Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os05g40760 | OGI:05064740 | 1/16 | Nipponbare | IRGSP 1.0 | MSU | Chr05:23890638-23896522 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ATGTCAAATAAGGTCACATTTCAGATAGTTCACGGTGAAGGAAATATTAGATTTGGTCCAGATGGTGTTGATCTGTCAGATTTTGTAATGACATCTAAGGGCATCGATAGGCCTGCGGAGAGAACATTTCAGTCAATTTATAGTTGGTTGTTGAGAGGATTTAGAATAGACCAAGAAGTCTACACAATGTCAGTATCAGTTGTAGTGAGTCGTGCAACAGAAGGTTATTTTTGGGAACTAATGCCGATGGACAGCACTGCTGCTTGGAGACGGTATGTGGAAATGGCTTTTGAACGGTCATGGCCCCTCGTTATATTTGTGTCGGTACAAGAGAAAGATATAAATGTTTCAATGCAAACCGAAGATGTAGAGGGTCCTATCAATGCAGGGGATGTTGTTGGACCATCGATGCAAAATGAGGAAAATCAACCAAGGGAGGAGCAGGCCATGGGCATGGCGGATGAGGGGGAGAGAGTCGGTATAATTGTTGATGAAATGGAGAGGGAAGATTCGGATAATGAGGAAGCGGACGACGACGCATCATCCGATGAGGAAGGTGATGTAATGGCCACTGATTGGGCAAATGAGGACTTCTCTGGACTTGTTATATCAGAGGGTGATCATGTACCCTGGGAGTATAAGGAGAACGAGGTAATTGACGGTGCAAGGTATGCTCATAAGGATGAGATGAAGGAGGCGGTGAAGCATTGGGCAGTTTCCTTGCAGAGAGAGTTTAGGGTGGTCAAGTCAACAAATTATGTGTATGAAGTGAGGTGCATGAAGGAAGATTGTCCGTGGCGTGTCCATGCATATAAGGGTAAATGGAATGATTATTGGAAAGTTAGCATTGTGACCGAGCACAAGTGCTACTTACAAGGGGTGGAGAAGTATCACCGAAACATCACTTCAGCTTTTGTGGCAAGTGAGATGTACAGCAGTGTTGTTGGTAACATTGGCTTTGAACCAAAATCAATTATTAGGCACATCGAGAACAAATTCAAGTACACTATAAGCTATGCAAAGGCCTGGAGAGCCAAACAAAAGATTATTGAGATGAGGTATGGCACATTTGAAGCTTCTTATGATAATTTGCCTCGTTTGTTAGCCACCATTGCCCAGAGGAATAATAATACTTACTATGACCTACATACATTTACATCGGTTGATGATCGAACAAAGAGTGTGCTGCAAAGAGCCTTTTTCTCATTGGGTGCTTGCATCAATGCTTTTGTGCATTGTCGACCTGTTCTATGCATAGATGGAACTTTTATGACAGGTAAATACCGAGGTCAGATATTGACAGCAATTGGGTGTGATGGGAACAACCAGGTTCTACCTATGGCTTTTGCATTTGTAGAGAGTGAGAACACTGAAAGCTGGTACTGGTTCCTAGAGAGAGTGCACATTGCAGTGGTGCGTATGAGGCCCAACGTTTGCCTTATACATGATCGTCATGCGGGTATGTTGCGGGCTATTGACTACTTGCAGAACGGTTGGGATGAGAAGGGACTTCCAGCTAAGTGGCCTGATGTTCGGAGTCGGTAGTGCATGCGTCACATGGGTGCAAATTTCTACAAGCAATTCAAGAACAAGCATCTTATGGAGCTCTTTAAGAGGCTATGTGCACAGAGCCAAGAGAAGAAATTTAATGAGTTGTGGGACAAGTTGGATGAGTTGACAATGAAGCAAACAGATGAGCAATCTCGCAGACCACAAGTTGAAGGTGACGAGCCTCCCATACCTCTTGGTGCATTACATGATGACCCACCAACAATGAGAAGGAGGTCAGGGTCGTCCATCAGAAATTTCACTCAGTGGATTGAGAATGAGCGTAAGGAGAAGTGGTCTCTATTATTCGACACCGATAGATCTCGGTATGGCATAATGACAACCAATTTGGCAGAGGTGTACAACTAGGTAATGCGAGGAGTTCGGGTACTTCCATTGGTTGCTATTGTTGAATTCATCCTTCACGGCACGCAAGCGTACTTTAGGGATCGATACAAGAAAATTGGTCCGTCCATGGCCGATAACAACATAGTGTTTGGCAACGTAGTGATAAAGTACATGGAAGATAAAATCAAAAAGGCACGGAGACATAGAGTTGTTGCTCAAGGCACACAAGTGCATCGGTATGAAATAATGTGTGTTGATAGGAGCAGGCGTGGTATCTATCGCAAGCAAGCCGTGCAGGAATGTGTCTTGAAGGCGGATGGTGGATGTACCTGCAGTTGTATGAAGCCGAAGCTTCATCACCTTCCTTGCTCACACGTTCTAGCAGCCACGTACCATGTCCTCTGTGAGGCGTGCACGAAGACAGACGCGGGAGCGATCATCGCTAGCTGCCCTATGTTGCTTCAGCTTTGGGCAGCCGAGAGGTTTGCCATAGGTCGACCAGTGGTGGACAGCGCACCCTACGGGGTTGGTCGCAGCGCGCAGTGGCCAGAGGACGGTCCCACGATGGGGACTTACTGGTGTCGACGTGGGGTTAGTGCAACTTCGCTGCGTTATAAGTTTATCAGTCGTCTTCTTTTTTTTCTTCACATAACATGTCTAATTCCGATCATGTTTATTGCAGCGTCGTTACGCTCACGTCCAGGTGAGACGAGGTTACCCGGACTTCGTGTTCGAGTTTGACCGTCTCCAGCCGAGCGACGTCATCTGGGAGCCGTACACAGAAGAGGCCGTCGCTGCGAGAGCACCGCTAGGACTTTCGTCGTTGTGCACACGCGACCAGGCTTACTGGCTCACCATCCTGCCGATGGTGTTCGACATTTTCGTTGAGCCTCACTGCCCGCAGCGTGTGATGAGACAGTTCGGACTTAGGCAGGTGTTTCCGGGCAACGTGCAGCCGACCGTCCTCCCTGCCGACCACTCGTGAGTTCGGATTGTTCATTTCTAAATTTTTATGATAATTACTTCATCGAGCCATATAATTTACCTCTCTTCACAGGTTGACTCGACGGGGACAGCTAGCAGGCGCACTTTGGGCTCCACGTGTACAGCAGTACGTTGACGACTGGGTGTTAGCTACAGAGGAGGTGATCAACGAGCTCTTCCCACACACGGAGGAGAACTACCGTGACTACCTTCGCTGGTACCTTCCTCGCACTCGTGCGCGTGTGACCTTCACTCCAGACGCCCCAGAGCCGCACGTTGCCGCTGTGACGGACGCGTATCCCACGCACCGTGACCGAGACTACTTCGTGGGGGTACGTCGAATTTGTATTAGTTCTTACAATTATTTCATTTATCTTGCATAATATAGGACAACTACTGAATTTTTTATTTCCATCTTGCATAGGCTGATGCCGCACGGGATATCAGTGCCGATATCACCGCAGTCCAAGTGAGGTTGAACAGAGGTTTGCACTTGACTGACGTTGAGCAGAGGGTGACCTTCGACCGGATGCAGGAGAAGATGCGTGCGGTCATGCGCGTCTTCTCCTGTCGCAGCGCCGTGGACGTCGTACCTCCAGCTGGTCCGGTACAACCACGGCCTCGCGCGCCTACCGTCGGAGCAGGACCTCGACCTACGGTACCTGTTTCGCACGGTACTGCTCAGCCCAGAGGTTTCTTAAGTTTTGTTTCTGTTTTTGTACGAAAACATCACCCCGTCGTAACTTGATGTTCCATCCTCGCAGGACCTCGTTTGCCTTCGAGCGCCCCTAGCTTCGGAGCAGTGCGACCTACAGCACCAGTTTCGCACGGTACAGTTCAGCCCAGAGATTAGTTCATTTTTGTTTCAGCTTTTGCACGAATATGTCACCATGTTTTAACGGCACGTTTCCTCATCGCAGGACCTCGTCTGCCTTCGAGCGCGTTCGCAGGCACGACCGGCGCTTCCGCGAGCTCCGCAGGGGCGTTCGCCACCTCTTCGGGCGCGTTCGCCAGCTCTTCCTCTCACGGAGCGTCGATCCCTCGCCCACACGGTACTTTACTTTTTATTAATACTATTAAATACCTGTATGAAACTGATGGTCCTTGTCCTGCAGGATTTGCAGCCGGGATCTTCAGTACTGGGGCCTCTTCGTCTCACGCCGGTAGGACTGGTCCTACTAGCCAGTTCTACGACGACGACTTGCACGGTGCACACCACCACGACGTACTAGGCTCCTCTCAGCTTGGAGGAGCTCCAGAGGCGCACACTCAGGAGCAGCCAGAGGTCACACCTGTACAGGCAGGACGGGTTGGCCGTGCCGTACCCCCGGACTGACTCACGTACTCCCAGGGGCACATTAGGGCGCAGGGTAGGAGGGACAGGGGTAAGAGGCCTCGTCAGTAGTGTTCTACCTCTTCAGTCCTTATGTGACCGTTTCTTTTGGCTTACAAACTTGTAAAGCAGTACTACTTTTGCTATTACTACTGCAGTACTACTTGTGTTTGTCTCGTCTACATAGTTCTTTTCATTCATATGGTGCTAGAACAACTTATGCTCACGACAACACACTTTCGGCGCTTCACGGTAGTGTCAGATCCAGTAGCGCGCACAGTCCACAACAGCACACATGAAAAGCGGCAGCTCGAGTTGTCACTATCAACTTTCGGCGCTGCCTGTTGACATAAAGTGAATCACGCCCACGCGTGATCGTCTTGTCACATCTAATGAATAATGTATCTCATTGAGTTCACATATATTGCAGTGAAAACGACGCTATATAATTGACAATCTGAAGGCAACCTCTTCATATCTTCTTTCCCACTAGCACACAACACACGAAAATGGAAGCGCCATTCCTTGAGCGTCTCAACTGGCGAAGCGATCCTTTTGCTGGTTGGTTTCCACCATGGTGTGACCGTCCTTTGTGCGATTGTGGGGATGGATGCATACTCAAGTCTTCCCTCATGATACAAACTCGGGGCAGGAGATTCTTCCAATGCGCGAACTTTGATCAGGTATGCTTCATCTATTCGAAGTTCAAATGGATAAAAAAACTAACTTCTTCGTACACAATTGTAACATCTTACGCAGACATATCGTCCAATGTGCAACTTCATCGAGTGGGTAGACATGGAGAACCCACAAAACGACGGAACCCGTGCTTACCCACGTAGTGAAACAAGATCGGACTACCTAAGGCGGAAGGATGAGCATGAACGTCGAATTGCTGCTGAGGCTTTAGAATGGCACGTAAATCCCCTAGGACTCCCCACGTGGCGTGAGCGTCCGGAGTGTCGTTGTGGTGACCGTTGTCAGGTCATAAGGTCCGTAAGGCACCGAACTCGAGGACAAAGGTGTTTCGTGTGTCCAAACATTGTCGACGATGATTTCGTGGTAATTACAACTATTCTTTTCATCACTCCTCAGTACTATCATTAACTTAACTATCCCAAAATGAATGTACATAGGAGGATGTAAGGAAATGTCAATTCGTACAATGGATTGACACAGTCAGAGTTACTTCAAGTGGCGGGCCGATAACGCAACCTGAACCGACCATACAGTTCATTCATGCTTGGATGGAGTACGAACGTCGGGTGGAAATTGCAAGCTTAGACTGGAGGAACAATCCATTAGGGTTACCTAAATGGTCCGAGCGTCCAAAGTGTGGGTGCAGAGATCGCTGGCAGGTGGCTACATCCTTTGCTGAACAAACATTTCGAAGGAGATATTTTGTCTGCCCCAATGTAGACAACGATTTCGTTGTATGTCTAACCATTTACAAAATCCGCTATGATTTGCACAAAATTACTACCCAAACTGAATAACATTACTATTTTTACAGGGCAATCCAAGGATGGGTGGATTTACTCGATGGATCGACAATGTCACTCCATCATATCATGGCCAGAAGATAACAGAGTCAGAAACACAAGTAGAGTATCAACGATTGAAGGACCACGAGAATGCAATGCATTCTGACCGACCTAGAAGGAGCCGATAG
