Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os06g45300 | OGI:06077070 | 16/16 | Nipponbare | IRGSP 1.0 | MSU | Chr06:27384222-27386859 | ||||||||
| Gene Symbol | OsDPK3 | ||||||||||
| DNA seq | ATGAGCTTCTACGTTTTAATTGCATTCCCCGTAAAAGATAGTAGTACCAATGTTTCATAATCAGCATCCTTCCTAGCGTAGTTGTGAAAAAAAAAGGGAAAACAAAAAGGAGATCGTTGTGCGGTGCCTCGACGAGACGACGATATTTCCCCTTCCCCTCGTCGTCGCCTCCGACTCCGACTCCGACTCCTCGTGAGCTCGCCCCGCCGCCTGCGCCGCCGATCCCGCGAGGCGCGCCGCCGCCGTTCGTCCTGCTGCTTCCGCCGCATCCCGGTGAGCATCCATTCATCCTCTTCCTCATCGCTGTGTACCCACTCACTTTTTTTTTCCCTCCAATTTTGCGTTGAACCCTTTGGTTGTTCCTCTTCTAGACCTCGGAGGAAGCTTTTCTCTTAATTTGCCTTGAAAACTTGACACGAATAGTAGTTTGCTTGTTCCCCAAATTTTGCGTTGAACCCTTGTTGTTTCTCTTCTAGACCTCGGAGGAAGCTTTTCTCTTAATTTGCCTTGAAACTTGATACGAATAGTAGTTTGGTTGTTCCCCAAATAGTTTGGGGGTTCAGTTTATTAGATCCGCCCCTGTTTTAGCATAATTTTGATGGTATACTTTACTATATGCGTATTTAGGCGCTAATCAGTTTTTTGTTTTGATTCTAGATACCGTGGGAGCACTGAAGAAAACTGAGAAATGGATGTTTTTCAGCGATTCTACTGTTTCGTAAAGCAACCCTACTGTTAGTGTTGGTTGTTTGAAGATGATTGAGGGGTCAAGGTTTCAGAATATGTTGGGCGGTGCTGGAATTGGAGGTGGTATAGGTTGCAGAGGAAGGCAAGAAAACGAGATGAATGGCTTCCACAATATGCCCTACTACCACAAGGTCGGGGAGAGCTCCCACATGTCCGTGGATAACGCCGACAACCTGAACATGATGAACTTTGTTGGTGGTTCGGTTGCCATGTCGGTGGATAACAGCAGCGTGGGATCAAACGAGTCCCGCACGGTCATGCTCAAACACCCTGGCCTCCGTGATATGCCGGCGCCGAGTTATTCGGTTCACAATAGCGTCATCCATCCGAACCGGGCTATGGCGCCTACTCTGAATGAGGATGCATTGGCTCGGGTATTGATGGATCCAAGCCATCCGACGGAGATACTTAGTAATTACGAGGAGTGGACCATTGATCTGGGTAAGCTCGACATGGGAGCTCCTTTTGCTCAAGGGGCATTTGGGAAGCTTTATCGGGGAACATACAATGGAGAAGACGTTGCTATTAAGCTGCTGGAAAAGCCTGAGAATGACCCAGAGAGAGCTCAATTGATGGAACAGCAGTTTGTGCAGGAAGTTATGATGTTGTCTACGTTGAGGCACCCAAATATTGTAAGGTTCATTGGGGCGTGCCGGAAATCAATTGTTTGGTGTATCATTACTGAATATGCAAAAGGTGGATCTGTTCGGCAATTCCTTGCACGAAGGCAGAACAAGTCTGTGCCTCTGGGGCTGGCTGTGAAGCAGGCACTTGATGTTGCTCGGGGGATGGCTTATGTGCATGCCTTGCGATTTATCCATAGGGATCTAAAATCAGATAACCTTCTAATTTCAGCAGACAAATCCATCAAGATAGCTGACTTTGGAGTTGCTCGAATTGAGGTACAAACTGAGGGAATGACCCCAGAGACAGGAACCTACCGTTGGATGGCACCGTAAGTCATAATCACGCATTCACGCTCATTGCCTACTGTTTACCTTTTTAAATCTCTGTCAAATATGCTTATCTTGCCATCATGCAGGGAGATGATCCAGCACAGGCCTTATGATCATAAAGTAGATGTTTACAGCTTTGGGATTGTCTTGTGGGAGCTTATAACCGGCATGCTCCCCTTCACAAACATGACAGCCGTTCAGGCTGCATTTGCTGTCGTAAACAGGGGCTCTCGTCCTGCAATCCCGCAGGATTGTGTGGATTCTCTGAGCAAGATCATGACTTGCTGTTGGGACGCAAACCCTGAAGTTCGCCCATCATTTGCCGAGATCGTTGTCATGCTTGAGAATGCCGAGATAGAGGTTATGAGAAATGTCCGCAGGGCACGTTTCCGCTGTTGTATTGCGGGGCCAATGACCACAGACTGAAACTAATGCAGGATAGAGTACAGAAAAGAAAAAAGAAAAGAGAGAGGACACCATGATATCGGTCGCGTTTGCGTGCCGATATGGAAGTCTCATCCCTGGCCTTCAAGGTTTAAAATTGCTGATTTCTACTTTATCAAATATGGATGGTACCTTGTATGATTGTATATCTTAGCAAAGAGCCGTGTTATGTAATTCTCCGAAATGAGCTATCTTGTGAAATAATAGCAGCTGTATTTGCTGGTTGATCAGCAGCTGTTGTGTGTTCTTTGTCTGAAGCGTCGACCTACTTGTGGTCATCATCTCCTGGTCTTGTTGATTTGAGTCGGTTGTATATGCTGCCATTCTTTGCGCCTCCAAATCCATTTCATATTATTCTCCTTGTGTTGTTTTCCATATGGATCCATGATACTTATCTATGCCTATCATCTATGTCGAAGTCAAATCTAAAATGTATCTGCCGGTTCCACTCCGGTTTTTGATTATCCAGGTAAATTATGCAGATTTTCCAA
