Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
LOC_Os06g29410 OGI:06038570 | 3/16 Nipponbare | IRGSP 1.0 | MSU Chr06:16839618-16842706
Gene Symbol ML2, OsML2
DNA seq

TTACATCATCACAGTTGCATAATAAGTGTTCATCATTGCCTAAACATAAAAGTTCAACATTGTTCATCATTTTAGTTTAAGCCTAAACATTCCTTTGGGATTAATTATTTCACGGAGGATGAAGCTGGCTATCTCCTCGCGAACCTCCTCAAAGCTGGTAGGCAGAGACTTGGTTATTGTGCCCTACATTGTCATAATTCCAGATTAGTTGATCGATCATATATAAGTACTAAAATGTAGTTAGTCTATCACAATTGAGACCACCGACCTCAAACTCAGCCAAAGTCTTCACCTTTTCTCTATATAGAAGGCGCATGTTGTGGCACACATGGAATCCGCACTGGTCACCTATTTGTTGCTTCACCGGGAAGTCTTTTTTGTGGATGAGGGTGTCATGTCTTGTCTTCCTGAGGCCTCCTCTTTGCATGTATTGGGCCCACGCTTCATCTATCGCTAGTTGAATTGGGGTCCAATCATATGTGTTCTTATCAATTCTGGAGTTCAGGTAGTGACATGTACTCCACTTAGGTGTTATGACCAGAAGGATCCAATGGGCACTGCGGCATTAACATAGTGAAAGTTAATTAAGTACTCAAGGAATGTGTCATGCTGTTGTGTATATTTAGTTAACACACTTACTATTGATTATAGGCGCACATAATGTACTCCTTGTCTCGGCGGGACCACAAGGTGTCGTAGATGTAGTTGACCATTCCTTGATGGTCATTCTGGAGATTTGTGACAGTGACCACTTGTGGATCAAGGAAGGCAACTTCCGGTGCATGCTTCTGACACCATTGCCAACTTAACCTACATACAGGATAAACGATCTTGTAAGCAAGTTAAACTGATTGTTATTACCAGATTGAGTTGGGCGACAATACTTACAAGGAGTAGCACTTAAGGAGGCTTGTGTCCACCGCTCGGAGCCTGTAGAGGTCGAAAAGATCCTTAAAGTCGACCACGATATAATTTGTTGAACCAAGGAATGGCTTTCCATCGTGCTCTCCAAGGATATCGGTAGCTTTACTTGGCTTCCTGGCGTTAAATTTCTCCATGTAGTAGTGAAGGTCCTTGCAAGCGGTTCCCATTGCGGCAAGCACGTCATCTCCAACCAATGGCATGCCTAGTTGGAACTCCTGTGGAGCGACGTATTTCTTCTTGACCTCTTTGCCCTTAGTCTCTTCCTGGCCCTTGCCCAGATCTAGCTTCCTTAGAGCTAGAAGCGAGGCCTGCACCTTTCCTCCCCTTCCTCTCCCCTTTGCTTCAGGTTTATCGAGAGTAATTCTCTGAGGGGAAGAGTGTACCTTCCTGCTCTTCTTCATCGGTGGGGGTTCATGAATCGCCTTGCTGTCGGCCTCCGTTCGGTCCTCCCCAAAATCTGTGTCGTACTGCAACTGCACATCGTAAGATTGTGCATGATGATCTTGAGCAGGAGGGGCTGAAGGAGCAGAGGCGGGTCTCTTTGGTGGACGACCGCCTGGTGCAGTGGTTGGCCTCGCTGTAACCTTGATCTCAATGAGGTCCTTGGGCCATTGGATGAAGGTACCACGGGCATTTCCTAGTGAGAGAACCTCGTCGTTCGATGGATACTTCAGAGGGAACAGCTCGTATTCGGGCTTCACCGAATCGACTTGAACTTTTGCACAGTCGGCCCTGAGTTGTGCTCCATGCACTCTTGTCTCTGGGGTCGGCTTGTACGCAAGTCCCTCGGCTGCTGGAACTGTGAAGGTCGGCATCACCCTAACTGTGAGGGTGCAGCTCGTTAGTTCCTGCGATAGATTAATCAATTTTTTTAGAATATTATATATCATATGGATTCGTTAAGTTTTTCATGTATTGAGTAAGTTCACGGTTACCATTATATGGTCGACGGCGCTGTCGACTGATGTTGGATTTTCCGCCAACTCAGTTGATGCACAACTGCTGCGTTTTTGGGTGGGACTTCCTAACTCTTCGTGCGCAGCAGCGGCGGCCTGGGGGTTCTGTTGCTCTTCTCGGATCTCTTGCCTAATCTTGGCCCTCATCGACTCGAGCTTTTCGTCGAATTCAGATGTCAGCTCAGCTTTTATCGACGCCCGGATCTTGGCTTCAAGGCGTGCATCTTTCTCCGCCTTGTTGGAAGTCCACTTCTTGTACTGCCACGCGTTTTCTGGAAATCCATACTTCCAGGGAACAGAAGACCCAACGCCCCGTGTCCGTCCACGGTGTTCCTTGTTGCCCAACGCTTTCGTGAGGAGGTCGTCCTCGCGTCTTTGAGAGTAGGCCTCTTGCGAGGCTTGTTGCTCGGCAACCAACTCCTTCTGCATTACAATTTAGTGGGGTTAAATAAACTGCACGATGGGAAACAATGCGAACATCTAGTTTGACTAGAGACTTACAATAGCTTCGTATACTCGTTGATCTTCTACATTTGACATGAAGATTGTGCCATCATCATTCTTCTGGTACCTAGCCCTGGCCCAGTTCCTAGCCCGAGAGTGTGGGATATCGCCAAAGACAAGCGGTGTGCACGATTGAGATGCTTCTTCATCCTCACGCTGCCATTCCTCATCCTTACCGGCATATCCGGCGGTGCCAAGCTGGTGCGGATGCTGGTTCCTGGTCTGGAGCAAGCGATATGCCTTGCTTCTAGCTCTGGACTCGGGGGTCGACTTCTTCACATGGAATTCCTCCCAGACCTGTTCCGTGATCCAAGAAAATTTCTCTCTTGGATCTGGATTCACCGGGTTGTAGACAAACTCGCCGACTAGCTTAGTCTTGAAGTTCTTCCAAGCATTGCCCATAACCTGGAAAGCAGCCCGCCTGAGACGGTCCTCAAGCTCCGCAGGATAATCAAAGCTCTCCTTGAACGTTAGCCAAGCAATGTCCTTCTCTGCGGCCGGCACGAGCTTGATGTCATCTTGCAGAATACTGAATTTCTGCCTCCCTATGACCCCGCAGATAGACCTAAATCGGCTCAATGTTTTCCTTGGAGATGTCGGCAACCCTACGGCGTCCACCGCTGTTATGCGGAACTGTTCCTTAGGGATTTTGTTCCCTGTCCTAGGAGTACGTGCCCTTGAGGACTCACTAGTTGTCGTCGACAT

