Rice Gene Index (RGI): a comprehensive pan-genome database for comparative and functional genomics of Asian rice.

Basic Info

Gene ID		OGI # \| Score			Accession \| Assembly \| Annotation			Location		Links
LOC_Os06g12360		OGI:06018440 \| 16/16			Nipponbare \| IRGSP 1.0 \| MSU			Chr06:6696666-6700782		Homologues MicroCollinearity RGI-JBrowse RGAP Ricevarmap2
Gene Symbol		-
DNA seq		ATGCGGCACAACCGCTCCCTCGCGGCGCTCCTCCGCGCCGGCCGCTACGGCGCCGCGCGGCGCCTCTTCGACGCCCTCCCGGCCCGCTCCGTCGTGACGTGGAACTCGCTCCTGGCGGGGCTCGCCCGCCGCCCCGACGCCCGCGCGGCGCGGGAGTTCTTCGACGCCATGCCCGTCCGCGACGCCGTCTCGTGGAACACGCTGCTCGCCGCCTACTCCGCCTCCCCGCACCCGGACCACCTCGCGGCCGCGCGGCGGCTGTTCGACGAAATGCCCCAGCGGGACGTCGTCACGTGGAACACGCTGCTGGGCGCCTACGCGCGCCGGGGGCTCATGGACGAGGCGCGGAGGCTGTTCGACGAGATGCCCCAGAGGAACGCCGCTTCCTGGAACACGATGGTCACCGGGTTCTTTGCTGCTGGCCAGGTGGTGAAGGCCCTTGACGTGTTCGATGCAATGCCTGCCAAGGATTCTGCATCTCTGAGCACGATGGTGTCTGGGTTTACCAAGAATGGTATGCTGCATGAGGCCGAGGAGTTGTTAACAAAGCGTTTGAGTGTGACAGACATGGACAAAGCTGTTGACGCTTACAATACACTAATTGTTGCATATGGACAAGCTGGGAGGTTTAGTGATGCCAAAAGATTATTTGATATGATACCCAAAGGACAATACCAGCATAATATGCTCAAAAGGAAAGGTTTTGAGAGGAATGTTGTTTCATGGAACTCGATGATGATATGCTATATCAAGGCTGGTGATGTTTGCTCAGCTAGGGCATTGTTTAATGAGATGCCAGATAAAGACTTGGTTTCATGGAATACTATGATTTCTGGGTATACTCAAGCGTCAGATATGAAAGAATCAGAGAAACTGTTCTGGGAAATGCCAGATCCAGATACAGTATCATGGAATTTAATTATACAAGGATTCATGCAAAAAGGAGAGGCTGAGCATGCCAGGGGATTTTTTGATAGGATGCCAGAGCGTGGAACCATCTCATGGAATACAATGATATCCGGTTATGAGAAAAATGGGAATTACATCAGTTCTGTTAAGTTGTTTTCAAAGATGCTTGAAGTTGGTGAGATTCCTGATCGGCATACCTTCTCTTCTGTTCTAGCAGCATGTGCCTCTATCCCTATGTTAGGCCTCGGAGCTCAGATCCACCAACTTGTTGAAAAATCATTTGTGCCAGATACTGCAATCAGCAATGCACTTATAACGATGTACTCTAGATGTGGGGCACTAAATGATGCGGAGGCCATCTTCAAGCAGATGCATACAAAAAAGGATTTAGTGTCTTGGAATGCACTAATAGGATGTTATGAACACCATGGTCGTGCTACAAAAGCCTTGCAACTGTTCAAAGAGATGAGGAGAGCCAAGGTTATGCCTACTCACATAACCTTTGTTTCTCTCTTGAGTGCGTGCGTCAATGCTGGTCTTGTCTCTGAAGGACGGATGGTGTTCGATACCATGGTTCATGAGTATGGCATTGTTGCTAGAATTGAGCACTATGCTGCACTCGTCAATCTCATAGGACGTCATGGGCAACTTGATGACGCGTTGGAGGTGATCAATAGCATGCCAATGGCTCCAGATCGATCAGTTTGGGGTGCATTTCTTGGAGCTTGTACGGCTAAGAAGAATGAACCACTAGCTCAAATGGCTGCAAAGGAACTATCGACGATTAATCCCGACAGTTCTGCTCCATACGTACTTATTCATAACCTACATGCCCATGAAGGGAAGTGGGGAAGTGCAGCGGTGGTAAGGGAAGAGATGGAACGGCAAGGCATTTACAAGCAGCCAGGATACAGCTGGATTGATTTGGAAGGCAAGATGCATGTCTTCATCTCAGGGGATACTTGGCATCCCAATGCCCAGGAGATTTTTTCTGTCCTGGAAGGTGTTGACAGGACATGTAGAGATTGGAGTTAGACGGTACGGCAAATTTTTTGTTTCTATATATAACAGAAAAAAAGTTTTGTTGTGTTAGACTGTAGAAGCAAATGTACAGCTTTTCTTCCTTCAATTCTTCTTGTACTGTACAGATATCTCATTTCATGTATTGTTTGTATTTTCCTGAGTTCAACAAACGATTTGTCTTCAATCTAATTGCAATAATGAATTTATACAGTGATATATTAAATTTACTTACATAACTGTTCAAATTTTGATAAATTCATTCTTAGACAGCAAAATCATACTAAATGTGAATGATTTATTTTCCACAGTGCGGTCGTTTGCCTAGCTTTCTGCAGATTGGCAATGGCACAACCCAATGAGCTTGGAGATGAACCAGCTAACTCAAGTAAAGCTTATTGCTAAAAGAAACAATCAAGTAAGCTTGTGTTTTACATGTTTGGCACATGTTTGTTACTTTGTTTTCGATACTACTATCTCTTTTTTTGCAGTTAATTGCTGCTTTGTTCACGAAACATAATTGACAAATGCTTGCTCTCCCGTAGGAGAATTGTCCTGGATCCGTCCCTATGAAATTTTTCCCAGTTCTCACTAGTTACAGTTATGGTTACAACAGGCCAGTGGTGCACGTTTATATATGAGCCATATATATATATATTTTTAAGATAATGGATAAGCAGGCCACTGCAACTAAGATGCACAAAGCCACAAATATTAGACATATATACAGCAAATTTAAAGTAGATGAACAGCAAAACACAAGGTTCATGTCCTAAACAAGCCATAATATTAAAATATCAGTTCAGCTAAAGAATATCAGTAGTACTAATCTTAGTGGGAAAACTAATCTAGCCGGAAGATTTTACTCCCCAATGCACAAACCCCAAAGACATGCTCTGCAATTACCAAAACTAATTACTAGTGGGCAGCCAATACCATAATTGCTTTGGTAACCCCCGATCCATTAGCCACTCTTTGCATTAACTCTTTTGCATGGTTTTAATTACTAACCGTTTCCATGCGTCATGCGCCCAATGATATCAGGATTTGTGAGCCGGCTTTCCTTTCATGAGTTCATCCACTCAGTATATATTCTCTGGCTGCTCACCACTCAAATCTCTCTCGAAAGAATGGAGCCCAGCCAAGAACATAGGTAAGCTCAGTTTTGTCTTGCATCATGCATATGGTTAACCATGCTCCTCTCTGAGAAAATTTTGTAGCAGTAGCATTTTTTGGCTGCAAGACAGTGTGTTTATCTGTTATTGATCTAGCCTTTTTTTTTCATGAACTAGCTGGTGGCCTTATTGTACTAGCCTTTGGCCTGATAGTTACCTGCTTGAGGAGGAAGCGCTCTTCTCCAGTCTTTCCTTCCCGAGCTTTCATCCCCAGCCAGTCTACTCTACTGTCATGCAAAGCAACGTTTTACAAGGTATGCCTTTTTTTCTTTCTTCTTGGATTACTGAAAGAATGGTCATCTCTTTTTTAACCGAAGAAGAATGGTAATTTCTGTGTATTTGTGGTGCTTAGACCCTTGTTTCTTGCCATGCAGACGAGCTTGGTGTCATCTTTGAAGATGATGTGCTGAAGTATTGGGATGAGATGGAGCAATCGGAGAACAAGGTAGAGAAAAGTGAGAAGGGATTGCCACTGCTCTATTACGGTGATGAGAACGGAGCAGCCTCCAAGATCATGAGAGACGATGTTAGATCAGAGGAGAAGGCATTGACGTTCGAGCTCGTGTCCCAGTACTTCTACATGCCGATCACGCAGGCGGCACGAGAGCTGAATGTTGGGCTCACCCTCCTGAAGAAGAAGTGCAGAGAGCTGGGCATTCCAAGGTGGCCACACCGCAAGATGAAAAGCTTGCAGACACTCATCAACAATGTACAGGTCCTCTCTTTCTTCCCAACTTTCGTTTTTGTAATTCTATGTCAGATAAAACTTTATACTCTGTTTTATTAATACATTTGTGAGATAAATGGCGATGCAGGTCCTTCAGGAAGCCAGCAAGGCGAACAATGAGGAGCAGCTGAGGATGCTGGTAGAGATGCTGCAGGAGGAGAGGAGGCTCCTGGAGCAGAAGCCGTATGTTCAGCTCGAGGAGAAGACGAAGAGGCTCAGGCAGGCCTGCTTCAAGGCCAACTACAAGAAGAGGCGCCTCTTGGCTCTTGAAGCTGGGGAGCCGTGA More
CDS seq		ATGCGGCACAACCGCTCCCTCGCGGCGCTCCTCCGCGCCGGCCGCTACGGCGCCGCGCGGCGCCTCTTCGACGCCCTCCCGGCCCGCTCCGTCGTGACGTGGAACTCGCTCCTGGCGGGGCTCGCCCGCCGCCCCGACGCCCGCGCGGCGCGGGAGTTCTTCGACGCCATGCCCGTCCGCGACGCCGTCTCGTGGAACACGCTGCTCGCCGCCTACTCCGCCTCCCCGCACCCGGACCACCTCGCGGCCGCGCGGCGGCTGTTCGACGAAATGCCCCAGCGGGACGTCGTCACGTGGAACACGCTGCTGGGCGCCTACGCGCGCCGGGGGCTCATGGACGAGGCGCGGAGGCTGTTCGACGAGATGCCCCAGAGGAACGCCGCTTCCTGGAACACGATGGTCACCGGGTTCTTTGCTGCTGGCCAGGTGGTGAAGGCCCTTGACGTGTTCGATGCAATGCCTGCCAAGGATTCTGCATCTCTGAGCACGATGGTGTCTGGGTTTACCAAGAATGGTATGCTGCATGAGGCCGAGGAGTTGTTAACAAAGCGTTTGAGTGTGACAGACATGGACAAAGCTGTTGACGCTTACAATACACTAATTGTTGCATATGGACAAGCTGGGAGGTTTAGTGATGCCAAAAGATTATTTGATATGATACCCAAAGGACAATACCAGCATAATATGCTCAAAAGGAAAGGTTTTGAGAGGAATGTTGTTTCATGGAACTCGATGATGATATGCTATATCAAGGCTGGTGATGTTTGCTCAGCTAGGGCATTGTTTAATGAGATGCCAGATAAAGACTTGGTTTCATGGAATACTATGATTTCTGGGTATACTCAAGCGTCAGATATGAAAGAATCAGAGAAACTGTTCTGGGAAATGCCAGATCCAGATACAGTATCATGGAATTTAATTATACAAGGATTCATGCAAAAAGGAGAGGCTGAGCATGCCAGGGGATTTTTTGATAGGATGCCAGAGCGTGGAACCATCTCATGGAATACAATGATATCCGGTTATGAGAAAAATGGGAATTACATCAGTTCTGTTAAGTTGTTTTCAAAGATGCTTGAAGTTGGTGAGATTCCTGATCGGCATACCTTCTCTTCTGTTCTAGCAGCATGTGCCTCTATCCCTATGTTAGGCCTCGGAGCTCAGATCCACCAACTTGTTGAAAAATCATTTGTGCCAGATACTGCAATCAGCAATGCACTTATAACGATGTACTCTAGATGTGGGGCACTAAATGATGCGGAGGCCATCTTCAAGCAGATGCATACAAAAAAGGATTTAGTGTCTTGGAATGCACTAATAGGATGTTATGAACACCATGGTCGTGCTACAAAAGCCTTGCAACTGTTCAAAGAGATGAGGAGAGCCAAGGTTATGCCTACTCACATAACCTTTGTTTCTCTCTTGAGTGCGTGCGTCAATGCTGGTCTTGTCTCTGAAGGACGGATGGTGTTCGATACCATGGTTCATGAGTATGGCATTGTTGCTAGAATTGAGCACTATGCTGCACTCGTCAATCTCATAGGACGTCATGGGCAACTTGATGACGCGTTGGAGGTGATCAATAGCATGCCAATGGCTCCAGATCGATCAGTTTGGGGTGCATTTCTTGGAGCTTGTACGGCTAAGAAGAATGAACCACTAGCTCAAATGGCTGCAAAGGAACTATCGACGATTAATCCCGACAGTTCTGCTCCATACGTACTTATTCATAACCTACATGCCCATGAAGGGAAGTGGGGAAGTGCAGCGGTGGTAAGGGAAGAGATGGAACGGCAAGGCATTTACAAGCAGCCAGGATACAGCTGGATTGATTTGGAAGGCAAGATGCATGTCTTCATCTCAGGGGATACTTGGCATCCCAATGCCCAGGAGATTTTTTCTGTCCTGGAAGATTGGCAATGGCACAACCCAATGAGCTTGGAGATGAACCAGCTAACTCAAGTAAAGCTTATTGCTAAAAGAAACAATCAAATAATGGATAAGCAGGCCACTGCAACTAAGATGCACAAAGCCACAAATATTAGACATATATACAGCAAATTTAAAGTAGATGAACAGCAAAACACAAGCTGGTGGCCTTATTGTACTAGCCTTTGGCCTGATAGTTACCTGCTTGAGGAGGAAGCGCTCTTCTCCAGTCTTTCCTTCCCGAGCTTTCATCCCCAGCCAGTCTACTCTACTGTCATGCAAAGCAACGTTTTACAAGACGAGCTTGGTGTCATCTTTGAAGATGATGTGCTGAAGTATTGGGATGAGATGGAGCAATCGGAGAACAAGGTAGAGAAAAGTGAGAAGGGATTGCCACTGCTCTATTACGGTGATGAGAACGGAGCAGCCTCCAAGATCATGAGAGACGATGTTAGATCAGAGGAGAAGGCATTGACGTTCGAGCTCGTGTCCCAGTACTTCTACATGCCGATCACGCAGGCGGCACGAGAGCTGAATGTTGGGCTCACCCTCCTGAAGAAGAAGTGCAGAGAGCTGGGCATTCCAAGGTGGCCACACCGCAAGATGAAAAGCTTGCAGACACTCATCAACAATGTACAGGTCCTTCAGGAAGCCAGCAAGGCGAACAATGAGGAGCAGCTGAGGATGCTGGTAGAGATGCTGCAGGAGGAGAGGAGGCTCCTGGAGCAGAAGCCGTATGTTCAGCTCGAGGAGAAGACGAAGAGGCTCAGGCAGGCCTGCTTCAAGGCCAACTACAAGAAGAGGCGCCTCTTGGCTCTTGAAGCTGGGGAGCCGTGA More
Protein seq		MRHNRSLAALLRAGRYGAARRLFDALPARSVVTWNSLLAGLARRPDARAAREFFDAMPVRDAVSWNTLLAAYSASPHPDHLAAARRLFDEMPQRDVVTWNTLLGAYARRGLMDEARRLFDEMPQRNAASWNTMVTGFFAAGQVVKALDVFDAMPAKDSASLSTMVSGFTKNGMLHEAEELLTKRLSVTDMDKAVDAYNTLIVAYGQAGRFSDAKRLFDMIPKGQYQHNMLKRKGFERNVVSWNSMMICYIKAGDVCSARALFNEMPDKDLVSWNTMISGYTQASDMKESEKLFWEMPDPDTVSWNLIIQGFMQKGEAEHARGFFDRMPERGTISWNTMISGYEKNGNYISSVKLFSKMLEVGEIPDRHTFSSVLAACASIPMLGLGAQIHQLVEKSFVPDTAISNALITMYSRCGALNDAEAIFKQMHTKKDLVSWNALIGCYEHHGRATKALQLFKEMRRAKVMPTHITFVSLLSACVNAGLVSEGRMVFDTMVHEYGIVARIEHYAALVNLIGRHGQLDDALEVINSMPMAPDRSVWGAFLGACTAKKNEPLAQMAAKELSTINPDSSAPYVLIHNLHAHEGKWGSAAVVREEMERQGIYKQPGYSWIDLEGKMHVFISGDTWHPNAQEIFSVLEDWQWHNPMSLEMNQLTQVKLIAKRNNQIMDKQATATKMHKATNIRHIYSKFKVDEQQNTSWWPYCTSLWPDSYLLEEEALFSSLSFPSFHPQPVYSTVMQSNVLQDELGVIFEDDVLKYWDEMEQSENKVEKSEKGLPLLYYGDENGAASKIMRDDVRSEEKALTFELVSQYFYMPITQAARELNVGLTLLKKKCRELGIPRWPHRKMKSLQTLINNVQVLQEASKANNEEQLRMLVEMLQEERRLLEQKPYVQLEEKTKRLRQACFKANYKKRRLLALEAGEP
Function		Pentatricopeptide repeat-containing protein At1g62260, mitochondrial [UniProtKB/Swiss-Prot:O04590]

