Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
LOC_Os05g41370 OGI:05065600 | 15/16 Nipponbare | IRGSP 1.0 | MSU Chr05:24230695-24234793
Gene Symbol -
DNA seq

ATTAACGAGTTGTTGCTTCCTCCTCGAGAGAGCTCAACGGCGACGAAGCAGCGCGACGCGACGCGACGCCCTGCGGTGGCGTGGCAACACCGCAACAATGGCGCCGCCGCCGCCGTCGCCGCCGTGCCGGCCGCGAGTCAAGCCCGAGCGCGCCCTTCTGTGCTTCTCCCTCCTCCTCCTCCTGACCGCCACCACGGCGAACGCCAGCATCACCGACTGCCCAACTACAAGCAGCACCAACTCCAGCCATGTCGACGACGGTGCCTTCGGGGCCAACCTCCGCGCTCTCCTCTCCTCCCTTTCCGCAGCCGCGGCGGCATCGTCGTCGGGGTTCGCCGAGAACGCGACCGGCGCGGCGCCGGACACGGCGTACGGCCTCGCGCAGTGCCGCGGCGGCATCGTCGGCGGCGGCAATGGCACCAGCTGCCGCTCCTGCCTCGACGACTCGGTGCGGGACGCGGCCAAGGCGTGCCCCGGCGAGAAATCCGCCGTGATCATCTCCGACTACTGCCTCGTCCGGTACTCCAACGCGAGCTTCGCCGGCGCCGCCGACGAGCGGACGGTGAAGCTCTGGTGGAACACGGACAACGCGACGCAGCCGGAGAGGTTCAAGTCGCTGCTGGGGACGCTGATGGGCAACCTCACCGACGCGGCGGCGCGCGCGTCGTCGCCGCTGATGTTCGCGGCCGGCGAGACCGACCTCCCGCCCTTCACCAAGATCTACGGCATGGCGCAGTGCACCCGCGACCTCGCCGCCGGCGACTGCTACCGCTGCCTCGTCGGCGCCGTCAACAACATCCCGAAATGCTGCGACGGGAAGCAGGGCGGGCAGGTCATCACGAGGAGCTGCTCCATCCGGTTCGAGGTGTACCCGTTCTTCGACGCCCAGGCCGCCAAGGCGGCCATGTCGCCTGCGCCGGCGCCGGCGCCGGTGACGACGCCCACCGGGGTCAATGGTAAGTCAAGTCAAAGGTCTCTCCCGTGCGCGTTTGCACTTGCGTCGCTTTCTCCACGCGTTTGCTTGTATAGGTCGCGAAAAGAAAAAAGTTTAGTTGTCATATTGGATATTTGATCAGATATTGGAAGGAGTTTTCGGACACGAATGAAAAAACTAATTTCACCTGGAAACCGCGAGAGCACACGTGGGTTACTATATTACTTATGACTAATTATGGACTAATTAGGATTAAAAGATTTGTCTCGTGATTTCCCCCCAACTGTGCAATTAATTTTTTTAATCTATATTTAATGCTTCATGTATATATCTAAAGATTCGATGTAATGTTTTTGGAAAAAATTTATGGGAACTAAACCAGGCCTTAACCAGGCCTTAGTAGCTGGTTGCAACTTGCAACTTTCTGACTCTAAATTCCGAACACTTGTTCTCTTCTTCAACCGTGTTTTCTCCTTCAACCTTGTCGAGTGGACAGAACAAAGTGGTTTGCACCCATAGATTCTGATAGTACAATGACTTTTGTGCTCTGAATTTGTGTTTTGACCATGGTAAAACATGTTTATGCAGGAAGTAATCACACAGTCAGTAAGTCTGTGATTGTCCCAGTTACTGTGGGAGTTGCCGTGTTACTAGTGGTAATACTGCTGCTAATTGCCCTTTGTCTGTGCAAGAGGAACAGAAAACCACATAAGCATATGATGATTGGAAGCGTCGGTAAGTCCTCAAGGCTTGAAACAACTGCATTAGCATTATAGCACATCTGAAGAATATTTAAGGGCTTAACTCGTCAGTTTTTCCTATGAACAGATCTTGGAGATGAAGACGAAATGAGAGGCTCAGAATCTCTCTTGTATGATTTGAGTACTCTAAGAGCAGCAACTGCCAACTTCTCAGAAGAAAATAAGCTCGGAGAAGGTGGATTTGGCCCAGTCTACAAAGTAAGTTAAGTCTGCAACCTGACAATCAAGTTCAGTTCTAATTAGCCTGTAAAAGTAGCTCACAGATTCATACTTGCAGTTATGCAAGCAATGTGATCTACATTACTTGAACTTACCGATTCTGATGCTGTTGAGTTCAGGGTACACTGCAAAATGGTCAAGAGATTGCAGTGAAGAGATTGTCAGCAACTTCCCATCAAGGGCAATTGGAGATGAAGAATGAGGTAGTCTTGGTTGCAAAGCTTCAGCACAAGAATCTGGTCAGGCTGCTAGGATGCTGCATCGAAGAACGGGAGAAAATCCTAGTTTATGAGTTCCTCTGTAACAAAAGCCTCGACACTATCCTTTTCGGTACTTCATTCAGATAATCTAAGCCTATTTAATTTTATATATCCTTGTTTAGTAAGCTAATCAACAGAATTTACATGGACAATTCAGACACTTCAAGACAGCAAGACCTTAACTGGGAGCAAAGATTCAAGATCATTGAAGGGATCGGAAGAGGGCTTCTTTATCTTCATGAAGATTCAAGGCTCAAGATCATCCACCGTGATCTCAAAGCTAGCAACATCTTGTTAGATGTAGACATGAACCCCAAGATATCAGACTTCGGCCTTGCCAAGTTATTTAACATGGAAGCGAGCGTAGCAAACACTAGCAGGATTGCTGGAACCTAGTAAGTGCTTCAGATATTAGAGTCCTCTCTTGAAAAAGTATATCTATACTAAATGAGCACTCGAAGGAAACTCCCACGTTAACTTATGAAAGATTTGACCATTAATTAGATAATTGTATTATCATGACCATATATCATATTAAGAGTTTCTGTAAAATAAAACAGGTGGTTTTAAATCAGTGAGCTCATTTTAGTTTTTCTAAAATATAGTAATATTTTAAGAATTCGGAATTGATAAATATGAAATTGTACCCATATTGAATTCTCAATTTAGTATGTCATTGATTTAATTTTAAGATTCGAAAATAATAACTAAGAAGTTGTAAGTTGTTAATGGCATATGGTCTCTTTTTTCAACTTGAATGTCACTCCCTCCGTTTCATATAATAAGTCGTTTGGTTTTTTTTTTCTAGTCAAAGTTTTTAAAATTTGATCAAATTTATAAAAAAATATATATTATTATTTTCAACACAAAGCGATCATATTATTAGATTTAATGAAACTAATTTGATATTTTAGATGTTGCTAAATTTTTCTACAAACTTGATTAAATTTAATAAAATTTAACTATGAAAAAGGTCAAACGACTTGTAATATTGTAATATGTAATATGAAACTGATAGAGTATTACATTACTATCATTTGGAAATTTGAGCTGAGAGCATTAGATATACCTCTTGTTCAGCGGATACATGGCGCCGGAGTACGCGCTGCACGGCATCTTCTCGGCCAAATCCGACGTCTTCAGCTACGGCGTGCTCCTCCTCGAGATCGTCACCGGCCGCCGCAACACCTGCCTCCATGACTCCGAGGATCTCCTGGCATTTGTAATCCCCGCGCAAATCCTATCTAAAGTTTAATCACAAACATTGCAATCTGCAATTCGAAAGACTTTTGCATGGATATACAACCGTCTGAGACTGATTCTGCTCGCCGGCGTGCAGGTCTGGAGGCACTGGAGCCGCGGCGGCGCCGGGGAGCTGCTCGACGGCTGCCCCGCCGCCGGCCGCCGGCCGCAGGAGCTTCTGCGGTGCATCCACGTGGGGCTCCTCTGCGTGCAGGAGGACCCGCAGCTCCGCCCCGGCATGGCGGCAGTCGTCGTCATGCTCAACAGCCGCTCGGTCACGCTGCCGGCGCCCTCGGCGCCGGCGTTCGTCTCCGCGAGCCGTGGGATCGGCGGAAGCCCGCCGCCGGCGGCGGCGGCGGGAGATGCGCCGGCGAGGAGCACGGATCACGAGGTTCCTACGGCTGCTCGATAGCCGTCGATCAACGGCGCTTCTGTCTCTGAACTAGAGCCCCGGTGACATCGGAGATTCGGAGGACTGACGGCTGGGCCCGGCTTATGTTTCTGCTCTGAATTTGAAAATTTGTTGCTCGTTTTGCATTCAAAATTTCTCTCGGATTTAATGCATTTCTGTATGCCGTTCAGTGTTGGAGTAGTTAAGTGGATATGAAAATGTAATGACGGCTTTGTAATTTAAATTTTTCGACGAGCTTAGCAATTCAAGTGGTTTATGTAGTACAAATCAA

