Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os05g40050 | OGI:05063900 | 16/16 | Nipponbare | IRGSP 1.0 | MSU | Chr05:23524087-23527698 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ATGGCCACCGCCACCGCCGCCCTCCTCCTCCTCACGCTCGCCGCCATCCTCGCCGCGGCGGGCGCCGTGAACGACGACGTGCTCGCGCTGGTGGTCTTCAAGTCCGGGGTGTCCGACCCGGGGGGCGTCCTGGCGGCGTGGTCGGAGGACGCCGACCGCGCCTGCGCCTGGCCCGGGGTGTCGTGCGACGCGCGGGCGGGGCGCGTCGACGCCGTCGCGCTCCCGTCCGCGGGGCTCTCCGGCCGCCTCCCGCGGTCCGCGCTGCTCCGCCTCGACGCGCTCCTCTCCCTCGCGCTCCCCGGGAACAACCTCTCCGGCCCGCTCCCCGACGCGCTGCCCCCGCGCGCCCGCGCGCTCGACCTCTCCGCCAACTCGCTCTCAGGCTACCTCCCCGCCGCGCTCGCCTCCTGCGGCTCCCTCGTGTCGCTCAACCTCTCCGGGAACCTCCTCTCGGGCCCCGTCCCCGATGGCATCTGGTCTCTCCCGTCGCTCCGGTCGCTGGACCTCTCCGGCAACCAGCTCGCCGGAAGCGTGCCCGGGGGATTCCCACGGAGCAGCTCGTTGCGCGTGCTGGATTTGAGTCGCAACCTTCTCGAAGGGGAGATTCCGGCGGACGTCGGAGAGGCCGGGCTGCTCAAATCGTTGGATGTCGGGCACAACTTGTTCACCGGCGAGCTGCCGGAGTCGCTGCGTGGGCTCACCGGGCTGAGCTCTCTTGGAGCGGGCGGGAATGCGCTCGCCGGCGAGCTCCCGGGGTGGATTGGTGAGATGGCGGCGCTGGAGACGCTAGATTTGTCCGGCAACCGCTTCGTCGGCGCCATCCCAGACGGCATTTCGGGCTGCAAGAACCTGGTCGAGGTCGACCTCAGCGGCAACGCGCTCACCGGGGAGCTCCCGTGGTGGGTGTTCGGCCTGGCAGCGCTGCAGCGCGTCTCCCTCGCCGGCAACGCGCTTTCCGGCTGGATCAAAGCTCCCGGTGACAATGCCTCAGCGCTGCAAGAACTGGACCTGTCGGGCAATGCCTTCTCCGGCGTGATCCCGCGCGAGATCGCGAGCCTTTCAAGGTTGCAGCATCTGAACCTGTCCTCAAACACCATGTCGGGGAAGCTTCCGGTGAGCATTGGACGGATGGCATTGTTGGAGGTGATGGATGTTAGCAGAAACCAGCTGAGCGGGGGCGTCCCACCGGAGATCGGCGGTGCGGCGGCGCTCCGGAAGTTGCTGATGGGGAGTAATTCACTCACCGGAATCATTCCGCCGCAGATTGGGAATTGCAGAAACCTGATTGCATTGTAAGTGATCTCTTTTTTTTTTTTCCAACATAACTTGGTGGCTTGCTGTTACACTAGCAGTAGCTTCTACTTTGTTTTTTCTTGTGTTAGCAGCTAGCACTTGCCTGCTCTCTGGTTCCTAGTTTCAGATGCCATGGAGAAAGTGATGTCTATGTCTTATTTTCTGTTTGGAAGCACTAAGCCAGCAATGTCGGAACCATGCCTGTCCTGTTGCTTTGGTCGTATCCTAGTGTCTGTGTCCTTGCTTTTTCTTGGATACACTAAAAAAACACAAGTCAAATTACATAAGAAATTTGAATGCTTCTTAAAGAACATATAAATTACAATGAACAAGGCAAATCATGTTGCATCATTACTATCAAAATCTTGGCACTATTTCAGCTGATGTGTGTATGGCTCTTTTGTGGCATTGCAGGGATCTATCACATAACAAGCTTACAGGGCCTATTCCTGCGACCATAGGCAACCTCACCGGTCTCCAAATGGTCGATTTCTCGGAGAACAAGCTGAATGGAACCCTGCCAGTGGAGCTCTCTAAACTCGCAAACCTTCGAGTCTTCAATGTCTCCCACAATCTACTATCAGGAAACCTCCCCATCAGTCACTTTTTTGATACTATCCCTGATTCTTTCATCTTGGACAATGCTGGACTTTGCAGCTCACAGAGAGATAATTCCTGCAGCGGCGTCATGCCAAAGCCAATTGTATTTAACCCTAATGCCTCATCAGATCCCCTCTCAGAGGCTTCCCCAGGTGCCCCCAGCAGCCAGCACCACAAGAAGATCATATTGAGCATCTCAACACTGATTGCCATTGTGGGTGGAGCGTTGATTATTGTTGGCGTGGTAACTATCACAGTGCTCAACCGTCGTGTCCGCTCTGCGGCCTCCCACTCTGCAGTTCCCACTGCACTATCAGATGATTATGATAGCCAATCCCCAGAGAATGAAGCCAACCCTGGCAAGCTTGTCATGTTTGGCAGGGGCAGCCCAGATTTCAGTGCAGGTGGGCATGCTTTGCTGAATAAGGATTGCGAACTTGGGCGAGGAGGCTTTGGCACAGTCTACAAGGCAGTTTTAAGAGATGGCCAGCCTGTGGCCATCAAGAAGCTGACAGTGTCAAGCTTGGTCAAGTCAGAGGACGAGTTCAAACGGCAGGTTAAGCTTCTTGGAAAGGTGCGGCACCATAATGTTGTTACCCTCAGAGGCTTCTACTGGACTTCATCACTGCAGCTCCTCATCTATGACTTTGTGCCTGGCGGTAACTTATATCAGCACCTGCATGAGTCCTCAGCAGAGAGATCGGTTTCATGGATGGAAAGGTTTGACATAATAATCGGCGTAGCCCGAGCCCTTGCGCACTTGCACCGCCATGGGATAATCCACTATAATCTGAAGTCAAGCAATGTCTTGCTAGATAGCAACGGCGAGCCAAGGGTTGGTGACTATGGCCTTGTGAAGCTGCTGCCTATGCTGGATCGCTACGTGCTGAGCAGCAAGATTCAGAGCGCGCTAGGGTACATGGCGCCGGAGTTCACATGCAGGACAGTCAATGTCACAGAGAAGTGCGACGTCTATGGTTTCGGGGTGATAGTTCTTGAGATCTTGACAGGCAGGAGACCAGTCGAGTACCTAGAAGACGATGTCGTCGTGCTCTGCGATGTGGTGAGAGCTGCACTCGACGATGGCAGGGTGGAGGACTGCATGGATCCACGGCTATCAGGTGAGTTCTCCATGGAAGAGGCTATGCTGATCATCAAGCTGGGCCTTGTTTGCACGTCTCAGGTGCCCTCCCACCGGCCGGACATGGGTGAGGTAGTCAGCATGCTTGAGATGGTGAGGAGTTCTCAGGGTACCCCAGAGGATGATCTGGTTTGAAATCTATTTTTTGGTTCCATTTCTCTTTCCCTTTATTAGTTCCTTTTTTTGTCTTTGATAGATGGGATGATTGCAAAGACCAAAGAATGTGAGGAGATGGCTAGTGATTTAGCCTGCTTGCAATTTTTCAGGGATGTGAAGCCGTTGCTTCGGATCAGTTCTTGGTCCCTTTTCTAGAATCATCACATGAGTGTCAATTCGAAATGAGGCTGATAGCATAATAGCAACCCGGTTCCATTCATGTTTTTGTTGTCAGTTAAGTTTGGCTAATACTTGGGTCTTTTGAAGAATTGAAGTTCTGTTACTTTGTTGCTGTCTTCGCCTTGAGACCACAACTTCTCCCAGAAAGCAAGCCGAAGTTAAAGGCTTCCTGGGCCAAGTTGTCGTACAGGTGACACAGCCCATACGGCCCTACTCGAATGATCATGTGCTCATTCAGGCCT
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| CDS seq | ATGGCCACCGCCACCGCCGCCCTCCTCCTCCTCACGCTCGCCGCCATCCTCGCCGCGGCGGGCGCCGTGAACGACGACGTGCTCGCGCTGGTGGTCTTCAAGTCCGGGGTGTCCGACCCGGGGGGCGTCCTGGCGGCGTGGTCGGAGGACGCCGACCGCGCCTGCGCCTGGCCCGGGGTGTCGTGCGACGCGCGGGCGGGGCGCGTCGACGCCGTCGCGCTCCCGTCCGCGGGGCTCTCCGGCCGCCTCCCGCGGTCCGCGCTGCTCCGCCTCGACGCGCTCCTCTCCCTCGCGCTCCCCGGGAACAACCTCTCCGGCCCGCTCCCCGACGCGCTGCCCCCGCGCGCCCGCGCGCTCGACCTCTCCGCCAACTCGCTCTCAGGCTACCTCCCCGCCGCGCTCGCCTCCTGCGGCTCCCTCGTGTCGCTCAACCTCTCCGGGAACCTCCTCTCGGGCCCCGTCCCCGATGGCATCTGGTCTCTCCCGTCGCTCCGGTCGCTGGACCTCTCCGGCAACCAGCTCGCCGGAAGCGTGCCCGGGGGATTCCCACGGAGCAGCTCGTTGCGCGTGCTGGATTTGAGTCGCAACCTTCTCGAAGGGGAGATTCCGGCGGACGTCGGAGAGGCCGGGCTGCTCAAATCGTTGGATGTCGGGCACAACTTGTTCACCGGCGAGCTGCCGGAGTCGCTGCGTGGGCTCACCGGGCTGAGCTCTCTTGGAGCGGGCGGGAATGCGCTCGCCGGCGAGCTCCCGGGGTGGATTGGTGAGATGGCGGCGCTGGAGACGCTAGATTTGTCCGGCAACCGCTTCGTCGGCGCCATCCCAGACGGCATTTCGGGCTGCAAGAACCTGGTCGAGGTCGACCTCAGCGGCAACGCGCTCACCGGGGAGCTCCCGTGGTGGGTGTTCGGCCTGGCAGCGCTGCAGCGCGTCTCCCTCGCCGGCAACGCGCTTTCCGGCTGGATCAAAGCTCCCGGTGACAATGCCTCAGCGCTGCAAGAACTGGACCTGTCGGGCAATGCCTTCTCCGGCGTGATCCCGCGCGAGATCGCGAGCCTTTCAAGGTTGCAGCATCTGAACCTGTCCTCAAACACCATGTCGGGGAAGCTTCCGGTGAGCATTGGACGGATGGCATTGTTGGAGGTGATGGATGTTAGCAGAAACCAGCTGAGCGGGGGCGTCCCACCGGAGATCGGCGGTGCGGCGGCGCTCCGGAAGTTGCTGATGGGGAGTAATTCACTCACCGGAATCATTCCGCCGCAGATTGGGAATTGCAGAAACCTGATTGCATTGGATCTATCACATAACAAGCTTACAGGGCCTATTCCTGCGACCATAGGCAACCTCACCGGTCTCCAAATGGTCGATTTCTCGGAGAACAAGCTGAATGGAACCCTGCCAGTGGAGCTCTCTAAACTCGCAAACCTTCGAGTCTTCAATGTCTCCCACAATCTACTATCAGGAAACCTCCCCATCAGTCACTTTTTTGATACTATCCCTGATTCTTTCATCTTGGACAATGCTGGACTTTGCAGCTCACAGAGAGATAATTCCTGCAGCGGCGTCATGCCAAAGCCAATTGTATTTAACCCTAATGCCTCATCAGATCCCCTCTCAGAGGCTTCCCCAGGTGCCCCCAGCAGCCAGCACCACAAGAAGATCATATTGAGCATCTCAACACTGATTGCCATTGTGGGTGGAGCGTTGATTATTGTTGGCGTGGTAACTATCACAGTGCTCAACCGTCGTGTCCGCTCTGCGGCCTCCCACTCTGCAGTTCCCACTGCACTATCAGATGATTATGATAGCCAATCCCCAGAGAATGAAGCCAACCCTGGCAAGCTTGTCATGTTTGGCAGGGGCAGCCCAGATTTCAGTGCAGGTGGGCATGCTTTGCTGAATAAGGATTGCGAACTTGGGCGAGGAGGCTTTGGCACAGTCTACAAGGCAGTTTTAAGAGATGGCCAGCCTGTGGCCATCAAGAAGCTGACAGTGTCAAGCTTGGTCAAGTCAGAGGACGAGTTCAAACGGCAGGTTAAGCTTCTTGGAAAGGTGCGGCACCATAATGTTGTTACCCTCAGAGGCTTCTACTGGACTTCATCACTGCAGCTCCTCATCTATGACTTTGTGCCTGGCGGTAACTTATATCAGCACCTGCATGAGTCCTCAGCAGAGAGATCGGTTTCATGGATGGAAAGGTTTGACATAATAATCGGCGTAGCCCGAGCCCTTGCGCACTTGCACCGCCATGGGATAATCCACTATAATCTGAAGTCAAGCAATGTCTTGCTAGATAGCAACGGCGAGCCAAGGGTTGGTGACTATGGCCTTGTGAAGCTGCTGCCTATGCTGGATCGCTACGTGCTGAGCAGCAAGATTCAGAGCGCGCTAGGGTACATGGCGCCGGAGTTCACATGCAGGACAGTCAATGTCACAGAGAAGTGCGACGTCTATGGTTTCGGGGTGATAGTTCTTGAGATCTTGACAGGCAGGAGACCAGTCGAGTACCTAGAAGACGATGTCGTCGTGCTCTGCGATGTGGTGAGAGCTGCACTCGACGATGGCAGGGTGGAGGACTGCATGGATCCACGGCTATCAGGTGAGTTCTCCATGGAAGAGGCTATGCTGATCATCAAGCTGGGCCTTGTTTGCACGTCTCAGGTGCCCTCCCACCGGCCGGACATGGGTGAGGTAGTCAGCATGCTTGAGATGGTGAGGAGTTCTCAGGGTACCCCAGAGGATGATCTGGTTTGA
