Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os06g41070 | OGI:06069510 | 16/16 | Nipponbare | IRGSP 1.0 | MSU | Chr06:24531826-24533798 | ||||||||
| Gene Symbol | CYP93F1, OsCYP93F1 | ||||||||||
| DNA seq | GACAGTGAATATTTGTTTATATGGCTGAATCATTTTATATCTGACATGTAAGAAAATGATAGTACATCCCTTCGCGGACTGAAATACAGAAATAGTTTCCCCACAAATGCAGAACCCAACTGCACTTCTTTTTTTCATATCGGAGAATATATCCAAGTGCACTAGATGAAACCGTGAACTGCATCTGCCTTATATGGGCGATTAATAGCGCGGCAGGACAAATCCTAGCCGTCCATCCAAAATCCAACTCACGTCAGCGATGCTGACGCAGCAGCCGGCAGCGGGTGTATCCGCGGCGAGACGGTGCAGACGAGCGGGCGCTTCCGCGGCAGCGTCAGCCCGGGCCCCTCCTCCATGTCCACCGGCGCGCCGCCGACGGGGCTCCACTCGAAGCACTGCACCATGGCGGCCAGCGCCGCCTGCACCACCAGCATCGCCAGCGACGCGCCGGGGCAGATCCGCCGCCCCGACCCGAACGGCAGCAGGTGGAAGTGCTGCCCGCGCACGTCCGCCGCCGTCCCGCCGCCGCCGCCGCCGGAGACGAACCTCTCCGGCCGGAACGCCGTCGGCTCCGGCCACCACGCCGCGTCGCGGCCGATCGCCCACACGTTCACGAACACCGTGGCGCCCGCCGGGACGTCGTAGCCGGCCACCGTGGCGCGCTCCAGCGAGCGCCGCACCACGAGCGGGCCCGTCGGGTGCAGCCGCAGCGTCTCCTTCGCCACGGCCTGCAGGTACGGGAGGCTCGGGATGTCCGACTCGTCGGCGAGCCGCGCGCCGCCGACCACCGCGTCGAGCTCCGCCTGTAGCTTGCGGAGGACGGGCGGGTTGTTGATTAGCTCTGACAGCGCCCACTCCAGCGTGATCGTCGTCGTGTCCGTCCCCGCCGCGAAGATGTCCTGGCACACGAGATCTCGATCGATCATGGAGTTCTTGAGGTGTTCGACCGTGGTCTATCTGAGGTTTAGTATTACCAGCATGAACGCCTTGATGTTGTCTCTGGTGAGACGCATCTCGGCGGCTTCGTCTTCGTGCATGTCGAAGAGCATGTCAAGGAGGTCCTTCTCGTCGTCCTCGCCGTCGGCCGCCGCTTGCCGGCGTAGCTTCCTCTTGGCTTCCCTCGCCGTCAGTATCCGCTCCATCATGGCGTCGAACTTGCGGTGCACCGCATCGATGCGCTTGCCGAGCCCCTGCACGTCCCAGTACTTGAAGACGCCGATGTAGTCCTGCAGGTTGAACGTGCCGGTGAGCTCCGCCGTCTCGGCGACCACGCTCCGCATCTCCTCCGCGTCGTTGTCGTCGCCGGTCCACCGCCGGCCCATCACCATGCGGGAGACGATGTCGCCGGTGAGGCCCATGAGCGCGGCGTCGACGTCGACGCGCTCGCCGCCGTCGGCGCTCGCGCGGAGCGAGCCGACGAGGCGCGCCACCTCCTCGCGGCGGACGTGGCGGAGCCGGTCGAGCGTTCGTCCGGCGAGGAGCTCGTGCACGCACGCGCGCTTCATGAAGCGCCAGTAGGGCCCGTACGCCGAGAAGGAGAAGTCCTGGCCGCCGTAGGTGAGGCGGTGGACGGCGGCGGGCTTGGGGCGGTCGAGGAACGCGGCCTCGTGGGTCTTGAGCACCTCGCGGGCGGCGTCCGGCGAGCAGGCGGCGACGCAGGGGACGGAGCCGAGGCGGAGGAAGAGGAGCGGGCCGTGGCGCGCGGCGAGGCGGTGGAGCGCCTGGTGCGGCAGCGGCGCGAGCAGGTGGAGGTGGCCCAGGATGGGCAGCCCGAACGGGCTCGGCGGGAGGCGCAGGCCGCTGCTCCGGCGGTGGCGGCGGCGGCGGCGGAGCGCGTAGAGAACAATCAGGCCGGCGACGAAGAGGAGGAGAGGCTTGAAGAGACCTCGAGCTACCAGCTGATGATCCATGGCGACGAAGAGCTTGGTTAATTTGACTACTCACTGTGTCACTCAGCTTAGCTAGCTATGCCT