More
|
||||||||||
| CDS seq | ATGTCAAATAAGGTCACATTTCAGATAGTTCACGGTGAAGGAAATATTAGATTTGGTCCAGATGGTGTTGATCTGTCAGATTTTGTAATGACATCTAAGGGCATCGATAGGCCTGCGGAGAGAACATTTCAGTCAATTTATAGTTGGTTGTTGAGAGGATTTAGAATAGACCAAGAAGTCTACACAATGTCAGTATCAGTTGTAGTGAGTCGTGCAACAGAAGGTTATTTTTGGGAACTAATGCCGATGGACAGCACTGCTGCTTGGAGACGGTATGTGGAAATGGCTTTTGAACGGTCATGGCCCCTCGTTATATTTGTGTCGGTACAAGAGAAAGATATAAATGTTTCAATGCAAACCGAAGATGTAGAGGGTCCTATCAATGCAGGGGATGTTGTTGGACCATCGATGCAAAATGAGGAAAATCAACCAAGGGAGGAGCAGGCCATGGGCATGGCGGATGAGGGGGAGAGAGTCGGTATAATTGTTGATGAAATGGAGAGGGAAGATTCGGATAATGAGGAAGCGGACGACGACGCATCATCCGATGAGGAAGGTGATGTAATGGCCACTGATTGGGCAAATGAGGACTTCTCTGGACTTGTTATATCAGAGGGTGATCATGTACCCTGGGAGTATAAGGAGAACGAGGTAATTGACGGTGCAAGGTATGCTCATAAGGATGAGATGAAGGAGGCGGTGAAGCATTGGGCAGTTTCCTTGCAGAGAGAGTTTAGGGTGGTCAAGTCAACAAATTATGTGTATGAAGTGAGGTGCATGAAGGAAGATTGTCCGTGGCGTGTCCATGCATATAAGGGTAAATGGAATGATTATTGGAAAGTTAGCATTGTGACCGAGCACAAGTGCTACTTACAAGGGGTGGAGAAGTATCACCGAAACATCACTTCAGCTTTTGTGGCAAGTGAGATGTACAGCAGTGTTGTTGGTAACATTGGCTTTGAACCAAAATCAATTATTAGGCACATCGAGAACAAATTCAAGTACACTATAAGCTATGCAAAGGCCTGGAGAGCCAAACAAAAGATTATTGAGATGAGGTATGGCACATTTGAAGCTTCTTATGATAATTTGCCTCGTTTGTTAGCCACCATTGCCCAGAGGAATAATAATACTTACTATGACCTACATACATTTACATCGGTTGATGATCGAACAAAGAGTGTGCTGCAAAGAGCCTTTTTCTCATTGGGTGCTTGCATCAATGCTTTTGTGCATTGTCGACCTGTTCTATGCATAGATGGAACTTTTATGACAGAGAGTGAGAACACTGAAAGCTGGTACTGGTTCCTAGAGAGAGTGCACATTGCAGTGCAATTCAAGAACAAGCATCTTATGGAGCTCTTTAAGAGGCTATGTGCACAGAGCCAAGAGAAGAAATTTAATGAGTTGTGGGACAAGTTGGATGAGTTGACAATGAAGCAAACAGATGAGCAATCTCGCAGACCACAAGTTGAAGGTGACGAGCCTCCCATACCTCTTGGTGCATTACATGATGACCCACCAACAATGAGAAGGAGGTCAGGGTCGTCCATCAGAAATTTCACTCAGTGGATTGAGAATGAGCGTAAGGAGAAGTGGTCTCTATTATTCGACACCGATAGATCTCGGAGCAGGCGTGGTATCTATCGCAAGCAAGCCGTGCAGGAATGTGTCTTGAAGGCGGATGGTGGATGTACCTGCAGTTGTATGAAGCCGAAGCTTCATCACCTTCCTTGCTCACACGTTCTAGCAGCCACGTACCATGTCCTCTGTGAGGCGTGCACGAAGACAGACGCGGGAGCGATCATCGCTAGCTGCCCTATGTTGCTTCAGCTTTGGGCAGCCGAGAGGTTTGCCATAGGTCGACCAGTGGTGGACAGCGCACCCTACGGGGTTGGTCGCAGCGCGCAGTGGCCAGAGGACGGTCCCACGATGGGGACTTACTGGTGTCGACGTGGGCGTCGTTACGCTCACGTCCAGGTGAGACGAGGTTACCCGGACTTCGTGTTCGAGTTTGACCGTCTCCAGCCGAGCGACGTCATCTGGGAGCCGTACACAGAAGAGGCCGTCGCTGCGAGAGCACCGCTAGGACTTTCGTCGTTGTGCACACGCGACCAGGCTTACTGGCTCACCATCCTGCCGATGGTGTTCGACATTTTCGTTGAGCCTCACTGCCCGCAGCGTGTGATGAGACAGTTCGGACTTAGGCAGGTGTTTCCGGGCAACGTGCAGCCGACCGTCCTCCCTGCCGACCACTCGTTGACTCGACGGGGACAGCTAGCAGGCGCACTTTGGGCTCCACGTGTACAGCAGTACGTTGACGACTGGGTGTTAGCTACAGAGGAGGTGATCAACGAGCTCTTCCCACACACGGAGGAGAACTACCGTGACTACCTTCGCTGGTACCTTCCTCGCACTCGTGCGCGTGTGACCTTCACTCCAGACGCCCCAGAGCCGCACGTTGCCGCTGTGACGGACGCGTATCCCACGCACCGTGACCGAGACTACTTCGTGGGGGCTGATGCCGCACGGGATATCAGTGCCGATATCACCGCAGTCCAAGTGAGGTTGAACAGAGGTTTGCACTTGACTGACGTTGAGCAGAGGGTGACCTTCGACCGGATGCAGGAGAAGATGCGTGCGGTCATGCGCGTCTTCTCCTGTCGCAGCGCCGTGGACGTCGTACCTCCAGCTGGTCCGGACCTCGTTTGCCTTCGAGCGCCCCTAGCTTCGGAGCAGTGCGACCTACAGCACCAGTTTCGCACGGATTTGCAGCCGGGATCTTCAGTACTGGGGCCTCTTCGTCTCACGCCGACATATCGTCCAATGTGCAACTTCATCGAGTGGGTAGACATGGAGAACCCACAAAACGACGGAACCCGTGCTTACCCACGTAGTGAAACAAGATCGGACTACCTAAGGCGGAAGGATGAGCATGAACGTCGAATTGCTGCTGAGGCTTTAGAATGGCACGGCAATCCAAGGATGGGTGGATTTACTCGATGGATCGACAATGTCACTCCATCATATCATGGCCAGAAGATAACAGAGTCAGAAACACAAGTAGAGTATCAACGATTGAAGGACCACGAGAATGCAATGCATTCTGACCGACCTAGAAGGAGCCGATAG
More
|
||||||||||
| Protein seq | MSNKVTFQIVHGEGNIRFGPDGVDLSDFVMTSKGIDRPAERTFQSIYSWLLRGFRIDQEVYTMSVSVVVSRATEGYFWELMPMDSTAAWRRYVEMAFERSWPLVIFVSVQEKDINVSMQTEDVEGPINAGDVVGPSMQNEENQPREEQAMGMADEGERVGIIVDEMEREDSDNEEADDDASSDEEGDVMATDWANEDFSGLVISEGDHVPWEYKENEVIDGARYAHKDEMKEAVKHWAVSLQREFRVVKSTNYVYEVRCMKEDCPWRVHAYKGKWNDYWKVSIVTEHKCYLQGVEKYHRNITSAFVASEMYSSVVGNIGFEPKSIIRHIENKFKYTISYAKAWRAKQKIIEMRYGTFEASYDNLPRLLATIAQRNNNTYYDLHTFTSVDDRTKSVLQRAFFSLGACINAFVHCRPVLCIDGTFMTESENTESWYWFLERVHIAVQFKNKHLMELFKRLCAQSQEKKFNELWDKLDELTMKQTDEQSRRPQVEGDEPPIPLGALHDDPPTMRRRSGSSIRNFTQWIENERKEKWSLLFDTDRSRSRRGIYRKQAVQECVLKADGGCTCSCMKPKLHHLPCSHVLAATYHVLCEACTKTDAGAIIASCPMLLQLWAAERFAIGRPVVDSAPYGVGRSAQWPEDGPTMGTYWCRRGRRYAHVQVRRGYPDFVFEFDRLQPSDVIWEPYTEEAVAARAPLGLSSLCTRDQAYWLTILPMVFDIFVEPHCPQRVMRQFGLRQVFPGNVQPTVLPADHSLTRRGQLAGALWAPRVQQYVDDWVLATEEVINELFPHTEENYRDYLRWYLPRTRARVTFTPDAPEPHVAAVTDAYPTHRDRDYFVGADAARDISADITAVQVRLNRGLHLTDVEQRVTFDRMQEKMRAVMRVFSCRSAVDVVPPAGPDLVCLRAPLASEQCDLQHQFRTDLQPGSSVLGPLRLTPTYRPMCNFIEWVDMENPQNDGTRAYPRSETRSDYLRRKDEHERRIAAEALEWHGNPRMGGFTRWIDNVTPSYHGQKITESETQVEYQRLKDHENAMHSDRPRRSR |
||||||||||
| Function | Serine/threonine-protein phosphatase 7 long form homolog [UniProtKB/Swiss-Prot:Q9LNG5] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os05g40760 | LOC_Os05g40760.1 | Chr05 | 23890638 | 23896522 | + | MSU_osa1r7 | ||
| CDS seq | ATGTCAAATAAGGTCACATTTCAGATAGTTCACGGTGAAGGAAATATTAGATTTGGTCCAGATGGTGTTGATCTGTCAGATTTTGTAATGACATCTAAGGGCATCGATAGGCCTGCGGAGAGAACATTTCAGTCAATTTATAGTTGGTTGTTGAGAGGATTTAGAATAGACCAAGAAGTCTACACAATGTCAGTATCAGTTGTAGTGAGTCGTGCAACAGAAGGTTATTTTTGGGAACTAATGCCGATGGACAGCACTGCTGCTTGGAGACGGTATGTGGAAATGGCTTTTGAACGGTCATGGCCCCTCGTTATATTTGTGTCGGTACAAGAGAAAGATATAAATGTTTCAATGCAAACCGAAGATGTAGAGGGTCCTATCAATGCAGGGGATGTTGTTGGACCATCGATGCAAAATGAGGAAAATCAACCAAGGGAGGAGCAGGCCATGGGCATGGCGGATGAGGGGGAGAGAGTCGGTATAATTGTTGATGAAATGGAGAGGGAAGATTCGGATAATGAGGAAGCGGACGACGACGCATCATCCGATGAGGAAGGTGATGTAATGGCCACTGATTGGGCAAATGAGGACTTCTCTGGACTTGTTATATCAGAGGGTGATCATGTACCCTGGGAGTATAAGGAGAACGAGGTAATTGACGGTGCAAGGTATGCTCATAAGGATGAGATGAAGGAGGCGGTGAAGCATTGGGCAGTTTCCTTGCAGAGAGAGTTTAGGGTGGTCAAGTCAACAAATTATGTGTATGAAGTGAGGTGCATGAAGGAAGATTGTCCGTGGCGTGTCCATGCATATAAGGGTAAATGGAATGATTATTGGAAAGTTAGCATTGTGACCGAGCACAAGTGCTACTTACAAGGGGTGGAGAAGTATCACCGAAACATCACTTCAGCTTTTGTGGCAAGTGAGATGTACAGCAGTGTTGTTGGTAACATTGGCTTTGAACCAAAATCAATTATTAGGCACATCGAGAACAAATTCAAGTACACTATAAGCTATGCAAAGGCCTGGAGAGCCAAACAAAAGATTATTGAGATGAGGTATGGCACATTTGAAGCTTCTTATGATAATTTGCCTCGTTTGTTAGCCACCATTGCCCAGAGGAATAATAATACTTACTATGACCTACATACATTTACATCGGTTGATGATCGAACAAAGAGTGTGCTGCAAAGAGCCTTTTTCTCATTGGGTGCTTGCATCAATGCTTTTGTGCATTGTCGACCTGTTCTATGCATAGATGGAACTTTTATGACAGAGAGTGAGAACACTGAAAGCTGGTACTGGTTCCTAGAGAGAGTGCACATTGCAGTGCAATTCAAGAACAAGCATCTTATGGAGCTCTTTAAGAGGCTATGTGCACAGAGCCAAGAGAAGAAATTTAATGAGTTGTGGGACAAGTTGGATGAGTTGACAATGAAGCAAACAGATGAGCAATCTCGCAGACCACAAGTTGAAGGTGACGAGCCTCCCATACCTCTTGGTGCATTACATGATGACCCACCAACAATGAGAAGGAGGTCAGGGTCGTCCATCAGAAATTTCACTCAGTGGATTGAGAATGAGCGTAAGGAGAAGTGGTCTCTATTATTCGACACCGATAGATCTCGGAGCAGGCGTGGTATCTATCGCAAGCAAGCCGTGCAGGAATGTGTCTTGAAGGCGGATGGTGGATGTACCTGCAGTTGTATGAAGCCGAAGCTTCATCACCTTCCTTGCTCACACGTTCTAGCAGCCACGTACCATGTCCTCTGTGAGGCGTGCACGAAGACAGACGCGGGAGCGATCATCGCTAGCTGCCCTATGTTGCTTCAGCTTTGGGCAGCCGAGAGGTTTGCCATAGGTCGACCAGTGGTGGACAGCGCACCCTACGGGGTTGGTCGCAGCGCGCAGTGGCCAGAGGACGGTCCCACGATGGGGACTTACTGGTGTCGACGTGGGCGTCGTTACGCTCACGTCCAGGTGAGACGAGGTTACCCGGACTTCGTGTTCGAGTTTGACCGTCTCCAGCCGAGCGACGTCATCTGGGAGCCGTACACAGAAGAGGCCGTCGCTGCGAGAGCACCGCTAGGACTTTCGTCGTTGTGCACACGCGACCAGGCTTACTGGCTCACCATCCTGCCGATGGTGTTCGACATTTTCGTTGAGCCTCACTGCCCGCAGCGTGTGATGAGACAGTTCGGACTTAGGCAGGTGTTTCCGGGCAACGTGCAGCCGACCGTCCTCCCTGCCGACCACTCGTTGACTCGACGGGGACAGCTAGCAGGCGCACTTTGGGCTCCACGTGTACAGCAGTACGTTGACGACTGGGTGTTAGCTACAGAGGAGGTGATCAACGAGCTCTTCCCACACACGGAGGAGAACTACCGTGACTACCTTCGCTGGTACCTTCCTCGCACTCGTGCGCGTGTGACCTTCACTCCAGACGCCCCAGAGCCGCACGTTGCCGCTGTGACGGACGCGTATCCCACGCACCGTGACCGAGACTACTTCGTGGGGGCTGATGCCGCACGGGATATCAGTGCCGATATCACCGCAGTCCAAGTGAGGTTGAACAGAGGTTTGCACTTGACTGACGTTGAGCAGAGGGTGACCTTCGACCGGATGCAGGAGAAGATGCGTGCGGTCATGCGCGTCTTCTCCTGTCGCAGCGCCGTGGACGTCGTACCTCCAGCTGGTCCGGACCTCGTTTGCCTTCGAGCGCCCCTAGCTTCGGAGCAGTGCGACCTACAGCACCAGTTTCGCACGGATTTGCAGCCGGGATCTTCAGTACTGGGGCCTCTTCGTCTCACGCCGACATATCGTCCAATGTGCAACTTCATCGAGTGGGTAGACATGGAGAACCCACAAAACGACGGAACCCGTGCTTACCCACGTAGTGAAACAAGATCGGACTACCTAAGGCGGAAGGATGAGCATGAACGTCGAATTGCTGCTGAGGCTTTAGAATGGCACGGCAATCCAAGGATGGGTGGATTTACTCGATGGATCGACAATGTCACTCCATCATATCATGGCCAGAAGATAACAGAGTCAGAAACACAAGTAGAGTATCAACGATTGAAGGACCACGAGAATGCAATGCATTCTGACCGACCTAGAAGGAGCCGATAG
More
