Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os05g51190 | OGI:05079600 | 15/16 | Nipponbare | IRGSP 1.0 | MSU | Chr05:29359911-29364695 | ||||||||
| Gene Symbol | RLCK191, OsRLCK191 | ||||||||||
| DNA seq | AGCCATAGAACAAGCAATAGCAAACCCAATCTTGTCTATCTTGTTCCCAACACATGAGATTCCAAACAAGCAAAACAATCCCTCCCATAAAACACCCATGGATGGTTTTCCCCCGTTCATGACACAAAACAGGCACTTACAAGCCTAGATAGAGCTCAAGATAATGTAAGCCTACTACTACTGTACCACCACCACCACTACTACTGTACACACACTGCAGGCCTTGAGCAGAGCAGAAAAGAATTGCATCAGTACAGGCTGCACAGAATTGGCTGCATTCTTGTGCAGATGGAGATTCTAGAATCTGTGGGACAAGCTCTGCGTATCTCTATCCCAGGCAATTCTCCTCGCCACATAGGACTGTGGTTTACCATCAACCATGATCTGTGAATCTTGCTGAGCCGGGCTGCTCTGCTGCTCTTGTTGGAGAAGCATTCGCCGGCTCCTGCTCCCAGCTTCACTGCATGGAGCAGAAACGCAACCTGATTCCACCACCATGTCGCCCTCCAGTATGCGTAGAACCTTTTCATACATGCGAGGAGAAACATCATTATTAGTACAGATGTAAATCAAGCTTAGGTGATAGGTACTGAGAAATGTGGAGAAGAATGGTGTGTGGCTAACATGGGACATGCGAGGCCTCGAATGAGGGTCACGCCGTATGCACAGGTTTGCTGCATGCAGCATGCACAGGACCTCATTTTCACTGAACCGGTCCCCTAGCCGTGGGTCGATCAGATCGTCGATCGCGTACTCTTCCAGTAAAGGCCGTGCCTGTTGCAAATGGATCAAAACAGGAATGATAATTCAGAGATGCCACTTATCATCAGGAAAAAGTGTGGAACTGTGGATGAGTCAATTCAACAGAGGAAAGTGGAAACTGACAGTCTGGCACTACTGAGGCCATCAGGCTCAAAACATACTTACCATTGTACTATAAGAAAAAGGAGGTTATCAGCGTTTGTCACTTGTCAGAAAAGTAAATATCCAAGCTTAACATAATCTAATGTGATGATATAGCACTAAATAGTGCAATACTAGGTGAACGAACTCACCCATTCAGTGAGGAACTGCTGGCCCTTTGGCCTGTTAATATCAACAGCCTTGCGTCCAGTGACAAGTTCCACTAACACAACCCCAAATGAGTACACATCGGCCTTCTCGGTTATTTGCCCACTCTGCGCATATTCAGGTGCCAGATAACTGCACATGGCCGAAAATGGTCTCAGATATGCCTTTTTCACAAGTTACACCTCACAAAGGACAGGATTGATGGATTGTATGGCTGAGCACTTACCCAAATGTGCCAATTACTCTTGTTTCGACACCCATGTCTCCATCAGGCTGCCATCTAGCCAACCCAAAATCTCCGACCTGCACACGATATGACGATACTTCACCCTCATTATGTGGAAGGAAGTTGAGGCTAAAGACCACTGATGCCAATTAGAATGACAAGTACGGCACATCTTCACAGCATCATGCATGCATATATGATCAATTAATCATGTAGTACTGAATTTTACTATCTATTGAAACAGAACAGCATTTCAATGGAAAGAAGATGACCAGTCTTGTTTATTATGCATCTTCATATCCATCGACTAAGATCCAACATAATATAGGGATGGAATATCATACCAGTGGTTCAAAATCATGTGTGACAAGGATGTTGTTTGGTCTCATATCACGATGGATTATGCAACCAACCCTACATTCTTCATGGAGATATCGCAGCCCTCTCGCAGCTCCTACTGCAATTTTCTGTCTTGCAGCCCATTCCAACGTCTCTTTGTTACGGCCTAAGGAGTAACAGATGGTTTGAAAAGGTAACACTCATGCTTTTTACTCCAACATGGCCATGACATAAGCTAAATCAACAGAGAGTTATTGCAACAGGACCAATGCACTCTTCTCCAATAGCAGGCTACAAGTCAGCTATAAACACATGTGGAGGAGAGAAGAGAAGAGAGAGAAGAAAAACAGGCTACATATTTGTGGTCAGCTGTAGCACGAACTCTAATATTGTGTGTGTATGAGAGGTGGGACCATTTATTAATGGTTTATAGATAACTATTGTATGAATGAGCTATTAGATTGGTTATAGATGATTTGGAGCTAGTAGTTGGCTATATATTAAACTTGCTCTAAGCTATATTCATCAGTCACATAGAATTTGCAGAATAATAATTAGCTTACCATAGAGATGGGAATCCAGCGATCCATTGCAAATGTACTCGTAAACTAGCAAACGCCTCTTGTCTTCGACACAGAAACCAATCAGCATTACAACATTCCGGTGCTGTGCACAGCTTAGAACTTCCACCTCTGAGCAAAACTCAACATCACCTTGGGAGCTAGCAAGTTTGTATTGCTTAACAGCTATTGCCTGGCCATCAGGTAGGACACCTCTGTGAACAGACCCAAACCCACCCTCAGCCAAGAAATTTGCTTGGGAGAAGCCACCAGTTGCAAGTTCCAGTTCCGCGTAGCTGAACCACCGTGGAGGTTTCCCAAATACAGGTGTTTTATGCTGACAAATTGAACACAGAGGCGGTGGTCCAGGAGGTGCACTCCTTGACAATGAAACAACATCTCTCACATTTCCTCTGAAGTTCAAGTCAGACCTGCTTCTGATTGCACTGATTTCAGCCAAGAGATCTAGCTTCGAGATCTTCTCGAGCAAAGCATCTGCGGTAGGAGTACGAGTTCTTCTAGGACGGTTTCCTGCTAATCTTGAGGACGCAGATCCTTTTAAAATGTCAGCCATCCATGGCTGAAGGGATGATGCTGCTGGAGGAGTTGAAGCTTCACTCTCAGAATCAGATACATTGACATCAGAGTGCTGGAAGTTATCCTTGGTTGCCTCTTTCTTGAATGTGCTATTCGTTTCTGAAGCAGAATATGGAGATGTGCCAGGGTCTGAGCTTGAAACGGAGGATGTTCCAACATCAGTGCTACCAAAAGCTGTTTCTGACTCTGGACTGCTACTTGGTGTCACAGCCGGTTCACGAATCGGACATCGCTGTTCGTTGATACTGCTTTCGGTTTCACCAACTGAATCACTCAACTCAGGAAGTGGCGGGAGAGGTGATTTTGATTCTTTTGGGGGAGACCTCACCAGATTCAGACGAAGAACTTTGGGCCGAGAGCGCTTCATAGCAACAATGTTGCATTGAAGTTCTTCCATGCAACGTTTCTCTTCATGTTTCAACTCCCTGAGTAACAAGACCATTGCTCAATGATGCAGATACGGAAGAGGGGTTAAAAGTAACAGTGCACTGTAAAAACTGTGAAATGTAGTACAGGATAACATTACTTGTCTAGCACAACCCAGCTTGCTTGGGCACGCTTTGATTCAGTAGCCACACCACCAGGAGATGCAGGGATAACCTTAAGTTTTGTAATTATCTACACAAAAATGTAACCAGATTTTTTTAGCAAAAAAAAAAAGAGAAAGAGAAAAAGGTGCTTGTGCTGAAAGATTGAAGTAAAAACACACAGCAGCTAGTGTTAGCTCCCTTTTGATACCTTGTTCGGATCATAAAAATCACGAAGTTTCAGCATCATTTGATTACACAAATCAGCGACATCCGAATTCTGAGTCAACACGCTCCTGTGGGCGCTCGCACAACCCCCTGCAAAGAGCGGGAAGCCCCAGAACTTCTTGCCTGAAATTAAAACGAGAGGAAATAATTGAACTAGTGAAAGTTGATCCATGAAGACCAAATCCAAAGAGCTCCATGATACAGTATAAAAATGCATGGCATCGTAAATTGGCAAAGCTGTTGAAGAGGAAGGGCATGTATACCAGAGTTGTGCGGCGGCGGCATGACGGCGAGGAGCAGGATGGTGTCGCCGTGCTGGACGACGTGCGTGAGAGCCCAGACGAGGGCGGCCTTGGAGATGTCCCTGGCGGCGGCCCGCACGGCCACCACAACCACCGCCTCCGCTCCCCGGCCCTTGTCCGGACCGGAGACCACCGCCATGTCCGAGAGCTCGAGCAGCCTCCTAGTGCTTCAAAAGCATTTCGGTTTCAGCAAGAAATGAAGTGAACACCAGCAGAACCAACAGGTGATGAAAAATTGAATTCAAAGACACCAAAATGAGAGAGAGAGAGACAAGCACCGCTAGGCTAGCTCCGGGGACTTTAATGCCCGGAGACGAAGCAGGCAAACAGTAAACACTAGTACTCCACTGTTGTGGTGACTGTGGAGTAGAGAAACCACAGGACAAAAAAGAAAGAAAAGGCCGTCTTTTTTTTTTTTTGCAGGGCTAGTTGAATGGGGTCAGGGAGGGGGTCCGAGCGAGTCGCTGCGGCTGCGGATTGAGAGAAAGATTGCAACTTTTATATGGGTGCTGCGGGCTTGGCGGATAGATGCATGGCGACGCGGGGAAGAAGGGCAAAATGGTGGGCGGCCACCCACTGTGTCTGCTACTGCCATCGTCTCTGTCCGGATTTCGGGGGATTCCTTCCATCTCCATCCATGGCGATTAAGCTTCCTTCCAATCCAAATTGGCGCCGCATTCCGTCGGGAAACACGGGAAGCTTCCCCTCCCCTGTTTATTAGTAGCTGAGTGGAAACATGCAAAACTGAGGAGATAACAAGAGGCCCACCCACCAATCCAAATTAAACACCGTCGTTCAACTGTAAGTACAGGGAACGAACACGGTGCCACCGCCGCAGCTAGCACGCGACGACCACCTCCTCCTCGCCGGAATGCCCCTCACTGGCGTTTCAGCCGGCAGCGATTGTATGCCTCGATTATCGTGGAAGAAGAGAC
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| CDS seq | ATGGCGGTGGTCTCCGGTCCGGACAAGGGCCGGGGAGCGGAGGCGGTGGTTGTGGTGGCCGTGCGGGCCGCCGCCAGGGACATCTCCAAGGCCGCCCTCGTCTGGGCTCTCACGCACGTCGTCCAGCACGGCGACACCATCCTGCTCCTCGCCGTCATGCCGCCGCCGCACAACTCTGGCAAGAAGTTCTGGGGCTTCCCGCTCTTTGCAGGGGGTTGTGCGAGCGCCCACAGGAGCGTGTTGACTCAGAATTCGGATGTCGCTGATTTGTGTAATCAAATGATGCTGAAACTTCGTGATTTTTATGATCCGAACAAGATAATTACAAAACTTAAGGTTATCCCTGCATCTCCTGGTGGTGTGGCTACTGAATCAAAGCGTGCCCAAGCAAGCTGGGTTGTGCTAGACAAGGAGTTGAAACATGAAGAGAAACGTTGCATGGAAGAACTTCAATGCAACATTGTTGCTATGAAGCGCTCTCGGCCCAAAGTTCTTCGTCTGAATCTGGTGAGGTCTCCCCCAAAAGAATCAAAATCACCTCTCCCGCCACTTCCTGAGTTGAGTGATTCAGTTGGTGAAACCGAAAGCAGTATCAACGAACAGCGATGTCCGATTCGTGAACCGGCTGTGACACCAAGTAGCAGTCCAGAGTCAGAAACAGCTTTTGGTAGCACTGATGTTGGAACATCCTCCGTTTCAAGCTCAGACCCTGGCACATCTCCATATTCTGCTTCAGAAACGAATAGCACATTCAAGAAAGAGGCAACCAAGGATAACTTCCAGCACTCTGATGTCAATGTATCTGATTCTGAGAGTGAAGCTTCAACTCCTCCAGCAGCATCATCCCTTCAGCCATGGATGGCTGACATTTTAAAAGGATCTGCGTCCTCAAGATTAGCAGGAAACCGTCCTAGAAGAACTCGTACTCCTACCGCAGATGCTTTGCTCGAGAAGATCTCGAAGCTAGATCTCTTGGCTGAAATCAGTGCAATCAGAAGCAGGTCTGACTTGAACTTCAGAGGAAATGTGAGAGATGTTGTTTCATTGTCAAGGAGTGCACCTCCTGGACCACCGCCTCTGTGTTCAATTTGTCAGCATAAAACACCTGTATTTGGGAAACCTCCACGGTGGTTCAGCTACGCGGAACTGGAACTTGCAACTGGTGGCTTCTCCCAAGCAAATTTCTTGGCTGAGGGTGGGTTTGGGTCTGTTCACAGAGGTGTCCTACCTGATGGCCAGGCAATAGCTGTTAAGCAATACAAACTTGCTAGCTCCCAAGGTGATGTTGAGTTTTGCTCAGAGGTGGAAGTTCTAAGCTGTGCACAGCACCGGAATGTTGTAATGCTGATTGGTTTCTGTGTCGAAGACAAGAGGCGTTTGCTAGTTTACGAGTACATTTGCAATGGATCGCTGGATTCCCATCTCTATGGCCGTAACAAAGAGACGTTGGAATGGGCTGCAAGACAGAAAATTGCAGTAGGAGCTGCGAGAGGGCTGCGATATCTCCATGAAGAATGTAGGGTTGGTTGCATAATCCATCGTGATATGAGACCAAACAACATCCTTGTCACACATGATTTTGAACCACTGGTATGA