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CDS seq

ATGGCGCCGCCGCCGCCGTCGCCGCCGTGCCGGCCGCGAGTCAAGCCCGAGCGCGCCCTTCTGTGCTTCTCCCTCCTCCTCCTCCTGACCGCCACCACGGCGAACGCCAGCATCACCGACTGCCCAACTACAAGCAGCACCAACTCCAGCCATGTCGACGACGGTGCCTTCGGGGCCAACCTCCGCGCTCTCCTCTCCTCCCTTTCCGCAGCCGCGGCGGCATCGTCGTCGGGGTTCGCCGAGAACGCGACCGGCGCGGCGCCGGACACGGCGTACGGCCTCGCGCAGTGCCGCGGCGGCATCGTCGGCGGCGGCAATGGCACCAGCTGCCGCTCCTGCCTCGACGACTCGGTGCGGGACGCGGCCAAGGCGTGCCCCGGCGAGAAATCCGCCGTGATCATCTCCGACTACTGCCTCGTCCGGTACTCCAACGCGAGCTTCGCCGGCGCCGCCGACGAGCGGACGGTGAAGCTCTGGTGGAACACGGACAACGCGACGCAGCCGGAGAGGTTCAAGTCGCTGCTGGGGACGCTGATGGGCAACCTCACCGACGCGGCGGCGCGCGCGTCGTCGCCGCTGATGTTCGCGGCCGGCGAGACCGACCTCCCGCCCTTCACCAAGATCTACGGCATGGCGCAGTGCACCCGCGACCTCGCCGCCGGCGACTGCTACCGCTGCCTCGTCGGCGCCGTCAACAACATCCCGAAATGCTGCGACGGGAAGCAGGGCGGGCAGGTCATCACGAGGAGCTGCTCCATCCGGTTCGAGGTGTACCCGTTCTTCGACGCCCAGGCCGCCAAGGCGGCCATGTCGCCTGCGCCGGCGCCGGCGCCGGTGACGACGCCCACCGGGGTCAATGGAAGTAATCACACAGTCAGTAAGTCTGTGATTGTCCCAGTTACTGTGGGAGTTGCCGTGTTACTAGTGGTAATACTGCTGCTAATTGCCCTTTGTCTGTGCAAGAGGAACAGAAAACCACATAAGCATATGATGATTGGAAGCGTCGATCTTGGAGATGAAGACGAAATGAGAGGCTCAGAATCTCTCTTGTATGATTTGAGTACTCTAAGAGCAGCAACTGCCAACTTCTCAGAAGAAAATAAGCTCGGAGAAGGTGGATTTGGCCCAGTCTACAAAGGTACACTGCAAAATGGTCAAGAGATTGCAGTGAAGAGATTGTCAGCAACTTCCCATCAAGGGCAATTGGAGATGAAGAATGAGGTAGTCTTGGTTGCAAAGCTTCAGCACAAGAATCTGGTCAGGCTGCTAGGATGCTGCATCGAAGAACGGGAGAAAATCCTAGTTTATGAGTTCCTCTGTAACAAAAGCCTCGACACTATCCTTTTCGACACTTCAAGACAGCAAGACCTTAACTGGGAGCAAAGATTCAAGATCATTGAAGGGATCGGAAGAGGGCTTCTTTATCTTCATGAAGATTCAAGGCTCAAGATCATCCACCGTGATCTCAAAGCTAGCAACATCTTGTTAGATGTAGACATGAACCCCAAGATATCAGACTTCGGCCTTGCCAAGTTATTTAACATGGAAGCGAGCGTAGCAAACACTAGCAGGATTGCTGGAACCTACGGATACATGGCGCCGGAGTACGCGCTGCACGGCATCTTCTCGGCCAAATCCGACGTCTTCAGCTACGGCGTGCTCCTCCTCGAGATCGTCACCGGCCGCCGCAACACCTGCCTCCATGACTCCGAGGATCTCCTGGCATTTGTCTGGAGGCACTGGAGCCGCGGCGGCGCCGGGGAGCTGCTCGACGGCTGCCCCGCCGCCGGCCGCCGGCCGCAGGAGCTTCTGCGGTGCATCCACGTGGGGCTCCTCTGCGTGCAGGAGGACCCGCAGCTCCGCCCCGGCATGGCGGCAGTCGTCGTCATGCTCAACAGCCGCTCGGTCACGCTGCCGGCGCCCTCGGCGCCGGCGTTCGTCTCCGCGAGCCGTGGGATCGGCGGAAGCCCGCCGCCGGCGGCGGCGGCGGGAGATGCGCCGGCGAGGAGCACGGATCACGAGGTTCCTACGGCTGCTCGATAG

