Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
LOC_Os05g26100 OGI:05039550 | 1/16 Nipponbare | IRGSP 1.0 | MSU Chr05:15176344-15179910
Gene Symbol -
DNA seq

ATGGAGAGGGATTCGGAGGGGAACCAGGAGGGGCACGTGGAGAGGGATGTGGAGGGGAACCAGGAGGAGGAGGCTAGTGGAAGTCAACCCTCCGCTGGACAGAAGAGGGCACGCGGGCAACGAGGTGCCGCGAAGAAGCTTGAGGGTCGGCACATCATAACGGAAGTGGACGAAGACGACCGACCTAGTGCCCCGGCGGAAGCAGCCAAGAACTATGTACGTCACAGCGGTTGGGTTGTGCGGGATAACATGCCTGTCAGTACGGTGTACTGGCGCAGAACAAGGGCATGTGGAGATCATGAGAGTTTTGCCCCAGATTCGGAGAAAGAGATGCTGTGGACAGCAATGCTCGAGACATTCACCCTTCCCGCGGGTACAGAGGACAAAGTGAAAAGGTGGACTCTAAAGAAAATGGCAGAACAGTTTCAGAGCTTCAAGGGAGATCTATACCAGAAATATATCCTGAAGGGGCAGACACCGAACTTCGACACATTCCCAAAGCTAAGGGATCACTGGGACGAGTTCGTTGCATATAAGGCAGGTCAACAAGGGCAGGCGATGATGGAAAGAAACAAAGAAAATGCCGCCAAGAAGAAGTACCATCACCACTTGGGGTCAGGCGGCTATAGCGTCGCGATGCCGAAGTGGGAGGAGATGGAGGCAAGCTTGCTTGAGAGGGGTATCGAACCGGCCACCACTAATTGGCTGGATCGATCGAAGTTCTGGTACTATGCTCACGGTGGAACGCTCAACCCAGTTGATGGCTCCCTGGTCTTCAGCGATCAGATACGCGAGGCTGCGCGTCGACTAACGGACACAGTGGAAGCCTCTTCTCAGGGCACGTTTCGACCCGACAGAGAGAAGGACGAGCTGTCACTCGCCCTGCAGACTCTAGAGCATCCAGGACGAACACAAGGGAAAGTGGTGATTCCTTAGAAGATTGGGTTCAAGGAGGACATCCACATGTACAGGAGTCGGATGAGGAGTAAGAGAGATACCGAGGCGAAGATTATAGATCTTGAGTACAGGGTATCGAGCTACGAGCTCAGCATGCAAGAGGAGGTGGCAAGGAAGGTTGATGAACGCATGGCCGCACATCGGTTCCATGATCCCCAGCCGACCATTCCTCCTGCAATGGTAAGCCCTTCAGGAAATCGTTGCAGCTGCGCCTCAACGGGGCAGGTAGGATCATAGAGCATGGACGCCATGCAAACCCAGGACGAAACCACTTGCCCCGTTGATGACATCACTCAGCGGACACCATGTGAGTTGCATATTCCCTTCAAGAACTTATCAATAAAGGTAAGCTCGTAGTTTATAGATTTTAGATTTGTCCATTCCGCAAGTTGCTGCTTATATATGTTGATTACTAATAAATAACCTCTCACCACGTGAAGGTGGCGTCAGGCATGGCCATCCCAACGGACCCTTCAGGTACTTACTATTGCAGGCCGATTCCAGCAGGATACTCCAAGGTCGAAGTTGAGTTGGTCGAAGACGCGTACGAGGACCTCGAGTTCGATTACCCTGGAGGAGACGGTGAGACGCATCTATGAGACACAAGCCACACCATTATACTATGGCGCAAGCGGTACATCATCCTCCCTGGGCGACAAGCGGCGTCTCGTGCACCATCTCCTCCGGCTCCGCCATCTCCTCCTCAGGCTCCTGCACCGTCTCCTCCTCATGCTCCAGCACCGTCTCCACCTCAGGCTCCTGCACCGACTCCTCCTCAGGCTCCTGCACCGACTCCTCCGCAAGCTCCTCGTTCGGCACCTTCCAAGTCAAGGCCCCCCCAAGCTCCACCACCTGCCCCCACAAGGGCAACGAAGAAGGCGAAAGTTGACGCCGCCAAGAACAAGGACCCAGGGTACGATTGCACGCAAGAGGAGCTTGACGCTTATGTGGCATCAGAAGTCAGGAGACAATTGAAGCCTCGAAGTCCAGAAAAGAAGATTCCTATAGACCCGAGTGTTAGGAACTTCTTCAGGGGTATGTCTGCACCTGCCAAGGAGGCCATAAAGCTATCGGACTATGAGCGAACACTCAAGAAAGCATCTTCTGGAAAGTCCAAACCAGTCCCTCAGCTTGGAGAGCAACCAGACCAGGAGATCGAGCCGTTGGTGACCGGTGAAGATTTTGGAATACAAGAATTTATTAATGACACCGGGCTAACTACGGATCAATTGCTACGAGGCACACCAATCGAAAAGGCGGAAGTGAAATACATGTACGAACTCAGTAAATCGCTTGTCAAGCCTGAGCAGCTGCAATCCCTACCCACACAAATGTACAAGTTCCATCAACTGTACATGGAGATGAGCGCCACCGGTAGAGAGATGATCAGAGCGAGGATCAGGGACACGGACTTCTTGCCAGGAGATGACATTCTCTGGATCAATTTCAAGGGTATCTACGAACCATACCAGCTGGACGCCCTCGACGTCTCTATTATGAGTTGCTGGATTTTGTAAGTATCGTTCAGTTAGATTTCTTATTACGTTTCCTTTAATTAATTAGGTCCTTGTATATAAGTACACTATATATAATATATACTCCCTTTTATCGTTGTAGAATGGAGATTCAAAGGGCCTAACGGCGGGGGGTTTTCGATACTGGATTCATCGACCCTCGGAAAGTAAACGTCGCAATGCTCGACCAGTATCCGCAAGCCATAGAGGACAATCTCATCCATCTCCTGAAGGCGCAGTATTACAAGACGTTCATATTGTTGACGTACAACACAGAGTTAGTTTAATTTTACTGTCTTCCTATACCAAATTTCATTCCCGTACGAACATGCTAAGTGTTTCATAGGTAATGCATCCCACGCACATTGCAGATTCCACTGGGTGCTTTTACTCTTCAACCTGGAGGCCTGCACCGTCAACGTACATGACTCAATGGATAAAAAAGAGTCTACGTTTGACAAGGTTTTCGAACTTGTAGACAGGTACTGTCATAAGTTCCTATGTTAATTAAGAATCTTGTTATAGTTAATTGCTACTACGAATCATAGCTTTAAACTCCATGTAGGGCTTGGTATCAGTTCCGTCATTTCGTCCACGGCAAATGGAGAGAAAGACTTAGGCGGAAGTTCAATTTTCCTGTGAGTACACATGCTCTACATTTATATTGAATCTCCAATTCAAATACATACAAGTGTATATTAATTAGATCTCTTGCCGTTTGTCATTTATTTATAGTGCGCAAAGCAAAAGCAGGGAACTAACTTGTGCGGCTACTACGTGTGCGAGTATTGCCACTGCCTTGCAGACCAAATCATCACCACAAGAGAGCTCGATGTACGTACAAATAAATTCAAAATTTCATTACGTATCGATTTGTTGTTTAATTACTAATTAATTTCATACATTCATATAGTTTATTCGCATGAGGGATAACCTGATCACACACAAGGAATTTATCGCGGCGGTTCAAGAACAACTCATGGGATTCATCAACGAACAAATCCTTGATCCTAAGGGTGAATTCTACTATGACGGAAATACAATTCATAGGTCCTTAGCTTCTGAGATAACGACTACTACTACGTCGAAATCATAG