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| Protein seq | MAVVSGPDKGRGAEAVVVVAVRAAARDISKAALVWALTHVVQHGDTILLLAVMPPPHNSGKKFWGFPLFAGGCASAHRSVLTQNSDVADLCNQMMLKLRDFYDPNKIITKLKVIPASPGGVATESKRAQASWVVLDKELKHEEKRCMEELQCNIVAMKRSRPKVLRLNLVRSPPKESKSPLPPLPELSDSVGETESSINEQRCPIREPAVTPSSSPESETAFGSTDVGTSSVSSSDPGTSPYSASETNSTFKKEATKDNFQHSDVNVSDSESEASTPPAASSLQPWMADILKGSASSRLAGNRPRRTRTPTADALLEKISKLDLLAEISAIRSRSDLNFRGNVRDVVSLSRSAPPGPPPLCSICQHKTPVFGKPPRWFSYAELELATGGFSQANFLAEGGFGSVHRGVLPDGQAIAVKQYKLASSQGDVEFCSEVEVLSCAQHRNVVMLIGFCVEDKRRLLVYEYICNGSLDSHLYGRNKETLEWAARQKIAVGAARGLRYLHEECRVGCIIHRDMRPNNILVTHDFEPLV |
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| Function | Inactive protein kinase SELMODRAFT_444075 [UniProtKB/Swiss-Prot:P0DH62] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os05g51190 | LOC_Os05g51190.2 | Chr05 | 29359930 | 29364139 | - | MSU_osa1r7 | ||
| CDS seq | ATGGCGGTGGTCTCCGGTCCGGACAAGGGCCGGGGAGCGGAGGCGGTGGTTGTGGTGGCCGTGCGGGCCGCCGCCAGGGACATCTCCAAGGCCGCCCTCGTCTGGGCTCTCACGCACGTCGTCCAGCACGGCGACACCATCCTGCTCCTCGCCGTCATGCCGCCGCCGCACAACTCTGGCAAGAAGTTCTGGGGCTTCCCGCTCTTTGCAGGGGGTTGTGCGAGCGCCCACAGGAGCGTGTTGACTCAGAATTCGGATGTCGCTGATTTGTGTAATCAAATGATGCTGAAACTTCGTGATTTTTATGATCCGAACAAGATAATTACAAAACTTAAGGTTATCCCTGCATCTCCTGGTGGTGTGGCTACTGAATCAAAGCGTGCCCAAGCAAGCTGGGTTGTGCTAGACAAGGAGTTGAAACATGAAGAGAAACGTTGCATGGAAGAACTTCAATGCAACATTGTTGCTATGAAGCGCTCTCGGCCCAAAGTTCTTCGTCTGAATCTGGTGAGGTCTCCCCCAAAAGAATCAAAATCACCTCTCCCGCCACTTCCTGAGTTGAGTGATTCAGTTGGTGAAACCGAAAGCAGTATCAACGAACAGCGATGTCCGATTCGTGAACCGGCTGTGACACCAAGTAGCAGTCCAGAGTCAGAAACAGCTTTTGGTAGCACTGATGTTGGAACATCCTCCGTTTCAAGCTCAGACCCTGGCACATCTCCATATTCTGCTTCAGAAACGAATAGCACATTCAAGAAAGAGGCAACCAAGGATAACTTCCAGCACTCTGATGTCAATGTATCTGATTCTGAGAGTGAAGCTTCAACTCCTCCAGCAGCATCATCCCTTCAGCCATGGATGGCTGACATTTTAAAAGGATCTGCGTCCTCAAGATTAGCAGGAAACCGTCCTAGAAGAACTCGTACTCCTACCGCAGATGCTTTGCTCGAGAAGATCTCGAAGCTAGATCTCTTGGCTGAAATCAGTGCAATCAGAAGCAGGTCTGACTTGAACTTCAGAGGAAATGTGAGAGATGTTGTTTCATTGTCAAGGAGTGCACCTCCTGGACCACCGCCTCTGTGTTCAATTTGTCAGCATAAAACACCTGTATTTGGGAAACCTCCACGGTGGTTCAGCTACGCGGAACTGGAACTTGCAACTGGTGGCTTCTCCCAAGCAAATTTCTTGGCTGAGGGTGGGTTTGGGTCTGTTCACAGAGGTGTCCTACCTGATGGCCAGGCAATAGCTGTTAAGCAATACAAACTTGCTAGCTCCCAAGGTGATGTTGAGTTTTGCTCAGAGGTGGAAGTTCTAAGCTGTGCACAGCACCGGAATGTTGTAATGCTGATTGGTTTCTGTGTCGAAGACAAGAGGCGTTTGCTAGTTTACGAGTACATTTGCAATGGATCGCTGGATTCCCATCTCTATGGCCGTAACAAAGAGACGTTGGAATGGGCTGCAAGACAGAAAATTGCAGTAGGAGCTGCGAGAGGGCTGCGATATCTCCATGAAGAATGTAGGGTTGGTTGCATAATCCATCGTGATATGAGACCAAACAACATCCTTGTCACACATGATTTTGAACCACTGGTATGA
