Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os05g31530 | OGI:05049430 | 16/16 | Nipponbare | IRGSP 1.0 | MSU | Chr05:18341349-18347097 | ||||||||
| Gene Symbol | A1.1-4 | ||||||||||
| DNA seq | GGCCTGGAGTAGCGGTTGCGGAGATTCCGGTGCTCGGTCGCCTCCGCTCTCCGCTCCGGCGGCGAAAACCCGGTGCCGGCCGCCGCACGCCGGCAGCCATGTTCTCTCCTACAAGGGCCGTACGCGTTCTGGAACCAAGGCTCCTCGGAGCGGAGGAAGCCGGATCTCCGCGGTCGGCGCAAGGCACGGCGCGGCAGCCATGGCTCCACAGCCTCCACCTGCAACTGTAAGCTTTACTTTACTTTTTTTTTGACCCTGCCAGTAGCTTAGAGCATTCTAGAGGTAAAGTTTTTCTTCTCTCTTTTTTGTTTTTTTTAATGGGTGGTGGTGGTGGTGGTGGTGGGTGTATGCGTGGATCGGTCTAGCAATATTGTATTCTTGTTGAAGCTTTAATCACAAGAAATTCGGCCATACAGTAGAGTTTTGGGTCGATTCCACAACGGACACCTTTTCCGGTAGAGAATGATAACCCTATTCATACACCGCGGTGATAACAACTGCTGTTAAGGGTGTTACCTTTTATTTTATTTATTTATTTCCTTTTTGAAAAGAAGATCCATATTAGTTCTTTAGTTGCAATTATGCGTGTTATACTTTAGCTTGCCTTTTCCCCCTCCATTCTTGATGCGAAGATGCGCGAACCTTTGCCACCTTCTCTAATAAAGTAATATGTGTGTCATACTGTCATTTTTTATATTGACGCTGTTTAGCTGAAAGATGAAACTACCTCGAAGTTTCATCGTGTTGCTGCTAAGGAGATGTTTCAGTGGAGGGGGATTCTGCTATTACTGGGTTTATGCAATGATTTATAATTCCGGCGAATGATCATTTCTCTTTTGCATAAACCCAACGAACATTCACTGTGATTGCAGCATAAACCCTGGGAACGTCCGCTGGGGCTTTGACATACATGACTTACAATGTACCTCATAGTTGATTCTGTGTTGCATTGGCTTTTACTGTTTTACATTTTGCAATTTTAACTGAAAAAATGCAATGCTATCAATTCTTTGGGTACATGAGTTGGTGTATATGTTCTGTTCATGAACAATTTGGGATATGAAGCACGAATTCAGACACATATGGATAATAGGACACCGCTTTAATGTTATTTTTTTAAAAAATGAAATTCTGGGAGCTTTGGACTTCATCAAAGGAGGTGCCGATCATAGGACTATAGCCTGTCTGCCTGTGCGGACAATATTTACATGTTTGTTCTTTACCTGTTGATCTATGCGTAAATTTTAAAATATAACATGATTATTTGAAATTCACAAGGCGTCACCTAGCATGATGGATGCAATCTTTTTTTTTTCTTCTAATTCTTCAACGAACCACATATTGTCCTCCCTCTTTATGTGCCCCTTACACCAACTTGTTATGTACTGTGTCTTTCCTCCTCCTGTAGATTCTAAATACTAGACCTTCTGCCGACTCTCCACTGCTCTCTCATCTCTTCCGTTTTGTCCATATTCCTTTAAACTCTGAGCTTGGAGCCATGGCTGAGCTACTCTCAGCTCTTCTACCTGCCCTTCTGAAGAAAGCTGGCGAGTCTCTCTCCACAGAGTTTAGTTTCATTGGGGGTATTGAACACCGGCGTTCAGAGCTGTATACCTTGCTGCTTGCCATCAACCAAGTGATCTATGGTGCCGAGGAGCAGGCATCCAAGAAGCCTGCTGTGAAGTCCTGGATCACCAAGCTGAAGCTGGCTGCCTGTGATGCTGATGATGCCCTCGATGAGCTGCACTACGAGGCGCTTCGCAGCGAGGCACTCCGTCGTGGGCATAAAATCAACAGTGGCGTAAGGGCTTTCTTCTCTTCTCATTATAATCCTTTACTGTTCAAGTATAGGATAGGAAAGAAACTCCAGCAGATAGTTGAACAGATTGATCAGCTTGTTTCGCAAATGAATCAATTTGGGTTCCTAAATTGCCCCATGCCAGAGGATGAGAGGATGCAGACCTATTCCTACGTCGACGAGCAGGAAGTTATTGGAAGGGACAAAGAAAGAGATGAAATCATCCATATGCTTCTAAGTGCCAAGAGTGACAAATTGCTAATACTTCCTATTGTTGGGATAGGAGGATTGGGCAAGACAACTCTTGCACAGCTGGTCTTCAATGACGTGAAAGTGAAAGCACATTTTCAAAAGCATATGTGGGTTTGTGTCTCAGAGAACTTCAGTGTTCCTGATATTGTCAAGGGGATAATTGACACTGCAATTGGGAATGATTGTGGACTGAAGAGTGATAACCTGGAATTGCTACAACAACGTCTCCGGGAAGAACTGAGCCAAAAGAGGTACCTCCTTGTACTAGATGATGTTTGGAATGAAGATGAACAAAAATGGGAGGCTCTAAGAACATTGCTTTGTTCCTGTAAAATGGGAAGTGCGGTGGTTGTCACTACCCGAAATTCGAATGTTGCGTCAGTCATGGGGACAGTTCCTCCATTGGCTCTAGAACAACTTAGCCAAGAAGATTCCTGGACTCTATTCTGTGAAAGAGCGTTCCGTACAGGTGTGGCCAAGTCTTGTGAGTTTGTCGAGATTGGTACAAAAATTGTTCAAAAATGTTCTGGAGTCCCATTAGCAATAAATAGTATGGGAGGCCTGCTGAGTAGAAAACATAGTGTAAGGGATTGGCTGGCGATCCTTCAAAACAATACTTGGGAGGAAAATAACATACTGACAGTCCTATCATTGAGCTACAAACATCTACCTTCTTTTATGAAACAGTGCTTTGCTTTTTGTGCTGTATTCCCAAAGGACTACGAGATTGATAAGGATGATCTAATACATCTGTGGATATCAAATGGATTCATTCCATCTAAAGAGACCTCGGACATAGAAGAAACTGGGAACAAGGTTTTTCTGGAGCTTCTTTGGAGATCATTTTTCCAAAATGCGAAGCAAACTCGGTCCCGCAAGGAAGAGTACATATATGGGTACAAAGATGTAACTACATGCAAAATTCATGATCTTATGCATGATCTTGCAGTTTCTATAAGCGGGGATGAGTGCTATACTTTGCAAAATCTTGTTGAAATAAATAAAATGCCGAAGAATGTCCATCATCTAGTTTTCCCACATCCACACAAGATTGGTTTCGTGATGCAGCGTTGTCCAATTATCCGAAGTCTATTTAGTTTACATAAGAATCATATGAATTCTATGAAGGACGTCAGATTCATGGTGTCCCCTTGTAGAGCGCTTGGGCTTCATATCTGTGACAATGAAAGATTCTCAGTTGAACCAGCATATATGAAGCACTTGCGGTATCTTGATTTATCCTCTAGCGACATAAAAACACTCCCTGAAGCGGTCAGTGCACTGTACAATTTACAAATACTAATGCTCAATAGATGCAGGGGCCTGACTCACCTGCCTGACGGCATGAAATTTATGATCAGCCTTCGCCATGTGTACCTTGATGGTTGTTCTAGTCTACAAAGGATGCCGCCGGGTCTAGGGCAGCTCAGCAGTTTACGAACATTGACAATGTATATGGTTGGCAATGAATCTGATTGTAGACTTCATGAACTCAAGGACTTAGAACTTGGGGGCAAGCTACAAATACATAATTTGCTGAAGGTAACAAATCCGTTACAAGCAAAAGAAGCCAACCTTGAGAATAAGAAAAATCTGCAGCAACTAGCACTTTGTTGGGACTCACGAAATTTCACCTGTTCACATTGTCATTCTGCAGATGAATATTTGCAATTATGCCGTCCTGAAGAAGTGCTGGATGCTCTTAAGCCTCCCAACGGATTAAAAGTTCTAAAGCTAAGGCAATATATGGGCTCCAACTTTCCAATGTGGATGGAAGATGGTGTGACACTGCAAAATATTGTTAAACTCAGTTTGAGAGGCTCTGTAATGTGTGTCAAACTCCCACCAGTGTGGCAGCTTCCCTTTCTTGAAGTTCTCCGTCTCAAACGAATGGAGAGGTTGAAATACTTGTGTTACAGGTACCCCACTGATGAAGAATATGGCAACCAATTAGTGGTATTTCAAAAATTAAAATTATTGTCACTAGAATGGATGGAATCCTTAGAGAACTGGCATGAATATGACACTCAACAAGTGACATCAGTTACTTTTCCAAAGCTGGACGCCATGGAAATTATAGACTGCCCAAAACTGACAGCACTGCCTAATGTTCCGATTCTTAAGTCTTTAAGTTTGACAGGAAACAAAGTACTGCTGGGGTTAGTGTCAGGTATTAGTAATCTATCATATCTGTATCTCGGTGCAAGTCAAGGGAGTTCACGGAGGGTAAGAACACTATACTATATCTATAATGGAGAACGTGAAGGAAGCACTGATACAAAGGATGAGCATATTTTGCCCGATCACTTGTTGTCATGGGGTTCACTCACTAAACTACACCTACAAGGATTCAATACACCAGCACCAGAAAATGTGAAGAGTATAAGTGGTCACATGATGTCTGTGCAAGACTTAGTCCTGTCTTCTTGTGATTGCTTCATCCAACATGAAGGATTACAGTCACCACTATGGTTCTGGATATCATTTGGATGCCTACAACAATTAGAAATCTGGTACTGTGATAGCCTCACCTTTTGGCCAGAGGAGGAGTTCCGAAGCTTGACTTCTTTAGAAAAACTCTTCATTGTAGATTGCAAAAACTTCACGGGTGTACCACCTGACCGACTGTCAGCAAGGCCCTCTACAGATGGAGGCCCATGTAATTTGGAATACTTACAGATTGATCGCTGCCCCAACTTAGTGGTATTCCCTACAAACTTCATCTGCCTACGGATCCTTGTGATAACTGACAGTAATGTACTTGAGGGCCTGCCTGGAGGATTTGGTTGCCAGGGCACTCTAACAACTCTCGTAATTTTGGGTTGCCCAAGTTTTAGCTCCCTGCCTGCCAGCATTCGGTGTCTTTCAAATCTGAAAAGCCTAGAACTGACAAGTAATAACAGCTTAACCTCCTTGCCTGAAGGGATGCAGAATCTAACTGCTCTCAAAACACTACATTTTATTAAATGTCCTGGTATAACCGCTTTACCAGAAGGTCTCCAGCAAAGACTGCATGGCCTCCAAACGTTCACCGTTGAAGATTGCCCTGCTCTGGCGAGGAGATGCAGACGTGGGGGAGATTATTGGGAGAAAGTCAAGGACATTCCTGATTTACGAGTGACAAGTGAGCCGCGCCCTGTCTGGCAAGATGCAGCCAGAACCATCATTCCCAAATGCATGAACGCTTGGCAAAGAAGAGCATCAAGTTCTGGGCAGCCAGACAATTAATTTATACTACAAAGGTGCACACTGTTGTCCCTCGTTCTCTCTTTCTTACCCTTGCCTTGCTCTGTTCGATTAAGCAAGTTTGAGTCTTACTTACCTGGGAGCTACGAAACCATTTGTTGCTGCTTTTATCAAGTCAGACATTGTTTAATCGAATGAATTGCATCACTCTGTTTGGAGGAACTTTGGCATCATTCCTCTCATGTTCAGAAATTTTGCAGGTATCTACGCTGAAACATTGTTGGCAACAGGCTCCTTCATGCAGAATGTGTCTTAAAGTGAATGAAATGCATTGCATTTCTCTGCTCGCAACGTATATATGAACCTGCTGGGATCAAGGCCTCTTTGTAACAGTGTACAAACTGTGATATACTGATATTGATTGGAGTTCCACTGCTCAACACTGATTGTGTTATTTCGAGGAATTCCCTCTTTCTAAATATACTGTGATATACCGATATTGATCGGAGTTGC
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| CDS seq | ATGGCTGAGCTACTCTCAGCTCTTCTACCTGCCCTTCTGAAGAAAGCTGGCGAGTCTCTCTCCACAGAGTTTAGTTTCATTGGGGGTATTGAACACCGGCGTTCAGAGCTGTATACCTTGCTGCTTGCCATCAACCAAGTGATCTATGGTGCCGAGGAGCAGGCATCCAAGAAGCCTGCTGTGAAGTCCTGGATCACCAAGCTGAAGCTGGCTGCCTGTGATGCTGATGATGCCCTCGATGAGCTGCACTACGAGGCGCTTCGCAGCGAGGCACTCCGTCGTGGGCATAAAATCAACAGTGGCGTAAGGGCTTTCTTCTCTTCTCATTATAATCCTTTACTGTTCAAGTATAGGATAGGAAAGAAACTCCAGCAGATAGTTGAACAGATTGATCAGCTTGTTTCGCAAATGAATCAATTTGGGTTCCTAAATTGCCCCATGCCAGAGGATGAGAGGATGCAGACCTATTCCTACGTCGACGAGCAGGAAGTTATTGGAAGGGACAAAGAAAGAGATGAAATCATCCATATGCTTCTAAGTGCCAAGAGTGACAAATTGCTAATACTTCCTATTGTTGGGATAGGAGGATTGGGCAAGACAACTCTTGCACAGCTGGTCTTCAATGACGTGAAAGTGAAAGCACATTTTCAAAAGCATATGTGGGTTTGTGTCTCAGAGAACTTCAGTGTTCCTGATATTGTCAAGGGGATAATTGACACTGCAATTGGGAATGATTGTGGACTGAAGAGTGATAACCTGGAATTGCTACAACAACGTCTCCGGGAAGAACTGAGCCAAAAGAGGTACCTCCTTGTACTAGATGATGTTTGGAATGAAGATGAACAAAAATGGGAGGCTCTAAGAACATTGCTTTGTTCCTGTAAAATGGGAAGTGCGGTGGTTGTCACTACCCGAAATTCGAATGTTGCGTCAGTCATGGGGACAGTTCCTCCATTGGCTCTAGAACAACTTAGCCAAGAAGATTCCTGGACTCTATTCTGTGAAAGAGCGTTCCGTACAGGTGTGGCCAAGTCTTGTGAGTTTGTCGAGATTGGTACAAAAATTGTTCAAAAATGTTCTGGAGTCCCATTAGCAATAAATAGTATGGGAGGCCTGCTGAGTAGAAAACATAGTGTAAGGGATTGGCTGGCGATCCTTCAAAACAATACTTGGGAGGAAAATAACATACTGACAGTCCTATCATTGAGCTACAAACATCTACCTTCTTTTATGAAACAGTGCTTTGCTTTTTGTGCTGTATTCCCAAAGGACTACGAGATTGATAAGGATGATCTAATACATCTGTGGATATCAAATGGATTCATTCCATCTAAAGAGACCTCGGACATAGAAGAAACTGGGAACAAGGTTTTTCTGGAGCTTCTTTGGAGATCATTTTTCCAAAATGCGAAGCAAACTCGGTCCCGCAAGGAAGAGTACATATATGGGTACAAAGATGTAACTACATGCAAAATTCATGATCTTATGCATGATCTTGCAGTTTCTATAAGCGGGGATGAGTGCTATACTTTGCAAAATCTTGTTGAAATAAATAAAATGCCGAAGAATGTCCATCATCTAGTTTTCCCACATCCACACAAGATTGGTTTCGTGATGCAGCGTTGTCCAATTATCCGAAGTCTATTTAGTTTACATAAGAATCATATGAATTCTATGAAGGACGTCAGATTCATGGTGTCCCCTTGTAGAGCGCTTGGGCTTCATATCTGTGACAATGAAAGATTCTCAGTTGAACCAGCATATATGAAGCACTTGCGGTATCTTGATTTATCCTCTAGCGACATAAAAACACTCCCTGAAGCGGTCAGTGCACTGTACAATTTACAAATACTAATGCTCAATAGATGCAGGGGCCTGACTCACCTGCCTGACGGCATGAAATTTATGATCAGCCTTCGCCATGTGTACCTTGATGGTTGTTCTAGTCTACAAAGGATGCCGCCGGGTCTAGGGCAGCTCAGCAGTTTACGAACATTGACAATGTATATGGTTGGCAATGAATCTGATTGTAGACTTCATGAACTCAAGGACTTAGAACTTGGGGGCAAGCTACAAATACATAATTTGCTGAAGGTAACAAATCCGTTACAAGCAAAAGAAGCCAACCTTGAGAATAAGAAAAATCTGCAGCAACTAGCACTTTGTTGGGACTCACGAAATTTCACCTGTTCACATTGTCATTCTGCAGATGAATATTTGCAATTATGCCGTCCTGAAGAAGTGCTGGATGCTCTTAAGCCTCCCAACGGATTAAAAGTTCTAAAGCTAAGGCAATATATGGGCTCCAACTTTCCAATGTGGATGGAAGATGGTGTGACACTGCAAAATATTGTTAAACTCAGTTTGAGAGGCTCTGTAATGTGTGTCAAACTCCCACCAGTGTGGCAGCTTCCCTTTCTTGAAGTTCTCCGTCTCAAACGAATGGAGAGGTTGAAATACTTGTGTTACAGGTACCCCACTGATGAAGAATATGGCAACCAATTAGTGGTATTTCAAAAATTAAAATTATTGTCACTAGAATGGATGGAATCCTTAGAGAACTGGCATGAATATGACACTCAACAAGTGACATCAGTTACTTTTCCAAAGCTGGACGCCATGGAAATTATAGACTGCCCAAAACTGACAGCACTGCCTAATGTTCCGATTCTTAAGTCTTTAAGTTTGACAGGAAACAAAGTACTGCTGGGGTTAGTGTCAGGTATTAGTAATCTATCATATCTGTATCTCGGTGCAAGTCAAGGGAGTTCACGGAGGGTAAGAACACTATACTATATCTATAATGGAGAACGTGAAGGAAGCACTGATACAAAGGATGAGCATATTTTGCCCGATCACTTGTTGTCATGGGGTTCACTCACTAAACTACACCTACAAGGATTCAATACACCAGCACCAGAAAATGTGAAGAGTATAAGTGGTCACATGATGTCTGTGCAAGACTTAGTCCTGTCTTCTTGTGATTGCTTCATCCAACATGAAGGATTACAGTCACCACTATGGTTCTGGATATCATTTGGATGCCTACAACAATTAGAAATCTGGTACTGTGATAGCCTCACCTTTTGGCCAGAGGAGGAGTTCCGAAGCTTGACTTCTTTAGAAAAACTCTTCATTGTAGATTGCAAAAACTTCACGGGTGTACCACCTGACCGACTGTCAGCAAGGCCCTCTACAGATGGAGGCCCATGTAATTTGGAATACTTACAGATTGATCGCTGCCCCAACTTAGTGGTATTCCCTACAAACTTCATCTGCCTACGGATCCTTGTGATAACTGACAGTAATGTACTTGAGGGCCTGCCTGGAGGATTTGGTTGCCAGGGCACTCTAACAACTCTCGTAATTTTGGGTTGCCCAAGTTTTAGCTCCCTGCCTGCCAGCATTCGGTGTCTTTCAAATCTGAAAAGCCTAGAACTGACAAGTAATAACAGCTTAACCTCCTTGCCTGAAGGGATGCAGAATCTAACTGCTCTCAAAACACTACATTTTATTAAATGTCCTGGTATAACCGCTTTACCAGAAGGTCTCCAGCAAAGACTGCATGGCCTCCAAACGTTCACCGTTGAAGATTGCCCTGCTCTGGCGAGGAGATGCAGACGTGGGGGAGATTATTGGGAGAAAGTCAAGGACATTCCTGATTTACGAGTGACAAGTGAGCCGCGCCCTGTCTGGCAAGATGCAGCCAGAACCATCATTCCCAAATGCATGAACGCTTGGCAAAGAAGAGCATCAAGTTCTGGGCAGCCAGACAATTAA
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| Protein seq | MAELLSALLPALLKKAGESLSTEFSFIGGIEHRRSELYTLLLAINQVIYGAEEQASKKPAVKSWITKLKLAACDADDALDELHYEALRSEALRRGHKINSGVRAFFSSHYNPLLFKYRIGKKLQQIVEQIDQLVSQMNQFGFLNCPMPEDERMQTYSYVDEQEVIGRDKERDEIIHMLLSAKSDKLLILPIVGIGGLGKTTLAQLVFNDVKVKAHFQKHMWVCVSENFSVPDIVKGIIDTAIGNDCGLKSDNLELLQQRLREELSQKRYLLVLDDVWNEDEQKWEALRTLLCSCKMGSAVVVTTRNSNVASVMGTVPPLALEQLSQEDSWTLFCERAFRTGVAKSCEFVEIGTKIVQKCSGVPLAINSMGGLLSRKHSVRDWLAILQNNTWEENNILTVLSLSYKHLPSFMKQCFAFCAVFPKDYEIDKDDLIHLWISNGFIPSKETSDIEETGNKVFLELLWRSFFQNAKQTRSRKEEYIYGYKDVTTCKIHDLMHDLAVSISGDECYTLQNLVEINKMPKNVHHLVFPHPHKIGFVMQRCPIIRSLFSLHKNHMNSMKDVRFMVSPCRALGLHICDNERFSVEPAYMKHLRYLDLSSSDIKTLPEAVSALYNLQILMLNRCRGLTHLPDGMKFMISLRHVYLDGCSSLQRMPPGLGQLSSLRTLTMYMVGNESDCRLHELKDLELGGKLQIHNLLKVTNPLQAKEANLENKKNLQQLALCWDSRNFTCSHCHSADEYLQLCRPEEVLDALKPPNGLKVLKLRQYMGSNFPMWMEDGVTLQNIVKLSLRGSVMCVKLPPVWQLPFLEVLRLKRMERLKYLCYRYPTDEEYGNQLVVFQKLKLLSLEWMESLENWHEYDTQQVTSVTFPKLDAMEIIDCPKLTALPNVPILKSLSLTGNKVLLGLVSGISNLSYLYLGASQGSSRRVRTLYYIYNGEREGSTDTKDEHILPDHLLSWGSLTKLHLQGFNTPAPENVKSISGHMMSVQDLVLSSCDCFIQHEGLQSPLWFWISFGCLQQLEIWYCDSLTFWPEEEFRSLTSLEKLFIVDCKNFTGVPPDRLSARPSTDGGPCNLEYLQIDRCPNLVVFPTNFICLRILVITDSNVLEGLPGGFGCQGTLTTLVILGCPSFSSLPASIRCLSNLKSLELTSNNSLTSLPEGMQNLTALKTLHFIKCPGITALPEGLQQRLHGLQTFTVEDCPALARRCRRGGDYWEKVKDIPDLRVTSEPRPVWQDAARTIIPKCMNAWQRRASSSGQPDN |
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| Function | Putative disease resistance protein RGA4 [UniProtKB/Swiss-Prot:Q7XA39] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os05g31530 | LOC_Os05g31530.1 | Chr05 | 18341349 | 18347097 | + | MSU_osa1r7 | ||