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CDS seq

ATGGAGAGGGATTCGGAGGGGAACCAGGAGGGGCACGTGGAGAGGGATGTGGAGGGGAACCAGGAGGAGGAGGCTAGTGGAAGTCAACCCTCCGCTGGACAGAAGAGGGCACGCGGGCAACGAGGTGCCGCGAAGAAGCTTGAGGGTCGGCACATCATAACGGAAGTGGACGAAGACGACCGACCTAGTGCCCCGGCGGAAGCAGCCAAGAACTATGTACGTCACAGCGGTTGGGTTGTGCGGGATAACATGCCTGTCAGTACGGTGTACTGGCGCAGAACAAGGGCATGTGGAGATCATGAGAGTTTTGCCCCAGATTCGGAGAAAGAGATGCTGTGGACAGCAATGCTCGAGACATTCACCCTTCCCGCGGGTACAGAGGACAAAGTGAAAAGGTGGACTCTAAAGAAAATGGCAGAACAGTTTCAGAGCTTCAAGGGAGATCTATACCAGAAATATATCCTGAAGGGGCAGACACCGAACTTCGACACATTCCCAAAGCTAAGGGATCACTGGGACGAGTTCGTTGCATATAAGGCAGGTCAACAAGGGCAGGCGATGATGGAAAGAAACAAAGAAAATGCCGCCAAGAAGAAGTACCATCACCACTTGGGGTCAGGCGGCTATAGCGTCGCGATGCCGAAGTGGGAGGAGATGGAGGCAAGCTTGCTTGAGAGGGGTATCGAACCGGCCACCACTAATTGGCTGGATCGATCGAAGTTCTGGTACTATGCTCACGGTGGAACGCTCAACCCAGTTGATGGCTCCCTGAAGATTGGGTTCAAGGAGGACATCCACATGTACAGGAGTCGGATGAGGAGTAAGAGAGATACCGAGGCGAAGATTATAGATCTTGAGTACAGGGTATCGAGCTACGAGCTCAGCATGCAAGAGGAGGTGGCAAGGAAGGTTGATGAACGCATGGCCGCACATCGGTTCCATGATCCCCAGCCGACCATTCCTCCTGCAATGGTGGCGTCAGGCATGGCCATCCCAACGGACCCTTCAGGTACTTACTATTGCAGGCCGATTCCAGCAGGATACTCCAAGGTCGAAGTTGAGTTGGTCGAAGACGCGTACGAGGACCTCGAGTTCGATTACCCTGGAGGAGACGCACCGTCTCCACCTCAGGCTCCTGCACCGACTCCTCCTCAGGCTCCTGCACCGACTCCTCCGCAAGCTCCTCGTTCGGCACCTTCCAAGTCAAGGCCCCCCCAAGCTCCACCACCTGCCCCCACAAGGGCAACGAAGAAGGCGAAAGTTGACGCCGCCAAGAACAAGGACCCAGGGTACGATTGCACGCAAGAGGAGCTTGACGCTTATGTGGCATCAGAAGTCAGGAGACAATTGAAGCCTCGAAGTCCAGAAAAGAAGATTCCTATAGACCCGAGTGTTAGGAACTTCTTCAGGGGTATGTCTGCACCTGCCAAGGAGGCCATAAAGCTATCGGACTATGAGCGAACACTCAAGAAAGCATCTTCTGGAAAGTCCAAACCAGTCCCTCAGCTTGGAGAGCAACCAGACCAGGAGATCGAGCCGTTGGTGACCGGTGAAGATTTTGGAATACAAGAATTTATTAATGACACCGGGCTAACTACGGATCAATTGCTACGAGGCACACCAATCGAAAAGGCGGAAGTGAAATACATGTACGAACTCAGTAAATCGCTTGTCAAGCCTGAGCAGCTGCAATCCCTACCCACACAAATGTACAAGTTCCATCAACTGTACATGGAGATGAGCGCCACCGGTAGAGAGATGATCAGAGCGAGGATCAGGGACACGGACTTCTTGCCAGGAGATGACATTCTCTGGATCAATTTCAAGGGTATCTACGAACCATACCAGCTGGACGCCCTCGACGTCTCTATTATGAGTTGCTGGATTTTATTCCACTGGGTGCTTTTACTCTTCAACCTGGAGGCCTGCACCGTCAACGTACATGACTCAATGGATAAAAAAGAGTCTACGTTTGACAAGGTTTTCGAACTTGTAGACAGGGCTTGGTATCAGTTCCGTCATTTCGTCCACGGCAAATGGAGAGAAAGACTTAGGCGGAAGTTCAATTTTCCTTGCGCAAAGCAAAAGCAGGGAACTAACTTGTGCGGCTACTACGTGTGCGAGTATTGCCACTGCCTTGCAGACCAAATCATCACCACAAGAGAGCTCGATTTTATTCGCATGAGGGATAACCTGATCACACACAAGGAATTTATCGCGGCGGTTCAAGAACAACTCATGGGATTCATCAACGAACAAATCCTTGATCCTAAGGGTGAATTCTACTATGACGGAAATACAATTCATAGGTCCTTAGCTTCTGAGATAACGACTACTACTACGTCGAAATCATAG

