Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os05g47750 | OGI:05074010 | 16/16 | Nipponbare | IRGSP 1.0 | MSU | Chr05:27353477-27357619 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | TAGTTTTCATCTGTAATGTCATGATTTATTTATGGAATAGATTAAATCATTATATGTCTATAATCTCAACAATACAATATCCCAACAAGGTGACAACGTTAACATGAGAAGTTCTGCTGATGCTTGCTACCTCATTCATGAATTCTTGGCCATCATCCTTGCAAGACTTCAGTAACTTCACTGCAATTGGCTTGCCATTTGGCATCTTGCCCATGTAAACAGTACCAAAGCCACCTTGGCCGAGCTTGTGACTAAAAGATTTGGTCATTGTTTTCACTTCTGAGTAAGAATATCTCTTTGGGTGTTGAGCTTCATGCTTTTGCAAGAAGGACTCGATGTTTGGTGCTTCTTTGGATTTTCCCATCGAGGACAATAGACCATGCCAGAACTTCTTAACACACAAGGTGCACATGAGAAGCAGGAACAATAAAATTACACCTGAAACGACTGATACACCTACAGTAACATTTTAAGACAATGTCATATTACCAAGGATAAAGAAATTTCAATTACTCTATTCCTTTTTCAATTGAAAATGCGTGGTTCTGGTATATACTCTCTATTTTTGTGCAAAACCTTCATCAAATTTTTTCATAACCATTTAGGTGACATGCAAATAACAAGGGATATTCCCTCGAGGGATTAAAATAGTTTCTCCATTTATTCATAGGGAAAAGAATGTACTGTATGTTAGTGGCAATCCTACTCATGAGAGTTTTTTTGCTTACAATTTTGTACTCGCAATATGTGCAATTAGTTGACTAATTACACTCGTAATGGGTTCCTGTCATTAATATTTTCCGTTGCTAGATTCAGATTTCCGGAAAAATATATAGGAGGCAGAGTTTTCATATATTTACCTATTGCAATAGCCTTTTTCTTCGATATCTTTGATCCTGCAAAATCATGAAACAATTTTATCAACGAAACAATCAGCAAGCGACAACATTAGCTAATTATTTGACAAAAAAAATGTTTTTGCAGGTCATAAAAAAATAGAATGCATGCATGCTCCTTTAGGAAAAAAAAGACACAATATCACACTAAAAGTGCATCATGATACCGGTCCTATTTTTCATCTTCTTCCTTCTTTTAAGACATCTTCATCTTATGGGGTGAGAAAACAAGGAATACAAGAAAATGGTCTACTTGGTTTGCCATTCAACACGAGCTTAATTATTTAAACGTTTTGGTCAAAAAATAACTAATTCAGTTCATACTACCTAATCCCCTAGTTGTCAATTTTGATAATGCTTATAGGTTAACAGTCGGCATCAACAAGAGAAAATTCTATAAATTTAAGTGAAGAGATTAATTCAAGTAAGTCTGAATTTTGTAGACTTGCAGAACGTAAGCGAATACTTGTCATTTGAGCCATGTCAAATGCACGCAAATCAAAGGTTGATCAAGGCCCCGTCAAAACTAGAACATCACCAAAAAATTGGCACATTAATCAAAGAAAGAAACGAAAATCGCCACTCACTATCCTAAACTTGTCTAAGATGAGGTCACCAGATTAAACTATAGGACCCAAACATAGCAGAAACAGACATCTTGAGTCAAACATAGTTGTCCTAATCGAAACAAATTAACTAAAAAAACAACCTTATCACCAACCTTGACTTGCCCTCAAGTTTGTTAGAAGATACAAACGGTACCTGATGAAGAACATGATCCGATAGCCTGACCATCAGGACAGTAACATGTATACTGATCAGGAAAACTGCCATTAAACCCACAATGCCCTCCAGAAGCCTTACAATCACTACACCAACCTACCCCAACTTTCCATCTCGCCGTGAAACCCCCTCTAATCACATCCACAAGGCTAGAATTTCCGGCAGCCAATGAGCCTGCCATGGTTGAATTGAATGGAACAACGAAACTTGAGCTGCATGATCCCAGAATATCTGATTCCAACGAGTCATCCTTGTTCTTGTGCAGCCTATAGTAGGAGCTTCCCCCAGAAACGCATGACAGAAGATCATAGATAAAAGGCAGAGATGAAGACTTGGCACTGCAGTTGACATAGACCGTCAGGAACTGATCAAGGTCTGTGTACATGAACCTGCTCTCGTCGATGGTGGTGTTGTGATAGCGATCCGGGCATGTCTCCTGAGGTTGAGTTTGATCGATGACCGCAAGAAACTTGTTGCCATAGTCGATATCTGTAACCTGGAACACGGTGGAATTCATGTGGATCATCAGCTTGTTGTCTGGGTTGCAGATGAGACGGTACCCAGGGTAAGAGCAGTAGTTTGGACGGTCGACGCCATTCGCCGAGAAGGGGTAATCGACGTCGAGCTTGAGTGATCCGCACTGGTAAGAAGCTGTGGTACAATTTGTGTACCGGAAGAAGGCATCGGATTCTTGTACAGAAAGTGGCACTGAAGAGATCAGCAGTAGGGTGATGAGGAGTGGCAGCGCACACAGGGGATGCATCTGCTCCAAGGCGTGGTGATGATGAACTGAAGAGCAACAGGAAAGGGGAGAGGAGGAGGAGGAGCTGCTTGATGAACAAAGATAAGAGGGGACAAAGAACAGCTACAGTAGGTCAAGAAGGGTTGGCTGAGTAAACGTGGGGAACAGAAAATCGTGGGAGGAAATTGACCTGATGGGTTGAGTTAAACTACCATTGACCATGGACCTGCGTAAAACTTAAACTTTTCGTAAAAAAATTCTTAGCCACAAAGAAATGCCTTAGGTAGGTAGCTTGAGCACAGAGCAGGACGAGCGTCACCGATTTCGACCGCGTTAGTATAGTAGTATTATCTACTAACTGAATTTTGACCTCGTCAAGATTAGCGACTTTGAACAGTATCAACAAGACTGCACGTCAACGTTGGTTGCCGCGCTACTTCTACTGCTGCCCACAGTTCGTCAGAGCACCCGCAATGGTAAAGTAGGGTGCTCTCTATAAAACATGTACATCTCAGCAATAGACTAGATTAATAGTAAACCACCTCAATAGTATGTCTACATAGGTATCTATAGCTCTCTCATGCATTGCTTCGTTTTTCTCTATAGACTATCTCTAAGCTAGTAGATAGCTTTGCTCTCTCTCTTCATTTAATATCTTCCAAGTAGAAAAATATGCTGACATGGATCTCTTGTAGATAGCTTATAGATAACCATTGTGGGTGCCCTCAGTGTGTTTTTCTTATTCTGTATTTTAATTAATTTCTTGTGTTTCCAAAATTAATTAATATCAGTTTAAAAATAAAATTTGTGTATTAATTTCGTGGGGAAGACGAGTTACCGCAGGTCGAGCTGCTGGCGCGGCCATCGGAGCACAGGCATCCCAGGAACTCGTTCTTCGTGCCGTAGCTGCAGCGTCCCCCGGATACCTCGCACTCGTGGCACATCCCCGCCGTCGGGTCCCAGCTCAGCTGGAACCCGCGCTTCAGCACGGCGCCGTATCCATCGTCGCCCAATTTGCCGTAGTACTTCTCGTTCATGAGCCAATCCTTGAGCACGGGCACCATCACCACCTCCTTGCACAGCCCCAACCACTCCGTCTCGCCTGCCACGTCCGGCTGCGTGGCGACGAAAGACGGCGCCGTGTCTCGCCGCCCCGGGAAGTCGAAGGTGCTGCAGTTGATCGGGCGGATGTACGGCGGCGGCCGCAGCACGACGTTGGCCGTGGAGTTGCAGTCGAAGAAGAAGGTGATGCTGTCGTTGCCGGGGCTCGGGAACGTGAGCACCTCCGGGAGGGTGACGTTGTGCTTCACCCTCGGGCAGTCGCCGCCGTCGAGCGCGTCGGAGTCGGCCACCGTGACGGTGTGGTTGCCGTGGTTGATCTCCAGGACGGTGTAGTTGTAATTCCCGAGTCGCAGGATGGCGCGGTCGTGGTCGCAGATGATGCCCAGCCACGGGTAGCCGCAGTAGCGGGTGTTCCCGTCGACGACGACGACCTGATCCGTCGTGTTGGAGAGGTAGAAAGGGTACTTGATCTCCACCTGCTCGCCGCAAAAGATCGGCCTCGCGCATATGGCGTCGTCGTACGTTCCGCCGGCCGCTGTCGCGCCCTCACCGCCGGAAGCGATGAACCAGAAGAGGAGGAGAAGGTGGGAAGCATGGCTACCGAGCAGAGCAAGCCCGTATCTTCTCATTGTTTGCTCGAAACGCGTCGATAATTGTCAT
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| CDS seq | ATGAGAAGATACGGGCTTGCTCTGCTCGGTAGCCATGCTTCCCACCTTCTCCTCCTCTTCTGGTTCATCGCTTCCGGCGGTGAGGGCGCGACAGCGGCCGGCGGAACGTACGACGACGCCATATGCGCGAGGCCGATCTTTTGCGGCGAGCAGGTGGAGATCAAGTACCCTTTCTACCTCTCCAACACGACGGATCAGGTCGTCGTCGTCGACGGGAACACCCGCTACTGCGGCTACCCGTGGCTGGGCATCATCTGCGACCACGACCGCGCCATCCTGCGACTCGGGAATTACAACTACACCGTCCTGGAGATCAACCACGGCAACCACACCGTCACGGTGGCCGACTCCGACGCGCTCGACGGCGGCGACTGCCCGAGGGTGAAGCACAACGTCACCCTCCCGGAGGTGCTCACGTTCCCGAGCCCCGGCAACGACAGCATCACCTTCTTCTTCGACTGCAACTCCACGGCCAACGTCGTGCTGCGGCCGCCGCCGTACATCCGCCCGATCAACTGCAGCACCTTCGACTTCCCGGGGCGGCGAGACACGGCGCCGTCTTTCGTCGCCACGCAGCCGGACGTGGCAGGCGAGACGGAGTGGTTGGGGCTGTGCAAGGAGGTGGTGATGGTGCCCGTGCTCAAGGATTGGCTCATGAACGAGAAGTACTACGGCAAATTGGGCGACGATGGATACGGCGCCGTGCTGAAGCGCGGGTTCCAGCTGAGCTGGGACCCGACGGCGGGGATGTGCCACGAGTGCGAGGTATCCGGGGGACGCTGCAGCTACGGCACGAAGAACGAGTTCCTGGGATGCCTGTGCTCCGATGGCCGCGCCAGCAGCTCGACCTGCGGATCAAAGATATCGAAGAAAAAGGCTATTGCAATAGGTGTATCAGTCGTTTCAGGTGTAATTTTATTGTTCCTGCTTCTCATGTGCACCTTGTGTGTTAAGAAGTTCTGGCATGGTCTATTGTCCTCGATGGGAAAATCCAAAGAAGCACCAAACATCGAGTCCTTCTTGCAAAAGCATGAAGCTCAACACCCAAAGAGATATTCTTACTCAGAAGTGAAAACAATGACCAAATCTTTTAGTCACAAGCTCGGCCAAGGTGGCTTTGGTACTGTTTACATGGGCAAGATGCCAAATGGCAAGCCAATTGCAGTGAAGTTACTGAAGTCTTGCAAGGATGATGGCCAAGAATTCATGAATGAGGTAGCAAGCATCAGCAGAACTTCTCATGTTAACGTTGTCACCTTGTTGGGATATTGTATTGTTGAGATTATAGACATATAA
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| Protein seq | MRRYGLALLGSHASHLLLLFWFIASGGEGATAAGGTYDDAICARPIFCGEQVEIKYPFYLSNTTDQVVVVDGNTRYCGYPWLGIICDHDRAILRLGNYNYTVLEINHGNHTVTVADSDALDGGDCPRVKHNVTLPEVLTFPSPGNDSITFFFDCNSTANVVLRPPPYIRPINCSTFDFPGRRDTAPSFVATQPDVAGETEWLGLCKEVVMVPVLKDWLMNEKYYGKLGDDGYGAVLKRGFQLSWDPTAGMCHECEVSGGRCSYGTKNEFLGCLCSDGRASSSTCGSKISKKKAIAIGVSVVSGVILLFLLLMCTLCVKKFWHGLLSSMGKSKEAPNIESFLQKHEAQHPKRYSYSEVKTMTKSFSHKLGQGGFGTVYMGKMPNGKPIAVKLLKSCKDDGQEFMNEVASISRTSHVNVVTLLGYCIVEIIDI |
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| Function | LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.1 [UniProtKB/Swiss-Prot:Q9FF31] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os05g47750 | LOC_Os05g47750.1 | Chr05 | 27353477 | 27357619 | - | MSU_osa1r7 | ||
| CDS seq | ATGAGAAGATACGGGCTTGCTCTGCTCGGTAGCCATGCTTCCCACCTTCTCCTCCTCTTCTGGTTCATCGCTTCCGGCGGTGAGGGCGCGACAGCGGCCGGCGGAACGTACGACGACGCCATATGCGCGAGGCCGATCTTTTGCGGCGAGCAGGTGGAGATCAAGTACCCTTTCTACCTCTCCAACACGACGGATCAGGTCGTCGTCGTCGACGGGAACACCCGCTACTGCGGCTACCCGTGGCTGGGCATCATCTGCGACCACGACCGCGCCATCCTGCGACTCGGGAATTACAACTACACCGTCCTGGAGATCAACCACGGCAACCACACCGTCACGGTGGCCGACTCCGACGCGCTCGACGGCGGCGACTGCCCGAGGGTGAAGCACAACGTCACCCTCCCGGAGGTGCTCACGTTCCCGAGCCCCGGCAACGACAGCATCACCTTCTTCTTCGACTGCAACTCCACGGCCAACGTCGTGCTGCGGCCGCCGCCGTACATCCGCCCGATCAACTGCAGCACCTTCGACTTCCCGGGGCGGCGAGACACGGCGCCGTCTTTCGTCGCCACGCAGCCGGACGTGGCAGGCGAGACGGAGTGGTTGGGGCTGTGCAAGGAGGTGGTGATGGTGCCCGTGCTCAAGGATTGGCTCATGAACGAGAAGTACTACGGCAAATTGGGCGACGATGGATACGGCGCCGTGCTGAAGCGCGGGTTCCAGCTGAGCTGGGACCCGACGGCGGGGATGTGCCACGAGTGCGAGGTATCCGGGGGACGCTGCAGCTACGGCACGAAGAACGAGTTCCTGGGATGCCTGTGCTCCGATGGCCGCGCCAGCAGCTCGACCTGCGGATCAAAGATATCGAAGAAAAAGGCTATTGCAATAGGTGTATCAGTCGTTTCAGGTGTAATTTTATTGTTCCTGCTTCTCATGTGCACCTTGTGTGTTAAGAAGTTCTGGCATGGTCTATTGTCCTCGATGGGAAAATCCAAAGAAGCACCAAACATCGAGTCCTTCTTGCAAAAGCATGAAGCTCAACACCCAAAGAGATATTCTTACTCAGAAGTGAAAACAATGACCAAATCTTTTAGTCACAAGCTCGGCCAAGGTGGCTTTGGTACTGTTTACATGGGCAAGATGCCAAATGGCAAGCCAATTGCAGTGAAGTTACTGAAGTCTTGCAAGGATGATGGCCAAGAATTCATGAATGAGGTAGCAAGCATCAGCAGAACTTCTCATGTTAACGTTGTCACCTTGTTGGGATATTGTATTGTTGAGATTATAGACATATAA