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CDS seq

ATGTCGACGACAACTAGTGAGTCCTCAAGGGCACGTACTCCTAGGACAGGGAACAAAATCCCTAAGGAACAGTTCCGCATAACAGCGGTGGACGCCGTAGGGTTGCCGACATCTCCAAGGAAAACATTGAGCCGATTTAGGTCTATCTGCGGGGTCATAGGGAGGCAGAAATTCAGTATTCTGCAAGATGACATCAAGCTCGTGCCGGCCGCAGAGAAGGACATTGCTTGGCTAACGTTCAAGGAGAGCTTTGATTATCCTGCGGAGCTTGAGGACCGTCTCAGGCGGGCTGCTTTCCAGGTTATGGGCAATGCTTGGAAGAACTTCAAGACTAAGCTAGTCGGCGAGTTTGTCTACAACCCGGTGAATCCAGATCCAAGAGAGAAATTTTCTTGGATCACGGAACAGGTCTGGGAGGAATTCCATGTGAAGAAGTCGACCCCCGAGTCCAGAGCTAGAAGCAAGGCATATCGCTTGCTCCAGACCAGGAACCAGCATCCGCACCAGCTTGGCACCGCCGGATATGCCGGTAAGGATGAGGAATGGCAGCGTGAGGATGAAGAAGCATCTCAATCGTGCACACCGCTTGTCTTTGGCGATATCCCACACTCTCGGGCTAGGAACTGGGCCAGGGCTAGGTACCAGAAGAATGATGATGGCACAATCTTCATGTCAAATGTAGAAGATCAACGAGTATACGAAGCTATTAAGGAGTTGGTTGCCGAGCAACAAGCCTCGCAAGAGGCCTACTCTCAAAGACGCGAGGACGACCTCCTCACGAAAGCGTTGGGCAACAAGGAACACCGTGGACGGACACGGGGCGTTGGGTCTTCTGTTCCCTGGAAGTATGGATTTCCAGAAAACGCGTGGCAGTACAAGAAGTGGACTTCCAACAAGGCGGAGAAAGATGCACGCCTTGAAGCCAAGATCCGGGCGTCGATAAAAGCTGAGCTGACATCTGAATTCGACGAAAAGCTCGAGTCGATGAGGGCCAAGATTAGGCAAGAGATCCGAGAAGAGCAACAGAACCCCCAGGCCGCCGCTGCTGCGCACGAAGAGTTAGGAAGTCCCACCCAAAAACGCAGCAGTTGTGCATCAACTGAGTTGGCGGAAAATCCAACATCAGTCGACAGCGCCGTCGACCATATAATGGAACTAACGAGCTGCACCCTCACAGTTAGGGTGATGCCGACCTTCACAGTTCCAGCAGCCGAGGGACTTGCGTACAAGCCGACCCCAGAGACAAGAGTGCATGGAGCACAACTCAGGGCCGACTGTGCAAAAGTTCAAGTCGATTCGGTGAAGCCCGAATACGAGCTGTTCCCTCTGAAGTATCCATCGAACGACGAGGTTCTCTCACTAGGAAATGCCCGTGGTACCTTCATCCAATGGCCCAAGGACCTCATTGAGATCAAGGTTACAGCGAGGCCAACCACTGCACCAGGCGGTCGTCCACCAAAGAGACCCGCCTCTGCTCCTTCAGCCCCTCCTGCTCAAGATCATCATGCACAATCTTACGATGTGCAGTTGCAGTACGACACAGATTTTGGGGAGGACCGAACGGAGGCCGACAGCAAGGCGATTCATGAACCCCCACCGATGAAGAAGAGCAGGAAGGTACACTCTTCCCCTCAGAGAATTACTCTCGATAAACCTGAAGCAAAGGGGAGAGGAAGGGGAGGAAAGGTGCAGGCCTCGCTTCTAGCTCTAAGGAAGCTAGATCTGGGCAAGGGCCAGGAAGAGACTAAGGGCAAAGAGGTCAAGAAGAAATACGTCGCTCCACAGGAGTTCCAACTAGGCATGCCATTGGTTGGAGATGACGTGCTTGCCGCAATGGGAACCGCTTGCAAGGACCTTCACTACTACATGGAGAAATTTAACGCCAGGAAGCCAAGTAAAGCTACCGATATCCTTGGAGAGCACGATGGAAAGCCATTCCTTGGTTCAACAAATTATATCGTGGTCGACTTTAAGGATCTTTTCGACCTCTACAGGCTCCGAGCGGTGGACACAAGCCTCCTTAAGTGCTACTCCTTGTTAAGTTGGCAATGGTGTCAGAAGCATGCACCGGAAGTTGCCTTCCTTGATCCACAAGTGGTCACTGTCACAAATCTCCAGAATGACCATCAAGGAATGGTCAACTACATCTACGACACCTTGTGGTCCCGCCGAGACAAGGAGTACATTATGTGCGCCTATAATCAATATGCCCATTGGATCCTTCTGGTCATAACACCTAAGTGGAGTACATGTCACTACCTGAACTCCAGAATTGATAAGAACACATATGATTGGACCCCAATTCAACTAGCGATAGATGAAGCGTGGGCCCAATACATGCAAAGAGGAGGCCTCAGGAAGACAAGACATGACACCCTCATCCACAAAAAAGACTTCCCGGTGAAGCAACAAATAGGTGACCAGTGCGGATTCCATGTGTGCCACAACATGCGCCTTCTATATAGAGAAAAGGTGAAGACTTTGGCTGAGTTTGAGGGCACAATAACCAAGTCTCTGCCTACCAGCTTTGAGGAGGCAATGATGAACACTTATTATGCAACTGTGATGATGTAA