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Protein seq

MERDSEGNQEGHVERDVEGNQEEEASGSQPSAGQKRARGQRGAAKKLEGRHIITEVDEDDRPSAPAEAAKNYVRHSGWVVRDNMPVSTVYWRRTRACGDHESFAPDSEKEMLWTAMLETFTLPAGTEDKVKRWTLKKMAEQFQSFKGDLYQKYILKGQTPNFDTFPKLRDHWDEFVAYKAGQQGQAMMERNKENAAKKKYHHHLGSGGYSVAMPKWEEMEASLLERGIEPATTNWLDRSKFWYYAHGGTLNPVDGSLKIGFKEDIHMYRSRMRSKRDTEAKIIDLEYRVSSYELSMQEEVARKVDERMAAHRFHDPQPTIPPAMVASGMAIPTDPSGTYYCRPIPAGYSKVEVELVEDAYEDLEFDYPGGDAPSPPQAPAPTPPQAPAPTPPQAPRSAPSKSRPPQAPPPAPTRATKKAKVDAAKNKDPGYDCTQEELDAYVASEVRRQLKPRSPEKKIPIDPSVRNFFRGMSAPAKEAIKLSDYERTLKKASSGKSKPVPQLGEQPDQEIEPLVTGEDFGIQEFINDTGLTTDQLLRGTPIEKAEVKYMYELSKSLVKPEQLQSLPTQMYKFHQLYMEMSATGREMIRARIRDTDFLPGDDILWINFKGIYEPYQLDALDVSIMSCWILFHWVLLLFNLEACTVNVHDSMDKKESTFDKVFELVDRAWYQFRHFVHGKWRERLRRKFNFPCAKQKQGTNLCGYYVCEYCHCLADQIITTRELDFIRMRDNLITHKEFIAAVQEQLMGFINEQILDPKGEFYYDGNTIHRSLASEITTTTTSKS

Function -

Transcripts

Gene Transcript Chromosome Start End Strand Source
LOC_Os05g26100 LOC_Os05g26100.1 Chr05 15176344 15179910 + MSU_osa1r7
CDS seq