| CDS seq | ATGGCTGAGCTACTCTCAGCTCTTCTACCTGCCCTTCTGAAGAAAGCTGGCGAGTCTCTCTCCACAGAGTTTAGTTTCATTGGGGGTATTGAACACCGGCGTTCAGAGCTGTATACCTTGCTGCTTGCCATCAACCAAGTGATCTATGGTGCCGAGGAGCAGGCATCCAAGAAGCCTGCTGTGAAGTCCTGGATCACCAAGCTGAAGCTGGCTGCCTGTGATGCTGATGATGCCCTCGATGAGCTGCACTACGAGGCGCTTCGCAGCGAGGCACTCCGTCGTGGGCATAAAATCAACAGTGGCGTAAGGGCTTTCTTCTCTTCTCATTATAATCCTTTACTGTTCAAGTATAGGATAGGAAAGAAACTCCAGCAGATAGTTGAACAGATTGATCAGCTTGTTTCGCAAATGAATCAATTTGGGTTCCTAAATTGCCCCATGCCAGAGGATGAGAGGATGCAGACCTATTCCTACGTCGACGAGCAGGAAGTTATTGGAAGGGACAAAGAAAGAGATGAAATCATCCATATGCTTCTAAGTGCCAAGAGTGACAAATTGCTAATACTTCCTATTGTTGGGATAGGAGGATTGGGCAAGACAACTCTTGCACAGCTGGTCTTCAATGACGTGAAAGTGAAAGCACATTTTCAAAAGCATATGTGGGTTTGTGTCTCAGAGAACTTCAGTGTTCCTGATATTGTCAAGGGGATAATTGACACTGCAATTGGGAATGATTGTGGACTGAAGAGTGATAACCTGGAATTGCTACAACAACGTCTCCGGGAAGAACTGAGCCAAAAGAGGTACCTCCTTGTACTAGATGATGTTTGGAATGAAGATGAACAAAAATGGGAGGCTCTAAGAACATTGCTTTGTTCCTGTAAAATGGGAAGTGCGGTGGTTGTCACTACCCGAAATTCGAATGTTGCGTCAGTCATGGGGACAGTTCCTCCATTGGCTCTAGAACAACTTAGCCAAGAAGATTCCTGGACTCTATTCTGTGAAAGAGCGTTCCGTACAGGTGTGGCCAAGTCTTGTGAGTTTGTCGAGATTGGTACAAAAATTGTTCAAAAATGTTCTGGAGTCCCATTAGCAATAAATAGTATGGGAGGCCTGCTGAGTAGAAAACATAGTGTAAGGGATTGGCTGGCGATCCTTCAAAACAATACTTGGGAGGAAAATAACATACTGACAGTCCTATCATTGAGCTACAAACATCTACCTTCTTTTATGAAACAGTGCTTTGCTTTTTGTGCTGTATTCCCAAAGGACTACGAGATTGATAAGGATGATCTAATACATCTGTGGATATCAAATGGATTCATTCCATCTAAAGAGACCTCGGACATAGAAGAAACTGGGAACAAGGTTTTTCTGGAGCTTCTTTGGAGATCATTTTTCCAAAATGCGAAGCAAACTCGGTCCCGCAAGGAAGAGTACATATATGGGTACAAAGATGTAACTACATGCAAAATTCATGATCTTATGCATGATCTTGCAGTTTCTATAAGCGGGGATGAGTGCTATACTTTGCAAAATCTTGTTGAAATAAATAAAATGCCGAAGAATGTCCATCATCTAGTTTTCCCACATCCACACAAGATTGGTTTCGTGATGCAGCGTTGTCCAATTATCCGAAGTCTATTTAGTTTACATAAGAATCATATGAATTCTATGAAGGACGTCAGATTCATGGTGTCCCCTTGTAGAGCGCTTGGGCTTCATATCTGTGACAATGAAAGATTCTCAGTTGAACCAGCATATATGAAGCACTTGCGGTATCTTGATTTATCCTCTAGCGACATAAAAACACTCCCTGAAGCGGTCAGTGCACTGTACAATTTACAAATACTAATGCTCAATAGATGCAGGGGCCTGACTCACCTGCCTGACGGCATGAAATTTATGATCAGCCTTCGCCATGTGTACCTTGATGGTTGTTCTAGTCTACAAAGGATGCCGCCGGGTCTAGGGCAGCTCAGCAGTTTACGAACATTGACAATGTATATGGTTGGCAATGAATCTGATTGTAGACTTCATGAACTCAAGGACTTAGAACTTGGGGGCAAGCTACAAATACATAATTTGCTGAAGGTAACAAATCCGTTACAAGCAAAAGAAGCCAACCTTGAGAATAAGAAAAATCTGCAGCAACTAGCACTTTGTTGGGACTCACGAAATTTCACCTGTTCACATTGTCATTCTGCAGATGAATATTTGCAATTATGCCGTCCTGAAGAAGTGCTGGATGCTCTTAAGCCTCCCAACGGATTAAAAGTTCTAAAGCTAAGGCAATATATGGGCTCCAACTTTCCAATGTGGATGGAAGATGGTGTGACACTGCAAAATATTGTTAAACTCAGTTTGAGAGGCTCTGTAATGTGTGTCAAACTCCCACCAGTGTGGCAGCTTCCCTTTCTTGAAGTTCTCCGTCTCAAACGAATGGAGAGGTTGAAATACTTGTGTTACAGGTACCCCACTGATGAAGAATATGGCAACCAATTAGTGGTATTTCAAAAATTAAAATTATTGTCACTAGAATGGATGGAATCCTTAGAGAACTGGCATGAATATGACACTCAACAAGTGACATCAGTTACTTTTCCAAAGCTGGACGCCATGGAAATTATAGACTGCCCAAAACTGACAGCACTGCCTAATGTTCCGATTCTTAAGTCTTTAAGTTTGACAGGAAACAAAGTACTGCTGGGGTTAGTGTCAGGTATTAGTAATCTATCATATCTGTATCTCGGTGCAAGTCAAGGGAGTTCACGGAGGGTAAGAACACTATACTATATCTATAATGGAGAACGTGAAGGAAGCACTGATACAAAGGATGAGCATATTTTGCCCGATCACTTGTTGTCATGGGGTTCACTCACTAAACTACACCTACAAGGATTCAATACACCAGCACCAGAAAATGTGAAGAGTATAAGTGGTCACATGATGTCTGTGCAAGACTTAGTCCTGTCTTCTTGTGATTGCTTCATCCAACATGAAGGATTACAGTCACCACTATGGTTCTGGATATCATTTGGATGCCTACAACAATTAGAAATCTGGTACTGTGATAGCCTCACCTTTTGGCCAGAGGAGGAGTTCCGAAGCTTGACTTCTTTAGAAAAACTCTTCATTGTAGATTGCAAAAACTTCACGGGTGTACCACCTGACCGACTGTCAGCAAGGCCCTCTACAGATGGAGGCCCATGTAATTTGGAATACTTACAGATTGATCGCTGCCCCAACTTAGTGGTATTCCCTACAAACTTCATCTGCCTACGGATCCTTGTGATAACTGACAGTAATGTACTTGAGGGCCTGCCTGGAGGATTTGGTTGCCAGGGCACTCTAACAACTCTCGTAATTTTGGGTTGCCCAAGTTTTAGCTCCCTGCCTGCCAGCATTCGGTGTCTTTCAAATCTGAAAAGCCTAGAACTGACAAGTAATAACAGCTTAACCTCCTTGCCTGAAGGGATGCAGAATCTAACTGCTCTCAAAACACTACATTTTATTAAATGTCCTGGTATAACCGCTTTACCAGAAGGTCTCCAGCAAAGACTGCATGGCCTCCAAACGTTCACCGTTGAAGATTGCCCTGCTCTGGCGAGGAGATGCAGACGTGGGGGAGATTATTGGGAGAAAGTCAAGGACATTCCTGATTTACGAGTGACAAGTGAGCCGCGCCCTGTCTGGCAAGATGCAGCCAGAACCATCATTCCCAAATGCATGAACGCTTGGCAAAGAAGAGCATCAAGTTCTGGGCAGCCAGACAATTAA
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| Protein seq | MAELLSALLPALLKKAGESLSTEFSFIGGIEHRRSELYTLLLAINQVIYGAEEQASKKPAVKSWITKLKLAACDADDALDELHYEALRSEALRRGHKINSGVRAFFSSHYNPLLFKYRIGKKLQQIVEQIDQLVSQMNQFGFLNCPMPEDERMQTYSYVDEQEVIGRDKERDEIIHMLLSAKSDKLLILPIVGIGGLGKTTLAQLVFNDVKVKAHFQKHMWVCVSENFSVPDIVKGIIDTAIGNDCGLKSDNLELLQQRLREELSQKRYLLVLDDVWNEDEQKWEALRTLLCSCKMGSAVVVTTRNSNVASVMGTVPPLALEQLSQEDSWTLFCERAFRTGVAKSCEFVEIGTKIVQKCSGVPLAINSMGGLLSRKHSVRDWLAILQNNTWEENNILTVLSLSYKHLPSFMKQCFAFCAVFPKDYEIDKDDLIHLWISNGFIPSKETSDIEETGNKVFLELLWRSFFQNAKQTRSRKEEYIYGYKDVTTCKIHDLMHDLAVSISGDECYTLQNLVEINKMPKNVHHLVFPHPHKIGFVMQRCPIIRSLFSLHKNHMNSMKDVRFMVSPCRALGLHICDNERFSVEPAYMKHLRYLDLSSSDIKTLPEAVSALYNLQILMLNRCRGLTHLPDGMKFMISLRHVYLDGCSSLQRMPPGLGQLSSLRTLTMYMVGNESDCRLHELKDLELGGKLQIHNLLKVTNPLQAKEANLENKKNLQQLALCWDSRNFTCSHCHSADEYLQLCRPEEVLDALKPPNGLKVLKLRQYMGSNFPMWMEDGVTLQNIVKLSLRGSVMCVKLPPVWQLPFLEVLRLKRMERLKYLCYRYPTDEEYGNQLVVFQKLKLLSLEWMESLENWHEYDTQQVTSVTFPKLDAMEIIDCPKLTALPNVPILKSLSLTGNKVLLGLVSGISNLSYLYLGASQGSSRRVRTLYYIYNGEREGSTDTKDEHILPDHLLSWGSLTKLHLQGFNTPAPENVKSISGHMMSVQDLVLSSCDCFIQHEGLQSPLWFWISFGCLQQLEIWYCDSLTFWPEEEFRSLTSLEKLFIVDCKNFTGVPPDRLSARPSTDGGPCNLEYLQIDRCPNLVVFPTNFICLRILVITDSNVLEGLPGGFGCQGTLTTLVILGCPSFSSLPASIRCLSNLKSLELTSNNSLTSLPEGMQNLTALKTLHFIKCPGITALPEGLQQRLHGLQTFTVEDCPALARRCRRGGDYWEKVKDIPDLRVTSEPRPVWQDAARTIIPKCMNAWQRRASSSGQPDN
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.090410 | 0.104986 | 0.180062 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_05g0380300 | SBH | 0.156068 | 0.080026 | 0.317876 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g72390 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os05g0380300 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_05g0015100 | RBH | 0.168440 | 0.000000 | 1.374376 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_05g0015100 | RBH | 0.000000 | 1.771899 | 0.323310 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_05g0014940 | RBH | 0.237723 | 1.694162 | 1.515936 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_05g0014970 | RBH | 0.081286 | 0.059776 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_05g0015130 | RBH | 1.046721 | 8.561803 | 2.671578 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_05G0279900 | RBH | 0.766808 | 12.306753 | 0.6962055 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_05g0014740 | RBH | 0.085246 | 0.542059 | 0.018264 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_05G0291000 | RBH | 0.730504 | 7.285918 | 3.814775 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_05g0014920 | RBH | 0.072388 | 0.115299 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_05g0014950 | RBH | 0.138708 | 5.483084 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_05g0014960 | RBH | 0.0 | 7.173424 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_05g0015020 | RBH | 0.000000 | 0.117872 | 0.054698 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_05g0015080 | RBH | 0.0 | 1.525119 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_05G014640 | RBH | 0.091366 | 3.895263 | 0.723659 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_05g0014910 | RBH | 0.0 | 16.132452 | 0.672282 |
