Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os05g45010 | OGI:05070420 | 16/16 | Nipponbare | IRGSP 1.0 | MSU | Chr05:26164769-26167408 | ||||||||
| Gene Symbol | RLCK190, OsRLCK190 | ||||||||||
| DNA seq | ATGGCTATCAAGGTAAAGTATCAGGTGAAGAAGAACTGGATGGGTGATCCGTGTGTTCCGAAGACACTTGCTTGGGATAGTTTGACCTGCAGCTATTCCACTTCCATCCGTCCAAGAATCACTAGCCTGTAAGTAGTTCACATCTATATAGACTTGTCTTCACCACAAAGATAAATGAGAAAAAAATAAAGCAGAATGCACTGATTAAATGTACAATGAAATTGATATAGATATATTTGCTCCATGCAGAAATCTGTCCTCAAGTGATCTAAGGGGTGATATATCGTCTTCCTTCGCGAATCTCAAGGGAGTCCAATACTTGTATGTTCTAAGCTCTTTATAAGCTTTTTTTGGAGGGGATTTCTGTCATAAATATATATGGGGGAAAAACTGGGTCCATGTTTTGCAGGAATTTGTCAAACAACAATTTGACAGGCTCAATTCCAGATGCCCTTTCACAATTACCTCTATTGTCAGTCTTGTAAGTAAAACATCAAGATTTGCCTAATTCCAATTTTTATAGCACCTTTTGTTGTCTCGTACTAATACTATATGATTTTGTTTAGAGATTTGGCAGGAAACCAGCTCAGTGGATCAATTCCATCTGGACTTCTCAAAAGAATTCAAGATGGCTCCCTAGATCTAAGGTCAGCACAACCCGTCTCCCAATAATTAACACACCAACCACGACAAAAACATAGTGCAAATATTTATCTTATCTTTGAGCTTCTTTGAGGTCCTTGGGAAGTACTAAGATGCACTTAAAAACTCTTCATTTTTTGGTAGAGACGGAAATAATCCAAACTTATACACCAATGGCAATTCATGCAAGCTTGTGAAAAGGAACAACAAGTTAGTGATCTACATAGTTGTTCCCATAGTTCTGGTTATGGTGATAGTACCAATATATCTAATACTCTTTTACCTGAAAAGAAAAAGGCTAGGTGAGGCTTTCTACAAATACATCACTCATGTGGTTTATTAATAGCTAAGCATATCCACAAACAAAACTAACCCATTTCATATGCATCCTTTGCATATCAAGGACCAAGGAGCAATTCCACAGAACCACAAAATGAGAAGGCAGAGTATGCTTCGAAAAATCGTGGCCACATGCATAGTTCATCACTACAGCTTGAGAACCGTCGGTTCACATACCGGGAACTAGAGATGATGACAGACAACTTCCAGCTAGAGCTTGGAAGGGGAGGGTTTGGGTGTGTCTATGATGGGTTTTTGGAGGATCACACTCGAGTGGCAGTCAAGTTGATGTTTAAAAACTCTAAGCAAGGAGACAAGGAGTTCCTTGGAGAGGTATATGTTGTTCTCTTTTGACTAATTGTTGATCTTTCTAGAGTGAAAATTGAAAGTTGCAACCGATCACTTAGGCACAGATTTTAACCCGGATTCATCACAAGAATCTTGTTTCCATGATTGGATACTGCAAGGATGGGGATAACATGGCACTTGTTTATGAGTACATGTCAGAAGGAACTCTACAAGAACACATTGCAGTACCTAAAATATTTAGATTCTACGTGCATGGTATGGTACAACAGCTCCAAAATTGACCCAAAAAAAGAATGATAATGATAATGATAATGATAAGCCATTGATATTTTACTTTTATTTATCTCTAGATCATTTGAAATGCTTTTGGTTGATATGATACACTTCATTTACTTTGCCTGCAATAGAAGAAAACAGCAGGAGAAGATTCTTACCCTGGAGACGGCGGCTCCAGATCGCTCTAGAATCTGCTCAAGGCAAGTAATGCTAAACCTAATGCTGCTATTGCTTTTCTTGGAGACTTGATTTTGCTAAAAAAGTGAATATTGACATCGTGATGTGTAGGGCTAGAGTATCTACACAAAGGTTGCAATCCACCTCTCATCCATAGGGATGTGAAGGCAACCAACATTCTATTGAATGCGATGTTGGAGGCGAAGATTGCTGATTTCGGTTTGTCCAAGGCTTTTAATCGCAACAATGACACTCATGTTTCCACAAACACACTTGCTGGCACACCTGGATACGTTGATCCAGAGTTCGTAATCCCATCTACCTTATTTAATTTGGTCTTCCAAATACCACTTATAGTTTTTCTATTGTTTTTCTAGTGCAAGTACTAATATGCATTACATTGGCTAAACATGTAGGTACTTAATGACAATGCAACCCACAACCAAGAGTGATGTTTATAGCTTCGGTGTTGTGTTGTTGGAGTTGGTCACAGGGAAGCCAGCCCTACTACGGGACCTAGATAACACTAGCATTATCCAATGGGTACAGCAGCACCTGGCACGAGGCAACATCGAGGATGTGGTGGATGCACGCATGCATGGAGACCATGACATTAACAGTGTGTGGAAGGTTGTGGACATCGCACTCAAGTGCACCATGCAGGAGTCTATACATCGACCCACAATGACTGGCGTGGTGGCAATGTTGCAAGAGTGCATTGAACTTGAAAATAGACATCTGAAAGACTACGCGGCCAATAGTGAAAACCACAACTCAAGTTATAATACATACGGTGTTGACCAATCCACTAATGTGATCCAGAGTAATGATGCGTTTGAAGTTGGGCATAACATTGCAAGGGTCCCAACAATGGCCACTGGTCCTGTTGCACGATGA