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| CDS seq | ATGATTGAGGGGTCAAGGTTTCAGAATATGTTGGGCGGTGCTGGAATTGGAGGTGGTATAGGTTGCAGAGGAAGGCAAGAAAACGAGATGAATGGCTTCCACAATATGCCCTACTACCACAAGGTCGGGGAGAGCTCCCACATGTCCGTGGATAACGCCGACAACCTGAACATGATGAACTTTGTTGGTGGTTCGGTTGCCATGTCGGTGGATAACAGCAGCGTGGGATCAAACGAGTCCCGCACGGTCATGCTCAAACACCCTGGCCTCCGTGATATGCCGGCGCCGAGTTATTCGGTTCACAATAGCGTCATCCATCCGAACCGGGCTATGGCGCCTACTCTGAATGAGGATGCATTGGCTCGGGTATTGATGGATCCAAGCCATCCGACGGAGATACTTAGTAATTACGAGGAGTGGACCATTGATCTGGGTAAGCTCGACATGGGAGCTCCTTTTGCTCAAGGGGCATTTGGGAAGCTTTATCGGGGAACATACAATGGAGAAGACGTTGCTATTAAGCTGCTGGAAAAGCCTGAGAATGACCCAGAGAGAGCTCAATTGATGGAACAGCAGTTTGTGCAGGAAGTTATGATGTTGTCTACGTTGAGGCACCCAAATATTGTAAGGTTCATTGGGGCGTGCCGGAAATCAATTGTTTGGTGTATCATTACTGAATATGCAAAAGGTGGATCTGTTCGGCAATTCCTTGCACGAAGGCAGAACAAGTCTGTGCCTCTGGGGCTGGCTGTGAAGCAGGCACTTGATGTTGCTCGGGGGATGGCTTATGTGCATGCCTTGCGATTTATCCATAGGGATCTAAAATCAGATAACCTTCTAATTTCAGCAGACAAATCCATCAAGATAGCTGACTTTGGAGTTGCTCGAATTGAGGTACAAACTGAGGGAATGACCCCAGAGACAGGAACCTACCGTTGGATGGCACCGGAGATGATCCAGCACAGGCCTTATGATCATAAAGTAGATGTTTACAGCTTTGGGATTGTCTTGTGGGAGCTTATAACCGGCATGCTCCCCTTCACAAACATGACAGCCGTTCAGGCTGCATTTGCTGTCGTAAACAGGGGCTCTCGTCCTGCAATCCCGCAGGATTGTGTGGATTCTCTGAGCAAGATCATGACTTGCTGTTGGGACGCAAACCCTGAAGTTCGCCCATCATTTGCCGAGATCGTTGTCATGCTTGAGAATGCCGAGATAGAGGTTATGAGAAATGTCCGCAGGGCACGTTTCCGCTGTTGTATTGCGGGGCCAATGACCACAGACTGA
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| Protein seq | MIEGSRFQNMLGGAGIGGGIGCRGRQENEMNGFHNMPYYHKVGESSHMSVDNADNLNMMNFVGGSVAMSVDNSSVGSNESRTVMLKHPGLRDMPAPSYSVHNSVIHPNRAMAPTLNEDALARVLMDPSHPTEILSNYEEWTIDLGKLDMGAPFAQGAFGKLYRGTYNGEDVAIKLLEKPENDPERAQLMEQQFVQEVMMLSTLRHPNIVRFIGACRKSIVWCIITEYAKGGSVRQFLARRQNKSVPLGLAVKQALDVARGMAYVHALRFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAPEMIQHRPYDHKVDVYSFGIVLWELITGMLPFTNMTAVQAAFAVVNRGSRPAIPQDCVDSLSKIMTCCWDANPEVRPSFAEIVVMLENAEIEVMRNVRRARFRCCIAGPMTTD |
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| Function | Serine/threonine-protein kinase STY13 [UniProtKB/Swiss-Prot:Q9ZQ31] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os06g45300 | LOC_Os06g45300.1 | Chr06 | 27384222 | 27386859 | + | MSU_osa1r7 | ||