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| Protein seq | MAVVSGPDKGRGAEAVVVVAVRAAARDISKAALVWALTHVVQHGDTILLLAVMPPPHNSGKKFWGFPLFAGGCASAHRSVLTQNSDVADLCNQMMLKLRDFYDPNKIITKLKVIPASPGGVATESKRAQASWVVLDKELKHEEKRCMEELQCNIVAMKRSRPKVLRLNLVRSPPKESKSPLPPLPELSDSVGETESSINEQRCPIREPAVTPSSSPESETAFGSTDVGTSSVSSSDPGTSPYSASETNSTFKKEATKDNFQHSDVNVSDSESEASTPPAASSLQPWMADILKGSASSRLAGNRPRRTRTPTADALLEKISKLDLLAEISAIRSRSDLNFRGNVRDVVSLSRSAPPGPPPLCSICQHKTPVFGKPPRWFSYAELELATGGFSQANFLAEGGFGSVHRGVLPDGQAIAVKQYKLASSQGDVEFCSEVEVLSCAQHRNVVMLIGFCVEDKRRLLVYEYICNGSLDSHLYGRNKETLEWAARQKIAVGAARGLRYLHEECRVGCIIHRDMRPNNILVTHDFEPLV
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os05g51190 | LOC_Os05g51190.3 | Chr05 | 29359911 | 29364139 | - | MSU_osa1r7 | ||
| CDS seq | ATGGCGGTGGTCTCCGGTCCGGACAAGGGCCGGGGAGCGGAGGCGGTGGTTGTGGTGGCCGTGCGGGCCGCCGCCAGGGACATCTCCAAGGCCGCCCTCGTCTGGGCTCTCACGCACGTCGTCCAGCACGGCGACACCATCCTGCTCCTCGCCGTCATGCCGCCGCCGCACAACTCTGGCAAGAAGTTCTGGGGCTTCCCGCTCTTTGCAGGGGGTTGTGCGAGCGCCCACAGGAGCGTGTTGACTCAGAATTCGGATGTCGCTGATTTGTGTAATCAAATGATGCTGAAACTTCGTGATTTTTATGATCCGAACAAGATAATTACAAAACTTAAGGTTATCCCTGCATCTCCTGGTGGTGTGGCTACTGAATCAAAGCGTGCCCAAGCAAGCTGGGTTGTGCTAGACAAGGAGTTGAAACATGAAGAGAAACGTTGCATGGAAGAACTTCAATGCAACATTGTTGCTATGAAGCGCTCTCGGCCCAAAGTTCTTCGTCTGAATCTGGTGAGGTCTCCCCCAAAAGAATCAAAATCACCTCTCCCGCCACTTCCTGAGTTGAGTGATTCAGTTGGTGAAACCGAAAGCAGTATCAACGAACAGCGATGTCCGATTCGTGAACCGGCTGTGACACCAAGTAGCAGTCCAGAGTCAGAAACAGCTTTTGGTAGCACTGATGTTGGAACATCCTCCGTTTCAAGCTCAGACCCTGGCACATCTCCATATTCTGCTTCAGAAACGAATAGCACATTCAAGAAAGAGGCAACCAAGGATAACTTCCAGCACTCTGATGTCAATGTATCTGATTCTGAGAGTGAAGCTTCAACTCCTCCAGCAGCATCATCCCTTCAGCCATGGATGGCTGACATTTTAAAAGGATCTGCGTCCTCAAGATTAGCAGGAAACCGTCCTAGAAGAACTCGTACTCCTACCGCAGATGCTTTGCTCGAGAAGATCTCGAAGCTAGATCTCTTGGCTGAAATCAGTGCAATCAGAAGCAGGTCTGACTTGAACTTCAGAGGAAATGTGAGAGATGTTGTTTCATTGTCAAGGAGTGCACCTCCTGGACCACCGCCTCTGTGTTCAATTTGTCAGCATAAAACACCTGTATTTGGGAAACCTCCACGGTGGTTCAGCTACGCGGAACTGGAACTTGCAACTGGTGGCTTCTCCCAAGCAAATTTCTTGGCTGAGGGTGGGTTTGGGTCTGTTCACAGAGGTGTCCTACCTGATGGCCAGGCAATAGCTGTTAAGCAATACAAACTTGCTAGCTCCCAAGGTGATGTTGAGTTTTGCTCAGAGGTGGAAGTTCTAAGCTGTGCACAGCACCGGAATGTTGTAATGCTGATTGGTTTCTGTGTCGAAGACAAGAGGCGTTTGCTAGTTTACGAGTACATTTGCAATGGATCGCTGGATTCCCATCTCTATGGTAAGCTAATTATTATTCTGCAAATTCTATGTGACTGA
