Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os04g48760 | OGI:04086160 | 16/16 | Nipponbare | IRGSP 1.0 | MSU | Chr04:29082343-29086795 | ||||||||
| Gene Symbol | XIAO, OsXIAO | ||||||||||
| DNA seq | AAAACCTCGCAACCAAACCCCTCTCTTCTTTTTCTCTCCCTCCGTCTCCTCTCCAAATGCAAAGCTCTCTTCTCTTCTCTCGCTCCTCGCTCTCTCCATCCATGGCCATGAGGGCCTAAATGCCAAAGCAGTCAAGCTGATAAGACCGAGAGAGAAAGGTGTTCCTTTCCGTCCTCGCACCCCCCGGCTCCGATTTTCTGCTCCCGCCATGCCGCCGCCGCCAAGGCTGCTGTTCTTGCTCGTCATGCTGCTGGTGGTCGCGGCGCCCGGCGCGCCGGTGTTCGGGGCGAACGCGCCGCCGGAGGTGAAGGCGGAGATCGACGCGCTACTCATGTTCCGGAGCGGGCTGCGCGACCCTTACGCCGCCATGTCCGGGTGGAACGCGTCCTCGCCGTCCGCGCCCTGCTCCTGGCGCGGCGTGGCGTGTGCGGCCGGCACCGGCCGCGTCGTCGAGCTGGCGCTCCCGAAACTCCGCCTGTCCGGCGCCATCTCCCCGGCGCTGTCATCGCTCGTATACCTCGAGAAGCTCAGCCTCCGCTCCAACTCGCTCTCCGGCACCATCCCGGCGTCCCTCTCCCGCATCTCCTCCCTCCGCGCCGTCTACCTCCAGTACACTCCCTCTCCGTGCCCATTCTCTAGTCATTCCTCGCCAACTAGACAACCTCCAGACGTTCGACGTGTCCGGCAACCTCTTGTCCGGCCCTGTCCCTGTTTCCTTCCCTCCCAGCTTGAAGTACCTTGACCTCTCCTCCAATGCCTTCTCCGGCACCATCCCGGCGAACGTCAGCGCGTCGGCGACGAGCCTCCAGTTCTTGAACCTGTCATTCAACCGCCTCCGGGGCACAGTCCCGGCGTCGCTGGGGACCTTGCAGGACCTGCATTACCTCTGGCTGGACGGGAACCTGCTTGAGGGCACCATCCCGTCGGCGCTGTCCAACTGCTCGGCGCTGCTCCACCTCAGCCTGCAGGGGAATGCGCTCCGCGGCATCTTGCCGCCCGCGGTGGCGGCGATTCCCTCGCTGCAGATTCTTTCGGTGTCTCGGAACCGGCTCACCGGCGCCATCCCGGCTGCGGCGTTCGGCGGCGTGGGGAACTCGTCGCTGCGCATCGTGCAGGTCGGCGGCAACGCGTTCTCCCAGGTGGACGTGCCGGTGTCGCTCGGCAAGGATCTCCAGGTGGTGGACTTGAGGGCCAACAAACTGGCCGGCCCATTCCCGTCCTGGCTCGCCGGGGCTGGGGGGTTGACGGTGCTCGACCTTTCGGGCAATGCGTTCACCGGCGAAGTACCTCCGGCGGTCGGGCAGCTCACTGCGCTGCAGGAACTGCGGCTTGGCGGCAATGCCTTCACAGGCACCGTGCCGGCGGAGATTGGCAGATGCGGTGCGCTCCAGGTGCTTGATCTCGAAGACAACCGCTTCTCCGGCGAGGTACCTGCCGCTCTTGGCGGTCTCCGGCGGCTCAGAGAGGTGTATCTTGGCGGTAACTCATTCTCCGGCCAGATTCCGGCCAGTTTGGGCAACCTCTCGTGGCTGGAAGCATTGTCCACACCGGGGAATCGGCTCACCGGCGATTTGCCCAGTGAGCTCTTCGTGCTGGGGAATCTGACATTCTTGGACCTCTCCGACAACAAGCTCGCCGGGGAGATCCCTCCTTCCATCGGCAATCTGGCCGCTCTGCAGAGTTTAAATTTGAGCGGCAACTCCTTCTCCGGCCGCATTCCGTCCAACATTGGCAACCTGCTGAACCTGAGAGTTCTTGACCTCTCTGGTCAGAAGAACCTCTCGGGCAATCTCCCGGCAGAGCTCTTCGGTTTGCCACAGCTGCAGTATGTGTCGCTCGCCGGAAACTCTTTCTCCGGTGATGTTCCGGAGGGGTTCAGCAGCCTGTGGAGTCTGCGCCACCTCAACCTCTCGGTGAACTCATTCACAGGCTCAATGCCGGCTACCTATGGATACTTGCCATCACTCCAGGTGCTCTCGGCCTCCCACAACCGCATCTGCGGTGAGCTGCCTGTGGAGCTCGCCAACTGTTCCAACCTCACCGTGCTTGATCTCAGGAGCAACCAGTTGACTGGCCCAATCCCCGGTGATTTTGCGCGCCTCGGCGAATTGGAGGAGCTTGACCTGAGCCACAACCAGCTGTCCCGCAAGATACCTCCAGAGATTTCAAACTGCTCATCGCTTGTCACTCTCAAGCTTGATGACAATCATCTTGGTGGCGAGATACCGGCCTCTCTCTCCAACCTGTCGAAGCTGCAGACACTTGACCTGTCGTCCAACAATCTTACCGGCAGCATCCCTGCTTCATTGGCTCAAATTCCAGGCATGCTATCACTCAATGTGTCACAAAATGAGCTCAGCGGAGAGATACCGGCAATGCTTGGCTCCCGCTTTGGCACCCCGTCAGTGTTTGCTTCCAACCCGAACCTGTGCGGTCCGCCATTGGAGAACGAATGCAGTGCGTACCGGCAGCATCGGAGGCGGCAGAGGCTGCAGCGCCTCGCTCTGCTGATTGGTGTGGTGGCTGCTACCGTGCTGCTGCTTGTGCTGTTCTGCTGCTGCTGTGTGTACAGCTTGCTGCGGTGGAGGCGCCGGTTCATTGAGAAGCGAGATGGTGTCAAGAAGAGGCGGCGCAGCCCGGGACGGGGCAGCGGGTCGAGCGGCACAAGCACAGACAGTGTCAGCCAGCCGAAGCTGATCATGTTCAATTCCCGGATCACCTATGCTGACACGGTGGAGGCGACGAGGCAGTTCGATGAGGAGAATGTGCTTAGCCGAGGCCGCCATGGTCTCGTGTTCAAGGCTTGCTACAATGACGGCACCGTGCTGGCGATCCTACGGCTTCCTTCCACCTCATCTGATGGCGCCGTGGTGATTGAGGAGGGCTCGTTCAGGAAGGAGGCCGAGTCCCTCGGCAAGGTGAAGCACAGGAACCTCACTGTGCTCCGTGGCTATTACGCCGGGCCGCCGCCAGATGTTCGGCTGCTGGTCTATGACTACATGCCCAACGGCAACCTCGCCACGTTGCTGCAGGAAGCGTCGCACCAAGACGGACACATTCTCAATTGGCCAATGAGGCACCTGATCGCCCTCGGCGTCTCCCGCGGCCTTGCTTTTCTCCACCAGTCCGGTGTCGTGCACGGCGACGTCAAGCCGCAGAACATCCTCTTCGATGCCGACTTCGAGCCGCACCTGTCCGACTTCGGGCTGGAGCCAATGGTGGTGACGGCTGGTGCTGCCGCTGCTGCGGCGGCTGCATCGACGTCAGCTACAACAACAGTCGGTTCGCTCGGCTACGTCGCCCCGGACGCCGCGGCCGCGGGTCAGGCCACGCGGGAAGGCGACGTCTACAGCTTCGGCATCGTGCTGCTCGAGCTGCTCACCGGCCGGCGCCCCGGCATGTTCGCCGGGGAGGACGAAGACATCGTGAAGTGGGTGAAGCGTCAGCTGCAGCGCGGGGCGGTGGCCGAGCTGCTCGAGCCGGGCCTGCTGGAGCTGGACCCGGAGTCGTCGGAGTGGGAGGAGTTCCTGCTCGGGATCAAGGTCGGCCTCCTCTGCACGGCGCCCGACCCGCTGGACCGCCCGGCCATGGGCGACGTGGTGTTCATGCTCGAGGGCTGCCGCGTCGGCCCGGACATCCCGTCGTCGGCCGACCCAACCTCCCAGCCATCCCCGGCGTGATCGCCGGCTCCCCTCGGCCGGCGGCATCACCCGATCCAGTCCACTAGTGTTGTTCCATCCATTTTCCGCTAATTCTTTCTTCTTTAGTTCAGATTAGTCTTAGCTTCATCCAGCCGCGGGGTCAAAACTGACATGTGAGCCCGGGAGCAAGAACACCTGCATTTCCCGCCAAGCAGACCAGAGGCTTGGCCCCAAGTGGGAAAGTAGCCGTTGAGCCCCTTCCTAATCTCGCGGTTAGTGGAGGTGTCAGTGGCTGCCGGGGAAGCAAATCACCATGTGGACTGATGCTTGCGCGGCATGTTGCGGAGGAGGAGGTTGGTGGTGGTGGCGTCGTGGACTCGCGCATGTGGGGTTCCCCATCGCAACGGCTACTGATGCTCCATCTGTTCTTGGCTGCTCTGTACCCTGTACTCCCTTCTCTCTCTCTCTAGGAAATTGATTTCGTGTAGGGGGGCCTGCTTGGCTTCTTCGGATCTTGTCTTTTATTAATCTCCATTTTTTACCATGGGCTTAGATCTTTTGTAATGTTGTGATGTACATCTTGTCTGTATTTTGTTATCCCAATTGGTTCAAGAGGATGGTGGGGGATGAATGATGCTTCATACTACTAGCCGTTAAATCTTTTTTTCCCCTCTGCATGGAATGATTTGTGTATGGCAGTATCTAGCAGTAGTACATCCAAAATACTCTGTGCACTTGTTTTATCCACTGTATGATTAGTTGGGGACCCTACCTATCTATCGGATGAATGGATATATATTACTCTGTGGTCA
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| CDS seq | ATGCCGCCGCCGCCAAGGCTGCTGTTCTTGCTCGTCATGCTGCTGGTGGTCGCGGCGCCCGGCGCGCCGGTGTTCGGGGCGAACGCGCCGCCGGAGGTGAAGGCGGAGATCGACGCGCTACTCATGTTCCGGAGCGGGCTGCGCGACCCTTACGCCGCCATGTCCGGGTGGAACGCGTCCTCGCCGTCCGCGCCCTGCTCCTGGCGCGGCGTGGCGTGTGCGGCCGGCACCGGCCGCGTCGTCGAGCTGGCGCTCCCGAAACTCCGCCTGTCCGGCGCCATCTCCCCGGCGCTGTCATCGCTCACGTTCGACGTGTCCGGCAACCTCTTGTCCGGCCCTGTCCCTGTTTCCTTCCCTCCCAGCTTGAAGTACCTTGACCTCTCCTCCAATGCCTTCTCCGGCACCATCCCGGCGAACGTCAGCGCGTCGGCGACGAGCCTCCAGTTCTTGAACCTGTCATTCAACCGCCTCCGGGGCACAGTCCCGGCGTCGCTGGGGACCTTGCAGGACCTGCATTACCTCTGGCTGGACGGGAACCTGCTTGAGGGCACCATCCCGTCGGCGCTGTCCAACTGCTCGGCGCTGCTCCACCTCAGCCTGCAGGGGAATGCGCTCCGCGGCATCTTGCCGCCCGCGGTGGCGGCGATTCCCTCGCTGCAGATTCTTTCGGTGTCTCGGAACCGGCTCACCGGCGCCATCCCGGCTGCGGCGTTCGGCGGCGTGGGGAACTCGTCGCTGCGCATCGTGCAGGTCGGCGGCAACGCGTTCTCCCAGGTGGACGTGCCGGTGTCGCTCGGCAAGGATCTCCAGGTGGTGGACTTGAGGGCCAACAAACTGGCCGGCCCATTCCCGTCCTGGCTCGCCGGGGCTGGGGGGTTGACGGTGCTCGACCTTTCGGGCAATGCGTTCACCGGCGAAGTACCTCCGGCGGTCGGGCAGCTCACTGCGCTGCAGGAACTGCGGCTTGGCGGCAATGCCTTCACAGGCACCGTGCCGGCGGAGATTGGCAGATGCGGTGCGCTCCAGGTGCTTGATCTCGAAGACAACCGCTTCTCCGGCGAGGTACCTGCCGCTCTTGGCGGTCTCCGGCGGCTCAGAGAGGTGTATCTTGGCGGTAACTCATTCTCCGGCCAGATTCCGGCCAGTTTGGGCAACCTCTCGTGGCTGGAAGCATTGTCCACACCGGGGAATCGGCTCACCGGCGATTTGCCCAGTGAGCTCTTCGTGCTGGGGAATCTGACATTCTTGGACCTCTCCGACAACAAGCTCGCCGGGGAGATCCCTCCTTCCATCGGCAATCTGGCCGCTCTGCAGAGTTTAAATTTGAGCGGCAACTCCTTCTCCGGCCGCATTCCGTCCAACATTGGCAACCTGCTGAACCTGAGAGTTCTTGACCTCTCTGGTCAGAAGAACCTCTCGGGCAATCTCCCGGCAGAGCTCTTCGGTTTGCCACAGCTGCAGTATGTGTCGCTCGCCGGAAACTCTTTCTCCGGTGATGTTCCGGAGGGGTTCAGCAGCCTGTGGAGTCTGCGCCACCTCAACCTCTCGGTGAACTCATTCACAGGCTCAATGCCGGCTACCTATGGATACTTGCCATCACTCCAGGTGCTCTCGGCCTCCCACAACCGCATCTGCGGTGAGCTGCCTGTGGAGCTCGCCAACTGTTCCAACCTCACCGTGCTTGATCTCAGGAGCAACCAGTTGACTGGCCCAATCCCCGGTGATTTTGCGCGCCTCGGCGAATTGGAGGAGCTTGACCTGAGCCACAACCAGCTGTCCCGCAAGATACCTCCAGAGATTTCAAACTGCTCATCGCTTGTCACTCTCAAGCTTGATGACAATCATCTTGGTGGCGAGATACCGGCCTCTCTCTCCAACCTGTCGAAGCTGCAGACACTTGACCTGTCGTCCAACAATCTTACCGGCAGCATCCCTGCTTCATTGGCTCAAATTCCAGGCATGCTATCACTCAATGTGTCACAAAATGAGCTCAGCGGAGAGATACCGGCAATGCTTGGCTCCCGCTTTGGCACCCCGTCAGTGTTTGCTTCCAACCCGAACCTGTGCGGTCCGCCATTGGAGAACGAATGCAGTGCGTACCGGCAGCATCGGAGGCGGCAGAGGCTGCAGCGCCTCGCTCTGCTGATTGGTGTGGTGGCTGCTACCGTGCTGCTGCTTGTGCTGTTCTGCTGCTGCTGTGTGTACAGCTTGCTGCGGTGGAGGCGCCGGTTCATTGAGAAGCGAGATGGTGTCAAGAAGAGGCGGCGCAGCCCGGGACGGGGCAGCGGGTCGAGCGGCACAAGCACAGACAGTGTCAGCCAGCCGAAGCTGATCATGTTCAATTCCCGGATCACCTATGCTGACACGGTGGAGGCGACGAGGCAGTTCGATGAGGAGAATGTGCTTAGCCGAGGCCGCCATGGTCTCGTGTTCAAGGCTTGCTACAATGACGGCACCGTGCTGGCGATCCTACGGCTTCCTTCCACCTCATCTGATGGCGCCGTGGTGATTGAGGAGGGCTCGTTCAGGAAGGAGGCCGAGTCCCTCGGCAAGGTGAAGCACAGGAACCTCACTGTGCTCCGTGGCTATTACGCCGGGCCGCCGCCAGATGTTCGGCTGCTGGTCTATGACTACATGCCCAACGGCAACCTCGCCACGTTGCTGCAGGAAGCGTCGCACCAAGACGGACACATTCTCAATTGGCCAATGAGGCACCTGATCGCCCTCGGCGTCTCCCGCGGCCTTGCTTTTCTCCACCAGTCCGGTGTCGTGCACGGCGACGTCAAGCCGCAGAACATCCTCTTCGATGCCGACTTCGAGCCGCACCTGTCCGACTTCGGGCTGGAGCCAATGGTGGTGACGGCTGGTGCTGCCGCTGCTGCGGCGGCTGCATCGACGTCAGCTACAACAACAGTCGGTTCGCTCGGCTACGTCGCCCCGGACGCCGCGGCCGCGGGTCAGGCCACGCGGGAAGGCGACGTCTACAGCTTCGGCATCGTGCTGCTCGAGCTGCTCACCGGCCGGCGCCCCGGCATGTTCGCCGGGGAGGACGAAGACATCGTGAAGTGGGTGAAGCGTCAGCTGCAGCGCGGGGCGGTGGCCGAGCTGCTCGAGCCGGGCCTGCTGGAGCTGGACCCGGAGTCGTCGGAGTGGGAGGAGTTCCTGCTCGGGATCAAGGTCGGCCTCCTCTGCACGGCGCCCGACCCGCTGGACCGCCCGGCCATGGGCGACGTGGTGTTCATGCTCGAGGGCTGCCGCGTCGGCCCGGACATCCCGTCGTCGGCCGACCCAACCTCCCAGCCATCCCCGGCGTGA
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| Protein seq | MPPPPRLLFLLVMLLVVAAPGAPVFGANAPPEVKAEIDALLMFRSGLRDPYAAMSGWNASSPSAPCSWRGVACAAGTGRVVELALPKLRLSGAISPALSSLTFDVSGNLLSGPVPVSFPPSLKYLDLSSNAFSGTIPANVSASATSLQFLNLSFNRLRGTVPASLGTLQDLHYLWLDGNLLEGTIPSALSNCSALLHLSLQGNALRGILPPAVAAIPSLQILSVSRNRLTGAIPAAAFGGVGNSSLRIVQVGGNAFSQVDVPVSLGKDLQVVDLRANKLAGPFPSWLAGAGGLTVLDLSGNAFTGEVPPAVGQLTALQELRLGGNAFTGTVPAEIGRCGALQVLDLEDNRFSGEVPAALGGLRRLREVYLGGNSFSGQIPASLGNLSWLEALSTPGNRLTGDLPSELFVLGNLTFLDLSDNKLAGEIPPSIGNLAALQSLNLSGNSFSGRIPSNIGNLLNLRVLDLSGQKNLSGNLPAELFGLPQLQYVSLAGNSFSGDVPEGFSSLWSLRHLNLSVNSFTGSMPATYGYLPSLQVLSASHNRICGELPVELANCSNLTVLDLRSNQLTGPIPGDFARLGELEELDLSHNQLSRKIPPEISNCSSLVTLKLDDNHLGGEIPASLSNLSKLQTLDLSSNNLTGSIPASLAQIPGMLSLNVSQNELSGEIPAMLGSRFGTPSVFASNPNLCGPPLENECSAYRQHRRRQRLQRLALLIGVVAATVLLLVLFCCCCVYSLLRWRRRFIEKRDGVKKRRRSPGRGSGSSGTSTDSVSQPKLIMFNSRITYADTVEATRQFDEENVLSRGRHGLVFKACYNDGTVLAILRLPSTSSDGAVVIEEGSFRKEAESLGKVKHRNLTVLRGYYAGPPPDVRLLVYDYMPNGNLATLLQEASHQDGHILNWPMRHLIALGVSRGLAFLHQSGVVHGDVKPQNILFDADFEPHLSDFGLEPMVVTAGAAAAAAAASTSATTTVGSLGYVAPDAAAAGQATREGDVYSFGIVLLELLTGRRPGMFAGEDEDIVKWVKRQLQRGAVAELLEPGLLELDPESSEWEEFLLGIKVGLLCTAPDPLDRPAMGDVVFMLEGCRVGPDIPSSADPTSQPSPA |