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| Protein seq | MATATAALLLLTLAAILAAAGAVNDDVLALVVFKSGVSDPGGVLAAWSEDADRACAWPGVSCDARAGRVDAVALPSAGLSGRLPRSALLRLDALLSLALPGNNLSGPLPDALPPRARALDLSANSLSGYLPAALASCGSLVSLNLSGNLLSGPVPDGIWSLPSLRSLDLSGNQLAGSVPGGFPRSSSLRVLDLSRNLLEGEIPADVGEAGLLKSLDVGHNLFTGELPESLRGLTGLSSLGAGGNALAGELPGWIGEMAALETLDLSGNRFVGAIPDGISGCKNLVEVDLSGNALTGELPWWVFGLAALQRVSLAGNALSGWIKAPGDNASALQELDLSGNAFSGVIPREIASLSRLQHLNLSSNTMSGKLPVSIGRMALLEVMDVSRNQLSGGVPPEIGGAAALRKLLMGSNSLTGIIPPQIGNCRNLIALDLSHNKLTGPIPATIGNLTGLQMVDFSENKLNGTLPVELSKLANLRVFNVSHNLLSGNLPISHFFDTIPDSFILDNAGLCSSQRDNSCSGVMPKPIVFNPNASSDPLSEASPGAPSSQHHKKIILSISTLIAIVGGALIIVGVVTITVLNRRVRSAASHSAVPTALSDDYDSQSPENEANPGKLVMFGRGSPDFSAGGHALLNKDCELGRGGFGTVYKAVLRDGQPVAIKKLTVSSLVKSEDEFKRQVKLLGKVRHHNVVTLRGFYWTSSLQLLIYDFVPGGNLYQHLHESSAERSVSWMERFDIIIGVARALAHLHRHGIIHYNLKSSNVLLDSNGEPRVGDYGLVKLLPMLDRYVLSSKIQSALGYMAPEFTCRTVNVTEKCDVYGFGVIVLEILTGRRPVEYLEDDVVVLCDVVRAALDDGRVEDCMDPRLSGEFSMEEAMLIIKLGLVCTSQVPSHRPDMGEVVSMLEMVRSSQGTPEDDLV |
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| Function | Probable LRR receptor-like serine/threonine-protein kinase IRK [UniProtKB/Swiss-Prot:Q9LY03] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os05g40050 | LOC_Os05g40050.1 | Chr05 | 23524087 | 23527545 | + | MSU_osa1r7 | ||
| CDS seq | ATGGCCACCGCCACCGCCGCCCTCCTCCTCCTCACGCTCGCCGCCATCCTCGCCGCGGCGGGCGCCGTGAACGACGACGTGCTCGCGCTGGTGGTCTTCAAGTCCGGGGTGTCCGACCCGGGGGGCGTCCTGGCGGCGTGGTCGGAGGACGCCGACCGCGCCTGCGCCTGGCCCGGGGTGTCGTGCGACGCGCGGGCGGGGCGCGTCGACGCCGTCGCGCTCCCGTCCGCGGGGCTCTCCGGCCGCCTCCCGCGGTCCGCGCTGCTCCGCCTCGACGCGCTCCTCTCCCTCGCGCTCCCCGGGAACAACCTCTCCGGCCCGCTCCCCGACGCGCTGCCCCCGCGCGCCCGCGCGCTCGACCTCTCCGCCAACTCGCTCTCAGGCTACCTCCCCGCCGCGCTCGCCTCCTGCGGCTCCCTCGTGTCGCTCAACCTCTCCGGGAACCTCCTCTCGGGCCCCGTCCCCGATGGCATCTGGTCTCTCCCGTCGCTCCGGTCGCTGGACCTCTCCGGCAACCAGCTCGCCGGAAGCGTGCCCGGGGGATTCCCACGGAGCAGCTCGTTGCGCGTGCTGGATTTGAGTCGCAACCTTCTCGAAGGGGAGATTCCGGCGGACGTCGGAGAGGCCGGGCTGCTCAAATCGTTGGATGTCGGGCACAACTTGTTCACCGGCGAGCTGCCGGAGTCGCTGCGTGGGCTCACCGGGCTGAGCTCTCTTGGAGCGGGCGGGAATGCGCTCGCCGGCGAGCTCCCGGGGTGGATTGGTGAGATGGCGGCGCTGGAGACGCTAGATTTGTCCGGCAACCGCTTCGTCGGCGCCATCCCAGACGGCATTTCGGGCTGCAAGAACCTGGTCGAGGTCGACCTCAGCGGCAACGCGCTCACCGGGGAGCTCCCGTGGTGGGTGTTCGGCCTGGCAGCGCTGCAGCGCGTCTCCCTCGCCGGCAACGCGCTTTCCGGCTGGATCAAAGCTCCCGGTGACAATGCCTCAGCGCTGCAAGAACTGGACCTGTCGGGCAATGCCTTCTCCGGCGTGATCCCGCGCGAGATCGCGAGCCTTTCAAGGTTGCAGCATCTGAACCTGTCCTCAAACACCATGTCGGGGAAGCTTCCGGTGAGCATTGGACGGATGGCATTGTTGGAGGTGATGGATGTTAGCAGAAACCAGCTGAGCGGGGGCGTCCCACCGGAGATCGGCGGTGCGGCGGCGCTCCGGAAGTTGCTGATGGGGAGTAATTCACTCACCGGAATCATTCCGCCGCAGATTGGGAATTGCAGAAACCTGATTGCATTGGATCTATCACATAACAAGCTTACAGGGCCTATTCCTGCGACCATAGGCAACCTCACCGGTCTCCAAATGGTCGATTTCTCGGAGAACAAGCTGAATGGAACCCTGCCAGTGGAGCTCTCTAAACTCGCAAACCTTCGAGTCTTCAATGTCTCCCACAATCTACTATCAGGAAACCTCCCCATCAGTCACTTTTTTGATACTATCCCTGATTCTTTCATCTTGGACAATGCTGGACTTTGCAGCTCACAGAGAGATAATTCCTGCAGCGGCGTCATGCCAAAGCCAATTGTATTTAACCCTAATGCCTCATCAGATCCCCTCTCAGAGGCTTCCCCAGGTGCCCCCAGCAGCCAGCACCACAAGAAGATCATATTGAGCATCTCAACACTGATTGCCATTGTGGGTGGAGCGTTGATTATTGTTGGCGTGGTAACTATCACAGTGCTCAACCGTCGTGTCCGCTCTGCGGCCTCCCACTCTGCAGTTCCCACTGCACTATCAGATGATTATGATAGCCAATCCCCAGAGAATGAAGCCAACCCTGGCAAGCTTGTCATGTTTGGCAGGGGCAGCCCAGATTTCAGTGCAGGTGGGCATGCTTTGCTGAATAAGGATTGCGAACTTGGGCGAGGAGGCTTTGGCACAGTCTACAAGGCAGTTTTAAGAGATGGCCAGCCTGTGGCCATCAAGAAGCTGACAGTGTCAAGCTTGGTCAAGTCAGAGGACGAGTTCAAACGGCAGGTTAAGCTTCTTGGAAAGGTGCGGCACCATAATGTTGTTACCCTCAGAGGCTTCTACTGGACTTCATCACTGCAGCTCCTCATCTATGACTTTGTGCCTGGCGGTAACTTATATCAGCACCTGCATGAGTCCTCAGCAGAGAGATCGGTTTCATGGATGGAAAGGTTTGACATAATAATCGGCGTAGCCCGAGCCCTTGCGCACTTGCACCGCCATGGGATAATCCACTATAATCTGAAGTCAAGCAATGTCTTGCTAGATAGCAACGGCGAGCCAAGGGTTGGTGACTATGGCCTTGTGAAGCTGCTGCCTATGCTGGATCGCTACGTGCTGAGCAGCAAGATTCAGAGCGCGCTAGGGTACATGGCGCCGGAGTTCACATGCAGGACAGTCAATGTCACAGAGAAGTGCGACGTCTATGGTTTCGGGGTGATAGTTCTTGAGATCTTGACAGGCAGGAGACCAGTCGAGTACCTAGAAGACGATGTCGTCGTGCTCTGCGATGTGGTGAGAGCTGCACTCGACGATGGCAGGGTGGAGGACTGCATGGATCCACGGCTATCAGGTGAGTTCTCCATGGAAGAGGCTATGCTGATCATCAAGCTGGGCCTTGTTTGCACGTCTCAGGTGCCCTCCCACCGGCCGGACATGGGTGAGGTAGTCAGCATGCTTGAGATGGTGAGGAGTTCTCAGGGTACCCCAGAGGATGATCTGGTTTGA