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Protein seq

MAPPPPSPPCRPRVKPERALLCFSLLLLLTATTANASITDCPTTSSTNSSHVDDGAFGANLRALLSSLSAAAAASSSGFAENATGAAPDTAYGLAQCRGGIVGGGNGTSCRSCLDDSVRDAAKACPGEKSAVIISDYCLVRYSNASFAGAADERTVKLWWNTDNATQPERFKSLLGTLMGNLTDAAARASSPLMFAAGETDLPPFTKIYGMAQCTRDLAAGDCYRCLVGAVNNIPKCCDGKQGGQVITRSCSIRFEVYPFFDAQAAKAAMSPAPAPAPVTTPTGVNGSNHTVSKSVIVPVTVGVAVLLVVILLLIALCLCKRNRKPHKHMMIGSVDLGDEDEMRGSESLLYDLSTLRAATANFSEENKLGEGGFGPVYKGTLQNGQEIAVKRLSATSHQGQLEMKNEVVLVAKLQHKNLVRLLGCCIEEREKILVYEFLCNKSLDTILFDTSRQQDLNWEQRFKIIEGIGRGLLYLHEDSRLKIIHRDLKASNILLDVDMNPKISDFGLAKLFNMEASVANTSRIAGTYGYMAPEYALHGIFSAKSDVFSYGVLLLEIVTGRRNTCLHDSEDLLAFVWRHWSRGGAGELLDGCPAAGRRPQELLRCIHVGLLCVQEDPQLRPGMAAVVVMLNSRSVTLPAPSAPAFVSASRGIGGSPPPAAAAGDAPARSTDHEVPTAAR

