Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os06g47590 | OGI:06081070 | 14/16 | Nipponbare | IRGSP 1.0 | MSU | Chr06:28818162-28819180 | ||||||||
| Gene Symbol | ERF121, OsERF#121, OsERF121, AP2/EREBP#061, AP2/EREBP61, DLN174, OsDLN174 | ||||||||||
| DNA seq | GGGAAAAAAAGAGAGGAAAAAACAAGGGGAGGAAAAGGAAGAGGGGGAAGGGAGACGCCACTGCCAAACCCTAGCCGAGCACCCCCTCCCCTCCTCCTCCCCCATCGGAGCCTCCTCGCCTCGCCCTCGCCCACCAAGCCCCCGCGCGCGCGCACGTGCATCCGGCGATGCGGAAGTCGAAGCAGCCGCAGCCGCAGCCGTCGCCGGAGATCCGGTACCGGGGCGTGCGGAAGCGGCCGTCGGGGAGGTACGCCGCCGAGATCCGGGACCCGGCGAAGAAGACCCCGATCTGGCTGGGTACCTTCGACTCCGCCGAGGTGGCGGCCCGCGCCTACGACGACGCCGCCCGATCTCTCCGCGGGCCCACCGCGCGGACCAACTTCCCCTTGGCCGCGCCGTCCGCGCCCCCGCCCCGGCCGCCGGCGGCGGCGGCGGCGGCCGCCACGTCCAGCCACAGCAGCACCGTTGAGTCATGGAGCGGCGGCGCCCCACGCGCCGCCGCATCCGCCTTAGCCCGCTCCGCCGCCCCCATGGAGGCGACCCAGGAGGAGGATTGCCACAGCTACTGCGGCTCCTCTTCGTCCGTCCTCTGCGAGGACGGCAGCGACGACGCGGCCGCCTCTCGCACTCCGCTGCCGTTCGATCTGAACATGCCACCTCCGGAGGAGGAGCTAGACATGGCCGCCGTGGCCGATCAGATGGGTATCCGCTACGACACGCTGCTCCGCCTCTAGCTCGCTAGAACACCAATGATTTGGAGTGGGGGGCGAGCTAGAAAAGATCGAGACAAGCTCTGCTGCTCCGCTCTGCTCCGATCTCTTCTTCGGCTGATCCGATGGTGTTCTCAAACTAGAAATGGATAATTCTTGCCTCCTTTTTCTCTCTTTTTCTCCTTTTTTTTCTTATTTTCTTACCACGTTGATGATTCGATATGTGAATAATTCTGTGATGTAAGCTGCGAGCAAGGAAATCTGAGCTTTTCCTTATCTTTCGCTGTGGTATTCCGAGTGATATCGCTG
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| CDS seq | ATGCGGAAGTCGAAGCAGCCGCAGCCGCAGCCGTCGCCGGAGATCCGGTACCGGGGCGTGCGGAAGCGGCCGTCGGGGAGGTACGCCGCCGAGATCCGGGACCCGGCGAAGAAGACCCCGATCTGGCTGGGTACCTTCGACTCCGCCGAGGTGGCGGCCCGCGCCTACGACGACGCCGCCCGATCTCTCCGCGGGCCCACCGCGCGGACCAACTTCCCCTTGGCCGCGCCGTCCGCGCCCCCGCCCCGGCCGCCGGCGGCGGCGGCGGCGGCCGCCACGTCCAGCCACAGCAGCACCGTTGAGTCATGGAGCGGCGGCGCCCCACGCGCCGCCGCATCCGCCTTAGCCCGCTCCGCCGCCCCCATGGAGGCGACCCAGGAGGAGGATTGCCACAGCTACTGCGGCTCCTCTTCGTCCGTCCTCTGCGAGGACGGCAGCGACGACGCGGCCGCCTCTCGCACTCCGCTGCCGTTCGATCTGAACATGCCACCTCCGGAGGAGGAGCTAGACATGGCCGCCGTGGCCGATCAGATGGGTATCCGCTACGACACGCTGCTCCGCCTCTAG
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| Protein seq | MRKSKQPQPQPSPEIRYRGVRKRPSGRYAAEIRDPAKKTPIWLGTFDSAEVAARAYDDAARSLRGPTARTNFPLAAPSAPPPRPPAAAAAAATSSHSSTVESWSGGAPRAAASALARSAAPMEATQEEDCHSYCGSSSSVLCEDGSDDAAASRTPLPFDLNMPPPEEELDMAAVADQMGIRYDTLLRL |
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| Function | Ethylene-responsive transcription factor 4 [UniProtKB/Swiss-Prot:O80340] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os06g47590 | LOC_Os06g47590.1 | Chr06 | 28818162 | 28819180 | + | MSU_osa1r7 | ||