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| Protein seq | MATATAALLLLTLAAILAAAGAVNDDVLALVVFKSGVSDPGGVLAAWSEDADRACAWPGVSCDARAGRVDAVALPSAGLSGRLPRSALLRLDALLSLALPGNNLSGPLPDALPPRARALDLSANSLSGYLPAALASCGSLVSLNLSGNLLSGPVPDGIWSLPSLRSLDLSGNQLAGSVPGGFPRSSSLRVLDLSRNLLEGEIPADVGEAGLLKSLDVGHNLFTGELPESLRGLTGLSSLGAGGNALAGELPGWIGEMAALETLDLSGNRFVGAIPDGISGCKNLVEVDLSGNALTGELPWWVFGLAALQRVSLAGNALSGWIKAPGDNASALQELDLSGNAFSGVIPREIASLSRLQHLNLSSNTMSGKLPVSIGRMALLEVMDVSRNQLSGGVPPEIGGAAALRKLLMGSNSLTGIIPPQIGNCRNLIALDLSHNKLTGPIPATIGNLTGLQMVDFSENKLNGTLPVELSKLANLRVFNVSHNLLSGNLPISHFFDTIPDSFILDNAGLCSSQRDNSCSGVMPKPIVFNPNASSDPLSEASPGAPSSQHHKKIILSISTLIAIVGGALIIVGVVTITVLNRRVRSAASHSAVPTALSDDYDSQSPENEANPGKLVMFGRGSPDFSAGGHALLNKDCELGRGGFGTVYKAVLRDGQPVAIKKLTVSSLVKSEDEFKRQVKLLGKVRHHNVVTLRGFYWTSSLQLLIYDFVPGGNLYQHLHESSAERSVSWMERFDIIIGVARALAHLHRHGIIHYNLKSSNVLLDSNGEPRVGDYGLVKLLPMLDRYVLSSKIQSALGYMAPEFTCRTVNVTEKCDVYGFGVIVLEILTGRRPVEYLEDDVVVLCDVVRAALDDGRVEDCMDPRLSGEFSMEEAMLIIKLGLVCTSQVPSHRPDMGEVVSMLEMVRSSQGTPEDDLV
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os05g40050 | LOC_Os05g40050.2 | Chr05 | 23524087 | 23527698 | + | MSU_osa1r7 | ||
| CDS seq | ATGGCCACCGCCACCGCCGCCCTCCTCCTCCTCACGCTCGCCGCCATCCTCGCCGCGGCGGGCGCCGTGAACGACGACGTGCTCGCGCTGGTGGTCTTCAAGTCCGGGGTGTCCGACCCGGGGGGCGTCCTGGCGGCGTGGTCGGAGGACGCCGACCGCGCCTGCGCCTGGCCCGGGGTGTCGTGCGACGCGCGGGCGGGGCGCGTCGACGCCGTCGCGCTCCCGTCCGCGGGGCTCTCCGGCCGCCTCCCGCGGTCCGCGCTGCTCCGCCTCGACGCGCTCCTCTCCCTCGCGCTCCCCGGGAACAACCTCTCCGGCCCGCTCCCCGACGCGCTGCCCCCGCGCGCCCGCGCGCTCGACCTCTCCGCCAACTCGCTCTCAGGCTACCTCCCCGCCGCGCTCGCCTCCTGCGGCTCCCTCGTGTCGCTCAACCTCTCCGGGAACCTCCTCTCGGGCCCCGTCCCCGATGGCATCTGGTCTCTCCCGTCGCTCCGGTCGCTGGACCTCTCCGGCAACCAGCTCGCCGGAAGCGTGCCCGGGGGATTCCCACGGAGCAGCTCGTTGCGCGTGCTGGATTTGAGTCGCAACCTTCTCGAAGGGGAGATTCCGGCGGACGTCGGAGAGGCCGGGCTGCTCAAATCGTTGGATGTCGGGCACAACTTGTTCACCGGCGAGCTGCCGGAGTCGCTGCGTGGGCTCACCGGGCTGAGCTCTCTTGGAGCGGGCGGGAATGCGCTCGCCGGCGAGCTCCCGGGGTGGATTGGTGAGATGGCGGCGCTGGAGACGCTAGATTTGTCCGGCAACCGCTTCGTCGGCGCCATCCCAGACGGCATTTCGGGCTGCAAGAACCTGGTCGAGGTCGACCTCAGCGGCAACGCGCTCACCGGGGAGCTCCCGTGGTGGGTGTTCGGCCTGGCAGCGCTGCAGCGCGTCTCCCTCGCCGGCAACGCGCTTTCCGGCTGGATCAAAGCTCCCGGTGACAATGCCTCAGCGCTGCAAGAACTGGACCTGTCGGGCAATGCCTTCTCCGGCGTGATCCCGCGCGAGATCGCGAGCCTTTCAAGGTTGCAGCATCTGAACCTGTCCTCAAACACCATGTCGGGGAAGCTTCCGGTGAGCATTGGACGGATGGCATTGTTGGAGGTGATGGATGTTAGCAGAAACCAGCTGAGCGGGGGCGTCCCACCGGAGATCGGCGGTGCGGCGGCGCTCCGGAAGTTGCTGATGGGGAGTAATTCACTCACCGGAATCATTCCGCCGCAGATTGGGAATTGCAGAAACCTGATTGCATTGGATCTATCACATAACAAGCTTACAGGGCCTATTCCTGCGACCATAGGCAACCTCACCGGTCTCCAAATGGTCGATTTCTCGGAGAACAAGCTGAATGGAACCCTGCCAGTGGAGCTCTCTAAACTCGCAAACCTTCGAGTCTTCAATGTCTCCCACAATCTACTATCAGGAAACCTCCCCATCAGTCACTTTTTTGATACTATCCCTGATTCTTTCATCTTGGACAATGCTGGACTTTGCAGCTCACAGAGAGATAATTCCTGCAGCGGCGTCATGCCAAAGCCAATTGTATTTAACCCTAATGCCTCATCAGATCCCCTCTCAGAGGCTTCCCCAGGTGCCCCCAGCAGCCAGCACCACAAGAAGATCATATTGAGCATCTCAACACTGATTGCCATTGTGGGTGGAGCGTTGATTATTGTTGGCGTGGTAACTATCACAGTGCTCAACCGTCGTGTCCGCTCTGCGGCCTCCCACTCTGCAGTTCCCACTGCACTATCAGATGATTATGATAGCCAATCCCCAGAGAATGAAGCCAACCCTGGCAAGCTTGTCATGTTTGGCAGGGGCAGCCCAGATTTCAGTGCAGGTGGGCATGCTTTGCTGAATAAGGATTGCGAACTTGGGCGAGGAGGCTTTGGCACAGTCTACAAGGCAGTTTTAAGAGATGGCCAGCCTGTGGCCATCAAGAAGCTGACAGTGTCAAGCTTGGTCAAGTCAGAGGACGAGTTCAAACGGCAGGTTAAGCTTCTTGGAAAGGTGCGGCACCATAATGTTGTTACCCTCAGAGGCTTCTACTGGACTTCATCACTGCAGCTCCTCATCTATGACTTTGTGCCTGGCGGTAACTTATATCAGCACCTGCATGAGTCCTCAGCAGAGAGATCGGTTTCATGGATGGAAAGGTTTGACATAATAATCGGCGTAGCCCGAGCCCTTGCGCACTTGCACCGCCATGGGATAATCCACTATAATCTGAAGTCAAGCAATGTCTTGCTAGATAGCAACGGCGAGCCAAGGGTTGGTGACTATGGCCTTGTGAAGCTGCTGCCTATGCTGGATCGCTACGTGCTGAGCAGCAAGATTCAGAGCGCGCTAGGGTACATGGCGCCGGAGTTCACATGCAGGACAGTCAATGTCACAGAGAAGTGCGACGTCTATGGTTTCGGGGTGATAGTTCTTGAGATCTTGACAGGCAGGAGACCAGTCGAGTACCTAGAAGACGATGTCGTCGTGCTCTGCGATGTGGTGAGAGCTGCACTCGACGATGGCAGGGTGGAGGACTGCATGGATCCACGGCTATCAGGTGAGTTCTCCATGGAAGAGGCTATGCTGATCATCAAGCTGGGCCTTGTTTGCACGTCTCAGGTGCCCTCCCACCGGCCGGACATGGGTGAGGTAGTCAGCATGCTTGAGATGATGGGATGA
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| Protein seq | MATATAALLLLTLAAILAAAGAVNDDVLALVVFKSGVSDPGGVLAAWSEDADRACAWPGVSCDARAGRVDAVALPSAGLSGRLPRSALLRLDALLSLALPGNNLSGPLPDALPPRARALDLSANSLSGYLPAALASCGSLVSLNLSGNLLSGPVPDGIWSLPSLRSLDLSGNQLAGSVPGGFPRSSSLRVLDLSRNLLEGEIPADVGEAGLLKSLDVGHNLFTGELPESLRGLTGLSSLGAGGNALAGELPGWIGEMAALETLDLSGNRFVGAIPDGISGCKNLVEVDLSGNALTGELPWWVFGLAALQRVSLAGNALSGWIKAPGDNASALQELDLSGNAFSGVIPREIASLSRLQHLNLSSNTMSGKLPVSIGRMALLEVMDVSRNQLSGGVPPEIGGAAALRKLLMGSNSLTGIIPPQIGNCRNLIALDLSHNKLTGPIPATIGNLTGLQMVDFSENKLNGTLPVELSKLANLRVFNVSHNLLSGNLPISHFFDTIPDSFILDNAGLCSSQRDNSCSGVMPKPIVFNPNASSDPLSEASPGAPSSQHHKKIILSISTLIAIVGGALIIVGVVTITVLNRRVRSAASHSAVPTALSDDYDSQSPENEANPGKLVMFGRGSPDFSAGGHALLNKDCELGRGGFGTVYKAVLRDGQPVAIKKLTVSSLVKSEDEFKRQVKLLGKVRHHNVVTLRGFYWTSSLQLLIYDFVPGGNLYQHLHESSAERSVSWMERFDIIIGVARALAHLHRHGIIHYNLKSSNVLLDSNGEPRVGDYGLVKLLPMLDRYVLSSKIQSALGYMAPEFTCRTVNVTEKCDVYGFGVIVLEILTGRRPVEYLEDDVVVLCDVVRAALDDGRVEDCMDPRLSGEFSMEEAMLIIKLGLVCTSQVPSHRPDMGEVVSMLEMMG
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.304573 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_05g0478300 | RBH | 0.0 | 0.0 | 1.366869 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g60670 | RBH | 0.0 | 0.0 | 0.474531 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os05g0478300 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_05g0020900 | RBH | 0.0 | 0.818860 | 8.295265 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_05g0020850 | RBH | 0.0 | 1.695527 | 1.363881 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_05g0020750 | RBH | 0.0 | 0.000000 | 11.804994 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_05g0020750 | RBH | 0.0 | 0.341809 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_05g0020850 | RBH | 0.327136 | 9.619754 | 7.281634 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_05G0364200 | RBH | 1.7676455 | 1.735626 | 3.2402685 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_05g0020460 | RBH | 0.0 | 0.807386 | 0.307246 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_05G0373700 | RBH | 1.8499665 | 0.3329185 | 9.184917 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_05g0020680 | RBH | 0.026776 | 0.116257 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_05g0020680 | RBH | 0.0 | 9.862410 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_05g0020760 | RBH | 0.0 | 23.027891 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_05g0020830 | RBH | 0.0 | 0.546602 | 0.740789 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_05g0020830 | RBH | 0.000000 | 5.534028 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_05G020290 | RBH | 0.0 | 6.194884 | 2.566102 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_05g0020730 | RBH | 0.0 | 5.704724 | 3.687293 |