ATGGAGAGGGATTCGGAGGGGAACCAGGAGGGGCACGTGGAGAGGGATGTGGAGGGGAACCAGGAGGAGGAGGCTAGTGGAAGTCAACCCTCCGCTGGACAGAAGAGGGCACGCGGGCAACGAGGTGCCGCGAAGAAGCTTGAGGGTCGGCACATCATAACGGAAGTGGACGAAGACGACCGACCTAGTGCCCCGGCGGAAGCAGCCAAGAACTATGTACGTCACAGCGGTTGGGTTGTGCGGGATAACATGCCTGTCAGTACGGTGTACTGGCGCAGAACAAGGGCATGTGGAGATCATGAGAGTTTTGCCCCAGATTCGGAGAAAGAGATGCTGTGGACAGCAATGCTCGAGACATTCACCCTTCCCGCGGGTACAGAGGACAAAGTGAAAAGGTGGACTCTAAAGAAAATGGCAGAACAGTTTCAGAGCTTCAAGGGAGATCTATACCAGAAATATATCCTGAAGGGGCAGACACCGAACTTCGACACATTCCCAAAGCTAAGGGATCACTGGGACGAGTTCGTTGCATATAAGGCAGGTCAACAAGGGCAGGCGATGATGGAAAGAAACAAAGAAAATGCCGCCAAGAAGAAGTACCATCACCACTTGGGGTCAGGCGGCTATAGCGTCGCGATGCCGAAGTGGGAGGAGATGGAGGCAAGCTTGCTTGAGAGGGGTATCGAACCGGCCACCACTAATTGGCTGGATCGATCGAAGTTCTGGTACTATGCTCACGGTGGAACGCTCAACCCAGTTGATGGCTCCCTGAAGATTGGGTTCAAGGAGGACATCCACATGTACAGGAGTCGGATGAGGAGTAAGAGAGATACCGAGGCGAAGATTATAGATCTTGAGTACAGGGTATCGAGCTACGAGCTCAGCATGCAAGAGGAGGTGGCAAGGAAGGTTGATGAACGCATGGCCGCACATCGGTTCCATGATCCCCAGCCGACCATTCCTCCTGCAATGGTGGCGTCAGGCATGGCCATCCCAACGGACCCTTCAGGTACTTACTATTGCAGGCCGATTCCAGCAGGATACTCCAAGGTCGAAGTTGAGTTGGTCGAAGACGCGTACGAGGACCTCGAGTTCGATTACCCTGGAGGAGACGCACCGTCTCCACCTCAGGCTCCTGCACCGACTCCTCCTCAGGCTCCTGCACCGACTCCTCCGCAAGCTCCTCGTTCGGCACCTTCCAAGTCAAGGCCCCCCCAAGCTCCACCACCTGCCCCCACAAGGGCAACGAAGAAGGCGAAAGTTGACGCCGCCAAGAACAAGGACCCAGGGTACGATTGCACGCAAGAGGAGCTTGACGCTTATGTGGCATCAGAAGTCAGGAGACAATTGAAGCCTCGAAGTCCAGAAAAGAAGATTCCTATAGACCCGAGTGTTAGGAACTTCTTCAGGGGTATGTCTGCACCTGCCAAGGAGGCCATAAAGCTATCGGACTATGAGCGAACACTCAAGAAAGCATCTTCTGGAAAGTCCAAACCAGTCCCTCAGCTTGGAGAGCAACCAGACCAGGAGATCGAGCCGTTGGTGACCGGTGAAGATTTTGGAATACAAGAATTTATTAATGACACCGGGCTAACTACGGATCAATTGCTACGAGGCACACCAATCGAAAAGGCGGAAGTGAAATACATGTACGAACTCAGTAAATCGCTTGTCAAGCCTGAGCAGCTGCAATCCCTACCCACACAAATGTACAAGTTCCATCAACTGTACATGGAGATGAGCGCCACCGGTAGAGAGATGATCAGAGCGAGGATCAGGGACACGGACTTCTTGCCAGGAGATGACATTCTCTGGATCAATTTCAAGGGTATCTACGAACCATACCAGCTGGACGCCCTCGACGTCTCTATTATGAGTTGCTGGATTTTATTCCACTGGGTGCTTTTACTCTTCAACCTGGAGGCCTGCACCGTCAACGTACATGACTCAATGGATAAAAAAGAGTCTACGTTTGACAAGGTTTTCGAACTTGTAGACAGGGCTTGGTATCAGTTCCGTCATTTCGTCCACGGCAAATGGAGAGAAAGACTTAGGCGGAAGTTCAATTTTCCTTGCGCAAAGCAAAAGCAGGGAACTAACTTGTGCGGCTACTACGTGTGCGAGTATTGCCACTGCCTTGCAGACCAAATCATCACCACAAGAGAGCTCGATTTTATTCGCATGAGGGATAACCTGATCACACACAAGGAATTTATCGCGGCGGTTCAAGAACAACTCATGGGATTCATCAACGAACAAATCCTTGATCCTAAGGGTGAATTCTACTATGACGGAAATACAATTCATAGGTCCTTAGCTTCTGAGATAACGACTACTACTACGTCGAAATCATAG