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Protein seq

MSTTTSESSRARTPRTGNKIPKEQFRITAVDAVGLPTSPRKTLSRFRSICGVIGRQKFSILQDDIKLVPAAEKDIAWLTFKESFDYPAELEDRLRRAAFQVMGNAWKNFKTKLVGEFVYNPVNPDPREKFSWITEQVWEEFHVKKSTPESRARSKAYRLLQTRNQHPHQLGTAGYAGKDEEWQREDEEASQSCTPLVFGDIPHSRARNWARARYQKNDDGTIFMSNVEDQRVYEAIKELVAEQQASQEAYSQRREDDLLTKALGNKEHRGRTRGVGSSVPWKYGFPENAWQYKKWTSNKAEKDARLEAKIRASIKAELTSEFDEKLESMRAKIRQEIREEQQNPQAAAAAHEELGSPTQKRSSCASTELAENPTSVDSAVDHIMELTSCTLTVRVMPTFTVPAAEGLAYKPTPETRVHGAQLRADCAKVQVDSVKPEYELFPLKYPSNDEVLSLGNARGTFIQWPKDLIEIKVTARPTTAPGGRPPKRPASAPSAPPAQDHHAQSYDVQLQYDTDFGEDRTEADSKAIHEPPPMKKSRKVHSSPQRITLDKPEAKGRGRGGKVQASLLALRKLDLGKGQEETKGKEVKKKYVAPQEFQLGMPLVGDDVLAAMGTACKDLHYYMEKFNARKPSKATDILGEHDGKPFLGSTNYIVVDFKDLFDLYRLRAVDTSLLKCYSLLSWQWCQKHAPEVAFLDPQVVTVTNLQNDHQGMVNYIYDTLWSRRDKEYIMCAYNQYAHWILLVITPKWSTCHYLNSRIDKNTYDWTPIQLAIDEAWAQYMQRGGLRKTRHDTLIHKKDFPVKQQIGDQCGFHVCHNMRLLYREKVKTLAEFEGTITKSLPTSFEEAMMNTYYATVMM

Function -

Transcripts

Gene Transcript Chromosome Start End Strand Source
LOC_Os06g29410 LOC_Os06g29410.1 Chr06 16839618 16842706 - MSU_osa1r7
CDS seq