Function Cysteine-rich receptor-like protein kinase 25 [UniProtKB/Swiss-Prot:Q9M0X5]

Transcripts

Gene Transcript Chromosome Start End Strand Source
LOC_Os05g41370 LOC_Os05g41370.1 Chr05 24230695 24234793 + MSU_osa1r7
CDS seq

ATGGCGCCGCCGCCGCCGTCGCCGCCGTGCCGGCCGCGAGTCAAGCCCGAGCGCGCCCTTCTGTGCTTCTCCCTCCTCCTCCTCCTGACCGCCACCACGGCGAACGCCAGCATCACCGACTGCCCAACTACAAGCAGCACCAACTCCAGCCATGTCGACGACGGTGCCTTCGGGGCCAACCTCCGCGCTCTCCTCTCCTCCCTTTCCGCAGCCGCGGCGGCATCGTCGTCGGGGTTCGCCGAGAACGCGACCGGCGCGGCGCCGGACACGGCGTACGGCCTCGCGCAGTGCCGCGGCGGCATCGTCGGCGGCGGCAATGGCACCAGCTGCCGCTCCTGCCTCGACGACTCGGTGCGGGACGCGGCCAAGGCGTGCCCCGGCGAGAAATCCGCCGTGATCATCTCCGACTACTGCCTCGTCCGGTACTCCAACGCGAGCTTCGCCGGCGCCGCCGACGAGCGGACGGTGAAGCTCTGGTGGAACACGGACAACGCGACGCAGCCGGAGAGGTTCAAGTCGCTGCTGGGGACGCTGATGGGCAACCTCACCGACGCGGCGGCGCGCGCGTCGTCGCCGCTGATGTTCGCGGCCGGCGAGACCGACCTCCCGCCCTTCACCAAGATCTACGGCATGGCGCAGTGCACCCGCGACCTCGCCGCCGGCGACTGCTACCGCTGCCTCGTCGGCGCCGTCAACAACATCCCGAAATGCTGCGACGGGAAGCAGGGCGGGCAGGTCATCACGAGGAGCTGCTCCATCCGGTTCGAGGTGTACCCGTTCTTCGACGCCCAGGCCGCCAAGGCGGCCATGTCGCCTGCGCCGGCGCCGGCGCCGGTGACGACGCCCACCGGGGTCAATGGAAGTAATCACACAGTCAGTAAGTCTGTGATTGTCCCAGTTACTGTGGGAGTTGCCGTGTTACTAGTGGTAATACTGCTGCTAATTGCCCTTTGTCTGTGCAAGAGGAACAGAAAACCACATAAGCATATGATGATTGGAAGCGTCGATCTTGGAGATGAAGACGAAATGAGAGGCTCAGAATCTCTCTTGTATGATTTGAGTACTCTAAGAGCAGCAACTGCCAACTTCTCAGAAGAAAATAAGCTCGGAGAAGGTGGATTTGGCCCAGTCTACAAAGGTACACTGCAAAATGGTCAAGAGATTGCAGTGAAGAGATTGTCAGCAACTTCCCATCAAGGGCAATTGGAGATGAAGAATGAGGTAGTCTTGGTTGCAAAGCTTCAGCACAAGAATCTGGTCAGGCTGCTAGGATGCTGCATCGAAGAACGGGAGAAAATCCTAGTTTATGAGTTCCTCTGTAACAAAAGCCTCGACACTATCCTTTTCGACACTTCAAGACAGCAAGACCTTAACTGGGAGCAAAGATTCAAGATCATTGAAGGGATCGGAAGAGGGCTTCTTTATCTTCATGAAGATTCAAGGCTCAAGATCATCCACCGTGATCTCAAAGCTAGCAACATCTTGTTAGATGTAGACATGAACCCCAAGATATCAGACTTCGGCCTTGCCAAGTTATTTAACATGGAAGCGAGCGTAGCAAACACTAGCAGGATTGCTGGAACCTACGGATACATGGCGCCGGAGTACGCGCTGCACGGCATCTTCTCGGCCAAATCCGACGTCTTCAGCTACGGCGTGCTCCTCCTCGAGATCGTCACCGGCCGCCGCAACACCTGCCTCCATGACTCCGAGGATCTCCTGGCATTTGTCTGGAGGCACTGGAGCCGCGGCGGCGCCGGGGAGCTGCTCGACGGCTGCCCCGCCGCCGGCCGCCGGCCGCAGGAGCTTCTGCGGTGCATCCACGTGGGGCTCCTCTGCGTGCAGGAGGACCCGCAGCTCCGCCCCGGCATGGCGGCAGTCGTCGTCATGCTCAACAGCCGCTCGGTCACGCTGCCGGCGCCCTCGGCGCCGGCGTTCGTCTCCGCGAGCCGTGGGATCGGCGGAAGCCCGCCGCCGGCGGCGGCGGCGGGAGATGCGCCGGCGAGGAGCACGGATCACGAGGTTCCTACGGCTGCTCGATAG

