Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
LOC_Os04g54120 OGI:04027370 | 16/16 Nipponbare | IRGSP 1.0 | MSU Chr04:32244877-32248178
Gene Symbol RLCK165, OsRLCK165, SDK9
DNA seq

CTAACGCCCCTGTAGTGTGGTAAGGCTCATGCTGTTTACAGATTTGTTGGCGTCCTGTCTCGTCCCTTCGGCCATATAATTCCTTGGCACGAAATATGCAGGTTGCTTTGGAGTAGGACGTGCTGTGGTCTCATTCTCTAACATGGCCACAACTGATGACATGAATGGTCTAGCACTTGGGTCTTCCTGGACACATAACAGTCCTAAGTGGATACAGAGCAAAAACTCGCTAATTGCATAGCTTTCCAGAATAATTGAGTCCACAAAATCCTCTGCATTTCCATCTTTCCACAAGCTCCAGGCCTGAACAAAGAGAAGAGAGTTTCTAATTAGTGCAAAACTTTAGCTGTTGAAACTTTGTGCACTATATGTCATACAACTTACACGGGCTATAAGGTTTGGAAAATCCATTGTCAGATGAGGTGAGCTGATCTTAGAGCCACTTATAAGCTCCAAGACTAAAACACCAAAGCTGTAGGTGTCAGACTTGACAGAGAAGATGCCTTCCATCGCATATTCAGGTGACATGTAACCACTGTTTAAATCATGTCACCAACTGAGTGTAAGTAGTTTGAATGCGTTCAAGTATATAGAAGTTTGTATTTTATACACAGGTAGTTGAAGAGTTACTCACTATGTCCCGACTACATGCTTAGTGTTTGCTTGATGCTGGTTGCTACCAAAGATTCTCGCCATACCAAAATCTGATATTTTGGGGCTCATCTCCTCATCCAATAAAATGTTGCTGGCTTTGAGATCTCTGTGAATTATTGTCATCCTTGAGTCTTGGTGGAGATAAACAAGTCCTCTAGCTACTCCTTTGATTATGTTGAACCGTGTTCGCCAATCAAGCATAGACTTTTTTGAATCATCTACGACGGACATTATGAAAGGAAACTTATTGTTGTTCAGGCTTTGGGAACCCTCTCGGCCTCTCCCACCAAAAGTGAAAAAGGTAAAAAGAGAATATATAATTATTACATACCAAAAAGGAAGTAATCCAGGCTTCTGTTTGGTAAGTATTCATAAATAAGAAGCTTCTCTTCTCCATGAATGCAGCAACCAAGAAGCCTGACTAGATTTTTGTGCTGCAATTTGGCAATAAGAACCACTTCATTTGTAAAATGCTCTACCCCCTGTGTGGAACCTGTACCGAGTCTTTTGACAGCAACTTCTTTGCCTCCTTCCAACTTCCCCTGTATAGTAAAATTATTTTAACAGGATAAAAATTATAAGGCTTGTCCACTGCTACAACTCTTAGTGTAAATTGTTACCTTATAAACCTTACCAAAACCTCCTTTGCCAAGCATGTTGGAATCACTGAAATTGTTTGTTGCAGTAGCAACCTCTTCAAAATTAATATTTGGAAATTCTACCTTCTGCTCAAAAAGTTCGTGAGAAGTTGTAAAGTTTCCTAACACTGTTCTCTTCTTATTTTCGTCATTTCTCTGTTTGCCTAATAAGAACATCATTATCGGTCAGTAGTTACAGGAAGACTGCATAGTGTTAGTTAGTATTGAGTATTGACCCTCACTGTACCTTTTGTTTGCCACTTCCTGACAAGGTATATGGATGTGAATGTCAGCAGGCATGCTATAATTGGGACTACAACCTTCACTACTTTTTTGTTCTTTTTGTTGGCTTCAGAAGTGTACCCTATCAAGAAAAGTGATTTTTTTTCTCAGAATTCCATGTACAAGCTATCTAAGGGTATCATCAATGTATATGGCAAAAGTAGTCTATATAGATGGGATCCACATAAATAAACTTTACCTATAGCAATCCTCACAATGTATATGGATACAATGTGACATTAGGAGAAGAGAGAGAAGTAGAGATAGATAATATTATTTATGTCATATGGGTAGTCCATATGCATATGGATACCTTTTGCTATTTTCTTTATATAGACTAGTTGCACAATATTACTAGATGACTGAATGGAATAGTTTATTCCCTATGGACTACTTTTGTAGTACATTGTGGATGCCCTAAGAGTTATATTGCAACTGCAGGGGAAAAAAGGTGGGCATACCAGGAGAGTAGGCCAACCGGAGGTACAGGTTCTGACCATCACCAAAACCAGTCCTCCCCGTGTCGACTAGCTCCCCAGTCCAAAGCAAGCACCTTGATTGGTCTGCCGTGGTGCCGGCTATGGTCAAGTTTGCATAAGCATAAGCCGTGCACGAGCAGTTGCGGTTGCACTCAGCCGTGCACTCATCAAAGCTTCTGTTTGGGACAGGAATGAACTTGTCAGGGACCTTCATTCCGGACATGGTCACAAAATGATTCCCATCTCCGCATCTCAACTGTTGCTTTCTTCGGCATCCTCTCGAAGAGTTGGTGGTGTCAGGCTCGAACCCATCGAGGCATTGGCACCTTGGGATGGCTAGCATGGCATCACAGTAGCCGAATGGGCCACATGAGGCGTAGGTATAGCAGTCGATGGTGCTCGCTGGGCGTTGTAAGCGAACTGTCCATGATGACGAGCTATCATCCCAACTCAGGAACCTGAAGGTTCCCATGTAATCAAGCATGATGCGTGCATTTGCTGAGCCATCAGAGGTTGTGTACCTAACATAGAATTCATCCTGTGTGTTCACCAGAGTTTGATATATGAAAGAGGTGGTGTTGCTGCCGTATGCTTCGCCGGACACTGACACACTACCAATCACGACGAAGCGGTAATATGGCTTGGTCCCATGCCAGATGAAGGCCTGAATGTCTAAGCTGGGGTCGCCACTCAAGGAGAATTCCCCGGTGGATGGATCATTTGGGCCCTTCCAAGCGACAAGTCGCCTGCTGACTTGTGCCTTGTACCTCAGCAAAAACTTCATGTTGGGCAGAATGGTGTCAGTTGGGTGATCAAAGCTTTGCCATATGATTGTTTCGTTTGGCAGCTGGAGAACCAAGTTTCCTGTGTCAAGTAACGCTGCATAAGCACCGTCGCCTCCAGTTATGGTGATGTTCGTTGTCCAAAGAGTTCGGCCTTCGGAATCTGACAAGACAAGGTTAGAGCTATTGCTGATGGCGAGCATCACGGATGATGAAGGTGTGGAGATCGGGTTGTCTCGGTTGGCAACCCAAACATATGTGCGCTGCGGGATGTTGTGGTACCATATGCCAAGATATAAGCTCTTGTTGGAGGTTCCAGGGGAGAAGAACCCGAGCGCAAACACCCCGCTCTTGGAGCCAAGCACGTCGCCTGGGTGGAGCTGCTTTGCTTGTGTCAGCTGATCATCGCACTTGCAGAAGGAGATGAGGAGCAAGCAGATGAGAAAGGGGAGGCATGCCATATTCAT