| CDS seq | ATGCGGAAGTCGAAGCAGCCGCAGCCGCAGCCGTCGCCGGAGATCCGGTACCGGGGCGTGCGGAAGCGGCCGTCGGGGAGGTACGCCGCCGAGATCCGGGACCCGGCGAAGAAGACCCCGATCTGGCTGGGTACCTTCGACTCCGCCGAGGTGGCGGCCCGCGCCTACGACGACGCCGCCCGATCTCTCCGCGGGCCCACCGCGCGGACCAACTTCCCCTTGGCCGCGCCGTCCGCGCCCCCGCCCCGGCCGCCGGCGGCGGCGGCGGCGGCCGCCACGTCCAGCCACAGCAGCACCGTTGAGTCATGGAGCGGCGGCGCCCCACGCGCCGCCGCATCCGCCTTAGCCCGCTCCGCCGCCCCCATGGAGGCGACCCAGGAGGAGGATTGCCACAGCTACTGCGGCTCCTCTTCGTCCGTCCTCTGCGAGGACGGCAGCGACGACGCGGCCGCCTCTCGCACTCCGCTGCCGTTCGATCTGAACATGCCACCTCCGGAGGAGGAGCTAGACATGGCCGCCGTGGCCGATCAGATGGGTATCCGCTACGACACGCTGCTCCGCCTCTAG
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| Protein seq | MRKSKQPQPQPSPEIRYRGVRKRPSGRYAAEIRDPAKKTPIWLGTFDSAEVAARAYDDAARSLRGPTARTNFPLAAPSAPPPRPPAAAAAAATSSHSSTVESWSGGAPRAAASALARSAAPMEATQEEDCHSYCGSSSSVLCEDGSDDAAASRTPLPFDLNMPPPEEELDMAAVADQMGIRYDTLLRL |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.695846 | 0.450904 | 0.440247 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_06g0691100 | RBH | 1.063584 | 0.803652 | 2.393664 |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | Os06g0691100 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_06g0027170 | RBH | 0.247346 | 2.863564 | 1.515972 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_06g0026980 | RBH | 0.0 | 0.551787 | 1.998648 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_06g0027160 | RBH | 0.545738 | 2.052913 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_06g0026720 | RBH | 0.000000 | 0.171760 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_06g0027210 | RBH | 2.917483 | 7.019242 | 4.457564 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_06G0378200 | SBH | 1.950226 | 3.075568 | 4.4390705 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_06g0026610 | RBH | 0.065241 | 0.198445 | 0.481553 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_06G0435400 | RBH | 3.173635 | 8.5727615 | 6.9806765 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_06g0027090 | RBH | 0.178495 | 0.354712 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_06g0027170 | RBH | 0.247491 | 7.519544 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_06g0026770 | RBH | 3.243818 | 6.137406 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_06g0027420 | RBH | 0.085165 | 0.727984 | 0.214148 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_06g0027030 | RBH | 0.437617 | 2.695664 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_06G026930 | RBH | 0.283866 | 0.810584 | 0.324466 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_06g0021560 | SBH | 0.0 | 0.000000 | 2.985951 |