| CDS seq | ATGATTGAGGGGTCAAGGTTTCAGAATATGTTGGGCGGTGCTGGAATTGGAGGTGGTATAGGTTGCAGAGGAAGGCAAGAAAACGAGATGAATGGCTTCCACAATATGCCCTACTACCACAAGGTCGGGGAGAGCTCCCACATGTCCGTGGATAACGCCGACAACCTGAACATGATGAACTTTGTTGGTGGTTCGGTTGCCATGTCGGTGGATAACAGCAGCGTGGGATCAAACGAGTCCCGCACGGTCATGCTCAAACACCCTGGCCTCCGTGATATGCCGGCGCCGAGTTATTCGGTTCACAATAGCGTCATCCATCCGAACCGGGCTATGGCGCCTACTCTGAATGAGGATGCATTGGCTCGGGTATTGATGGATCCAAGCCATCCGACGGAGATACTTAGTAATTACGAGGAGTGGACCATTGATCTGGGTAAGCTCGACATGGGAGCTCCTTTTGCTCAAGGGGCATTTGGGAAGCTTTATCGGGGAACATACAATGGAGAAGACGTTGCTATTAAGCTGCTGGAAAAGCCTGAGAATGACCCAGAGAGAGCTCAATTGATGGAACAGCAGTTTGTGCAGGAAGTTATGATGTTGTCTACGTTGAGGCACCCAAATATTGTAAGGTTCATTGGGGCGTGCCGGAAATCAATTGTTTGGTGTATCATTACTGAATATGCAAAAGGTGGATCTGTTCGGCAATTCCTTGCACGAAGGCAGAACAAGTCTGTGCCTCTGGGGCTGGCTGTGAAGCAGGCACTTGATGTTGCTCGGGGGATGGCTTATGTGCATGCCTTGCGATTTATCCATAGGGATCTAAAATCAGATAACCTTCTAATTTCAGCAGACAAATCCATCAAGATAGCTGACTTTGGAGTTGCTCGAATTGAGGTACAAACTGAGGGAATGACCCCAGAGACAGGAACCTACCGTTGGATGGCACCGGAGATGATCCAGCACAGGCCTTATGATCATAAAGTAGATGTTTACAGCTTTGGGATTGTCTTGTGGGAGCTTATAACCGGCATGCTCCCCTTCACAAACATGACAGCCGTTCAGGCTGCATTTGCTGTCGTAAACAGGGGCTCTCGTCCTGCAATCCCGCAGGATTGTGTGGATTCTCTGAGCAAGATCATGACTTGCTGTTGGGACGCAAACCCTGAAGTTCGCCCATCATTTGCCGAGATCGTTGTCATGCTTGAGAATGCCGAGATAGAGGTTATGAGAAATGTCCGCAGGGCACGTTTCCGCTGTTGTATTGCGGGGCCAATGACCACAGACTGA
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| Protein seq | MIEGSRFQNMLGGAGIGGGIGCRGRQENEMNGFHNMPYYHKVGESSHMSVDNADNLNMMNFVGGSVAMSVDNSSVGSNESRTVMLKHPGLRDMPAPSYSVHNSVIHPNRAMAPTLNEDALARVLMDPSHPTEILSNYEEWTIDLGKLDMGAPFAQGAFGKLYRGTYNGEDVAIKLLEKPENDPERAQLMEQQFVQEVMMLSTLRHPNIVRFIGACRKSIVWCIITEYAKGGSVRQFLARRQNKSVPLGLAVKQALDVARGMAYVHALRFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAPEMIQHRPYDHKVDVYSFGIVLWELITGMLPFTNMTAVQAAFAVVNRGSRPAIPQDCVDSLSKIMTCCWDANPEVRPSFAEIVVMLENAEIEVMRNVRRARFRCCIAGPMTTD
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os06g45300 | LOC_Os06g45300.2 | Chr06 | 27384328 | 27386859 | + | MSU_osa1r7 | ||
| CDS seq | ATGATTGAGGGGTCAAGGTTTCAGAATATGTTGGGCGGTGCTGGAATTGGAGGTGGTATAGGTTGCAGAGGAAGGCAAGAAAACGAGATGAATGGCTTCCACAATATGCCCTACTACCACAAGGTCGGGGAGAGCTCCCACATGTCCGTGGATAACGCCGACAACCTGAACATGATGAACTTTGTTGGTGGTTCGGTTGCCATGTCGGTGGATAACAGCAGCGTGGGATCAAACGAGTCCCGCACGGTCATGCTCAAACACCCTGGCCTCCGTGATATGCCGGCGCCGAGTTATTCGGTTCACAATAGCGTCATCCATCCGAACCGGGCTATGGCGCCTACTCTGAATGAGGATGCATTGGCTCGGGTATTGATGGATCCAAGCCATCCGACGGAGATACTTAGTAATTACGAGGAGTGGACCATTGATCTGGGTAAGCTCGACATGGGAGCTCCTTTTGCTCAAGGGGCATTTGGGAAGCTTTATCGGGGAACATACAATGGAGAAGACGTTGCTATTAAGCTGCTGGAAAAGCCTGAGAATGACCCAGAGAGAGCTCAATTGATGGAACAGCAGTTTGTGCAGGAAGTTATGATGTTGTCTACGTTGAGGCACCCAAATATTGTAAGGTTCATTGGGGCGTGCCGGAAATCAATTGTTTGGTGTATCATTACTGAATATGCAAAAGGTGGATCTGTTCGGCAATTCCTTGCACGAAGGCAGAACAAGTCTGTGCCTCTGGGGCTGGCTGTGAAGCAGGCACTTGATGTTGCTCGGGGGATGGCTTATGTGCATGCCTTGCGATTTATCCATAGGGATCTAAAATCAGATAACCTTCTAATTTCAGCAGACAAATCCATCAAGATAGCTGACTTTGGAGTTGCTCGAATTGAGGTACAAACTGAGGGAATGACCCCAGAGACAGGAACCTACCGTTGGATGGCACCGGAGATGATCCAGCACAGGCCTTATGATCATAAAGTAGATGTTTACAGCTTTGGGATTGTCTTGTGGGAGCTTATAACCGGCATGCTCCCCTTCACAAACATGACAGCCGTTCAGGCTGCATTTGCTGTCGTAAACAGGGGCTCTCGTCCTGCAATCCCGCAGGATTGTGTGGATTCTCTGAGCAAGATCATGACTTGCTGTTGGGACGCAAACCCTGAAGTTCGCCCATCATTTGCCGAGATCGTTGTCATGCTTGAGAATGCCGAGATAGAGGTTATGAGAAATGTCCGCAGGGCACGTTTCCGCTGTTGTATTGCGGGGCCAATGACCACAGACTGA