|
|||||||
| Protein seq | MSNKVTFQIVHGEGNIRFGPDGVDLSDFVMTSKGIDRPAERTFQSIYSWLLRGFRIDQEVYTMSVSVVVSRATEGYFWELMPMDSTAAWRRYVEMAFERSWPLVIFVSVQEKDINVSMQTEDVEGPINAGDVVGPSMQNEENQPREEQAMGMADEGERVGIIVDEMEREDSDNEEADDDASSDEEGDVMATDWANEDFSGLVISEGDHVPWEYKENEVIDGARYAHKDEMKEAVKHWAVSLQREFRVVKSTNYVYEVRCMKEDCPWRVHAYKGKWNDYWKVSIVTEHKCYLQGVEKYHRNITSAFVASEMYSSVVGNIGFEPKSIIRHIENKFKYTISYAKAWRAKQKIIEMRYGTFEASYDNLPRLLATIAQRNNNTYYDLHTFTSVDDRTKSVLQRAFFSLGACINAFVHCRPVLCIDGTFMTESENTESWYWFLERVHIAVQFKNKHLMELFKRLCAQSQEKKFNELWDKLDELTMKQTDEQSRRPQVEGDEPPIPLGALHDDPPTMRRRSGSSIRNFTQWIENERKEKWSLLFDTDRSRSRRGIYRKQAVQECVLKADGGCTCSCMKPKLHHLPCSHVLAATYHVLCEACTKTDAGAIIASCPMLLQLWAAERFAIGRPVVDSAPYGVGRSAQWPEDGPTMGTYWCRRGRRYAHVQVRRGYPDFVFEFDRLQPSDVIWEPYTEEAVAARAPLGLSSLCTRDQAYWLTILPMVFDIFVEPHCPQRVMRQFGLRQVFPGNVQPTVLPADHSLTRRGQLAGALWAPRVQQYVDDWVLATEEVINELFPHTEENYRDYLRWYLPRTRARVTFTPDAPEPHVAAVTDAYPTHRDRDYFVGADAARDISADITAVQVRLNRGLHLTDVEQRVTFDRMQEKMRAVMRVFSCRSAVDVVPPAGPDLVCLRAPLASEQCDLQHQFRTDLQPGSSVLGPLRLTPTYRPMCNFIEWVDMENPQNDGTRAYPRSETRSDYLRRKDEHERRIAAEALEWHGNPRMGGFTRWIDNVTPSYHGQKITESETQVEYQRLKDHENAMHSDRPRRSR
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g59540 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_05g0015460 | SBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_05g0015450 | SBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_05G0458300 | SBH | 0.005497 | 0.0061255 | 0.0009765 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_05g0015070 | SBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_05G0471600 | SBH | 0 | 0.0143245 | 0.0187785 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_05g0015280 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_05g0015310 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_05g0015320 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_05g0015440 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_05G014940 | SBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_05g0015250 | SBH | 0.0 | 0.0 | 0.0 |