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Protein seq

MAPPPPSPPCRPRVKPERALLCFSLLLLLTATTANASITDCPTTSSTNSSHVDDGAFGANLRALLSSLSAAAAASSSGFAENATGAAPDTAYGLAQCRGGIVGGGNGTSCRSCLDDSVRDAAKACPGEKSAVIISDYCLVRYSNASFAGAADERTVKLWWNTDNATQPERFKSLLGTLMGNLTDAAARASSPLMFAAGETDLPPFTKIYGMAQCTRDLAAGDCYRCLVGAVNNIPKCCDGKQGGQVITRSCSIRFEVYPFFDAQAAKAAMSPAPAPAPVTTPTGVNGSNHTVSKSVIVPVTVGVAVLLVVILLLIALCLCKRNRKPHKHMMIGSVDLGDEDEMRGSESLLYDLSTLRAATANFSEENKLGEGGFGPVYKGTLQNGQEIAVKRLSATSHQGQLEMKNEVVLVAKLQHKNLVRLLGCCIEEREKILVYEFLCNKSLDTILFDTSRQQDLNWEQRFKIIEGIGRGLLYLHEDSRLKIIHRDLKASNILLDVDMNPKISDFGLAKLFNMEASVANTSRIAGTYGYMAPEYALHGIFSAKSDVFSYGVLLLEIVTGRRNTCLHDSEDLLAFVWRHWSRGGAGELLDGCPAAGRRPQELLRCIHVGLLCVQEDPQLRPGMAAVVVMLNSRSVTLPAPSAPAFVSASRGIGGSPPPAAAAGDAPARSTDHEVPTAAR

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.0 0.0 0.0

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_05g0493100 RBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | MSU NA NA NA NA NA
Nipponbare | IRGSP 1.0 | RAP-db Os05g0493100 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_05g0021960 RBH 0.0 4.247004 0.000000
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_05g0021920 RBH 0.0 0.0 0.0
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_05g0021850 RBH 0.0 0.000000 0.0
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_05g0021840 RBH 0.0 0.0 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_05g0021930 RBH 0.0 1.436396 0.364972
Minghui 63 | MH63RS3 | HZAU OsMH63_05G0375100 RBH 0.4743095 4.9626065 0.0317655
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_05g0021500 RBH 0.0 0.0 0.0
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_05G0384500 SBH 2.032153 5.550104 5.3436935
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_05g0021790 RBH 0.0 0.0 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_05g0021720 RBH 0.0 0.000000 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_05g0021840 RBH 0.0 0.0 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_05g0021890 RBH 0.136592 0.0 0.0
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_05g0021870 RBH 0.0 0.0 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_05G021310 RBH 0.0 0.0 0.000000
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_05g0021720 RBH 0.0 0.0 0.327868
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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