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CDS seq

ATGAATATGGCATGCCTCCCCTTTCTCATCTGCTTGCTCCTCATCTCCTTCTGCAAGTGCGATGATCAGCTGACACAAGCAAAGCAGCTCCACCCAGGCGACGTGCTTGGCTCCAAGAGCGGGGTGTTTGCGCTCGGGTTCTTCTCCCCTGGAACCTCCAACAAGAGCTTATATCTTGGCATATGGTACCACAACATCCCGCAGCGCACATATGTTTGGGTTGCCAACCGAGACAACCCGATCTCCACACCTTCATCATCCGTGATGCTCGCCATCAGCAATAGCTCTAACCTTGTCTTGTCAGATTCCGAAGGCCGAACTCTTTGGACAACGAACATCACCATAACTGGAGGCGACGGTGCTTATGCAGCGTTACTTGACACAGGAAACTTGGTTCTCCAGCTGCCAAACGAAACAATCATATGGCAAAGCTTTGATCACCCAACTGACACCATTCTGCCCAACATGAAGTTTTTGCTGAGGTACAAGGCACAAGTCAGCAGGCGACTTGTCGCTTGGAAGGGCCCAAATGATCCATCCACCGGGGAATTCTCCTTGAGTGGCGACCCCAGCTTAGACATTCAGGCCTTCATCTGGCATGGGACCAAGCCATATTACCGCTTCGTCGTGATTGGTAGTGTGTCAGTGTCCGGCGAAGCATACGGCAGCAACACCACCTCTTTCATATATCAAACTCTGGTGAACACACAGGATGAATTCTATGTTAGGTACACAACCTCTGATGGCTCAGCAAATGCACGCATCATGCTTGATTACATGGGAACCTTCAGGTTCCTGAGTTGGGATGATAGCTCGTCATCATGGACAGTTCGCTTACAACGCCCAGCGAGCACCATCGACTGCTATACCTACGCCTCATGTGGCCCATTCGGCTACTGTGATGCCATGCTAGCCATCCCAAGGTGCCAATGCCTCGATGGGTTCGAGCCTGACACCACCAACTCTTCGAGAGGATGCCGAAGAAAGCAACAGTTGAGATGCGGAGATGGGAATCATTTTGTGACCATGTCCGGAATGAAGGTCCCTGACAAGTTCATTCCTGTCCCAAACAGAAGCTTTGATGAGTGCACGGCTGAGTGCAACCGCAACTGCTCGTGCACGGCTTATGCTTATGCAAACTTGACCATAGCCGGCACCACGGCAGACCAATCAAGGTGCTTGCTTTGGACTGGGGAGCTAGTCGACACGGGGAGGACTGGTTTTGGTGATGGTCAGAACCTGTACCTCCGGTTGGCCTACTCTCCTGGGTACACTTCTGAAGCCAACAAAAAGAACAAAAAAGTAGTGAAGGTTGTAGTCCCAATTATAGCATGCCTGCTGACATTCACATCCATATACCTTGTCAGGAAGTGGCAAACAAAAGGCAAACAGAGAAATGACGAAAATAAGAAGAGAACAGTGTTAGGAAACTTTACAACTTCTCACGAACTTTTTGAGCAGAAGGTAGAATTTCCAAATATTAATTTTGAAGAGGTTGCTACTGCAACAAACAATTTCAGTGATTCCAACATGCTTGGCAAAGGAGGTTTTGGTAAGGTTTATAAGGGGAAGTTGGAAGGAGGCAAAGAAGTTGCTGTCAAAAGACTCGGTACAGGTTCCACACAGGGGGTAGAGCATTTTACAAATGAAGTGGTTCTTATTGCCAAATTGCAGCACAAAAATCTAGTCAGGCTTCTTGGTTGCTGCATTCATGGAGAAGAGAAGCTTCTTATTTATGAATACTTACCAAACAGAAGCCTGGATTACTTCCTTTTTGATGATTCAAAAAAGTCTATGCTTGATTGGCGAACACGGTTCAACATAATCAAAGGAGTAGCTAGAGGACTTGTTTATCTCCACCAAGACTCAAGGATGACAATAATTCACAGAGATCTCAAAGCCAGCAACATTTTATTGGATGAGGAGATGAGCCCCAAAATATCAGATTTTGGTATGGCGAGAATCTTTGGTAGCAACCAGCATCAAGCAAACACTAAGCATGTAGTCGGGACATATGGTTACATGTCACCTGAATATGCGATGGAAGGCATCTTCTCTGTCAAGTCTGACACCTACAGCTTTGGTGTTTTAGTCTTGGAGCTTATAAGTGGCTCTAAGATCAGCTCACCTCATCTGACAATGGATTTTCCAAACCTTATAGCCCGTGCCTGGAGCTTGTGGAAAGATGGAAATGCAGAGGATTTTGTGGACTCAATTATTCTGGAAAGCTATGCAATTAGCGAGTTTTTGCTCTGTATCCACTTAGGACTGTTATGTGTCCAGGAAGACCCAAGTGCTAGACCATTCATGTCATCAGTTGTGGCCATGTTAGAGAATGAGACCACAGCACGTCCTACTCCAAAGCAACCTGCATATTTCGTGCCAAGGAATTATATGGCCGAAGGGACGAGACAGGACGCCAACAAATCTGTAAACAGCATGAGCCTTACCACACTACAGGGGCGTTAG