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| CDS seq | ATGGCTATCAAGGTAAAGTATCAGGTGAAGAAGAACTGGATGGGTGATCCGTGTGTTCCGAAGACACTTGCTTGGGATAGTTTGACCTGCAGCTATTCCACTTCCATCCGTCCAAGAATCACTAGCCTAAATCTGTCCTCAAGTGATCTAAGGGGTGATATATCGTCTTCCTTCGCGAATCTCAAGGGAGTCCAATACTTGAATTTGTCAAACAACAATTTGACAGGCTCAATTCCAGATGCCCTTTCACAATTACCTCTATTGTCAGTCTTAGATTTGGCAGGAAACCAGCTCAGTGGATCAATTCCATCTGGACTTCTCAAAAGAATTCAAGATGGCTCCCTAGATCTAAGTTCATCACTACAGCTTGAGAACCGTCGGTTCACATACCGGGAACTAGAGATGATGACAGACAACTTCCAGCTAGAGCTTGGAAGGGGAGGGTTTGGGTGTGTCTATGATGGGTTTTTGGAGGATCACACTCGAGTGGCAGTCAAGTTGATGTTTAAAAACTCTAAGCAAGGAGACAAGGAGTTCCTTGGAGAGGATGGGGATAACATGGCACTTGTTTATGAGTACATGTCAGAAGGAACTCTACAAGAACACATTGCAGTACCTAAAATATTTAGATTCTACGTGCATGAAGAAAACAGCAGGAGAAGATTCTTACCCTGGAGACGGCGGCTCCAGATCGCTCTAGAATCTGCTCAAGGCAAGTACTTAATGACAATGCAACCCACAACCAAGAGTGATGTTTATAGCTTCGGTGTTGTGTTGTTGGAGTTGGTCACAGGGAAGCCAGCCCTACTACGGGACCTAGATAACACTAGCATTATCCAATGGGTACAGCAGCACCTGGCACGAGGCAACATCGAGGATGTGGTGGATGCACGCATGCATGGAGACCATGACATTAACAGTGTGTGGAAGGTTGTGGACATCGCACTCAAGTGCACCATGCAGGAGTCTATACATCGACCCACAATGACTGGCGTGGTGGCAATGTTGCAAGAGTGCATTGAACTTGAAAATAGACATCTGAAAGACTACGCGGCCAATAGTGAAAACCACAACTCAAGTTATAATACATACGGTGTTGACCAATCCACTAATGTGATCCAGAGTAATGATGCGTTTGAAGTTGGGCATAACATTGCAAGGGTCCCAACAATGGCCACTGGTCCTGTTGCACGATGA
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| Protein seq | MAIKVKYQVKKNWMGDPCVPKTLAWDSLTCSYSTSIRPRITSLNLSSSDLRGDISSSFANLKGVQYLNLSNNNLTGSIPDALSQLPLLSVLDLAGNQLSGSIPSGLLKRIQDGSLDLSSSLQLENRRFTYRELEMMTDNFQLELGRGGFGCVYDGFLEDHTRVAVKLMFKNSKQGDKEFLGEDGDNMALVYEYMSEGTLQEHIAVPKIFRFYVHEENSRRRFLPWRRRLQIALESAQGKYLMTMQPTTKSDVYSFGVVLLELVTGKPALLRDLDNTSIIQWVQQHLARGNIEDVVDARMHGDHDINSVWKVVDIALKCTMQESIHRPTMTGVVAMLQECIELENRHLKDYAANSENHNSSYNTYGVDQSTNVIQSNDAFEVGHNIARVPTMATGPVAR |
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| Function | Probable LRR receptor-like serine/threonine-protein kinase At1g07550 [UniProtKB/Swiss-Prot:C0LGD8] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os05g45010 | LOC_Os05g45010.1 | Chr05 | 26164769 | 26167408 | + | MSU_osa1r7 | ||
| CDS seq | ATGGCTATCAAGGTAAAGTATCAGGTGAAGAAGAACTGGATGGGTGATCCGTGTGTTCCGAAGACACTTGCTTGGGATAGTTTGACCTGCAGCTATTCCACTTCCATCCGTCCAAGAATCACTAGCCTAAATCTGTCCTCAAGTGATCTAAGGGGTGATATATCGTCTTCCTTCGCGAATCTCAAGGGAGTCCAATACTTGAATTTGTCAAACAACAATTTGACAGGCTCAATTCCAGATGCCCTTTCACAATTACCTCTATTGTCAGTCTTAGATTTGGCAGGAAACCAGCTCAGTGGATCAATTCCATCTGGACTTCTCAAAAGAATTCAAGATGGCTCCCTAGATCTAAGTTCATCACTACAGCTTGAGAACCGTCGGTTCACATACCGGGAACTAGAGATGATGACAGACAACTTCCAGCTAGAGCTTGGAAGGGGAGGGTTTGGGTGTGTCTATGATGGGTTTTTGGAGGATCACACTCGAGTGGCAGTCAAGTTGATGTTTAAAAACTCTAAGCAAGGAGACAAGGAGTTCCTTGGAGAGGATGGGGATAACATGGCACTTGTTTATGAGTACATGTCAGAAGGAACTCTACAAGAACACATTGCAGTACCTAAAATATTTAGATTCTACGTGCATGAAGAAAACAGCAGGAGAAGATTCTTACCCTGGAGACGGCGGCTCCAGATCGCTCTAGAATCTGCTCAAGGCAAGTACTTAATGACAATGCAACCCACAACCAAGAGTGATGTTTATAGCTTCGGTGTTGTGTTGTTGGAGTTGGTCACAGGGAAGCCAGCCCTACTACGGGACCTAGATAACACTAGCATTATCCAATGGGTACAGCAGCACCTGGCACGAGGCAACATCGAGGATGTGGTGGATGCACGCATGCATGGAGACCATGACATTAACAGTGTGTGGAAGGTTGTGGACATCGCACTCAAGTGCACCATGCAGGAGTCTATACATCGACCCACAATGACTGGCGTGGTGGCAATGTTGCAAGAGTGCATTGAACTTGAAAATAGACATCTGAAAGACTACGCGGCCAATAGTGAAAACCACAACTCAAGTTATAATACATACGGTGTTGACCAATCCACTAATGTGATCCAGAGTAATGATGCGTTTGAAGTTGGGCATAACATTGCAAGGGTCCCAACAATGGCCACTGGTCCTGTTGCACGATGA
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| Protein seq | MAIKVKYQVKKNWMGDPCVPKTLAWDSLTCSYSTSIRPRITSLNLSSSDLRGDISSSFANLKGVQYLNLSNNNLTGSIPDALSQLPLLSVLDLAGNQLSGSIPSGLLKRIQDGSLDLSSSLQLENRRFTYRELEMMTDNFQLELGRGGFGCVYDGFLEDHTRVAVKLMFKNSKQGDKEFLGEDGDNMALVYEYMSEGTLQEHIAVPKIFRFYVHEENSRRRFLPWRRRLQIALESAQGKYLMTMQPTTKSDVYSFGVVLLELVTGKPALLRDLDNTSIIQWVQQHLARGNIEDVVDARMHGDHDINSVWKVVDIALKCTMQESIHRPTMTGVVAMLQECIELENRHLKDYAANSENHNSSYNTYGVDQSTNVIQSNDAFEVGHNIARVPTMATGPVAR
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_05g0525501 | SBH | 0.0 | 0.000000 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g54630 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os05g0525501 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_05g0024260 | SBH | 0.0 | 9.166125 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_05g0024150 | SBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_05g0024140 | SBH | 0.0 | 10.844530 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_05g0024090 | SBH | 0.0 | 0.460373 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_05g0024170 | SBH | 0.0 | 34.650661 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_05G0404100 | SBH | 0.0051835 | 0.301636 | 0.0027315 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_05g0023750 | SBH | 0.0 | 1.760136 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_05G0416300 | SBH | 0.001579 | 0.095063 | 0.006649 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_05g0023930 | SBH | 0.0 | 0.121929 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_05g0023830 | RBH | 0.0 | 1.003375 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_05g0024020 | SBH | 0.0 | 5.712156 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_05g0024020 | RBH | 0.0 | 2.447435 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_05g0024070 | SBH | 0.0 | 7.450215 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_05G023450 | SBH | 0.0 | 1.017449 | 0.069454 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_05g0023850 | SBH | 0.0 | 6.612853 | 0.0 |