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Protein seq

MERDSEGNQEGHVERDVEGNQEEEASGSQPSAGQKRARGQRGAAKKLEGRHIITEVDEDDRPSAPAEAAKNYVRHSGWVVRDNMPVSTVYWRRTRACGDHESFAPDSEKEMLWTAMLETFTLPAGTEDKVKRWTLKKMAEQFQSFKGDLYQKYILKGQTPNFDTFPKLRDHWDEFVAYKAGQQGQAMMERNKENAAKKKYHHHLGSGGYSVAMPKWEEMEASLLERGIEPATTNWLDRSKFWYYAHGGTLNPVDGSLKIGFKEDIHMYRSRMRSKRDTEAKIIDLEYRVSSYELSMQEEVARKVDERMAAHRFHDPQPTIPPAMVASGMAIPTDPSGTYYCRPIPAGYSKVEVELVEDAYEDLEFDYPGGDAPSPPQAPAPTPPQAPAPTPPQAPRSAPSKSRPPQAPPPAPTRATKKAKVDAAKNKDPGYDCTQEELDAYVASEVRRQLKPRSPEKKIPIDPSVRNFFRGMSAPAKEAIKLSDYERTLKKASSGKSKPVPQLGEQPDQEIEPLVTGEDFGIQEFINDTGLTTDQLLRGTPIEKAEVKYMYELSKSLVKPEQLQSLPTQMYKFHQLYMEMSATGREMIRARIRDTDFLPGDDILWINFKGIYEPYQLDALDVSIMSCWILFHWVLLLFNLEACTVNVHDSMDKKESTFDKVFELVDRAWYQFRHFVHGKWRERLRRKFNFPCAKQKQGTNLCGYYVCEYCHCLADQIITTRELDFIRMRDNLITHKEFIAAVQEQLMGFINEQILDPKGEFYYDGNTIHRSLASEITTTTTSKS

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.0 0.0 0.0

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) NA NA NA NA NA
Nipponbare | IRGSP 1.0 | MSU LOC_Os08g35830 SBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | RAP-db NA NA NA NA NA
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_05g0011160 SBH 0.000000 0.0 0.0
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_05g0011180 SBH 0.0 0.0 0.0
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_05g0011120 SBH 0.351198 0.0 3.147943
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_05g0011180 SBH 0.135270 0.0 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_05g0011150 SBH 0.0 0.0 0.0
Minghui 63 | MH63RS3 | HZAU OsMH63_05G0161700 SBH 0 0 0
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_05g0010930 SBH 0.0 0.0 0.0
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_05G0235900 SBH 0 0 0
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_05g0011100 SBH 0.0 0.0 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_05g0011040 SBH 0.0 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_05g0011190 SBH 0.0 0.0 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_05g0011200 SBH 0.0 0.0 0.0
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_05g0011180 SBH 0.0 0.0 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_05G010880 SBH 0.0 0.0 0.0
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_05g0011200 SBH 0.0 0.0 0.0
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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