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| Protein seq | MAVVSGPDKGRGAEAVVVVAVRAAARDISKAALVWALTHVVQHGDTILLLAVMPPPHNSGKKFWGFPLFAGGCASAHRSVLTQNSDVADLCNQMMLKLRDFYDPNKIITKLKVIPASPGGVATESKRAQASWVVLDKELKHEEKRCMEELQCNIVAMKRSRPKVLRLNLVRSPPKESKSPLPPLPELSDSVGETESSINEQRCPIREPAVTPSSSPESETAFGSTDVGTSSVSSSDPGTSPYSASETNSTFKKEATKDNFQHSDVNVSDSESEASTPPAASSLQPWMADILKGSASSRLAGNRPRRTRTPTADALLEKISKLDLLAEISAIRSRSDLNFRGNVRDVVSLSRSAPPGPPPLCSICQHKTPVFGKPPRWFSYAELELATGGFSQANFLAEGGFGSVHRGVLPDGQAIAVKQYKLASSQGDVEFCSEVEVLSCAQHRNVVMLIGFCVEDKRRLLVYEYICNGSLDSHLYGKLIIILQILCD
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os05g51190 | LOC_Os05g51190.4 | Chr05 | 29359911 | 29364695 | - | MSU_osa1r7 | ||
| CDS seq | ATGGCGGTGGTCTCCGGTCCGGACAAGGGCCGGGGAGCGGAGGCGGTGGTTGTGGTGGCCGTGCGGGCCGCCGCCAGGGACATCTCCAAGGCCGCCCTCGTCTGGGCTCTCACGCACGTCGTCCAGCACGGCGACACCATCCTGCTCCTCGCCGTCATGCCGCCGCCGCACAACTCTGGCAAGAAGTTCTGGGGCTTCCCGCTCTTTGCAGGGGGTTGTGCGAGCGCCCACAGGAGCGTGTTGACTCAGAATTCGGATGTCGCTGATTTGTGTAATCAAATGATGCTGAAACTTCGTGATTTTTATGATCCGAACAAGATAATTACAAAACTTAAGGTTATCCCTGCATCTCCTGGTGGTGTGGCTACTGAATCAAAGCGTGCCCAAGCAAGCTGGGTTGTGCTAGACAAGGAGTTGAAACATGAAGAGAAACGTTGCATGGAAGAACTTCAATGCAACATTGTTGCTATGAAGCGCTCTCGGCCCAAAGTTCTTCGTCTGAATCTGGTGAGGTCTCCCCCAAAAGAATCAAAATCACCTCTCCCGCCACTTCCTGAGTTGAGTGATTCAGTTGGTGAAACCGAAAGCAGTATCAACGAACAGCGATGTCCGATTCGTGAACCGGCTGTGACACCAAGTAGCAGTCCAGAGTCAGAAACAGCTTTTGGTAGCACTGATGTTGGAACATCCTCCGTTTCAAGCTCAGACCCTGGCACATCTCCATATTCTGCTTCAGAAACGAATAGCACATTCAAGAAAGAGGCAACCAAGGATAACTTCCAGCACTCTGATGTCAATGTATCTGATTCTGAGAGTGAAGCTTCAACTCCTCCAGCAGCATCATCCCTTCAGCCATGGATGGCTGACATTTTAAAAGGATCTGCGTCCTCAAGATTAGCAGGAAACCGTCCTAGAAGAACTCGTACTCCTACCGCAGATGCTTTGCTCGAGAAGATCTCGAAGCTAGATCTCTTGGCTGAAATCAGTGCAATCAGAAGCAGGTCTGACTTGAACTTCAGAGGAAATGTGAGAGATGTTGTTTCATTGTCAAGGAGTGCACCTCCTGGACCACCGCCTCTGTGTTCAATTTGTCAGCATAAAACACCTGTATTTGGGAAACCTCCACGGTGGTTCAGCTACGCGGAACTGGAACTTGCAACTGGTGGCTTCTCCCAAGCAAATTTCTTGGCTGAGGGTGGGTTTGGGTCTGTTCACAGAGGTGTCCTACCTGATGGCCAGGCAATAGCTGTTAAGCAATACAAACTTGCTAGCTCCCAAGGTGATGTTGAGTTTTGCTCAGAGGTGGAAGTTCTAAGCTGTGCACAGCACCGGAATGTTGTAATGCTGATTGGTTTCTGTGTCGAAGACAAGAGGCGTTTGCTAGTTTACGAGTACATTTGCAATGGATCGCTGGATTCCCATCTCTATGGTAAGCTAATTATTATTCTGCAAATTCTATGTGACTGA