Transcripts

Gene	Transcript	Chromosome	Start	End	Strand	Source
LOC_Os06g12360	LOC_Os06g12360.1	Chr06	6696666	6700782	+	MSU_osa1r7
CDS seq	ATGCGGCACAACCGCTCCCTCGCGGCGCTCCTCCGCGCCGGCCGCTACGGCGCCGCGCGGCGCCTCTTCGACGCCCTCCCGGCCCGCTCCGTCGTGACGTGGAACTCGCTCCTGGCGGGGCTCGCCCGCCGCCCCGACGCCCGCGCGGCGCGGGAGTTCTTCGACGCCATGCCCGTCCGCGACGCCGTCTCGTGGAACACGCTGCTCGCCGCCTACTCCGCCTCCCCGCACCCGGACCACCTCGCGGCCGCGCGGCGGCTGTTCGACGAAATGCCCCAGCGGGACGTCGTCACGTGGAACACGCTGCTGGGCGCCTACGCGCGCCGGGGGCTCATGGACGAGGCGCGGAGGCTGTTCGACGAGATGCCCCAGAGGAACGCCGCTTCCTGGAACACGATGGTCACCGGGTTCTTTGCTGCTGGCCAGGTGGTGAAGGCCCTTGACGTGTTCGATGCAATGCCTGCCAAGGATTCTGCATCTCTGAGCACGATGGTGTCTGGGTTTACCAAGAATGGTATGCTGCATGAGGCCGAGGAGTTGTTAACAAAGCGTTTGAGTGTGACAGACATGGACAAAGCTGTTGACGCTTACAATACACTAATTGTTGCATATGGACAAGCTGGGAGGTTTAGTGATGCCAAAAGATTATTTGATATGATACCCAAAGGACAATACCAGCATAATATGCTCAAAAGGAAAGGTTTTGAGAGGAATGTTGTTTCATGGAACTCGATGATGATATGCTATATCAAGGCTGGTGATGTTTGCTCAGCTAGGGCATTGTTTAATGAGATGCCAGATAAAGACTTGGTTTCATGGAATACTATGATTTCTGGGTATACTCAAGCGTCAGATATGAAAGAATCAGAGAAACTGTTCTGGGAAATGCCAGATCCAGATACAGTATCATGGAATTTAATTATACAAGGATTCATGCAAAAAGGAGAGGCTGAGCATGCCAGGGGATTTTTTGATAGGATGCCAGAGCGTGGAACCATCTCATGGAATACAATGATATCCGGTTATGAGAAAAATGGGAATTACATCAGTTCTGTTAAGTTGTTTTCAAAGATGCTTGAAGTTGGTGAGATTCCTGATCGGCATACCTTCTCTTCTGTTCTAGCAGCATGTGCCTCTATCCCTATGTTAGGCCTCGGAGCTCAGATCCACCAACTTGTTGAAAAATCATTTGTGCCAGATACTGCAATCAGCAATGCACTTATAACGATGTACTCTAGATGTGGGGCACTAAATGATGCGGAGGCCATCTTCAAGCAGATGCATACAAAAAAGGATTTAGTGTCTTGGAATGCACTAATAGGATGTTATGAACACCATGGTCGTGCTACAAAAGCCTTGCAACTGTTCAAAGAGATGAGGAGAGCCAAGGTTATGCCTACTCACATAACCTTTGTTTCTCTCTTGAGTGCGTGCGTCAATGCTGGTCTTGTCTCTGAAGGACGGATGGTGTTCGATACCATGGTTCATGAGTATGGCATTGTTGCTAGAATTGAGCACTATGCTGCACTCGTCAATCTCATAGGACGTCATGGGCAACTTGATGACGCGTTGGAGGTGATCAATAGCATGCCAATGGCTCCAGATCGATCAGTTTGGGGTGCATTTCTTGGAGCTTGTACGGCTAAGAAGAATGAACCACTAGCTCAAATGGCTGCAAAGGAACTATCGACGATTAATCCCGACAGTTCTGCTCCATACGTACTTATTCATAACCTACATGCCCATGAAGGGAAGTGGGGAAGTGCAGCGGTGGTAAGGGAAGAGATGGAACGGCAAGGCATTTACAAGCAGCCAGGATACAGCTGGATTGATTTGGAAGGCAAGATGCATGTCTTCATCTCAGGGGATACTTGGCATCCCAATGCCCAGGAGATTTTTTCTGTCCTGGAAGATTGGCAATGGCACAACCCAATGAGCTTGGAGATGAACCAGCTAACTCAAGTAAAGCTTATTGCTAAAAGAAACAATCAAATAATGGATAAGCAGGCCACTGCAACTAAGATGCACAAAGCCACAAATATTAGACATATATACAGCAAATTTAAAGTAGATGAACAGCAAAACACAAGCTGGTGGCCTTATTGTACTAGCCTTTGGCCTGATAGTTACCTGCTTGAGGAGGAAGCGCTCTTCTCCAGTCTTTCCTTCCCGAGCTTTCATCCCCAGCCAGTCTACTCTACTGTCATGCAAAGCAACGTTTTACAAGACGAGCTTGGTGTCATCTTTGAAGATGATGTGCTGAAGTATTGGGATGAGATGGAGCAATCGGAGAACAAGGTAGAGAAAAGTGAGAAGGGATTGCCACTGCTCTATTACGGTGATGAGAACGGAGCAGCCTCCAAGATCATGAGAGACGATGTTAGATCAGAGGAGAAGGCATTGACGTTCGAGCTCGTGTCCCAGTACTTCTACATGCCGATCACGCAGGCGGCACGAGAGCTGAATGTTGGGCTCACCCTCCTGAAGAAGAAGTGCAGAGAGCTGGGCATTCCAAGGTGGCCACACCGCAAGATGAAAAGCTTGCAGACACTCATCAACAATGTACAGGTCCTTCAGGAAGCCAGCAAGGCGAACAATGAGGAGCAGCTGAGGATGCTGGTAGAGATGCTGCAGGAGGAGAGGAGGCTCCTGGAGCAGAAGCCGTATGTTCAGCTCGAGGAGAAGACGAAGAGGCTCAGGCAGGCCTGCTTCAAGGCCAACTACAAGAAGAGGCGCCTCTTGGCTCTTGAAGCTGGGGAGCCGTGA More
Protein seq	MRHNRSLAALLRAGRYGAARRLFDALPARSVVTWNSLLAGLARRPDARAAREFFDAMPVRDAVSWNTLLAAYSASPHPDHLAAARRLFDEMPQRDVVTWNTLLGAYARRGLMDEARRLFDEMPQRNAASWNTMVTGFFAAGQVVKALDVFDAMPAKDSASLSTMVSGFTKNGMLHEAEELLTKRLSVTDMDKAVDAYNTLIVAYGQAGRFSDAKRLFDMIPKGQYQHNMLKRKGFERNVVSWNSMMICYIKAGDVCSARALFNEMPDKDLVSWNTMISGYTQASDMKESEKLFWEMPDPDTVSWNLIIQGFMQKGEAEHARGFFDRMPERGTISWNTMISGYEKNGNYISSVKLFSKMLEVGEIPDRHTFSSVLAACASIPMLGLGAQIHQLVEKSFVPDTAISNALITMYSRCGALNDAEAIFKQMHTKKDLVSWNALIGCYEHHGRATKALQLFKEMRRAKVMPTHITFVSLLSACVNAGLVSEGRMVFDTMVHEYGIVARIEHYAALVNLIGRHGQLDDALEVINSMPMAPDRSVWGAFLGACTAKKNEPLAQMAAKELSTINPDSSAPYVLIHNLHAHEGKWGSAAVVREEMERQGIYKQPGYSWIDLEGKMHVFISGDTWHPNAQEIFSVLEDWQWHNPMSLEMNQLTQVKLIAKRNNQIMDKQATATKMHKATNIRHIYSKFKVDEQQNTSWWPYCTSLWPDSYLLEEEALFSSLSFPSFHPQPVYSTVMQSNVLQDELGVIFEDDVLKYWDEMEQSENKVEKSEKGLPLLYYGDENGAASKIMRDDVRSEEKALTFELVSQYFYMPITQAARELNVGLTLLKKKCRELGIPRWPHRKMKSLQTLINNVQVLQEASKANNEEQLRMLVEMLQEERRLLEQKPYVQLEEKTKRLRQACFKANYKKRRLLALEAGEP More