ATGTCGACGACAACTAGTGAGTCCTCAAGGGCACGTACTCCTAGGACAGGGAACAAAATCCCTAAGGAACAGTTCCGCATAACAGCGGTGGACGCCGTAGGGTTGCCGACATCTCCAAGGAAAACATTGAGCCGATTTAGGTCTATCTGCGGGGTCATAGGGAGGCAGAAATTCAGTATTCTGCAAGATGACATCAAGCTCGTGCCGGCCGCAGAGAAGGACATTGCTTGGCTAACGTTCAAGGAGAGCTTTGATTATCCTGCGGAGCTTGAGGACCGTCTCAGGCGGGCTGCTTTCCAGGTTATGGGCAATGCTTGGAAGAACTTCAAGACTAAGCTAGTCGGCGAGTTTGTCTACAACCCGGTGAATCCAGATCCAAGAGAGAAATTTTCTTGGATCACGGAACAGGTCTGGGAGGAATTCCATGTGAAGAAGTCGACCCCCGAGTCCAGAGCTAGAAGCAAGGCATATCGCTTGCTCCAGACCAGGAACCAGCATCCGCACCAGCTTGGCACCGCCGGATATGCCGGTAAGGATGAGGAATGGCAGCGTGAGGATGAAGAAGCATCTCAATCGTGCACACCGCTTGTCTTTGGCGATATCCCACACTCTCGGGCTAGGAACTGGGCCAGGGCTAGGTACCAGAAGAATGATGATGGCACAATCTTCATGTCAAATGTAGAAGATCAACGAGTATACGAAGCTATTAAGGAGTTGGTTGCCGAGCAACAAGCCTCGCAAGAGGCCTACTCTCAAAGACGCGAGGACGACCTCCTCACGAAAGCGTTGGGCAACAAGGAACACCGTGGACGGACACGGGGCGTTGGGTCTTCTGTTCCCTGGAAGTATGGATTTCCAGAAAACGCGTGGCAGTACAAGAAGTGGACTTCCAACAAGGCGGAGAAAGATGCACGCCTTGAAGCCAAGATCCGGGCGTCGATAAAAGCTGAGCTGACATCTGAATTCGACGAAAAGCTCGAGTCGATGAGGGCCAAGATTAGGCAAGAGATCCGAGAAGAGCAACAGAACCCCCAGGCCGCCGCTGCTGCGCACGAAGAGTTAGGAAGTCCCACCCAAAAACGCAGCAGTTGTGCATCAACTGAGTTGGCGGAAAATCCAACATCAGTCGACAGCGCCGTCGACCATATAATGGAACTAACGAGCTGCACCCTCACAGTTAGGGTGATGCCGACCTTCACAGTTCCAGCAGCCGAGGGACTTGCGTACAAGCCGACCCCAGAGACAAGAGTGCATGGAGCACAACTCAGGGCCGACTGTGCAAAAGTTCAAGTCGATTCGGTGAAGCCCGAATACGAGCTGTTCCCTCTGAAGTATCCATCGAACGACGAGGTTCTCTCACTAGGAAATGCCCGTGGTACCTTCATCCAATGGCCCAAGGACCTCATTGAGATCAAGGTTACAGCGAGGCCAACCACTGCACCAGGCGGTCGTCCACCAAAGAGACCCGCCTCTGCTCCTTCAGCCCCTCCTGCTCAAGATCATCATGCACAATCTTACGATGTGCAGTTGCAGTACGACACAGATTTTGGGGAGGACCGAACGGAGGCCGACAGCAAGGCGATTCATGAACCCCCACCGATGAAGAAGAGCAGGAAGGTACACTCTTCCCCTCAGAGAATTACTCTCGATAAACCTGAAGCAAAGGGGAGAGGAAGGGGAGGAAAGGTGCAGGCCTCGCTTCTAGCTCTAAGGAAGCTAGATCTGGGCAAGGGCCAGGAAGAGACTAAGGGCAAAGAGGTCAAGAAGAAATACGTCGCTCCACAGGAGTTCCAACTAGGCATGCCATTGGTTGGAGATGACGTGCTTGCCGCAATGGGAACCGCTTGCAAGGACCTTCACTACTACATGGAGAAATTTAACGCCAGGAAGCCAAGTAAAGCTACCGATATCCTTGGAGAGCACGATGGAAAGCCATTCCTTGGTTCAACAAATTATATCGTGGTCGACTTTAAGGATCTTTTCGACCTCTACAGGCTCCGAGCGGTGGACACAAGCCTCCTTAAGTGCTACTCCTTGTTAAGTTGGCAATGGTGTCAGAAGCATGCACCGGAAGTTGCCTTCCTTGATCCACAAGTGGTCACTGTCACAAATCTCCAGAATGACCATCAAGGAATGGTCAACTACATCTACGACACCTTGTGGTCCCGCCGAGACAAGGAGTACATTATGTGCGCCTATAATCAATATGCCCATTGGATCCTTCTGGTCATAACACCTAAGTGGAGTACATGTCACTACCTGAACTCCAGAATTGATAAGAACACATATGATTGGACCCCAATTCAACTAGCGATAGATGAAGCGTGGGCCCAATACATGCAAAGAGGAGGCCTCAGGAAGACAAGACATGACACCCTCATCCACAAAAAAGACTTCCCGGTGAAGCAACAAATAGGTGACCAGTGCGGATTCCATGTGTGCCACAACATGCGCCTTCTATATAGAGAAAAGGTGAAGACTTTGGCTGAGTTTGAGGGCACAATAACCAAGTCTCTGCCTACCAGCTTTGAGGAGGCAATGATGAACACTTATTATGCAACTGTGATGATGTAA