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| CDS seq | ATGGATCATCAGCTGGTAGCTCGAGGTCTCTTCAAGCCTCTCCTCCTCTTCGTCGCCGGCCTGATTGTTCTCTACGCGCTCCGCCGCCGCCGCCGCCACCGCCGGAGCAGCGGCCTGCGCCTCCCGCCGAGCCCGTTCGGGCTGCCCATCCTGGGCCACCTCCACCTGCTCGCGCCGCTGCCGCACCAGGCGCTCCACCGCCTCGCCGCGCGCCACGGCCCGCTCCTCTTCCTCCGCCTCGGCTCCGTCCCCTGCGTCGCCGCCTGCTCGCCGGACGCCGCCCGCGAGGTGCTCAAGACCCACGAGGCCGCGTTCCTCGACCGCCCCAAGCCCGCCGCCGTCCACCGCCTCACCTACGGCGGCCAGGACTTCTCCTTCTCGGCGTACGGGCCCTACTGGCGCTTCATGAAGCGCGCGTGCGTGCACGAGCTCCTCGCCGGACGAACGCTCGACCGGCTCCGCCACGTCCGCCGCGAGGAGGTGGCGCGCCTCGTCGGCTCGCTCCGCGCGAGCGCCGACGGCGGCGAGCGCGTCGACGTCGACGCCGCGCTCATGGGCCTCACCGGCGACATCGTCTCCCGCATGGTGATGGGCCGGCGGTGGACCGGCGACGACAACGACGCGGAGGAGATGCGGAGCGTGGTCGCCGAGACGGCGGAGCTCACCGGCACGTTCAACCTGCAGGACTACATCGGCGTCTTCAAGTACTGGGACGTGCAGGGGCTCGGCAAGCGCATCGATGCGGTGCACCGCAAGTTCGACGCCATGATGGAGCGGATACTGACGGCGAGGGAAGCCAAGAGGAAGCTACGCCGGCAAGCGGCGGCCGACGGCGAGGACGACGAGAAGGACCTCCTTGACATGCTCTTCGACATGCACGAAGACGAAGCCGCCGAGATGCGTCTCACCAGAGACAACATCAAGGCGTTCATGCTGGACATCTTCGCGGCGGGGACGGACACGACGACGATCACGCTGGAGTGGGCGCTGTCAGAGCTAATCAACAACCCGCCCGTCCTCCGCAAGCTACAGGCGGAGCTCGACGCGGTGGTCGGCGGCGCGCGGCTCGCCGACGAGTCGGACATCCCGAGCCTCCCGTACCTGCAGGCCGTGGCGAAGGAGACGCTGCGGCTGCACCCGACGGGCCCGCTCGTGGTGCGGCGCTCGCTGGAGCGCGCCACGGTGGCCGGCTACGACGTCCCGGCGGGCGCCACGGTGTTCGTGAACGTGTGGGCGATCGGCCGCGACGCGGCGTGGTGGCCGGAGCCGACGGCGTTCCGGCCGGAGAGGTTCGTCTCCGGCGGCGGCGGCGGCGGGACGGCGGCGGACGTGCGCGGGCAGCACTTCCACCTGCTGCCGTTCGGGTCGGGGCGGCGGATCTGCCCCGGCGCGTCGCTGGCGATGCTGGTGGTGCAGGCGGCGCTGGCCGCCATGGTGCAGTGCTTCGAGTGGAGCCCCGTCGGCGGCGCGCCGGTGGACATGGAGGAGGGGCCCGGGCTGACGCTGCCGCGGAAGCGCCCGCTCGTCTGCACCGTCTCGCCGCGGATACACCCGCTGCCGGCTGCTGCGTCAGCATCGCTGACGTGA
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| Protein seq | MDHQLVARGLFKPLLLFVAGLIVLYALRRRRRHRRSSGLRLPPSPFGLPILGHLHLLAPLPHQALHRLAARHGPLLFLRLGSVPCVAACSPDAAREVLKTHEAAFLDRPKPAAVHRLTYGGQDFSFSAYGPYWRFMKRACVHELLAGRTLDRLRHVRREEVARLVGSLRASADGGERVDVDAALMGLTGDIVSRMVMGRRWTGDDNDAEEMRSVVAETAELTGTFNLQDYIGVFKYWDVQGLGKRIDAVHRKFDAMMERILTAREAKRKLRRQAAADGEDDEKDLLDMLFDMHEDEAAEMRLTRDNIKAFMLDIFAAGTDTTTITLEWALSELINNPPVLRKLQAELDAVVGGARLADESDIPSLPYLQAVAKETLRLHPTGPLVVRRSLERATVAGYDVPAGATVFVNVWAIGRDAAWWPEPTAFRPERFVSGGGGGGTAADVRGQHFHLLPFGSGRRICPGASLAMLVVQAALAAMVQCFEWSPVGGAPVDMEEGPGLTLPRKRPLVCTVSPRIHPLPAAASASLT |