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| Protein seq | MRRYGLALLGSHASHLLLLFWFIASGGEGATAAGGTYDDAICARPIFCGEQVEIKYPFYLSNTTDQVVVVDGNTRYCGYPWLGIICDHDRAILRLGNYNYTVLEINHGNHTVTVADSDALDGGDCPRVKHNVTLPEVLTFPSPGNDSITFFFDCNSTANVVLRPPPYIRPINCSTFDFPGRRDTAPSFVATQPDVAGETEWLGLCKEVVMVPVLKDWLMNEKYYGKLGDDGYGAVLKRGFQLSWDPTAGMCHECEVSGGRCSYGTKNEFLGCLCSDGRASSSTCGSKISKKKAIAIGVSVVSGVILLFLLLMCTLCVKKFWHGLLSSMGKSKEAPNIESFLQKHEAQHPKRYSYSEVKTMTKSFSHKLGQGGFGTVYMGKMPNGKPIAVKLLKSCKDDGQEFMNEVASISRTSHVNVVTLLGYCIVEIIDI
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.299373 | 0.000000 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_05g0550800 | SBH | 0.000000 | 0.461488 | 0.000000 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g49614 | RBH | 0.264194 | 0.165643 | 0.203216 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os05g0550800 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_05g0026000 | RBH | 0.094289 | 2.027925 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_05g0025810 | RBH | 0.0 | 0.0 | 0.114025 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_05g0025760 | RBH | 0.0 | 0.0 | 0.727580 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_05g0025820 | RBH | 0.028221 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_05g0025790 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_05G0424800 | RBH | 0.008057 | 1.7846005 | 0.089048 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_05g0025410 | RBH | 0.052368 | 0.000000 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_05G0436500 | RBH | 1.1013385 | 12.137452 | 0.2985875 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_05g0025620 | RBH | 0.000000 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_05g0025520 | RBH | 0.049332 | 0.000000 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_05g0025720 | RBH | 0.0 | 2.498707 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_05g0025740 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_05g0025760 | RBH | 0.0 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_05G025200 | RBH | 0.000000 | 0.0 | 0.250499 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_05g0025750 | RBH | 0.0 | 0.0 | 0.196166 |