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| Protein seq | MAVVSGPDKGRGAEAVVVVAVRAAARDISKAALVWALTHVVQHGDTILLLAVMPPPHNSGKKFWGFPLFAGGCASAHRSVLTQNSDVADLCNQMMLKLRDFYDPNKIITKLKVIPASPGGVATESKRAQASWVVLDKELKHEEKRCMEELQCNIVAMKRSRPKVLRLNLVRSPPKESKSPLPPLPELSDSVGETESSINEQRCPIREPAVTPSSSPESETAFGSTDVGTSSVSSSDPGTSPYSASETNSTFKKEATKDNFQHSDVNVSDSESEASTPPAASSLQPWMADILKGSASSRLAGNRPRRTRTPTADALLEKISKLDLLAEISAIRSRSDLNFRGNVRDVVSLSRSAPPGPPPLCSICQHKTPVFGKPPRWFSYAELELATGGFSQANFLAEGGFGSVHRGVLPDGQAIAVKQYKLASSQGDVEFCSEVEVLSCAQHRNVVMLIGFCVEDKRRLLVYEYICNGSLDSHLYGKLIIILQILCD
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os05g51190 | LOC_Os05g51190.5 | Chr05 | 29359911 | 29364121 | - | MSU_osa1r7 | ||
| CDS seq | ATGGCGGTGGTCTCCGGTCCGGACAAGGGCCGGGGAGCGGAGGCGGTGGTTGTGGTGGCCGTGCGGGCCGCCGCCAGGGACATCTCCAAGGCCGCCCTCGTCTGGGCTCTCACGCACGTCGTCCAGCACGGCGACACCATCCTGCTCCTCGCCGTCATGCCGCCGCCGCACAACTCTGGCAAGAAGTTCTGGGGCTTCCCGCTCTTTGCAGGGGGTTGTGCGAGCGCCCACAGGAGCGTGTTGACTCAGAATTCGGATGTCGCTGATTTGTGTAATCAAATGATGCTGAAACTTCGTGATTTTTATGATCCGAACAAGATAATTACAAAACTTAAGGTTATCCCTGCATCTCCTGGTGGTGTGGCTACTGAATCAAAGCGTGCCCAAGCAAGCTGGGTTGTGCTAGACAAGGAGTTGAAACATGAAGAGAAACGTTGCATGGAAGAACTTCAATGCAACATTGTTGCTATGAAGCGCTCTCGGCCCAAAGTTCTTCGTCTGAATCTGGTGAGGTCTCCCCCAAAAGAATCAAAATCACCTCTCCCGCCACTTCCTGAGTTGAGTGATTCAGTTGGTGAAACCGAAAGCAGTATCAACGAACAGCGATGTCCGATTCGTGAACCGGCTGTGACACCAAGTAGCAGTCCAGAGTCAGAAACAGCTTTTGGTAGCACTGATGTTGGAACATCCTCCGTTTCAAGCTCAGACCCTGGCACATCTCCATATTCTGCTTCAGAAACGAATAGCACATTCAAGAAAGAGGCAACCAAGGATAACTTCCAGCACTCTGATGTCAATGTATCTGATTCTGAGAGTGAAGCTTCAACTCCTCCAGCAGCATCATCCCTTCAGCCATGGATGGCTGACATTTTAAAAGGATCTGCGTCCTCAAGATTAGCAGGAAACCGTCCTAGAAGAACTCGTACTCCTACCGCAGATGCTTTGCTCGAGAAGATCTCGAAGCTAGATCTCTTGGCTGAAATCAGTGCAATCAGAAGCAGGTCTGACTTGAACTTCAGAGGAAATGTGAGAGATGTTGTTTCATTGTCAAGGAGTGCACCTCCTGGACCACCGCCTCTGTGTTCAATTTGTCAGCATAAAACACCTGTATTTGGGAAACCTCCACGGTGGTTCAGCTACGCGGAACTGGAACTTGCAACTGGTGGCTTCTCCCAAGCAAATTTCTTGGCTGAGGGTGGGTTTGGGTCTGTTCACAGAGGTGTCCTACCTGATGGCCAGGCAATAGCTGTTAAGCAATACAAACTTGCTAGCTCCCAAGGTGATGTTGAGTTTTGCTCAGAGGTGGAAGTTCTAAGCTGTGCACAGCACCGGAATGTTGTAATGCTGATTGGTTTCTGTGTCGAAGACAAGAGGCGTTTGCTAGTTTACGAGTACATTTGCAATGGATCGCTGGATTCCCATCTCTATGGTAAGCTAATTATTATTCTGCAAATTCTATGTGACTGA