Event Type

Chromosome

Start

End

Strand

Alternative mRNAs

Total mRNAs

Source

Expression

	Leaf	Root	Panicle
FPKM	0.059690	0.182645	0.0

Homologues

Genome & Annotation	Homologs	Type	Expression(FPKM)
Genome & Annotation	Homologs	Type	Leaf	Root	Panicle
Nipponbare \| IRGSP 1.0 \| Gramene(+IsoSeq)	OsNip_06g0228950	RBH	0.000000	0.668940	0.0
Nipponbare \| IRGSP 1.0 \| MSU	LOC_Os02g51090	RBH	0.0	0.0	0.000000
Nipponbare \| IRGSP 1.0 \| RAP-db	Os06g0228950	RBH	None	None	None
Azucena \| AzucenaRS1 \| Gramene(+IsoSeq)	OsAzu_06g0008760	RBH	0.065758	0.0	0.0
KETAN NANGKA \| Os128077RS1 \| Gramene(+IsoSeq)	OsKeNa_06g0008630	RBH	0.044467	0.000000	0.083035
CHAO MEO \| Os132278RS1 \| Gramene(+IsoSeq)	OsCMeo_06g0008630	RBH	0.145775	0.0	0.229178
ARC 10497 \| Os117425RS1 \| Gramene(+IsoSeq)	OsARC_06g0008740	RBH	0.0	0.020125	None
PR 106 \| Os127742RS1 \| Gramene(+IsoSeq)	OsPr106_06g0008740	RBH	0.362351	0.0	0.782802
Minghui 63 \| MH63RS3 \| HZAU	OsMH63_06G0111000	RBH	0.7311395	0.9970995	0.684389
IR 64 \| OsIR64RS1 \| Gramene(+IsoSeq)	OsIR64_06g0008340	RBH	0.0	0.0	0.042883
Zhenshan 97 \| ZS97RS3 \| HZAU	OsZS97_06G0112000	RBH	0.5568495	1.1735035	3.263503
LIMA \| Os127564RS1 \| Gramene(+IsoSeq)	OsLima_06g0008820	RBH	0.0	0.0	None
KHAO YAI GUANG \| Os127518RS1 \| Gramene(+IsoSeq)	OsKYG_06g0008630	RBH	0.0	0.000000	None
GOBOL SAIL \| Os132424RS1 \| Gramene(+IsoSeq)	OsGoSa_06g0008680	RBH	0.738919	2.197023	None
LIU XU \| Os125827RS1 \| Gramene(+IsoSeq)	OsLiXu_06g0008740	RBH	0.063923	0.047748	0.080852
LARHA MUGAD \| Os125619RS1 \| Gramene(+IsoSeq)	OsLaMu_06g0008560	RBH	0.000000	0.0	None
N22 \| OsN22RS2 \| Gramene(+IsoSeq)	OsN22_06G008470	RBH	0.054552	0.0	0.000000
NATEL BORO \| Os127652RS1 \| Gramene(+IsoSeq)	OsNaBo_06g0008760	RBH	0.0	0.0	0.0

Custom TreePlot

Powered by

© 2021- Rice Gene Index @Zhang Lab. All Rights Reserved.

National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

Any comments and suggestions, please contact us.