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Protein seq

MSTTTSESSRARTPRTGNKIPKEQFRITAVDAVGLPTSPRKTLSRFRSICGVIGRQKFSILQDDIKLVPAAEKDIAWLTFKESFDYPAELEDRLRRAAFQVMGNAWKNFKTKLVGEFVYNPVNPDPREKFSWITEQVWEEFHVKKSTPESRARSKAYRLLQTRNQHPHQLGTAGYAGKDEEWQREDEEASQSCTPLVFGDIPHSRARNWARARYQKNDDGTIFMSNVEDQRVYEAIKELVAEQQASQEAYSQRREDDLLTKALGNKEHRGRTRGVGSSVPWKYGFPENAWQYKKWTSNKAEKDARLEAKIRASIKAELTSEFDEKLESMRAKIRQEIREEQQNPQAAAAAHEELGSPTQKRSSCASTELAENPTSVDSAVDHIMELTSCTLTVRVMPTFTVPAAEGLAYKPTPETRVHGAQLRADCAKVQVDSVKPEYELFPLKYPSNDEVLSLGNARGTFIQWPKDLIEIKVTARPTTAPGGRPPKRPASAPSAPPAQDHHAQSYDVQLQYDTDFGEDRTEADSKAIHEPPPMKKSRKVHSSPQRITLDKPEAKGRGRGGKVQASLLALRKLDLGKGQEETKGKEVKKKYVAPQEFQLGMPLVGDDVLAAMGTACKDLHYYMEKFNARKPSKATDILGEHDGKPFLGSTNYIVVDFKDLFDLYRLRAVDTSLLKCYSLLSWQWCQKHAPEVAFLDPQVVTVTNLQNDHQGMVNYIYDTLWSRRDKEYIMCAYNQYAHWILLVITPKWSTCHYLNSRIDKNTYDWTPIQLAIDEAWAQYMQRGGLRKTRHDTLIHKKDFPVKQQIGDQCGFHVCHNMRLLYREKVKTLAEFEGTITKSLPTSFEEAMMNTYYATVMM

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.0 0.0 0.0

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) NA NA NA NA NA
Nipponbare | IRGSP 1.0 | MSU LOC_Os11g20570 RBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | RAP-db Os07g0422280 SBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) NA NA NA NA NA
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) NA NA NA NA NA
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_06g0015210 SBH 0.000000 0.0 0.0
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) NA NA NA NA NA
PR 106 | Os127742RS1 | Gramene(+IsoSeq) NA NA NA NA NA
Minghui 63 | MH63RS3 | HZAU OsMH63_06G0224500 RBH 0.000226 0 0
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) NA NA NA NA NA
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_06G0216900 RBH 0 0 0
LIMA | Os127564RS1 | Gramene(+IsoSeq) NA NA NA NA NA
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) NA NA NA NA NA
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) NA NA NA NA NA
LIU XU | Os125827RS1 | Gramene(+IsoSeq) NA NA NA NA NA
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) NA NA NA NA NA
N22 | OsN22RS2 | Gramene(+IsoSeq) NA NA NA NA NA
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) NA NA NA NA NA
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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