Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os07g05190 | OGI:07007030 | 16/16 | Nipponbare | IRGSP 1.0 | MSU | Chr07:2313396-2319009 | ||||||||
| Gene Symbol | GHR1, OsGHR1 | ||||||||||
| DNA seq | TATACACAAATTTTAGTGAAACTACTTGCTGTCACCTGTCAGCATCCAGATGATGTTCAACATGAATCCTATTTCTTGCCAGTACATTGGACAAACATCACATGAGATGTACAAGTCCCTGACAGTACCGTCATGTTCAGTACCGTCCTGGTTAGTACGACTCACTGACAACCAAATCACAGATTCAAGTGACTGGATTTACAGAGAAATCTAATTTGCAACTCTAACTTGCAAGAGAAAATTATGTAAACAATTAAGGCAGCATTGACACTTGAGCAATTGAGACATGCCATATGAACTTGGAGGCATCAAGGCGAGGCCAACCATACACTTGCATTTGCTACAGCGACACTAGAGTTTTCAGTCAAAATAATGCACTCAACTCAACACACAGAAGAGTATCCATCTAATGCTAGAGACAATGAGGCTAAACTAGATTGATGAAAGATCCTCATACACAGACTTGATCCCAGGTCTTTCAGAGACCGGCCGGATGCATCTCAAGGCAATGCCCAGCACATCCTTCATGCCCTTGACAGAAACTTGGTTCTCAGAATCTGAAGCCATGGCTGGATCAAAGCAATCTGATCCCCGACCTTCAGCCACCCGCAGACGGACCCAATCAGTCAGGTCAACACCACCTTCAGAACCCGAGACAACATCCCCAGCACACCTGCCAGTTAGGAGCTCCAGCAGCACGACACCGAAGGCGTACACGTCAGACTTGAACGAGGGAGATGGCTTCTTGGACGCTGCTAGCTCTGGGGCACGGTAGCCTAGCACGCCCAGGTCGAGGATCTGCTCAACAACTCCAGCCTGGGTCATCAGGCGGTGCAGGCAGTAGTCAGCGACACGGGCATTGAGGTCAAGTCCGTCCAACAAGATGTTGGTAGCCTTGAGGTTTCCATGAGGCATCGCTCGGTCAAAATGGAGGTAGTTCAGGCCACGCGCGACATCAACTGCGATCTTCAGCCGTTGCGCCCAGGTCAGTGGAGGGCCTCTCCTTCCTGGACGATCTGCTAGGTTTCAGAGGAACATAAAGCTTAGTTAGAGACTGAACATATTGGTAACCAACCAGTCACATGCATTTGCAGATGGAGTATACAAGATCTCTAAGCCTGATGTGTTCAATTGCAGAAATGAGAAACCAGTAAATGAGAGCATTACCGTACAAAAAGCTCGCAAGACTTCCTGGTGAAACATAATCCGACAAGATCAGTTTTTCATGTGCTGTTGGACCCCAGTAGTAACCACGCAAGCCAACAACATTGGGATGCCTAATGTTTGCAAACTTCTTGGCCTCCTTCGAGAACTCTTTCTTGGGCCTTGCAACACCTTCCCTCAGCCATTTCACTGTTAGGAAGACACCATTCTCAAGTGTTGCTCTGTACGAAGTCCCGTGGCTGCTCCTCCCAAGAACCTCAGCCGGTGCCCTTGACAATTCCTCCGGTGTCAGTGTGATTGTTTCATCCAGGAAGTGCAACTCCCCTGCTAACCTGTCAGGTGATCTGACATCCAACCGTGCCAGGCCTTCCTGGGTGTATGCCTCTCCAGAATCTGGTGACCAAGAGAAGCGGCTACCTTTGGATGGGGAAAATCCCCCTACACCTGACAGCTTCTCTTCTTGGCTTAGTGCTTCAGATGTAGAGCCCTTTCGAGGAGCACCAAGCTCATCTGCTGAGACCACCAAACCACCTTTGTCATCCTTTCCTTTTGTACTGGCCATGTCTTTGCTAGTCTTGTGGAGGTTCTTGTCTGAAACCTTTTCTGAGCTAGGGAACTGCCGTGAGATTTGCTTGTAATGGCAAACAATGGCAACAAGGATAAGGATGACAAGAGCAACGATACTAGCTGCTATAAGTGCTATTTTAGCTGCTGCACTGAGTGACCTGCCACCAGCTGAACCAGAGGAACTGCCAGACCCAGAAGAGCTAGCAGGATAGTCTAGTCTCGAGTTCCCAGGATGGAAGGAAGATTCTGGAAACTTCCTCAAGTTCACTGGAACAACACCAGATAGATCATTATAAGAGGCATTGAATGATTGCAATGTATCTGGAAGTGCATCAGGCAATGACCCAGTGAACTGGTTTATTGATATGTCGAGAGCAGTGAGCGCTGCAAGCTTGGTGATAGAGGCTGGCAAAGGACCAGAGAAATTGTTTGTAGATATATCAAGAGCTTGGAGGCTAGATAAAGATGCTATTTCATCAGGGAGGCTGCCATTAAAGTGATTTCCAGAAATATCAAGAACTTGAAGACTCAGATTTTTTGACGATGATCCTGGAAATGATAGACCTCCACTAAGCATATTGTCGTGGATGTAGAGCTCTTGCAGCATGGACGAAGTGAGTAAATTAGCAGGAATAGGACCTCTGAACTGATTGGAGCTGAGATCAAGGACAGTGAGTTTGGGGTACTGAACAACAGCTTCAGGGATGGTGTCAGCTAGGGAATTATGGGAAAGATTCAGGTAGTTCAAGCGAAGGAATTGAGAGCTCACATCAGGAATTGTTCCAGTTAGATTGTTCTGGCTAAGATCAACATACTCCAAATCATTGCTCCATTTGGCAATAACTGACAAATTTCCTTTAAACTTGTTATTTGACAGATCTAACACAGTGCAGCTTCCAGCAAGCATTGGAAGATCCCCAAAGAGAGCATTGGAGGAAAGATTAATAACTTGCAAGGTGGTCGATGTGATCATATTGATGTGTCCTGTGGATTAACGAAAAATATTGTTAGTCCAAAATAACACAAGTGGAACTTAAAAGTGATACTTTTGTTTTAAGAGAAATGTCATGATATGACAGAAAACATAGGAGCGTGTTTGAGTTGTCCTGCTCTTTTAATAACAATTTAGATAACTATGATGAATGCATTGAGTTCTAGGAGTGATGACTTTACTCAAATGCAAGATATAATCTGTGAGACATAATATTTTGAAATGCAACAGTTCAGTATTCTTACTCATACACCCAGTCAGGTATATACAACTAGCTGCGTCCTATTAATAATTGTATTTTTCACAACATCCAAAGGTGAAGATCTAACAACAAAGGTTAAGATACATGTACTGTCACTGCAACTACACAATGCATTTAACATTACTGTGGAACAGAAATCCATCACAAACTACTTTCAAATATTCTCAATAATACCATTGGGGTATGCATGCATAATAAATAACGTCTCTCTTCATGACCAAAACTATCACAAGCTAGCCATCACTGATCCAGTAATTGCTTTGGAGAAAATTATTAGTCAGTAGGAGGCTAGGAGCAAAGATTCCAAGAAAGAACCTTTCACGCAAAACAAGAAGAATGCAAATATAGAATTGGCATAAGACAAAACAATCAAATGACCTACACTGGTGCACACTCAACCACAGATCAGTAAAAGCTCATGCCATGCTGTGTAATGTAATCAACAGATCAGTACATCATTGAAATGAGAGAATCAATTGGTATAATGAACTAAGAACACTAATGTAAGATGCCGATTCAAAGTTTTATGCAAGCTGAACACTACCGATCTGTTTTGGAGGCTGGACCTTTTGTGAAGGAGCCCCACATCCAATTTTTTTAAATCAGAATGGGCATCCACATGGTATGAAGAGAAAAGGAACAAAAGGTGTAAGAAGAACAATTTTCAGGTAGAGCTCATTACCAGTCAGATTATTTGCACTCAGGTCCAGCTCACTGAGAACCAGAGAATCCCCTTTCAGAAGTCCACTAGGTACAAACCCCGTGAATGCATTGTTTGCCAGTCGCAAAACTTCAAGATCATAGACATAATTGAACCCTGGCAAGTCTCCAGATAACTGATTATGGCTCAGATCAAGCACCTTCAATCTCCCAAATGTCGAGAGCTCAACTCCATCAATCAATGACCCAGTCAACTTATTGTTGCTCAAGTTGAGATATAGAACTGTCTCTGAAATATCTGCCAGGAACTTGAGCTCTTTGGGGGTGGTACTGGTGAGCAAGTTCCCACTGAAGTCAACATGAGCAACAGTTGACTCAATCAAGAATTTCCAATCAACACCGCCTTCCAATTGATTCCAGCTTAGATCCAAAGATTGGAGATTCACAAGAAGGCCAAGCCCAGATGGGATGCCCTTTGTGAAGGCATTGTATGAGAGGTTCAGAGCAACCATGCTGCGGAGACCTTTCAGAGATGAAGGCAATGGACCAGACAAAGAGTTTCCACTCACATCCAGTGACTGAAGCGACGCAAGCCCATCGATGGAGTCAGGCAGTGGCCCTGAGAAGTTGTTCCTGGCAAGCGACAGGTTCTGCAGGCTCCGGAGATTGCCTATGTTATCAGGAATCGGCCCCGAGAACCGGTTGTTTGAGATATCCATGAACTTCAGGCTCTTCAGACTACCCACATTGCTCGGCAGGCTCCCAGACAGATTGTTATTGGCCATAGAGAGCTTCACAAGCATAGTCAGATTGACGAACACGGACAGATCGGCGACACCGGAGATGCCATGGCCATCAAGCACAACCCCTGCCACGTTTGCGCCATTGCACACGATGCCGTTCCAGGAAGCCGGACAGCCATTGAAATCAATCGACTCGTCGTTCCACGAATCGGTGATGAATCCAGCAGGGTCATGAGTGATGCCCTTCTTGAAAGCAAGGAGCGCAAGGATGTCCTGTGAAGGTAGCTGGCCAAATGCAGGGGCAGCAAGCAGGAGCAGCACCAAAAAACTCCCAAGAATCCCCATTGCTGCTCTCCAGACAAAGATTGGAAGCTACTGAGCCTCAAAGACACAGCACCTGAAGCATTTCTTGCAGCAAAAATGGACTGGAAGTGTAGAGTGTATCTACCAGAAGGCTCTCACAACAAGCTGCCACTAATACCCACAACACTTGTCCCTTTCAGCTGATCTCCACAGTACCACACATCACCATAAAACCCCCAACTTTTCAGCTCCTTCCAACCTGAAATAAGCACGGAATGGCAAGTTAAGGACCGAATCTTTGAGCCTCCCTGCAAGCAGGTAAAAATCCAGCTAGTACAAAGAAATGGCAACTTTAGTAAGGGATCCAAAGAGTTGGTTAAACCCCTCACCAGCTTTTAACACCCAATCATGCAGGTAAAAAAAAGCACCATCTTTCCCCCCTCACTAAAACAGCCCAACTACCACTAGTGTATTATCACAGCTTCAACCCACAAAAACACAGCTCAAAAAGCAGAAACTTTTACTCATCCATCCAAGCCACCAAGAAACCAAAAGAAAAACAAACCCCAGATGCAACCAGCAAACAAAACAAAAAACCTACACACAATCTTTATACACTTGCAATCTTGCATCCTCCTTACCCAGCAATGAGGCCGGTTGCTCTGACGCATTAAGAACAAGCAACCACACCACCTTGGAGAATGAAGGAAAAGAATGAATGGTTGCGGCGGCAGGGGAGGAGGGGAAGTGGTGGAGGCAATGCCGTGGAGAGAAGGGAGGACGGCGGCGAAGCGAGGAACCCTAGCAATGGGGGATTGGGTTCTTGGTGGCTTGGCTGCTAGGGAGAAGGAGGAGAAGAGAGGGGAATGGTGGTGGTGGTGGCTGCAAGCCTGCAGGGGAAGAGGTAGAAAGGAGAGGAGGGAG
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| CDS seq | ATGGGGATTCTTGGGAGTTTTTTGGTGCTGCTCCTGCTTGCTGCCCCTGCATTTGGCCAGCTACCTTCACAGGACATCCTTGCGCTCCTTGCTTTCAAGAAGGGCATCACTCATGACCCTGCTGGATTCATCACCGATTCGTGGAACGACGAGTCGATTGATTTCAATGGCTGTCCGGCTTCCTGGAACGGCATCGTGTGCAATGGCGCAAACGTGGCAGGGGTTGTGCTTGATGGCCATGGCATCTCCGGTGTCGCCGATCTGTCCGTGTTCGTCAATCTGACTATGCTTGTGAAGCTCTCTATGGCCAATAACAATCTGTCTGGGAGCCTGCCGAGCAATGTGGGTAGTCTGAAGAGCCTGAAGTTCATGGATATCTCAAACAACCGGTTCTCGGGGCCGATTCCTGATAACATAGGCAATCTCCGGAGCCTGCAGAACCTGTCGCTTGCCAGGAACAACTTCTCAGGGCCACTGCCTGACTCCATCGATGGGCTTGCGTCGCTTCAGTCACTGGATGTGAGTGGAAACTCTTTGTCTGGTCCATTGCCTTCATCTCTGAAAGGTCTCCGCAGCATGGTTGCTCTGAACCTCTCATACAATGCCTTCACAAAGGGCATCCCATCTGGGCTTGGCCTTCTTGTGAATCTCCAATCTTTGGATCTAAGCTGGAATCAATTGGAAGGCGGTGTTGATTGGAAATTCTTGATTGAGTCAACTGTTGCTCATGTTGACTTCAGTGGGAACTTGCTCACCAGTACCACCCCCAAAGAGCTCAAGTTCCTGGCAGATATTTCAGAGACAGTTCTATATCTCAACTTGAGCAACAATAAGTTGACTGGGTCATTGATTGATGGAGTTGAGCTCTCGACATTTGGGAGATTGAAGGTGCTTGATCTGAGCCATAATCAGTTATCTGGAGACTTGCCAGGGTTCAATTATGTCTATGATCTTGAAGTTTTGCGACTGGCAAACAATGCATTCACGGGGTTTGTACCTAGTGGACTTCTGAAAGGGGATTCTCTGGTTCTCAGTGAGCTGGACCTGAGTGCAAATAATCTGACTGGACACATCAATATGATCACATCGACCACCTTGCAAGTTATTAATCTTTCCTCCAATGCTCTCTTTGGGGATCTTCCAATGCTTGCTGGAAGCTGCACTGTGTTAGATCTGTCAAATAACAAGTTTAAAGGAAATTTGTCAGTTATTGCCAAATGGAGCAATGATTTGGAGTATGTTGATCTTAGCCAGAACAATCTAACTGGAACAATTCCTGATGTGAGCTCTCAATTCCTTCGCTTGAACTACCTGAATCTTTCCCATAATTCCCTAGCTGACACCATCCCTGAAGCTGTTGTTCAGTACCCCAAACTCACTGTCCTTGATCTCAGCTCCAATCAGTTCAGAGGTCCTATTCCTGCTAATTTACTCACTTCGTCCATGCTGCAAGAGCTCTACATCCACGACAATATGCTTAGTGGAGGTCTATCATTTCCAGGATCATCGTCAAAAAATCTGAGTCTTCAAGTTCTTGATATTTCTGGAAATCACTTTAATGGCAGCCTCCCTGATGAAATAGCATCTTTATCTAGCCTCCAAGCTCTTGATATATCTACAAACAATTTCTCTGGTCCTTTGCCAGCCTCTATCACCAAGCTTGCAGCGCTCACTGCTCTCGACATATCAATAAACCAGTTCACTGGGTCATTGCCTGATGCACTTCCAGATACATTGCAATCATTCAATGCCTCTTATAATGATCTATCTGGTGTTGTTCCAGTGAACTTGAGGAAGTTTCCAGAATCTTCCTTCCATCCTGGGAACTCGAGACTAGACTATCCTGCTAGCTCTTCTGGGTCTGGCAGTTCCTCTGGTTCAGCTGGTGGCAGGTCACTCAGTGCAGCAGCTAAAATAGCACTTATAGCAGCTAGTATCGTTGCTCTTGTCATCCTTATCCTTGTTGCCATTGTTTGCCATTACAAGCAAATCTCACGGCAGTTCCCTAGCTCAGAAAAGGTTTCAGACAAGAACCTCCACAAGACTAGCAAAGACATGGCCAGTACAAAAGGAAAGGATGACAAAGGTGGTTTGGTGGTCTCAGCAGATGAGCTTGGTGCTCCTCGAAAGGGCTCTACATCTGAAGCACTAAGCCAAGAAGAGAAGCTGTCAGGTGTAGGGGGATTTTCCCCATCCAAAGGTAGCCGCTTCTCTTGGTCACCAGATTCTGGAGAGGCATACACCCAGGAAGGCCTGGCACGGTTGGATGTCAGATCACCTGACAGGTTAGCAGGGGAGTTGCACTTCCTGGATGAAACAATCACACTGACACCGGAGGAATTGTCAAGGGCACCGGCTGAGGTTCTTGGGAGGAGCAGCCACGGGACTTCGTACAGAGCAACACTTGAGAATGGTGTCTTCCTAACAGTGAAATGGCTGAGGGAAGGTGTTGCAAGGCCCAAGAAAGAGTTCTCGAAGGAGGCCAAGAAGTTTGCAAACATTAGGCATCCCAATGTTGTTGGCTTGCGTGGTTACTACTGGGGTCCAACAGCACATGAAAAACTGATCTTGTCGGATTATGTTTCACCAGGAAGTCTTGCGAGCTTTTTGTACGATCGTCCAGGAAGGAGAGGCCCTCCACTGACCTGGGCGCAACGGCTGAAGATCGCAGTTGATGTCGCGCGTGGCCTGAACTACCTCCATTTTGACCGAGCGATGCCTCATGGAAACCTCAAGGCTACCAACATCTTGTTGGACGGACTTGACCTCAATGCCCGTGTCGCTGACTACTGCCTGCACCGCCTGATGACCCAGGCTGGAGTTGTTGAGCAGATCCTCGACCTGGGCGTGCTAGGCTACCGTGCCCCAGAGCTAGCAGCGTCCAAGAAGCCATCTCCCTCGTTCAAGTCTGACGTGTACGCCTTCGGTGTCGTGCTGCTGGAGCTCCTAACTGGCAGGTGTGCTGGGGATGTTGTCTCGGGTTCTGAAGGTGGTGTTGACCTGACTGATTGGGTCCGTCTGCGGGTGGCTGAAGGTCGGGGATCAGATTGCTTTGATCCAGCCATGGCTTCAGATTCTGAGAACCAAGTTTCTGTCAAGGGCATGAAGGATGTGCTGGGCATTGCCTTGAGATGCATCCGGCCGGTCTCTGAAAGACCTGGGATCAAGTCTGTGTATGAGGATCTTTCATCAATCTAG
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| Protein seq | MGILGSFLVLLLLAAPAFGQLPSQDILALLAFKKGITHDPAGFITDSWNDESIDFNGCPASWNGIVCNGANVAGVVLDGHGISGVADLSVFVNLTMLVKLSMANNNLSGSLPSNVGSLKSLKFMDISNNRFSGPIPDNIGNLRSLQNLSLARNNFSGPLPDSIDGLASLQSLDVSGNSLSGPLPSSLKGLRSMVALNLSYNAFTKGIPSGLGLLVNLQSLDLSWNQLEGGVDWKFLIESTVAHVDFSGNLLTSTTPKELKFLADISETVLYLNLSNNKLTGSLIDGVELSTFGRLKVLDLSHNQLSGDLPGFNYVYDLEVLRLANNAFTGFVPSGLLKGDSLVLSELDLSANNLTGHINMITSTTLQVINLSSNALFGDLPMLAGSCTVLDLSNNKFKGNLSVIAKWSNDLEYVDLSQNNLTGTIPDVSSQFLRLNYLNLSHNSLADTIPEAVVQYPKLTVLDLSSNQFRGPIPANLLTSSMLQELYIHDNMLSGGLSFPGSSSKNLSLQVLDISGNHFNGSLPDEIASLSSLQALDISTNNFSGPLPASITKLAALTALDISINQFTGSLPDALPDTLQSFNASYNDLSGVVPVNLRKFPESSFHPGNSRLDYPASSSGSGSSSGSAGGRSLSAAAKIALIAASIVALVILILVAIVCHYKQISRQFPSSEKVSDKNLHKTSKDMASTKGKDDKGGLVVSADELGAPRKGSTSEALSQEEKLSGVGGFSPSKGSRFSWSPDSGEAYTQEGLARLDVRSPDRLAGELHFLDETITLTPEELSRAPAEVLGRSSHGTSYRATLENGVFLTVKWLREGVARPKKEFSKEAKKFANIRHPNVVGLRGYYWGPTAHEKLILSDYVSPGSLASFLYDRPGRRGPPLTWAQRLKIAVDVARGLNYLHFDRAMPHGNLKATNILLDGLDLNARVADYCLHRLMTQAGVVEQILDLGVLGYRAPELAASKKPSPSFKSDVYAFGVVLLELLTGRCAGDVVSGSEGGVDLTDWVRLRVAEGRGSDCFDPAMASDSENQVSVKGMKDVLGIALRCIRPVSERPGIKSVYEDLSSI |