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| Protein seq | MAVVSGPDKGRGAEAVVVVAVRAAARDISKAALVWALTHVVQHGDTILLLAVMPPPHNSGKKFWGFPLFAGGCASAHRSVLTQNSDVADLCNQMMLKLRDFYDPNKIITKLKVIPASPGGVATESKRAQASWVVLDKELKHEEKRCMEELQCNIVAMKRSRPKVLRLNLVRSPPKESKSPLPPLPELSDSVGETESSINEQRCPIREPAVTPSSSPESETAFGSTDVGTSSVSSSDPGTSPYSASETNSTFKKEATKDNFQHSDVNVSDSESEASTPPAASSLQPWMADILKGSASSRLAGNRPRRTRTPTADALLEKISKLDLLAEISAIRSRSDLNFRGNVRDVVSLSRSAPPGPPPLCSICQHKTPVFGKPPRWFSYAELELATGGFSQANFLAEGGFGSVHRGVLPDGQAIAVKQYKLASSQGDVEFCSEVEVLSCAQHRNVVMLIGFCVEDKRRLLVYEYICNGSLDSHLYGKLIIILQILCD
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.000000 | 0.077436 | 0.062609 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_05g0589700 | RBH | 0.000000 | 0.000000 | 0.244484 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g41870 | SBH | 0.649499 | 0.619096 | 1.298917 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os05g0589700 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_05g0028990 | RBH | 0.089829 | 5.080340 | 1.651674 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_05g0028780 | RBH | 0.089836 | 1.313605 | 0.324757 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_05g0028780 | RBH | 1.699478 | 0.336353 | 3.785772 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_05g0028840 | RBH | 0.000000 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_05g0028710 | RBH | 3.106135 | 0.0 | 3.780653 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_05G0273900 | SBH | 2.9088345 | 1.6732455 | 2.610559 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_05g0028420 | RBH | 0.039363 | 0.0 | 0.150421 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_05G0472800 | RBH | 2.5229565 | 0.2263725 | 17.2150155 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_05g0028590 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_05g0028500 | RBH | 0.000000 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_05g0028740 | RBH | 0.000000 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_05g0028720 | RBH | 0.0 | 0.0 | 0.162504 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_05g0028770 | RBH | 0.0 | 1.084182 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_05G028280 | RBH | 0.000000 | 0.219282 | 2.230592 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_05g0028790 | RBH | 0.177398 | 0.0 | 1.167706 |