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| Function | 3,9-dihydroxypterocarpan 6A-monooxygenase [UniProtKB/Swiss-Prot:Q42798] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os06g41070 | LOC_Os06g41070.1 | Chr06 | 24531826 | 24533798 | - | MSU_osa1r7 | ||
| CDS seq | ATGGATCATCAGCTGGTAGCTCGAGGTCTCTTCAAGCCTCTCCTCCTCTTCGTCGCCGGCCTGATTGTTCTCTACGCGCTCCGCCGCCGCCGCCGCCACCGCCGGAGCAGCGGCCTGCGCCTCCCGCCGAGCCCGTTCGGGCTGCCCATCCTGGGCCACCTCCACCTGCTCGCGCCGCTGCCGCACCAGGCGCTCCACCGCCTCGCCGCGCGCCACGGCCCGCTCCTCTTCCTCCGCCTCGGCTCCGTCCCCTGCGTCGCCGCCTGCTCGCCGGACGCCGCCCGCGAGGTGCTCAAGACCCACGAGGCCGCGTTCCTCGACCGCCCCAAGCCCGCCGCCGTCCACCGCCTCACCTACGGCGGCCAGGACTTCTCCTTCTCGGCGTACGGGCCCTACTGGCGCTTCATGAAGCGCGCGTGCGTGCACGAGCTCCTCGCCGGACGAACGCTCGACCGGCTCCGCCACGTCCGCCGCGAGGAGGTGGCGCGCCTCGTCGGCTCGCTCCGCGCGAGCGCCGACGGCGGCGAGCGCGTCGACGTCGACGCCGCGCTCATGGGCCTCACCGGCGACATCGTCTCCCGCATGGTGATGGGCCGGCGGTGGACCGGCGACGACAACGACGCGGAGGAGATGCGGAGCGTGGTCGCCGAGACGGCGGAGCTCACCGGCACGTTCAACCTGCAGGACTACATCGGCGTCTTCAAGTACTGGGACGTGCAGGGGCTCGGCAAGCGCATCGATGCGGTGCACCGCAAGTTCGACGCCATGATGGAGCGGATACTGACGGCGAGGGAAGCCAAGAGGAAGCTACGCCGGCAAGCGGCGGCCGACGGCGAGGACGACGAGAAGGACCTCCTTGACATGCTCTTCGACATGCACGAAGACGAAGCCGCCGAGATGCGTCTCACCAGAGACAACATCAAGGCGTTCATGCTGGACATCTTCGCGGCGGGGACGGACACGACGACGATCACGCTGGAGTGGGCGCTGTCAGAGCTAATCAACAACCCGCCCGTCCTCCGCAAGCTACAGGCGGAGCTCGACGCGGTGGTCGGCGGCGCGCGGCTCGCCGACGAGTCGGACATCCCGAGCCTCCCGTACCTGCAGGCCGTGGCGAAGGAGACGCTGCGGCTGCACCCGACGGGCCCGCTCGTGGTGCGGCGCTCGCTGGAGCGCGCCACGGTGGCCGGCTACGACGTCCCGGCGGGCGCCACGGTGTTCGTGAACGTGTGGGCGATCGGCCGCGACGCGGCGTGGTGGCCGGAGCCGACGGCGTTCCGGCCGGAGAGGTTCGTCTCCGGCGGCGGCGGCGGCGGGACGGCGGCGGACGTGCGCGGGCAGCACTTCCACCTGCTGCCGTTCGGGTCGGGGCGGCGGATCTGCCCCGGCGCGTCGCTGGCGATGCTGGTGGTGCAGGCGGCGCTGGCCGCCATGGTGCAGTGCTTCGAGTGGAGCCCCGTCGGCGGCGCGCCGGTGGACATGGAGGAGGGGCCCGGGCTGACGCTGCCGCGGAAGCGCCCGCTCGTCTGCACCGTCTCGCCGCGGATACACCCGCTGCCGGCTGCTGCGTCAGCATCGCTGACGTGA