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Protein seq

MNMACLPFLICLLLISFCKCDDQLTQAKQLHPGDVLGSKSGVFALGFFSPGTSNKSLYLGIWYHNIPQRTYVWVANRDNPISTPSSSVMLAISNSSNLVLSDSEGRTLWTTNITITGGDGAYAALLDTGNLVLQLPNETIIWQSFDHPTDTILPNMKFLLRYKAQVSRRLVAWKGPNDPSTGEFSLSGDPSLDIQAFIWHGTKPYYRFVVIGSVSVSGEAYGSNTTSFIYQTLVNTQDEFYVRYTTSDGSANARIMLDYMGTFRFLSWDDSSSSWTVRLQRPASTIDCYTYASCGPFGYCDAMLAIPRCQCLDGFEPDTTNSSRGCRRKQQLRCGDGNHFVTMSGMKVPDKFIPVPNRSFDECTAECNRNCSCTAYAYANLTIAGTTADQSRCLLWTGELVDTGRTGFGDGQNLYLRLAYSPGYTSEANKKNKKVVKVVVPIIACLLTFTSIYLVRKWQTKGKQRNDENKKRTVLGNFTTSHELFEQKVEFPNINFEEVATATNNFSDSNMLGKGGFGKVYKGKLEGGKEVAVKRLGTGSTQGVEHFTNEVVLIAKLQHKNLVRLLGCCIHGEEKLLIYEYLPNRSLDYFLFDDSKKSMLDWRTRFNIIKGVARGLVYLHQDSRMTIIHRDLKASNILLDEEMSPKISDFGMARIFGSNQHQANTKHVVGTYGYMSPEYAMEGIFSVKSDTYSFGVLVLELISGSKISSPHLTMDFPNLIARAWSLWKDGNAEDFVDSIILESYAISEFLLCIHLGLLCVQEDPSARPFMSSVVAMLENETTARPTPKQPAYFVPRNYMAEGTRQDANKSVNSMSLTTLQGR

Function G-type lectin S-receptor-like serine/threonine-protein kinase B120 [UniProtKB/Swiss-Prot:O81906]

Transcripts

Gene Transcript Chromosome Start End Strand Source
LOC_Os04g54120 LOC_Os04g54120.1 Chr04 32244877 32248178 - MSU_osa1r7
CDS seq

