTTCCAGAACCCTCCTTGAGTTCAGATTCAGCCTGCTGTCAAAAATTTCAGAATTTGTTGTCGAACTGTTTGTCATCCGCCTCACTAGATTGACAAGATCCCCTCCTTGCTCAAGAGGTTGAATCGGAGATTGTCCCGTCACTAGCTCCAACAAGACTACCCCGAAGCTATAAATGTCACATTTTTCAGTCACCTTCATGGTAAAAGCATACTCTGCATTACCATAAGAATCATGGAATTAGAGCTTTAGCAGTTAAAACAACTAAACAAACTATAAATTACCACTGTATGGTATAAAGACCAAGTGAAACTATTTGACTTGATGGTATAAATAATTCTGAACTTTTAACCTAACATGGTGAGTCAGTAGCATATCTAACCTGGTGCAATGTAGCCATATGAACCGGCAATAGCAGACATTGTTCTGGAGTTGGAAATATCAATCAGTTTTGCCAAGCCAAAGTCCCCTACATGAGCCTCCATCATTTCATCAAGCAATATGTTGTTCGATTTTATGTCACGGTGAATCACCTTCGGTTTGCAGTCACTGTGAAGATACCTCAGACCTTCCGCAGCCCCGAGAGCGATCCGATAACGGGTGTCCCAGTCCAGTAGACACACATCCTTGCTACCATGAAGCAACTCTCCAAGGCTACCATTTGCCATGTACTCATACAGGATAAGATTGCAGTCCTGATTGGAGCAGAAACCATACAGCTTGACAATGTTCCGGTGCCTGACATTTCCGAGTGTGGTTATCTCAGCTCGAAAGCTTCTATCGACATTGGAACCTTCTCCCTGGCACTTCAGCTTCTTCACTGCAACCCTTCTCCCATCAGGCATGATAGCCTTATAGACAGTGCCACAAGCACCCCTTCCAATTACGGCACTCTCTGAGAAGCTGTCGGTCACCTTCATAAGCTCCTGAAAGGTTATCCGTTCCTTCAGGAAGTAGTGAGGACCTGAAAACCCAGTCTTGCGCTCTTCGTTCGATACAAGATCAGGTATCTTGGATTTCAAGGACCAGCAAACGACTGCGATCAACACCAATGAGACAAACGCGATAACAATGGAGGAAATGCTGATGATCTTCTCCCTGAGAAGCCGCTTCTTCTGCACCGCTGCTTCCCTGCTTGCATAGGCTGACCCTGATAATCCTGAACATGATTTCCCTTTGATACCACAAAGGCCATTGTTTCCCAGGAAATTGCTGCTGTCCATGTGCTGGAACAGCGTGGTGCTGGGAAGCGGCCCGGCAAGATTGTTGTAAGAAAGGTTGCACTCCAGCAGACTCGAGAGCTCTCCGAATGAGGAAGGGACTTCACCTTCTAGCTCATTGTTGTTCAAGTAAAGGAACTCCAGCATGTGCAAGTTTCCTAGTTGAGTCGGGATCTCACCAGATAGCATGTTGTAACTGACATTCAGCGCAATCTGGAGCGCAGTGAGCTGGCCAAGCTCGACCGGCAATTGGCCGGACAAGCGGTTGCCTCCCATCTGCAGCTCGGTGAGCCGGGAAAGGCCTCCGAAACTGCTTGGTACGGTTCCATTCAGACTATTGTCAGATAGCTTCAGTTGCTCCAGGTTCACCAGTGTGCCAAGCTCCTGAGGAATGACTCCAGTGAGGGAGTTCTTACTCAGATCAAGCCTCTGGAGCTTTGTACACCGCGCCAGCTCCCGAGGAATCGGTCCGGTGAGCTGGTTCGACGATATATTGAAGGCGACAAGCTTGGTGAGGTTGCCAATGCCAGGAGGGATCTGCCCAACAAAGTAATTCTCCGACAAAATCAGCCTCTCTATGCTCCTGAACTTGCCGATCTCGGGTGGTATCGGTCCCGAGAACCGGTTCCGGTTCATGTCAAGCGACGACAGGTTCCGCAGCAGCGAAAGCTCGACGGGGAGGCTCCCGGTGAGCATGTTCCCCCCCAATTGGAGCTGTGTCAATGTCCTACAAGCCTTCACGCCCGGGGGGATGTTGCCGATGAGGCGGTTCGATCCGAGGCTCAAGAAGATGAGCTTCTGGAACTTGCAAAGGTGAGGTGGGATGCTCCCCGTCAGCCGATTATCCGACAAATCGAGCACCGAAAGGTTGCTGCCTGCACCAAGCATAGGAGGGATGACACCATGGATTTGGTTGTCGAACAGCTGCAGGTACTCCAAATCGGTGAGGTTCTGAAACTCCATTGGAATTGTGCCGGTGAGGTTGTTGATGGACAGATCAATCCTCCTGATGACGGTGAGCTCGCCGAGCTCCGGTGGGATGCTTCCTTGCAACCTGTTCTCGAAGAGGTAGAGCAGCCGGAGCGTCGGAATCCGGCCGAGCTCGCCGGGGATGACGCCGGTGAGCTTGTTCTCCGAGAGGTCGATCTCGACGGCGCTCTGGAGGTCGCCGAGCTCCCTTGGGATGGTGCCGTCGAGCTGGTTCCGGTAAATGTAGAGCTTGGCGAGGGATGGCAGCGCGCCGAGCTCCCTGGGGACGCCGCCGGTGAAGGCGTTGTCGTTGAGGGCGAGCATCTCGAGGCTGGGGATGTCGCCGAGCTCCGGCGGGATCTCGCCGGAGAGGGCGTTCTGCCAGAGGATCAATGTGGTGAGGTTCTTGAGGCGGGAGAGCTCGCCGGGGAGCTCGCCGGCGAGGTTGTTCTGGGCGAGGCCGAGCACGGCGAGGCTGGCGCACGCGCTGATCTCGACGGGGATCGGGCCGGAGAGGTCGTTGAGCCCTGCGCGGATGATGCGGAGGCGCTGGAGCGCCGCGATGGTGGTCGGGATCCCGCCGGTGAGGTTGTTGCTGTAGATTTCGAGCTCCTCGAGGGCGGTGAGGTTGCCGATGGCCGCCGGGATCTCGCCGGACAGGAAGTTCTCGCTGAGGAACAGCTGGCGGAGGGACGGGAGGGAGCAGAGCGACGGCGGGATGCCGCCGTGGAGGGAGTTGGTGCTGAGGTCGAGCACCTCGAGGGCGCGGCACGCGGCGAGGCCGGGCGGGAGCGCGCCGGCGAGCGCGTTCTTGGACACGTTGAGGACGGCGAGGCGCGGGAGCGCGCACACGGCGGCGGAGAGCTCGCCGTGGAGGTTGAGGCCGTGGAGCGTCACCGCGGTGACCTCCATCGCGGCGGAGCAGGCAATGCCGGGCCACCCGCACGGGTCGCCGCCGCCGCTGCCGCCCGCCGCGTCCCAGCTCGAGAGGCGCCCGTCCACGTCGTCCAGCTTGGTCTTGAACTCCATCAACGCCGCCACCGCCGCCGCCGACGACGACGCCGCGGCGGCGGCAGCGACAGCGGCAAAGAAGACCGCCGCCGCGAGCAACACCCTCGCCACGGATGCCGCCATTGCCGCAACAACCGAGCTCAACCTCGAACGAAAAACGAGCAAAACACGCGCACCGCCTCTACGCCAAGAAACAGCGCGCCATGGATGGACGCACACGCACAGAGAGCAGCAGCCAAGAAGGCGAGCGCCCCCACCCCCCCAACCCCACTAGGCCACCACCACCCAGCAAGCGGGGACAGTCTCACCCAGCCATGGGTGGTGGCACTAGTCGCCCGCGCAATCGGGATGCACAACACGATGGTGGTGGTGGTGGCGGCGACTGAAGTGAGTGGGCGCTGCAGGGGAGAGAGAGAG
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| CDS seq | ATGGCGGCATCCGTGGCGAGGGTGTTGCTCGCGGCGGCGGTCTTCTTTGCCGCTGTCGCTGCCGCCGCCGCGGCGTCGTCGTCGGCGGCGGCGGTGGCGGCGTTGATGGAGTTCAAGACCAAGCTGGACGACGTGGACGGGCGCCTCTCGAGCTGGGACGCGGCGGGCGGCAGCGGCGGCGGCGACCCGTGCGGGTGGCCCGGCATTGCCTGCTCCGCCGCGATGGAGGTCACCGCGGTGACGCTCCACGGCCTCAACCTCCACGGCGAGCTCTCCGCCGCCGTGTGCGCGCTCCCGCGCCTCGCCGTCCTCAACGTGTCCAAGAACGCGCTCGCCGGCGCGCTCCCGCCCGGCCTCGCCGCGTGCCGCGCCCTCGAGGTGCTCGACCTCAGCACCAACTCCCTCCACGGCGGCATCCCGCCGTCGCTCTGCTCCCTCCCGTCCCTCCGCCAGCTGTTCCTCAGCGAGAACTTCCTGTCCGGCGAGATCCCGGCGGCCATCGGCAACCTCACCGCCCTCGAGGAGCTCGAAATCTACAGCAACAACCTCACCGGCGGGATCCCGACCACCATCGCGGCGCTCCAGCGCCTCCGCATCATCCGCGCAGGGCTCAACGACCTCTCCGGCCCGATCCCCGTCGAGATCAGCGCGTGCGCCAGCCTCGCCGTGCTCGGCCTCGCCCAGAACAACCTCGCCGGCGAGCTCCCCGGCGAGCTCTCCCGCCTCAAGAACCTCACCACATTGATCCTCTGGCAGAACGCCCTCTCCGGCGAGATCCCGCCGGAGCTCGGCGACATCCCCAGCCTCGAGATGCTCGCCCTCAACGACAACGCCTTCACCGGCGGCGTCCCCAGGGAGCTCGGCGCGCTGCCATCCCTCGCCAAGCTCTACATTTACCGGAACCAGCTCGACGGCACCATCCCAAGGGAGCTCGGCGACCTCCAGAGCGCCGTCGAGATCGACCTCTCGGAGAACAAGCTCACCGGCGTCATCCCCGGCGAGCTCGGCCGGATTCCGACGCTCCGGCTGCTCTACCTCTTCGAGAACAGGTTGCAAGGAAGCATCCCACCGGAGCTCGGCGAGCTCACCGTCATCAGGAGGATTGATCTGTCCATCAACAACCTCACCGGCACAATTCCAATGGAGTTTCAGAACCTCACCGATTTGGAGTACCTGCAGCTGTTCGACAACCAAATCCATGGTGTCATCCCTCCTATGCTTGGTGCAGGCAGCAACCTTTCGGTGCTCGATTTGTCGGATAATCGGCTGACGGGGAGCATCCCACCTCACCTTTGCAAGTTCCAGAAGCTCATCTTCTTGAGCCTCGGATCGAACCGCCTCATCGGCAACATCCCCCCGGGCGTGAAGGCTTGTAGGACATTGACACAGCTCCAATTGGGGGGGAACATGCTCACCGGGAGCCTCCCCGTCGAGCTTTCGCTGCTGCGGAACCTGTCGTCGCTTGACATGAACCGGAACCGGTTCTCGGGACCGATACCACCCGAGATCGGCAAGTTCAGGAGCATAGAGAGGCTGATTTTGTCGGAGAATTACTTTGTTGGGCAGATCCCTCCTGGCATTGGCAACCTCACCAAGCTTGTCGCCTTCAATATATCGTCGAACCAGCTCACCGGACCGATTCCTCGGGAGCTGGCGCGGTGTACAAAGCTCCAGAGGCTTGATCTGAGTAAGAACTCCCTCACTGGAGTCATTCCTCAGGAGCTTGGCACACTGGTGAACCTGGAGCAACTGAAGCTATCTGACAATAGTCTGAATGGAACCGTACCAAGCAGTTTCGGAGGCCTTTCCCGGCTCACCGAGCTGCAGATGGGAGGCAACCGCTTGTCCGGCCAATTGCCGGTCGAGCTTGGCCAGCTCACTGCGCTCCAGATTGCGCTGAATGTCAGTTACAACATGCTATCTGGTGAGATCCCGACTCAACTAGGAAACTTGCACATGCTGGAGTTCCTTTACTTGAACAACAATGAGCTAGAAGGTGAAGTCCCTTCCTCATTCGGAGAGCTCTCGAGTCTGCTGGAGTGCAACCTTTCTTACAACAATCTTGCCGGGCCGCTTCCCAGCACCACGCTGTTCCAGCACATGGACAGCAGCAATTTCCTGGGAAACAATGGCCTTTGTGGTATCAAAGGGAAATCATGTTCAGGATTATCAGGGTCAGCCTATGCAAGCAGGGAAGCAGCGGTGCAGAAGAAGCGGCTTCTCAGGGAGAAGATCATCAGCATTTCCTCCATTGTTATCGCGTTTGTCTCATTGGTGTTGATCGCAGTCGTTTGCTGGTCCTTGAAATCCAAGATACCTGATCTTGTATCGAACGAAGAGCGCAAGACTGGGTTTTCAGGTCCTCACTACTTCCTGAAGGAACGGATAACCTTTCAGGAGCTTATGAAGGTGACCGACAGCTTCTCAGAGAGTGCCGTAATTGGAAGGGGTGCTTGTGGCACTGTCTATAAGGCTATCATGCCTGATGGGAGAAGGGTTGCAGTGAAGAAGCTGAAGTGCCAGGGAGAAGGTTCCAATGTCGATAGAAGCTTTCGAGCTGAGATAACCACACTCGGAAATGTCAGGCACCGGAACATTGTCAAGCTGTATGGTTTCTGCTCCAATCAGGACTGCAATCTTATCCTGTATGAGTACATGGCAAATGGTAGCCTTGGAGAGTTGCTTCATGGTAGCAAGGATGTGTGTCTACTGGACTGGGACACCCGTTATCGGATCGCTCTCGGGGCTGCGGAAGGTCTGAGGTATCTTCACAGTGACTGCAAACCGAAGGTGATTCACCGTGACATAAAATCGAACAACATATTGCTTGATGAAATGATGGAGGCTCATGTAGGGGACTTTGGCTTGGCAAAACTGATTGATATTTCCAACTCCAGAACAATGTCTGCTATTGCCGGTTCATATGGCTACATTGCACCAGAGTATGCTTTTACCATGAAGGTGACTGAAAAATGTGACATTTATAGCTTCGGGGTAGTCTTGTTGGAGCTAGTGACGGGACAATCTCCGATTCAACCTCTTGAGCAAGGAGGGGATCTTGTCAATCTAGTGAGGCGGATGACAAACAGTTCGACAACAAATTCTGAAATTTTTGACAGCAGGCTGAATCTGAACTCAAGGAGGGTTCTGGAAGAAATTTCACTGGTTCTGAAGATTGCATTGTTCTGCACCAGCGAGTCGCCACTAGATAGGCCTAGCATGCGTGAAGTAATATCAATGCTGATGGATGCCAGAGCCTCTGCTTATGATTCTTTTTCGTCTCCAGCATCGGAGGCGCCTATAGAAGATGATTCTTCTCTTAAACATTAG