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| Protein seq | MIEGSRFQNMLGGAGIGGGIGCRGRQENEMNGFHNMPYYHKVGESSHMSVDNADNLNMMNFVGGSVAMSVDNSSVGSNESRTVMLKHPGLRDMPAPSYSVHNSVIHPNRAMAPTLNEDALARVLMDPSHPTEILSNYEEWTIDLGKLDMGAPFAQGAFGKLYRGTYNGEDVAIKLLEKPENDPERAQLMEQQFVQEVMMLSTLRHPNIVRFIGACRKSIVWCIITEYAKGGSVRQFLARRQNKSVPLGLAVKQALDVARGMAYVHALRFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAPEMIQHRPYDHKVDVYSFGIVLWELITGMLPFTNMTAVQAAFAVVNRGSRPAIPQDCVDSLSKIMTCCWDANPEVRPSFAEIVVMLENAEIEVMRNVRRARFRCCIAGPMTTD
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 3.049263 | 2.956597 | 1.602786 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_06g0663400 | RBH | 4.923651 | 4.575349 | 8.268353 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g07790 | RBH | 5.071517 | 4.909149 | 4.936442 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os06g0663400 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_06g0025380 | RBH | 1.252361 | 29.291389 | 8.311295 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_06g0025190 | RBH | 0.643911 | 4.688610 | 4.809019 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_06g0025360 | RBH | 2.708074 | 19.310209 | 13.725875 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_06g0024950 | RBH | 0.740818 | 0.334937 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_06g0025440 | RBH | 12.859282 | 11.326785 | 16.199810 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_06G0430000 | RBH | 19.212123 | 38.5692005 | 17.9162195 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_06g0024940 | RBH | 1.252606 | 1.329783 | 1.854391 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_06G0411700 | RBH | 20.2142125 | 34.7522755 | 22.899491 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_06g0025330 | RBH | 0.841294 | 0.559128 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_06g0025350 | RBH | 1.040197 | 19.836767 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_06g0024980 | RBH | 10.559392 | 29.916800 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_06g0025580 | RBH | 2.300620 | 1.411861 | 3.055265 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_06g0025240 | RBH | 0.801159 | 6.123591 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_06G025100 | RBH | 1.435862 | 3.309655 | 4.594703 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_06g0025210 | RBH | 4.165545 | 18.816261 | 13.826924 |