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| Function | LRR receptor-like serine/threonine-protein kinase GHR1 [UniProtKB/Swiss-Prot:C0LGQ9] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os07g05190 | LOC_Os07g05190.1 | Chr07 | 2313396 | 2319009 | - | MSU_osa1r7 | ||
| CDS seq | ATGGGGATTCTTGGGAGTTTTTTGGTGCTGCTCCTGCTTGCTGCCCCTGCATTTGGCCAGCTACCTTCACAGGACATCCTTGCGCTCCTTGCTTTCAAGAAGGGCATCACTCATGACCCTGCTGGATTCATCACCGATTCGTGGAACGACGAGTCGATTGATTTCAATGGCTGTCCGGCTTCCTGGAACGGCATCGTGTGCAATGGCGCAAACGTGGCAGGGGTTGTGCTTGATGGCCATGGCATCTCCGGTGTCGCCGATCTGTCCGTGTTCGTCAATCTGACTATGCTTGTGAAGCTCTCTATGGCCAATAACAATCTGTCTGGGAGCCTGCCGAGCAATGTGGGTAGTCTGAAGAGCCTGAAGTTCATGGATATCTCAAACAACCGGTTCTCGGGGCCGATTCCTGATAACATAGGCAATCTCCGGAGCCTGCAGAACCTGTCGCTTGCCAGGAACAACTTCTCAGGGCCACTGCCTGACTCCATCGATGGGCTTGCGTCGCTTCAGTCACTGGATGTGAGTGGAAACTCTTTGTCTGGTCCATTGCCTTCATCTCTGAAAGGTCTCCGCAGCATGGTTGCTCTGAACCTCTCATACAATGCCTTCACAAAGGGCATCCCATCTGGGCTTGGCCTTCTTGTGAATCTCCAATCTTTGGATCTAAGCTGGAATCAATTGGAAGGCGGTGTTGATTGGAAATTCTTGATTGAGTCAACTGTTGCTCATGTTGACTTCAGTGGGAACTTGCTCACCAGTACCACCCCCAAAGAGCTCAAGTTCCTGGCAGATATTTCAGAGACAGTTCTATATCTCAACTTGAGCAACAATAAGTTGACTGGGTCATTGATTGATGGAGTTGAGCTCTCGACATTTGGGAGATTGAAGGTGCTTGATCTGAGCCATAATCAGTTATCTGGAGACTTGCCAGGGTTCAATTATGTCTATGATCTTGAAGTTTTGCGACTGGCAAACAATGCATTCACGGGGTTTGTACCTAGTGGACTTCTGAAAGGGGATTCTCTGGTTCTCAGTGAGCTGGACCTGAGTGCAAATAATCTGACTGGACACATCAATATGATCACATCGACCACCTTGCAAGTTATTAATCTTTCCTCCAATGCTCTCTTTGGGGATCTTCCAATGCTTGCTGGAAGCTGCACTGTGTTAGATCTGTCAAATAACAAGTTTAAAGGAAATTTGTCAGTTATTGCCAAATGGAGCAATGATTTGGAGTATGTTGATCTTAGCCAGAACAATCTAACTGGAACAATTCCTGATGTGAGCTCTCAATTCCTTCGCTTGAACTACCTGAATCTTTCCCATAATTCCCTAGCTGACACCATCCCTGAAGCTGTTGTTCAGTACCCCAAACTCACTGTCCTTGATCTCAGCTCCAATCAGTTCAGAGGTCCTATTCCTGCTAATTTACTCACTTCGTCCATGCTGCAAGAGCTCTACATCCACGACAATATGCTTAGTGGAGGTCTATCATTTCCAGGATCATCGTCAAAAAATCTGAGTCTTCAAGTTCTTGATATTTCTGGAAATCACTTTAATGGCAGCCTCCCTGATGAAATAGCATCTTTATCTAGCCTCCAAGCTCTTGATATATCTACAAACAATTTCTCTGGTCCTTTGCCAGCCTCTATCACCAAGCTTGCAGCGCTCACTGCTCTCGACATATCAATAAACCAGTTCACTGGGTCATTGCCTGATGCACTTCCAGATACATTGCAATCATTCAATGCCTCTTATAATGATCTATCTGGTGTTGTTCCAGTGAACTTGAGGAAGTTTCCAGAATCTTCCTTCCATCCTGGGAACTCGAGACTAGACTATCCTGCTAGCTCTTCTGGGTCTGGCAGTTCCTCTGGTTCAGCTGGTGGCAGGTCACTCAGTGCAGCAGCTAAAATAGCACTTATAGCAGCTAGTATCGTTGCTCTTGTCATCCTTATCCTTGTTGCCATTGTTTGCCATTACAAGCAAATCTCACGGCAGTTCCCTAGCTCAGAAAAGGTTTCAGACAAGAACCTCCACAAGACTAGCAAAGACATGGCCAGTACAAAAGGAAAGGATGACAAAGGTGGTTTGGTGGTCTCAGCAGATGAGCTTGGTGCTCCTCGAAAGGGCTCTACATCTGAAGCACTAAGCCAAGAAGAGAAGCTGTCAGGTGTAGGGGGATTTTCCCCATCCAAAGGTAGCCGCTTCTCTTGGTCACCAGATTCTGGAGAGGCATACACCCAGGAAGGCCTGGCACGGTTGGATGTCAGATCACCTGACAGGTTAGCAGGGGAGTTGCACTTCCTGGATGAAACAATCACACTGACACCGGAGGAATTGTCAAGGGCACCGGCTGAGGTTCTTGGGAGGAGCAGCCACGGGACTTCGTACAGAGCAACACTTGAGAATGGTGTCTTCCTAACAGTGAAATGGCTGAGGGAAGGTGTTGCAAGGCCCAAGAAAGAGTTCTCGAAGGAGGCCAAGAAGTTTGCAAACATTAGGCATCCCAATGTTGTTGGCTTGCGTGGTTACTACTGGGGTCCAACAGCACATGAAAAACTGATCTTGTCGGATTATGTTTCACCAGGAAGTCTTGCGAGCTTTTTGTACGATCGTCCAGGAAGGAGAGGCCCTCCACTGACCTGGGCGCAACGGCTGAAGATCGCAGTTGATGTCGCGCGTGGCCTGAACTACCTCCATTTTGACCGAGCGATGCCTCATGGAAACCTCAAGGCTACCAACATCTTGTTGGACGGACTTGACCTCAATGCCCGTGTCGCTGACTACTGCCTGCACCGCCTGATGACCCAGGCTGGAGTTGTTGAGCAGATCCTCGACCTGGGCGTGCTAGGCTACCGTGCCCCAGAGCTAGCAGCGTCCAAGAAGCCATCTCCCTCGTTCAAGTCTGACGTGTACGCCTTCGGTGTCGTGCTGCTGGAGCTCCTAACTGGCAGGTGTGCTGGGGATGTTGTCTCGGGTTCTGAAGGTGGTGTTGACCTGACTGATTGGGTCCGTCTGCGGGTGGCTGAAGGTCGGGGATCAGATTGCTTTGATCCAGCCATGGCTTCAGATTCTGAGAACCAAGTTTCTGTCAAGGGCATGAAGGATGTGCTGGGCATTGCCTTGAGATGCATCCGGCCGGTCTCTGAAAGACCTGGGATCAAGTCTGTGTATGAGGATCTTTCATCAATCTAG
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| Protein seq | MGILGSFLVLLLLAAPAFGQLPSQDILALLAFKKGITHDPAGFITDSWNDESIDFNGCPASWNGIVCNGANVAGVVLDGHGISGVADLSVFVNLTMLVKLSMANNNLSGSLPSNVGSLKSLKFMDISNNRFSGPIPDNIGNLRSLQNLSLARNNFSGPLPDSIDGLASLQSLDVSGNSLSGPLPSSLKGLRSMVALNLSYNAFTKGIPSGLGLLVNLQSLDLSWNQLEGGVDWKFLIESTVAHVDFSGNLLTSTTPKELKFLADISETVLYLNLSNNKLTGSLIDGVELSTFGRLKVLDLSHNQLSGDLPGFNYVYDLEVLRLANNAFTGFVPSGLLKGDSLVLSELDLSANNLTGHINMITSTTLQVINLSSNALFGDLPMLAGSCTVLDLSNNKFKGNLSVIAKWSNDLEYVDLSQNNLTGTIPDVSSQFLRLNYLNLSHNSLADTIPEAVVQYPKLTVLDLSSNQFRGPIPANLLTSSMLQELYIHDNMLSGGLSFPGSSSKNLSLQVLDISGNHFNGSLPDEIASLSSLQALDISTNNFSGPLPASITKLAALTALDISINQFTGSLPDALPDTLQSFNASYNDLSGVVPVNLRKFPESSFHPGNSRLDYPASSSGSGSSSGSAGGRSLSAAAKIALIAASIVALVILILVAIVCHYKQISRQFPSSEKVSDKNLHKTSKDMASTKGKDDKGGLVVSADELGAPRKGSTSEALSQEEKLSGVGGFSPSKGSRFSWSPDSGEAYTQEGLARLDVRSPDRLAGELHFLDETITLTPEELSRAPAEVLGRSSHGTSYRATLENGVFLTVKWLREGVARPKKEFSKEAKKFANIRHPNVVGLRGYYWGPTAHEKLILSDYVSPGSLASFLYDRPGRRGPPLTWAQRLKIAVDVARGLNYLHFDRAMPHGNLKATNILLDGLDLNARVADYCLHRLMTQAGVVEQILDLGVLGYRAPELAASKKPSPSFKSDVYAFGVVLLELLTGRCAGDVVSGSEGGVDLTDWVRLRVAEGRGSDCFDPAMASDSENQVSVKGMKDVLGIALRCIRPVSERPGIKSVYEDLSSI
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.725466 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_07g0145400 | RBH | 0.0 | 0.0 | 2.886007 |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | Os07g0145400 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0002830 | RBH | 0.0 | 3.725445 | 1.948247 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0002830 | RBH | 0.0 | 2.338866 | 1.018534 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_07g0002720 | RBH | 0.0 | 4.675846 | 3.546805 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_07g0002660 | RBH | 0.0 | 0.335395 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0002770 | RBH | 0.0 | 14.542565 | 5.576416 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0040500 | RBH | 8.06272 | 4.576492 | 6.952266 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0002850 | RBH | 0.0 | 0.425692 | 0.356861 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0046000 | RBH | 8.0986075 | 1.030543 | 61.8678685 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_07g0002870 | RBH | 0.0 | 0.168434 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0002880 | RBH | 0.0 | 9.472085 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0002870 | RBH | 0.0 | 10.634070 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_07g0002960 | RBH | 0.0 | 0.498105 | 0.223342 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_07g0002850 | RBH | 0.0 | 5.620038 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G002960 | RBH | 0.000000 | 3.214136 | 4.721267 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0002770 | RBH | 0.0 | 2.331764 | 1.901731 |