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| Protein seq | MAASVARVLLAAAVFFAAVAAAAAASSSAAAVAALMEFKTKLDDVDGRLSSWDAAGGSGGGDPCGWPGIACSAAMEVTAVTLHGLNLHGELSAAVCALPRLAVLNVSKNALAGALPPGLAACRALEVLDLSTNSLHGGIPPSLCSLPSLRQLFLSENFLSGEIPAAIGNLTALEELEIYSNNLTGGIPTTIAALQRLRIIRAGLNDLSGPIPVEISACASLAVLGLAQNNLAGELPGELSRLKNLTTLILWQNALSGEIPPELGDIPSLEMLALNDNAFTGGVPRELGALPSLAKLYIYRNQLDGTIPRELGDLQSAVEIDLSENKLTGVIPGELGRIPTLRLLYLFENRLQGSIPPELGELTVIRRIDLSINNLTGTIPMEFQNLTDLEYLQLFDNQIHGVIPPMLGAGSNLSVLDLSDNRLTGSIPPHLCKFQKLIFLSLGSNRLIGNIPPGVKACRTLTQLQLGGNMLTGSLPVELSLLRNLSSLDMNRNRFSGPIPPEIGKFRSIERLILSENYFVGQIPPGIGNLTKLVAFNISSNQLTGPIPRELARCTKLQRLDLSKNSLTGVIPQELGTLVNLEQLKLSDNSLNGTVPSSFGGLSRLTELQMGGNRLSGQLPVELGQLTALQIALNVSYNMLSGEIPTQLGNLHMLEFLYLNNNELEGEVPSSFGELSSLLECNLSYNNLAGPLPSTTLFQHMDSSNFLGNNGLCGIKGKSCSGLSGSAYASREAAVQKKRLLREKIISISSIVIAFVSLVLIAVVCWSLKSKIPDLVSNEERKTGFSGPHYFLKERITFQELMKVTDSFSESAVIGRGACGTVYKAIMPDGRRVAVKKLKCQGEGSNVDRSFRAEITTLGNVRHRNIVKLYGFCSNQDCNLILYEYMANGSLGELLHGSKDVCLLDWDTRYRIALGAAEGLRYLHSDCKPKVIHRDIKSNNILLDEMMEAHVGDFGLAKLIDISNSRTMSAIAGSYGYIAPEYAFTMKVTEKCDIYSFGVVLLELVTGQSPIQPLEQGGDLVNLVRRMTNSSTTNSEIFDSRLNLNSRRVLEEISLVLKIALFCTSESPLDRPSMREVISMLMDARASAYDSFSSPASEAPIEDDSSLKH |
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| Function | Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 [UniProtKB/Swiss-Prot:Q9SHI2] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os07g05740 | LOC_Os07g05740.1 | Chr07 | 2757219 | 2761922 | - | MSU_osa1r7 | ||
| CDS seq | ATGGCGGCATCCGTGGCGAGGGTGTTGCTCGCGGCGGCGGTCTTCTTTGCCGCTGTCGCTGCCGCCGCCGCGGCGTCGTCGTCGGCGGCGGCGGTGGCGGCGTTGATGGAGTTCAAGACCAAGCTGGACGACGTGGACGGGCGCCTCTCGAGCTGGGACGCGGCGGGCGGCAGCGGCGGCGGCGACCCGTGCGGGTGGCCCGGCATTGCCTGCTCCGCCGCGATGGAGGTCACCGCGGTGACGCTCCACGGCCTCAACCTCCACGGCGAGCTCTCCGCCGCCGTGTGCGCGCTCCCGCGCCTCGCCGTCCTCAACGTGTCCAAGAACGCGCTCGCCGGCGCGCTCCCGCCCGGCCTCGCCGCGTGCCGCGCCCTCGAGGTGCTCGACCTCAGCACCAACTCCCTCCACGGCGGCATCCCGCCGTCGCTCTGCTCCCTCCCGTCCCTCCGCCAGCTGTTCCTCAGCGAGAACTTCCTGTCCGGCGAGATCCCGGCGGCCATCGGCAACCTCACCGCCCTCGAGGAGCTCGAAATCTACAGCAACAACCTCACCGGCGGGATCCCGACCACCATCGCGGCGCTCCAGCGCCTCCGCATCATCCGCGCAGGGCTCAACGACCTCTCCGGCCCGATCCCCGTCGAGATCAGCGCGTGCGCCAGCCTCGCCGTGCTCGGCCTCGCCCAGAACAACCTCGCCGGCGAGCTCCCCGGCGAGCTCTCCCGCCTCAAGAACCTCACCACATTGATCCTCTGGCAGAACGCCCTCTCCGGCGAGATCCCGCCGGAGCTCGGCGACATCCCCAGCCTCGAGATGCTCGCCCTCAACGACAACGCCTTCACCGGCGGCGTCCCCAGGGAGCTCGGCGCGCTGCCATCCCTCGCCAAGCTCTACATTTACCGGAACCAGCTCGACGGCACCATCCCAAGGGAGCTCGGCGACCTCCAGAGCGCCGTCGAGATCGACCTCTCGGAGAACAAGCTCACCGGCGTCATCCCCGGCGAGCTCGGCCGGATTCCGACGCTCCGGCTGCTCTACCTCTTCGAGAACAGGTTGCAAGGAAGCATCCCACCGGAGCTCGGCGAGCTCACCGTCATCAGGAGGATTGATCTGTCCATCAACAACCTCACCGGCACAATTCCAATGGAGTTTCAGAACCTCACCGATTTGGAGTACCTGCAGCTGTTCGACAACCAAATCCATGGTGTCATCCCTCCTATGCTTGGTGCAGGCAGCAACCTTTCGGTGCTCGATTTGTCGGATAATCGGCTGACGGGGAGCATCCCACCTCACCTTTGCAAGTTCCAGAAGCTCATCTTCTTGAGCCTCGGATCGAACCGCCTCATCGGCAACATCCCCCCGGGCGTGAAGGCTTGTAGGACATTGACACAGCTCCAATTGGGGGGGAACATGCTCACCGGGAGCCTCCCCGTCGAGCTTTCGCTGCTGCGGAACCTGTCGTCGCTTGACATGAACCGGAACCGGTTCTCGGGACCGATACCACCCGAGATCGGCAAGTTCAGGAGCATAGAGAGGCTGATTTTGTCGGAGAATTACTTTGTTGGGCAGATCCCTCCTGGCATTGGCAACCTCACCAAGCTTGTCGCCTTCAATATATCGTCGAACCAGCTCACCGGACCGATTCCTCGGGAGCTGGCGCGGTGTACAAAGCTCCAGAGGCTTGATCTGAGTAAGAACTCCCTCACTGGAGTCATTCCTCAGGAGCTTGGCACACTGGTGAACCTGGAGCAACTGAAGCTATCTGACAATAGTCTGAATGGAACCGTACCAAGCAGTTTCGGAGGCCTTTCCCGGCTCACCGAGCTGCAGATGGGAGGCAACCGCTTGTCCGGCCAATTGCCGGTCGAGCTTGGCCAGCTCACTGCGCTCCAGATTGCGCTGAATGTCAGTTACAACATGCTATCTGGTGAGATCCCGACTCAACTAGGAAACTTGCACATGCTGGAGTTCCTTTACTTGAACAACAATGAGCTAGAAGGTGAAGTCCCTTCCTCATTCGGAGAGCTCTCGAGTCTGCTGGAGTGCAACCTTTCTTACAACAATCTTGCCGGGCCGCTTCCCAGCACCACGCTGTTCCAGCACATGGACAGCAGCAATTTCCTGGGAAACAATGGCCTTTGTGGTATCAAAGGGAAATCATGTTCAGGATTATCAGGGTCAGCCTATGCAAGCAGGGAAGCAGCGGTGCAGAAGAAGCGGCTTCTCAGGGAGAAGATCATCAGCATTTCCTCCATTGTTATCGCGTTTGTCTCATTGGTGTTGATCGCAGTCGTTTGCTGGTCCTTGAAATCCAAGATACCTGATCTTGTATCGAACGAAGAGCGCAAGACTGGGTTTTCAGGTCCTCACTACTTCCTGAAGGAACGGATAACCTTTCAGGAGCTTATGAAGGTGACCGACAGCTTCTCAGAGAGTGCCGTAATTGGAAGGGGTGCTTGTGGCACTGTCTATAAGGCTATCATGCCTGATGGGAGAAGGGTTGCAGTGAAGAAGCTGAAGTGCCAGGGAGAAGGTTCCAATGTCGATAGAAGCTTTCGAGCTGAGATAACCACACTCGGAAATGTCAGGCACCGGAACATTGTCAAGCTGTATGGTTTCTGCTCCAATCAGGACTGCAATCTTATCCTGTATGAGTACATGGCAAATGGTAGCCTTGGAGAGTTGCTTCATGGTAGCAAGGATGTGTGTCTACTGGACTGGGACACCCGTTATCGGATCGCTCTCGGGGCTGCGGAAGGTCTGAGGTATCTTCACAGTGACTGCAAACCGAAGGTGATTCACCGTGACATAAAATCGAACAACATATTGCTTGATGAAATGATGGAGGCTCATGTAGGGGACTTTGGCTTGGCAAAACTGATTGATATTTCCAACTCCAGAACAATGTCTGCTATTGCCGGTTCATATGGCTACATTGCACCAGAGTATGCTTTTACCATGAAGGTGACTGAAAAATGTGACATTTATAGCTTCGGGGTAGTCTTGTTGGAGCTAGTGACGGGACAATCTCCGATTCAACCTCTTGAGCAAGGAGGGGATCTTGTCAATCTAGTGAGGCGGATGACAAACAGTTCGACAACAAATTCTGAAATTTTTGACAGCAGGCTGAATCTGAACTCAAGGAGGGTTCTGGAAGAAATTTCACTGGTTCTGAAGATTGCATTGTTCTGCACCAGCGAGTCGCCACTAGATAGGCCTAGCATGCGTGAAGTAATATCAATGCTGATGGATGCCAGAGCCTCTGCTTATGATTCTTTTTCGTCTCCAGCATCGGAGGCGCCTATAGAAGATGATTCTTCTCTTAAACATTAG
