Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os06g13320 | OGI:06020310 | 5/16 | Nipponbare | IRGSP 1.0 | MSU | Chr06:7325614-7327449 | ||||||||
| Gene Symbol | MAK5 | ||||||||||
| DNA seq | CATACAATAGTTGCTTACTATACTATTAATACCCAGTCCTACCTGTCATACACACATTACGTCTTAGAGTTCGTGCTGCAGCTGGCTACAGATCTGTAACCCACTGCTCTTCTCACTCTTCCTTTATCTATTTAAAATATGTTTATAGCTGAATTATAGCCTGCTATTGTACCTGCTCTTAACAATGTAATGATCCAATTGGAATGATCACCTCTGCAGACTGACGAGACCCTGATCTCAATGAGTTATCACTTTCAGCTGAATCTGTAGTGCTTGTCCACCTAAGCGCAGCCGCCGGCGACGCGACCAAATGCTGGAACGGGTTCACCGGCGGCGCGTCGATGTCCACCTCCCCTTCCAGCATCCTCACCACGGCGCTCATCGGCGGCCTCGCCTCCGGCTGCTGCTGCACGCACCAGAACGCCACCTTGCACATCCTCTCCACCGTCTCCCTCTCCTGCTTGTCCATGGCGTCGCAGCCCTCGATGGCCTCGGCGAGGTGTCCGGCCTCGTGCTTGCTCCACGCCAGCATCGGGAACCACTGCTGCTGGCTCCCCGGCGCGCCGCCGTCGTCGAGGTTCCGCCGCCGGCGGACAATCTCGAACAGGAGCACGCCGAAGCTGTACACGTCGCACTTCTCGGTCACGCCCGCCTGCATCCACATCTCCGGCGCGGCGTAGCCCGGGGTGCCGCGCATGCCGGACACCGAGACGTGCGTGTCGCCGCGGCTCGCCAGCCGCGCCAGCCCGAAGTCGGCCACCTTGGGCGTCAGGCCGCCGTCGAGCAGGACGTTGCCGGGCTTGATGTCGTAGTGCACGATCTTGTGCTGGCACTCCTCGTGGAGGTAGCGGAGCCCCCTCGCGACACCGACGGCGATGGCGCGCCGCGTCGCGACGGCGACGGCGCGGCTCCGGTCGAACAGGTAGGCGTCGAGCGCCCCGTTGTCCATGTACTCGTACACCAGCGCGCGCACGTCGGCGTCGAAGCAGAAGCCGAACAGCCTGACGAGGTTGATGTGGTGAATCCTCCCGACGCTGCCCACCTCCGCCATGAACTGCTCCTGCGACGTCGACCACCCGTCGCCATGGCCGCCGACGTGGAGGCGCTTCACGGCGACCGTGAGGCCGTTCGGGAGCATGCCCTTGTACACGGTGCCGAAGCCGCCGGCGCCGAGCCGGGCCGAGTAGTTGTTCGTGAATCCGGCCAGCTGCTGCGCCGTGAACCGGATGGGCTTCTCGCCGGCGATCTCTTTGAGAAACCTCTCGACGGTGGCGTCGCGTATCTGGGAGTCGGGCACCACGGCGTACATCGCCGCCGCCGCCGTCGGGTTGGTGTTGATGTTGACGGCCGGGAGGCCATTCTTCTTGACACATCTGTACACGAGGTAAACAATGGCGACTGATCCAGCAATGCTCACCACTGAAAGCACTGCATCACCAGAGATCAAAACCAAGCATCATCTCAGTGAAACCAGCTCATCATCTCGAAACAAGAAACTGAAAATTGAAAAGAACAAAAGAAAGAAAAAACATGTACAAATTGCCGAGATTTCACGCACCGACGACGATGGCTAGGAAGGAGTTGAAATTGCTGGAGGCTTGCTTGTTGAAATCGTCGAACGACTGGTTGGGATTAGCAGACATGTTGGTGGATGAATAATGAATTACTGCTGCAAATGAAGAACGAATTGGGAGGATTCTGAACTTCTTGGTGATCCAAACTCTGAAGCTGATCGATCAAGCTTGCATGCAAACTAACAATGCGTGTAGCATATGCAGCTGTAATCTGGGGCTGAATTTATAGCACTCAAGGGGCTATCGTGTTGGGACAGCAACC
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| CDS seq | ATGTCTGCTAATCCCAACCAGTCGTTCGACGATTTCAACAAGCAAGCCTCCAGCAATTTCAACTCCTTCCTAGCCATCGTCGTCGTGCTTTCAGTGGTGAGCATTGCTGGATCAGTCGCCATTGTTTACCTCGTGTACAGATGTGTCAAGAAGAATGGCCTCCCGGCCGTCAACATCAACACCAACCCGACGGCGGCGGCGGCGATGTACGCCGTGGTGCCCGACTCCCAGATACGCGACGCCACCGTCGAGAGGTTTCTCAAAGAGATCGCCGGCGAGAAGCCCATCCGGTTCACGGCGCAGCAGCTGGCCGGATTCACGAACAACTACTCGGCCCGGCTCGGCGCCGGCGGCTTCGGCACCGTGTACAAGGGCATGCTCCCGAACGGCCTCACGGTCGCCGTGAAGCGCCTCCACGTCGGCGGCCATGGCGACGGGTGGTCGACGTCGCAGGAGCAGTTCATGGCGGAGGTGGGCAGCGTCGGGAGGATTCACCACATCAACCTCGTCAGGCTGTTCGGCTTCTGCTTCGACGCCGACGTGCGCGCGCTGGTGTACGAGTACATGGACAACGGGGCGCTCGACGCCTACCTGTTCGACCGGAGCCGCGCCGTCGCCGTCGCGACGCGGCGCGCCATCGCCGTCGGTGTCGCGAGGGGGCTCCGCTACCTCCACGAGGAGTGCCAGCACAAGATCGTGCACTACGACATCAAGCCCGGCAACGTCCTGCTCGACGGCGGCCTGACGCCCAAGGTGGCCGACTTCGGGCTGGCGCGGCTGGCGAGCCGCGGCGACACGCACGTCTCGGTGTCCGGCATGCGCGGCACCCCGGGCTACGCCGCGCCGGAGATGTGGATGCAGGCGGGCGTGACCGAGAAGTGCGACGTGTACAGCTTCGGCGTGCTCCTGTTCGAGATTGTCCGCCGGCGGCGGAACCTCGACGACGGCGGCGCGCCGGGGAGCCAGCAGCAGTGGTTCCCGATGCTGGCGTGGAGCAAGCACGAGGCCGGACACCTCGCCGAGGCCATCGAGGGCTGCGACGCCATGGACAAGCAGGAGAGGGAGACGGTGGAGAGGATGTGCAAGGTGGCGTTCTGGTGCGTGCAGCAGCAGCCGGAGGCGAGGCCGCCGATGAGCGCCGTGGTGAGGATGCTGGAAGGGGAGGTGGACATCGACGCGCCGCCGGTGAACCCGTTCCAGCATTTGGTCGCGTCGCCGGCGGCTGCGCTTAGGTGGACAAGCACTACAGATTCAGCTGAAAGTGATAACTCATTGAGATCAGGGTCTCGTCAGTCTGCAGAGGTGATCATTCCAATTGGATCATTACATTGTTAA
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| Protein seq | MSANPNQSFDDFNKQASSNFNSFLAIVVVLSVVSIAGSVAIVYLVYRCVKKNGLPAVNINTNPTAAAAMYAVVPDSQIRDATVERFLKEIAGEKPIRFTAQQLAGFTNNYSARLGAGGFGTVYKGMLPNGLTVAVKRLHVGGHGDGWSTSQEQFMAEVGSVGRIHHINLVRLFGFCFDADVRALVYEYMDNGALDAYLFDRSRAVAVATRRAIAVGVARGLRYLHEECQHKIVHYDIKPGNVLLDGGLTPKVADFGLARLASRGDTHVSVSGMRGTPGYAAPEMWMQAGVTEKCDVYSFGVLLFEIVRRRRNLDDGGAPGSQQQWFPMLAWSKHEAGHLAEAIEGCDAMDKQERETVERMCKVAFWCVQQQPEARPPMSAVVRMLEGEVDIDAPPVNPFQHLVASPAAALRWTSTTDSAESDNSLRSGSRQSAEVIIPIGSLHC |
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| Function | G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 [UniProtKB/Swiss-Prot:Q8RWZ5] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os06g13320 | LOC_Os06g13320.1 | Chr06 | 7325614 | 7327449 | - | MSU_osa1r7 | ||
| CDS seq | ATGTCTGCTAATCCCAACCAGTCGTTCGACGATTTCAACAAGCAAGCCTCCAGCAATTTCAACTCCTTCCTAGCCATCGTCGTCGTGCTTTCAGTGGTGAGCATTGCTGGATCAGTCGCCATTGTTTACCTCGTGTACAGATGTGTCAAGAAGAATGGCCTCCCGGCCGTCAACATCAACACCAACCCGACGGCGGCGGCGGCGATGTACGCCGTGGTGCCCGACTCCCAGATACGCGACGCCACCGTCGAGAGGTTTCTCAAAGAGATCGCCGGCGAGAAGCCCATCCGGTTCACGGCGCAGCAGCTGGCCGGATTCACGAACAACTACTCGGCCCGGCTCGGCGCCGGCGGCTTCGGCACCGTGTACAAGGGCATGCTCCCGAACGGCCTCACGGTCGCCGTGAAGCGCCTCCACGTCGGCGGCCATGGCGACGGGTGGTCGACGTCGCAGGAGCAGTTCATGGCGGAGGTGGGCAGCGTCGGGAGGATTCACCACATCAACCTCGTCAGGCTGTTCGGCTTCTGCTTCGACGCCGACGTGCGCGCGCTGGTGTACGAGTACATGGACAACGGGGCGCTCGACGCCTACCTGTTCGACCGGAGCCGCGCCGTCGCCGTCGCGACGCGGCGCGCCATCGCCGTCGGTGTCGCGAGGGGGCTCCGCTACCTCCACGAGGAGTGCCAGCACAAGATCGTGCACTACGACATCAAGCCCGGCAACGTCCTGCTCGACGGCGGCCTGACGCCCAAGGTGGCCGACTTCGGGCTGGCGCGGCTGGCGAGCCGCGGCGACACGCACGTCTCGGTGTCCGGCATGCGCGGCACCCCGGGCTACGCCGCGCCGGAGATGTGGATGCAGGCGGGCGTGACCGAGAAGTGCGACGTGTACAGCTTCGGCGTGCTCCTGTTCGAGATTGTCCGCCGGCGGCGGAACCTCGACGACGGCGGCGCGCCGGGGAGCCAGCAGCAGTGGTTCCCGATGCTGGCGTGGAGCAAGCACGAGGCCGGACACCTCGCCGAGGCCATCGAGGGCTGCGACGCCATGGACAAGCAGGAGAGGGAGACGGTGGAGAGGATGTGCAAGGTGGCGTTCTGGTGCGTGCAGCAGCAGCCGGAGGCGAGGCCGCCGATGAGCGCCGTGGTGAGGATGCTGGAAGGGGAGGTGGACATCGACGCGCCGCCGGTGAACCCGTTCCAGCATTTGGTCGCGTCGCCGGCGGCTGCGCTTAGGTGGACAAGCACTACAGATTCAGCTGAAAGTGATAACTCATTGAGATCAGGGTCTCGTCAGTCTGCAGAGGTGATCATTCCAATTGGATCATTACATTGTTAA
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| Protein seq | MSANPNQSFDDFNKQASSNFNSFLAIVVVLSVVSIAGSVAIVYLVYRCVKKNGLPAVNINTNPTAAAAMYAVVPDSQIRDATVERFLKEIAGEKPIRFTAQQLAGFTNNYSARLGAGGFGTVYKGMLPNGLTVAVKRLHVGGHGDGWSTSQEQFMAEVGSVGRIHHINLVRLFGFCFDADVRALVYEYMDNGALDAYLFDRSRAVAVATRRAIAVGVARGLRYLHEECQHKIVHYDIKPGNVLLDGGLTPKVADFGLARLASRGDTHVSVSGMRGTPGYAAPEMWMQAGVTEKCDVYSFGVLLFEIVRRRRNLDDGGAPGSQQQWFPMLAWSKHEAGHLAEAIEGCDAMDKQERETVERMCKVAFWCVQQQPEARPPMSAVVRMLEGEVDIDAPPVNPFQHLVASPAAALRWTSTTDSAESDNSLRSGSRQSAEVIIPIGSLHC
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.149020 | 0.246611 | 0.180078 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_06g0241100 | RBH | 0.219353 | 0.367092 | 0.700372 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os07g04820 | RBH | 0.000000 | 0.156622 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os06g0241100 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_06g0009480 | RBH | 0.0 | 0.000000 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_06g0009370 | RBH | 0.0 | 0.0 | 0.734276 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_06g0009370 | RBH | 0.0 | 0.0 | 1.083402 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_06g0003030 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_06g0002980 | SBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_06G0056600 | SBH | 0.227399 | 1.6215855 | 0.277127 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_06g0002950 | SBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_06G0037500 | SBH | 0.416013 | 8.1286765 | 0.020091 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_06g0003080 | SBH | 0.0 | 0.069793 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_06g0009340 | RBH | 0.118596 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_06g0002970 | SBH | 0.0 | 3.614781 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_06g0003000 | SBH | 0.0 | 0.063592 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_06g0002870 | SBH | 0.066441 | 3.844864 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_06G002890 | SBH | 0.0 | 0.510873 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_06g0003080 | SBH | 0.0 | 5.758836 | 0.0 |
