Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os05g46020 | OGI:05072180 | 16/16 | Nipponbare | IRGSP 1.0 | MSU | Chr05:26682472-26684208 | ||||||||
| Gene Symbol | WRKY7, OsWRKY7 | ||||||||||
| DNA seq | CTCCCGCACCCGCTCCGAACCTTCTCCCTCCTCACGAAGCTCACCGCGAAGCCGGCAAAATCCTCCCGGAGAGAGAGACACAAACACAACACAACCAGCTCCCCCGCGCCCCGCGTGCGATCGATCACGATCGATCTCATCCCTCTCGATCGCCTACTACTACCAGTACAAATCCACCCCGCCACCACTACATCATCCCCTCATATCCATGCAGATTTAGCGCCAATCCTTATAAATACGGAGCTTTCGCGCCGGCCTCGTACTCGGCCATGGCGGCAGTCGGCGCGCACGCAGCGGTCTACCACCACCCGGTCTCGGGCCTCTCGGCGCCGGCGGGCGACGCCGCCTACTCGATGTCATCGTACTTCTCCCACGGGGGAAGCTCGACCTCCAGCTCCGCGTCCAGCTTCTCCGCCGCCCTCGCCGCCGCAACGACGCCGCCGCTTCCCGACCCGTCGGGGTCGCAGTTCGACATCTCCGAGTTCTTCTTCGACGACGCGCCTCCGGCCGCCGTGTTCAATGGCGCGCCCACCGCCGCGCTGCCGGATGGCGCCGCCGCAAACGCAACAAGGTGAGTGGCTAGCGGCGTGTGTCACTTGTCAAGTAGAGTACTACTCTCAAGTGTGCAATCACCTGTTCATTTGGTCTGAATTGGGGGCATTTGATCGGGAAAATTCAGGAGCGCGGCGGAGGCGGTGCCGGCGCCGGCGCCGGCGGCCGTGGAGAGGCCGCGGACGGAGCGGATCGCGTTCCGGACGAAGTCAGAGATCGAGATTCTTGACGACGGCTACAAGTGGCGCAAGTACGGCAAGAAGTCCGTCAAGAACAGCCCCAACCCAAGGTACTAACTAACCAACTAAACCAAAATCATATCCCCTTCACAAAATTCAAGATGATCATATCATCATCATAAATCATCCCGTCGTCGTCGTCGTCGCCATCACTTCGATCATCAAATACACCGATGATGCAATTAATCACGCGAATTCCATCGTCATATACTATATGTGCAAGTGCAAGTCTCTTTCCTGGCAATGAATGAATGGACATCGCTAACTAACAGCGATCGATCGATTGTGCGTTGCAGGAACTACTACCGGTGCTCGACGGAAGGGTGCAACGTGAAGAAGAGGGTGGAGCGGGACAAGGACGACCCGAGCTACGTGGTGACGACGTACGAGGGGACGCACAACCACGTGAGCCCCAGCACGGTGTACTACGCCAGCCAGGACGCCGCCTCCGGCCGCTTCTTCGTCGCCGGCACGCAGCCGCCAGGTTCTCTCAATTAACCGCGCGCGTACGGTTAATTTGATCGATCGGGTCAGCCATGGGACTTTTCCAATGCTAGCTAGCTAATAGTGTAGGTGTTCTGGGCCGGATTCTTGATCGAGATAGCAGCCTCTTGATTGAGATGCCCAGATGGGTCATTTTGGATGTAGCTGGATCTTTTTTTCCCCTTTTCTTCTCTCGATCTCTGTCCCGTCCTTTTTGCCTGTTTCGATCATTGGAAGGCCGGGCCGGCCTGGCTGGTTTGCAGCGATAGTGATCAAATGCTGTGCTGCTGTGTTTCTGTGCTCTTGAGGATCCTCCCAACTATCCCCCTTGAGCCTAGGTAATATAGCCATGGGAAATGTAACATATATATACTGTTTAACCGTGCAATAAAAATGTACAGAGCTTGAAATTTTGGTTGTATGTTATGAAGGACTTTTAAATATTCTACTCAGACTTGAATTT
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| CDS seq | ATGGCGGCAGTCGGCGCGCACGCAGCGGTCTACCACCACCCGGTCTCGGGCCTCTCGGCGCCGGCGGGCGACGCCGCCTACTCGATGTCATCGTACTTCTCCCACGGGGGAAGCTCGACCTCCAGCTCCGCGTCCAGCTTCTCCGCCGCCCTCGCCGCCGCAACGACGCCGCCGCTTCCCGACCCGTCGGGGTCGCAGTTCGACATCTCCGAGTTCTTCTTCGACGACGCGCCTCCGGCCGCCGTGTTCAATGGCGCGCCCACCGCCGCGCTGCCGGATGGCGCCGCCGCAAACGCAACAAGGAGCGCGGCGGAGGCGGTGCCGGCGCCGGCGCCGGCGGCCGTGGAGAGGCCGCGGACGGAGCGGATCGCGTTCCGGACGAAGTCAGAGATCGAGATTCTTGACGACGGCTACAAGTGGCGCAAGTACGGCAAGAAGTCCGTCAAGAACAGCCCCAACCCAAGGAACTACTACCGGTGCTCGACGGAAGGGTGCAACGTGAAGAAGAGGGTGGAGCGGGACAAGGACGACCCGAGCTACGTGGTGACGACGTACGAGGGGACGCACAACCACGTGAGCCCCAGCACGGTGTACTACGCCAGCCAGGACGCCGCCTCCGGCCGCTTCTTCGTCGCCGGCACGCAGCCGCCAGGTTCTCTCAATTAA
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| Protein seq | MAAVGAHAAVYHHPVSGLSAPAGDAAYSMSSYFSHGGSSTSSSASSFSAALAAATTPPLPDPSGSQFDISEFFFDDAPPAAVFNGAPTAALPDGAAANATRSAAEAVPAPAPAAVERPRTERIAFRTKSEIEILDDGYKWRKYGKKSVKNSPNPRNYYRCSTEGCNVKKRVERDKDDPSYVVTTYEGTHNHVSPSTVYYASQDAASGRFFVAGTQPPGSLN |