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| Protein seq | MDHQLVARGLFKPLLLFVAGLIVLYALRRRRRHRRSSGLRLPPSPFGLPILGHLHLLAPLPHQALHRLAARHGPLLFLRLGSVPCVAACSPDAAREVLKTHEAAFLDRPKPAAVHRLTYGGQDFSFSAYGPYWRFMKRACVHELLAGRTLDRLRHVRREEVARLVGSLRASADGGERVDVDAALMGLTGDIVSRMVMGRRWTGDDNDAEEMRSVVAETAELTGTFNLQDYIGVFKYWDVQGLGKRIDAVHRKFDAMMERILTAREAKRKLRRQAAADGEDDEKDLLDMLFDMHEDEAAEMRLTRDNIKAFMLDIFAAGTDTTTITLEWALSELINNPPVLRKLQAELDAVVGGARLADESDIPSLPYLQAVAKETLRLHPTGPLVVRRSLERATVAGYDVPAGATVFVNVWAIGRDAAWWPEPTAFRPERFVSGGGGGGTAADVRGQHFHLLPFGSGRRICPGASLAMLVVQAALAAMVQCFEWSPVGGAPVDMEEGPGLTLPRKRPLVCTVSPRIHPLPAAASASLT
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.000000 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_06g0613600 | RBH | 0.0 | 0.0 | 0.000000 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g11020 | SBH | 0.0 | 0.000000 | 0.000000 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os06g0613600 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_06g0022340 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_06g0022190 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_06g0022290 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_06g0022010 | RBH | 0.0 | 0.031111 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_06g0022420 | RBH | 0.000000 | 0.0 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_06G0386100 | RBH | 0.1510595 | 0.5606275 | 0.00701 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_06g0021870 | RBH | 0.000000 | 0.0 | 0.000000 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_06G0366100 | RBH | 0.134668 | 0.1058555 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_06g0022330 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_06g0022250 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_06g0021940 | RBH | 0.000000 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_06g0022610 | RBH | 0.0 | 0.125911 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_06g0022200 | RBH | 0.000000 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_06G021970 | RBH | 0.0 | 0.935110 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_06g0022170 | RBH | 0.274076 | 0.0 | 0.0 |