ATGAATATGGCATGCCTCCCCTTTCTCATCTGCTTGCTCCTCATCTCCTTCTGCAAGTGCGATGATCAGCTGACACAAGCAAAGCAGCTCCACCCAGGCGACGTGCTTGGCTCCAAGAGCGGGGTGTTTGCGCTCGGGTTCTTCTCCCCTGGAACCTCCAACAAGAGCTTATATCTTGGCATATGGTACCACAACATCCCGCAGCGCACATATGTTTGGGTTGCCAACCGAGACAACCCGATCTCCACACCTTCATCATCCGTGATGCTCGCCATCAGCAATAGCTCTAACCTTGTCTTGTCAGATTCCGAAGGCCGAACTCTTTGGACAACGAACATCACCATAACTGGAGGCGACGGTGCTTATGCAGCGTTACTTGACACAGGAAACTTGGTTCTCCAGCTGCCAAACGAAACAATCATATGGCAAAGCTTTGATCACCCAACTGACACCATTCTGCCCAACATGAAGTTTTTGCTGAGGTACAAGGCACAAGTCAGCAGGCGACTTGTCGCTTGGAAGGGCCCAAATGATCCATCCACCGGGGAATTCTCCTTGAGTGGCGACCCCAGCTTAGACATTCAGGCCTTCATCTGGCATGGGACCAAGCCATATTACCGCTTCGTCGTGATTGGTAGTGTGTCAGTGTCCGGCGAAGCATACGGCAGCAACACCACCTCTTTCATATATCAAACTCTGGTGAACACACAGGATGAATTCTATGTTAGGTACACAACCTCTGATGGCTCAGCAAATGCACGCATCATGCTTGATTACATGGGAACCTTCAGGTTCCTGAGTTGGGATGATAGCTCGTCATCATGGACAGTTCGCTTACAACGCCCAGCGAGCACCATCGACTGCTATACCTACGCCTCATGTGGCCCATTCGGCTACTGTGATGCCATGCTAGCCATCCCAAGGTGCCAATGCCTCGATGGGTTCGAGCCTGACACCACCAACTCTTCGAGAGGATGCCGAAGAAAGCAACAGTTGAGATGCGGAGATGGGAATCATTTTGTGACCATGTCCGGAATGAAGGTCCCTGACAAGTTCATTCCTGTCCCAAACAGAAGCTTTGATGAGTGCACGGCTGAGTGCAACCGCAACTGCTCGTGCACGGCTTATGCTTATGCAAACTTGACCATAGCCGGCACCACGGCAGACCAATCAAGGTGCTTGCTTTGGACTGGGGAGCTAGTCGACACGGGGAGGACTGGTTTTGGTGATGGTCAGAACCTGTACCTCCGGTTGGCCTACTCTCCTGGGTACACTTCTGAAGCCAACAAAAAGAACAAAAAAGTAGTGAAGGTTGTAGTCCCAATTATAGCATGCCTGCTGACATTCACATCCATATACCTTGTCAGGAAGTGGCAAACAAAAGGCAAACAGAGAAATGACGAAAATAAGAAGAGAACAGTGTTAGGAAACTTTACAACTTCTCACGAACTTTTTGAGCAGAAGGTAGAATTTCCAAATATTAATTTTGAAGAGGTTGCTACTGCAACAAACAATTTCAGTGATTCCAACATGCTTGGCAAAGGAGGTTTTGGTAAGGTTTATAAGGGGAAGTTGGAAGGAGGCAAAGAAGTTGCTGTCAAAAGACTCGGTACAGGTTCCACACAGGGGGTAGAGCATTTTACAAATGAAGTGGTTCTTATTGCCAAATTGCAGCACAAAAATCTAGTCAGGCTTCTTGGTTGCTGCATTCATGGAGAAGAGAAGCTTCTTATTTATGAATACTTACCAAACAGAAGCCTGGATTACTTCCTTTTTGATGATTCAAAAAAGTCTATGCTTGATTGGCGAACACGGTTCAACATAATCAAAGGAGTAGCTAGAGGACTTGTTTATCTCCACCAAGACTCAAGGATGACAATAATTCACAGAGATCTCAAAGCCAGCAACATTTTATTGGATGAGGAGATGAGCCCCAAAATATCAGATTTTGGTATGGCGAGAATCTTTGGTAGCAACCAGCATCAAGCAAACACTAAGCATGTAGTCGGGACATATGGTTACATGTCACCTGAATATGCGATGGAAGGCATCTTCTCTGTCAAGTCTGACACCTACAGCTTTGGTGTTTTAGTCTTGGAGCTTATAAGTGGCTCTAAGATCAGCTCACCTCATCTGACAATGGATTTTCCAAACCTTATAGCCCGTGCCTGGAGCTTGTGGAAAGATGGAAATGCAGAGGATTTTGTGGACTCAATTATTCTGGAAAGCTATGCAATTAGCGAGTTTTTGCTCTGTATCCACTTAGGACTGTTATGTGTCCAGGAAGACCCAAGTGCTAGACCATTCATGTCATCAGTTGTGGCCATGTTAGAGAATGAGACCACAGCACGTCCTACTCCAAAGCAACCTGCATATTTCGTGCCAAGGAATTATATGGCCGAAGGGACGAGACAGGACGCCAACAAATCTGTAAACAGCATGAGCCTTACCACACTACAGGGGCGTTAG