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| Function | Probable WRKY transcription factor 51 [UniProtKB/Swiss-Prot:Q93WU9] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os05g46020 | LOC_Os05g46020.1 | Chr05 | 26682472 | 26684208 | + | MSU_osa1r7 | ||
| CDS seq | ATGGCGGCAGTCGGCGCGCACGCAGCGGTCTACCACCACCCGGTCTCGGGCCTCTCGGCGCCGGCGGGCGACGCCGCCTACTCGATGTCATCGTACTTCTCCCACGGGGGAAGCTCGACCTCCAGCTCCGCGTCCAGCTTCTCCGCCGCCCTCGCCGCCGCAACGACGCCGCCGCTTCCCGACCCGTCGGGGTCGCAGTTCGACATCTCCGAGTTCTTCTTCGACGACGCGCCTCCGGCCGCCGTGTTCAATGGCGCGCCCACCGCCGCGCTGCCGGATGGCGCCGCCGCAAACGCAACAAGGAGCGCGGCGGAGGCGGTGCCGGCGCCGGCGCCGGCGGCCGTGGAGAGGCCGCGGACGGAGCGGATCGCGTTCCGGACGAAGTCAGAGATCGAGATTCTTGACGACGGCTACAAGTGGCGCAAGTACGGCAAGAAGTCCGTCAAGAACAGCCCCAACCCAAGGAACTACTACCGGTGCTCGACGGAAGGGTGCAACGTGAAGAAGAGGGTGGAGCGGGACAAGGACGACCCGAGCTACGTGGTGACGACGTACGAGGGGACGCACAACCACGTGAGCCCCAGCACGGTGTACTACGCCAGCCAGGACGCCGCCTCCGGCCGCTTCTTCGTCGCCGGCACGCAGCCGCCAGGTTCTCTCAATTAA
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| Protein seq | MAAVGAHAAVYHHPVSGLSAPAGDAAYSMSSYFSHGGSSTSSSASSFSAALAAATTPPLPDPSGSQFDISEFFFDDAPPAAVFNGAPTAALPDGAAANATRSAAEAVPAPAPAAVERPRTERIAFRTKSEIEILDDGYKWRKYGKKSVKNSPNPRNYYRCSTEGCNVKKRVERDKDDPSYVVTTYEGTHNHVSPSTVYYASQDAASGRFFVAGTQPPGSLN
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 1.167711 | 0.631797 | 0.111068 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_05g0537100 | RBH | 2.074788 | 1.128700 | 0.518434 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g51690 | RBH | 0.000000 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os05g0537100 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_05g0025070 | RBH | 0.0 | 2.276645 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_05g0024860 | RBH | 0.101097 | 0.0 | 0.587013 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_05g0024870 | RBH | 0.773595 | 0.000000 | 0.000000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_05g0024900 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_05g0024900 | RBH | 0.0 | 0.000000 | 1.701352 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_05G0414700 | RBH | 2.010388 | 21.9482745 | 9.8496815 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_05g0024530 | RBH | 0.0 | 0.0 | 0.135945 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_05G0425800 | RBH | 2.3888295 | 17.3073525 | 0.125304 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_05g0024720 | RBH | 0.051992 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_05g0024590 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_05g0024790 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_05g0024790 | RBH | 0.000000 | 0.0 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_05g0024830 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_05G024280 | RBH | 0.000000 | 0.0 | 0.195702 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_05g0024730 | RBH | 0.0 | 4.284374 | 0.0 |