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| Protein seq | MAASVARVLLAAAVFFAAVAAAAAASSSAAAVAALMEFKTKLDDVDGRLSSWDAAGGSGGGDPCGWPGIACSAAMEVTAVTLHGLNLHGELSAAVCALPRLAVLNVSKNALAGALPPGLAACRALEVLDLSTNSLHGGIPPSLCSLPSLRQLFLSENFLSGEIPAAIGNLTALEELEIYSNNLTGGIPTTIAALQRLRIIRAGLNDLSGPIPVEISACASLAVLGLAQNNLAGELPGELSRLKNLTTLILWQNALSGEIPPELGDIPSLEMLALNDNAFTGGVPRELGALPSLAKLYIYRNQLDGTIPRELGDLQSAVEIDLSENKLTGVIPGELGRIPTLRLLYLFENRLQGSIPPELGELTVIRRIDLSINNLTGTIPMEFQNLTDLEYLQLFDNQIHGVIPPMLGAGSNLSVLDLSDNRLTGSIPPHLCKFQKLIFLSLGSNRLIGNIPPGVKACRTLTQLQLGGNMLTGSLPVELSLLRNLSSLDMNRNRFSGPIPPEIGKFRSIERLILSENYFVGQIPPGIGNLTKLVAFNISSNQLTGPIPRELARCTKLQRLDLSKNSLTGVIPQELGTLVNLEQLKLSDNSLNGTVPSSFGGLSRLTELQMGGNRLSGQLPVELGQLTALQIALNVSYNMLSGEIPTQLGNLHMLEFLYLNNNELEGEVPSSFGELSSLLECNLSYNNLAGPLPSTTLFQHMDSSNFLGNNGLCGIKGKSCSGLSGSAYASREAAVQKKRLLREKIISISSIVIAFVSLVLIAVVCWSLKSKIPDLVSNEERKTGFSGPHYFLKERITFQELMKVTDSFSESAVIGRGACGTVYKAIMPDGRRVAVKKLKCQGEGSNVDRSFRAEITTLGNVRHRNIVKLYGFCSNQDCNLILYEYMANGSLGELLHGSKDVCLLDWDTRYRIALGAAEGLRYLHSDCKPKVIHRDIKSNNILLDEMMEAHVGDFGLAKLIDISNSRTMSAIAGSYGYIAPEYAFTMKVTEKCDIYSFGVVLLELVTGQSPIQPLEQGGDLVNLVRRMTNSSTTNSEIFDSRLNLNSRRVLEEISLVLKIALFCTSESPLDRPSMREVISMLMDARASAYDSFSSPASEAPIEDDSSLKH
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os07g05740 | LOC_Os07g05740.2 | Chr07 | 2757224 | 2761925 | - | MSU_osa1r7 | ||
| CDS seq | ATGGCGGCATCCGTGGCGAGGGTGTTGCTCGCGGCGGCGGTCTTCTTTGCCGCTGTCGCTGCCGCCGCCGCGGCGTCGTCGTCGGCGGCGGCGGTGGCGGCGTTGATGGAGTTCAAGACCAAGCTGGACGACGTGGACGGGCGCCTCTCGAGCTGGGACGCGGCGGGCGGCAGCGGCGGCGGCGACCCGTGCGGGTGGCCCGGCATTGCCTGCTCCGCCGCGATGGAGGTCACCGCGGTGACGCTCCACGGCCTCAACCTCCACGGCGAGCTCTCCGCCGCCGTGTGCGCGCTCCCGCGCCTCGCCGTCCTCAACGTGTCCAAGAACGCGCTCGCCGGCGCGCTCCCGCCCGGCCTCGCCGCGTGCCGCGCCCTCGAGGTGCTCGACCTCAGCACCAACTCCCTCCACGGCGGCATCCCGCCGTCGCTCTGCTCCCTCCCGTCCCTCCGCCAGCTGTTCCTCAGCGAGAACTTCCTGTCCGGCGAGATCCCGGCGGCCATCGGCAACCTCACCGCCCTCGAGGAGCTCGAAATCTACAGCAACAACCTCACCGGCGGGATCCCGACCACCATCGCGGCGCTCCAGCGCCTCCGCATCATCCGCGCAGGGCTCAACGACCTCTCCGGCCCGATCCCCGTCGAGATCAGCGCGTGCGCCAGCCTCGCCGTGCTCGGCCTCGCCCAGAACAACCTCGCCGGCGAGCTCCCCGGCGAGCTCTCCCGCCTCAAGAACCTCACCACATTGATCCTCTGGCAGAACGCCCTCTCCGGCGAGATCCCGCCGGAGCTCGGCGACATCCCCAGCCTCGAGATGCTCGCCCTCAACGACAACGCCTTCACCGGCGGCGTCCCCAGGGAGCTCGGCGCGCTGCCATCCCTCGCCAAGCTCTACATTTACCGGAACCAGCTCGACGGCACCATCCCAAGGGAGCTCGGCGACCTCCAGAGCGCCGTCGAGATCGACCTCTCGGAGAACAAGCTCACCGGCGTCATCCCCGGCGAGCTCGGCCGGATTCCGACGCTCCGGCTGCTCTACCTCTTCGAGAACAGGTTGCAAGGAAGCATCCCACCGGAGCTCGGCGAGCTCACCGTCATCAGGAGGATTGATCTGTCCATCAACAACCTCACCGGCACAATTCCAATGGAGTTTCAGAACCTCACCGATTTGGAGTACCTGCAGCTGTTCGACAACCAAATCCATGGTGTCATCCCTCCTATGCTTGGTGCAGGCAGCAACCTTTCGGTGCTCGATTTGTCGGATAATCGGCTGACGGGGAGCATCCCACCTCACCTTTGCAAGTTCCAGAAGCTCATCTTCTTGAGCCTCGGATCGAACCGCCTCATCGGCAACATCCCCCCGGGCGTGAAGGCTTGTAGGACATTGACACAGCTCCAATTGGGGGGGAACATGCTCACCGGGAGCCTCCCCGTCGAGCTTTCGCTGCTGCGGAACCTGTCGTCGCTTGACATGAACCGGAACCGGTTCTCGGGACCGATACCACCCGAGATCGGCAAGTTCAGGAGCATAGAGAGGCTGATTTTGTCGGAGAATTACTTTGTTGGGCAGATCCCTCCTGGCATTGGCAACCTCACCAAGCTTGTCGCCTTCAATATATCGTCGAACCAGCTCACCGGACCGATTCCTCGGGAGCTGGCGCGGTGTACAAAGCTCCAGAGGCTTGATCTGAGTAAGAACTCCCTCACTGGAGTCATTCCTCAGGAGCTTGGCACACTGGTGAACCTGGAGCAACTGAAGCTATCTGACAATAGTCTGAATGGAACCGTACCAAGCAGTTTCGGAGGCCTTTCCCGGCTCACCGAGCTGCAGATGGGAGGCAACCGCTTGTCCGGCCAATTGCCGGTCGAGCTTGGCCAGCTCACTGCGCTCCAGATTGCGCTGAATGTCAGTTACAACATGCTATCTGGTGAGATCCCGACTCAACTAGGAAACTTGCACATGCTGGAGTTCCTTTACTTGAACAACAATGAGCTAGAAGGTGAAGTCCCTTCCTCATTCGGAGAGCTCTCGAGTCTGCTGGAGTGCAACCTTTCTTACAACAATCTTGCCGGGCCGCTTCCCAGCACCACGCTGTTCCAGCACATGGACAGCAGCAATTTCCTGGGAAACAATGGCCTTTGTGGTATCAAAGGGAAATCATGTTCAGGATTATCAGGGTCAGCCTATGCAAGCAGGGAAGCAGCGGTGCAGAAGAAGCGGCTTCTCAGGGAGAAGATCATCAGCATTTCCTCCATTGTTATCGCGTTTGTCTCATTGGTGTTGATCGCAGTCGTTTGCTGGTCCTTGAAATCCAAGATACCTGATCTTGTATCGAACGAAGAGCGCAAGACTGGGTTTTCAGGTCCTCACTACTTCCTGAAGGAACGGATAACCTTTCAGGAGCTTATGAAGGTGACCGACAGCTTCTCAGAGAGTGCCGTAATTGGAAGGGGTGCTTGTGGCACTGTCTATAAGGCTATCATGCCTGATGGGAGAAGGGTTGCAGTGAAGAAGCTGAAGTGCCAGGGAGAAGGTTCCAATGTCGATAGAAGCTTTCGAGCTGAGATAACCACACTCGGAAATGTCAGGCACCGGAACATTGTCAAGCTGTATGGTTTCTGCTCCAATCAGGACTGCAATCTTATCCTGTATGAGTACATGGCAAATGGTAGCCTTGGAGAGTTGCTTCATGGTAGCAAGGATGTGTGTCTACTGGACTGGGACACCCGTTATCGGATCGCTCTCGGGGCTGCGGAAGGTCTGAGGTATCTTCACAGTGACTGCAAACCGAAGGTGATTCACCGTGACATAAAATCGAACAACATATTGCTTGATGAAATGATGGAGGCTCATGTAGGGGACTTTGGCTTGGCAAAACTGATTGATATTTCCAACTCCAGAACAATGTCTGCTATTGCCGGTTCATATGGCTACATTGCACCAGAGTATGCTTTTACCATGAAGGTGACTGAAAAATGTGACATTTATAGCTTCGGGGTAGTCTTGTTGGAGCTAGTGACGGGACAATCTCCGATTCAACCTCTTGAGCAAGGAGGGGATCTTGTCAATCTAGTGAGGCGGATGACAAACAGTTCGACAACAAATTCTGAAATTTTTGACAGCAGGCTGAATCTGAACTCAAGGAGGGTTCTGGAAGAAATTTCACTGGTTCTGAAGATTGCATTGTTCTGCACCAGCGAGTCGCCACTAGATAGGCCTAGCATGCGTGAAGTAATATCAATGCTGATGGATGCCAGAGCCTCTGCTTATGATTCTTTTTCGTCTCCAGCATCGGAGGCGCCTATAGAAGATGATTCTTCTCTTAAACATTAG
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| Protein seq | MAASVARVLLAAAVFFAAVAAAAAASSSAAAVAALMEFKTKLDDVDGRLSSWDAAGGSGGGDPCGWPGIACSAAMEVTAVTLHGLNLHGELSAAVCALPRLAVLNVSKNALAGALPPGLAACRALEVLDLSTNSLHGGIPPSLCSLPSLRQLFLSENFLSGEIPAAIGNLTALEELEIYSNNLTGGIPTTIAALQRLRIIRAGLNDLSGPIPVEISACASLAVLGLAQNNLAGELPGELSRLKNLTTLILWQNALSGEIPPELGDIPSLEMLALNDNAFTGGVPRELGALPSLAKLYIYRNQLDGTIPRELGDLQSAVEIDLSENKLTGVIPGELGRIPTLRLLYLFENRLQGSIPPELGELTVIRRIDLSINNLTGTIPMEFQNLTDLEYLQLFDNQIHGVIPPMLGAGSNLSVLDLSDNRLTGSIPPHLCKFQKLIFLSLGSNRLIGNIPPGVKACRTLTQLQLGGNMLTGSLPVELSLLRNLSSLDMNRNRFSGPIPPEIGKFRSIERLILSENYFVGQIPPGIGNLTKLVAFNISSNQLTGPIPRELARCTKLQRLDLSKNSLTGVIPQELGTLVNLEQLKLSDNSLNGTVPSSFGGLSRLTELQMGGNRLSGQLPVELGQLTALQIALNVSYNMLSGEIPTQLGNLHMLEFLYLNNNELEGEVPSSFGELSSLLECNLSYNNLAGPLPSTTLFQHMDSSNFLGNNGLCGIKGKSCSGLSGSAYASREAAVQKKRLLREKIISISSIVIAFVSLVLIAVVCWSLKSKIPDLVSNEERKTGFSGPHYFLKERITFQELMKVTDSFSESAVIGRGACGTVYKAIMPDGRRVAVKKLKCQGEGSNVDRSFRAEITTLGNVRHRNIVKLYGFCSNQDCNLILYEYMANGSLGELLHGSKDVCLLDWDTRYRIALGAAEGLRYLHSDCKPKVIHRDIKSNNILLDEMMEAHVGDFGLAKLIDISNSRTMSAIAGSYGYIAPEYAFTMKVTEKCDIYSFGVVLLELVTGQSPIQPLEQGGDLVNLVRRMTNSSTTNSEIFDSRLNLNSRRVLEEISLVLKIALFCTSESPLDRPSMREVISMLMDARASAYDSFSSPASEAPIEDDSSLKH
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.036406 | 0.122834 | 1.450417 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_07g0152200 | RBH | 0.000000 | 0.187255 | 5.042679 |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | Os07g0152200 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0003290 | RBH | 0.0 | 6.385621 | 3.816476 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0003300 | RBH | 0.0 | 1.432170 | 1.762081 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_07g0003190 | RBH | 0.0 | 1.196704 | 6.726915 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_07g0003120 | RBH | 0.0 | 0.297280 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0003230 | RBH | 0.0 | 7.114727 | 6.316383 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0045600 | RBH | 2.245935 | 1.46493 | 1.3513655 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0003190 | RBH | 0.0 | 0.301804 | 0.541095 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0050000 | RBH | 1.8865795 | 1.338211 | 7.4367285 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_07g0003220 | RBH | 0.0 | 0.064857 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0003230 | RBH | 0.0 | 2.392072 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0003240 | RBH | 0.0 | 3.364720 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_07g0003310 | RBH | 0.000000 | 0.378504 | 2.461272 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_07g0003200 | RBH | 0.0 | 2.139895 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G003320 | RBH | 0.0 | 2.597117 | 1.766783 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0003110 | RBH | 0.0 | 0.975815 | 5.890379 |