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Protein seq

MNMACLPFLICLLLISFCKCDDQLTQAKQLHPGDVLGSKSGVFALGFFSPGTSNKSLYLGIWYHNIPQRTYVWVANRDNPISTPSSSVMLAISNSSNLVLSDSEGRTLWTTNITITGGDGAYAALLDTGNLVLQLPNETIIWQSFDHPTDTILPNMKFLLRYKAQVSRRLVAWKGPNDPSTGEFSLSGDPSLDIQAFIWHGTKPYYRFVVIGSVSVSGEAYGSNTTSFIYQTLVNTQDEFYVRYTTSDGSANARIMLDYMGTFRFLSWDDSSSSWTVRLQRPASTIDCYTYASCGPFGYCDAMLAIPRCQCLDGFEPDTTNSSRGCRRKQQLRCGDGNHFVTMSGMKVPDKFIPVPNRSFDECTAECNRNCSCTAYAYANLTIAGTTADQSRCLLWTGELVDTGRTGFGDGQNLYLRLAYSPGYTSEANKKNKKVVKVVVPIIACLLTFTSIYLVRKWQTKGKQRNDENKKRTVLGNFTTSHELFEQKVEFPNINFEEVATATNNFSDSNMLGKGGFGKVYKGKLEGGKEVAVKRLGTGSTQGVEHFTNEVVLIAKLQHKNLVRLLGCCIHGEEKLLIYEYLPNRSLDYFLFDDSKKSMLDWRTRFNIIKGVARGLVYLHQDSRMTIIHRDLKASNILLDEEMSPKISDFGMARIFGSNQHQANTKHVVGTYGYMSPEYAMEGIFSVKSDTYSFGVLVLELISGSKISSPHLTMDFPNLIARAWSLWKDGNAEDFVDSIILESYAISEFLLCIHLGLLCVQEDPSARPFMSSVVAMLENETTARPTPKQPAYFVPRNYMAEGTRQDANKSVNSMSLTTLQGR

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.0 0.0 0.0

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_04g0633800 RBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | MSU LOC_Os04g54010 RBH 0.468947 0.578079 0.668178
Nipponbare | IRGSP 1.0 | RAP-db Os04g0633800 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_04g0027900 RBH 0.0 0.0 0.000000
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_04g0028560 SBH 0.047108 0.229314 0.848784
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_04g0028230 SBH 0.369437 0.739790 2.057186
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_04g0028030 SBH 0.031282 0.013722 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_04g0028290 SBH 28.615248 3.884939 5.803555
Minghui 63 | MH63RS3 | HZAU OsMH63_04G0508300 RBH 0 0.081849 0
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_04g0026980 SBH 0.129210 0.011754 0.285752
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_04G0512300 RBH 0.004939 0.0520535 0
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_04g0027400 SBH 0.500196 0.000000 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_04g0027200 SBH 0.0 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_04g0027340 SBH 0.0 0.0 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_04g0027820 SBH 0.128691 0.086759 0.434129
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_04g0027880 SBH 0.0 0.604004 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_04G027300 RBH 0.0 0.127300 0.0
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_04g0027160 SBH 0.766234 0.0 0.641462
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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