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| Function | Probable inactive leucine-rich repeat receptor kinase XIAO [UniProtKB/Swiss-Prot:G9LZD7] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os04g48760 | LOC_Os04g48760.1 | Chr04 | 29082343 | 29086795 | + | MSU_osa1r7 | ||
| CDS seq | ATGCCGCCGCCGCCAAGGCTGCTGTTCTTGCTCGTCATGCTGCTGGTGGTCGCGGCGCCCGGCGCGCCGGTGTTCGGGGCGAACGCGCCGCCGGAGGTGAAGGCGGAGATCGACGCGCTACTCATGTTCCGGAGCGGGCTGCGCGACCCTTACGCCGCCATGTCCGGGTGGAACGCGTCCTCGCCGTCCGCGCCCTGCTCCTGGCGCGGCGTGGCGTGTGCGGCCGGCACCGGCCGCGTCGTCGAGCTGGCGCTCCCGAAACTCCGCCTGTCCGGCGCCATCTCCCCGGCGCTGTCATCGCTCACGTTCGACGTGTCCGGCAACCTCTTGTCCGGCCCTGTCCCTGTTTCCTTCCCTCCCAGCTTGAAGTACCTTGACCTCTCCTCCAATGCCTTCTCCGGCACCATCCCGGCGAACGTCAGCGCGTCGGCGACGAGCCTCCAGTTCTTGAACCTGTCATTCAACCGCCTCCGGGGCACAGTCCCGGCGTCGCTGGGGACCTTGCAGGACCTGCATTACCTCTGGCTGGACGGGAACCTGCTTGAGGGCACCATCCCGTCGGCGCTGTCCAACTGCTCGGCGCTGCTCCACCTCAGCCTGCAGGGGAATGCGCTCCGCGGCATCTTGCCGCCCGCGGTGGCGGCGATTCCCTCGCTGCAGATTCTTTCGGTGTCTCGGAACCGGCTCACCGGCGCCATCCCGGCTGCGGCGTTCGGCGGCGTGGGGAACTCGTCGCTGCGCATCGTGCAGGTCGGCGGCAACGCGTTCTCCCAGGTGGACGTGCCGGTGTCGCTCGGCAAGGATCTCCAGGTGGTGGACTTGAGGGCCAACAAACTGGCCGGCCCATTCCCGTCCTGGCTCGCCGGGGCTGGGGGGTTGACGGTGCTCGACCTTTCGGGCAATGCGTTCACCGGCGAAGTACCTCCGGCGGTCGGGCAGCTCACTGCGCTGCAGGAACTGCGGCTTGGCGGCAATGCCTTCACAGGCACCGTGCCGGCGGAGATTGGCAGATGCGGTGCGCTCCAGGTGCTTGATCTCGAAGACAACCGCTTCTCCGGCGAGGTACCTGCCGCTCTTGGCGGTCTCCGGCGGCTCAGAGAGGTGTATCTTGGCGGTAACTCATTCTCCGGCCAGATTCCGGCCAGTTTGGGCAACCTCTCGTGGCTGGAAGCATTGTCCACACCGGGGAATCGGCTCACCGGCGATTTGCCCAGTGAGCTCTTCGTGCTGGGGAATCTGACATTCTTGGACCTCTCCGACAACAAGCTCGCCGGGGAGATCCCTCCTTCCATCGGCAATCTGGCCGCTCTGCAGAGTTTAAATTTGAGCGGCAACTCCTTCTCCGGCCGCATTCCGTCCAACATTGGCAACCTGCTGAACCTGAGAGTTCTTGACCTCTCTGGTCAGAAGAACCTCTCGGGCAATCTCCCGGCAGAGCTCTTCGGTTTGCCACAGCTGCAGTATGTGTCGCTCGCCGGAAACTCTTTCTCCGGTGATGTTCCGGAGGGGTTCAGCAGCCTGTGGAGTCTGCGCCACCTCAACCTCTCGGTGAACTCATTCACAGGCTCAATGCCGGCTACCTATGGATACTTGCCATCACTCCAGGTGCTCTCGGCCTCCCACAACCGCATCTGCGGTGAGCTGCCTGTGGAGCTCGCCAACTGTTCCAACCTCACCGTGCTTGATCTCAGGAGCAACCAGTTGACTGGCCCAATCCCCGGTGATTTTGCGCGCCTCGGCGAATTGGAGGAGCTTGACCTGAGCCACAACCAGCTGTCCCGCAAGATACCTCCAGAGATTTCAAACTGCTCATCGCTTGTCACTCTCAAGCTTGATGACAATCATCTTGGTGGCGAGATACCGGCCTCTCTCTCCAACCTGTCGAAGCTGCAGACACTTGACCTGTCGTCCAACAATCTTACCGGCAGCATCCCTGCTTCATTGGCTCAAATTCCAGGCATGCTATCACTCAATGTGTCACAAAATGAGCTCAGCGGAGAGATACCGGCAATGCTTGGCTCCCGCTTTGGCACCCCGTCAGTGTTTGCTTCCAACCCGAACCTGTGCGGTCCGCCATTGGAGAACGAATGCAGTGCGTACCGGCAGCATCGGAGGCGGCAGAGGCTGCAGCGCCTCGCTCTGCTGATTGGTGTGGTGGCTGCTACCGTGCTGCTGCTTGTGCTGTTCTGCTGCTGCTGTGTGTACAGCTTGCTGCGGTGGAGGCGCCGGTTCATTGAGAAGCGAGATGGTGTCAAGAAGAGGCGGCGCAGCCCGGGACGGGGCAGCGGGTCGAGCGGCACAAGCACAGACAGTGTCAGCCAGCCGAAGCTGATCATGTTCAATTCCCGGATCACCTATGCTGACACGGTGGAGGCGACGAGGCAGTTCGATGAGGAGAATGTGCTTAGCCGAGGCCGCCATGGTCTCGTGTTCAAGGCTTGCTACAATGACGGCACCGTGCTGGCGATCCTACGGCTTCCTTCCACCTCATCTGATGGCGCCGTGGTGATTGAGGAGGGCTCGTTCAGGAAGGAGGCCGAGTCCCTCGGCAAGGTGAAGCACAGGAACCTCACTGTGCTCCGTGGCTATTACGCCGGGCCGCCGCCAGATGTTCGGCTGCTGGTCTATGACTACATGCCCAACGGCAACCTCGCCACGTTGCTGCAGGAAGCGTCGCACCAAGACGGACACATTCTCAATTGGCCAATGAGGCACCTGATCGCCCTCGGCGTCTCCCGCGGCCTTGCTTTTCTCCACCAGTCCGGTGTCGTGCACGGCGACGTCAAGCCGCAGAACATCCTCTTCGATGCCGACTTCGAGCCGCACCTGTCCGACTTCGGGCTGGAGCCAATGGTGGTGACGGCTGGTGCTGCCGCTGCTGCGGCGGCTGCATCGACGTCAGCTACAACAACAGTCGGTTCGCTCGGCTACGTCGCCCCGGACGCCGCGGCCGCGGGTCAGGCCACGCGGGAAGGCGACGTCTACAGCTTCGGCATCGTGCTGCTCGAGCTGCTCACCGGCCGGCGCCCCGGCATGTTCGCCGGGGAGGACGAAGACATCGTGAAGTGGGTGAAGCGTCAGCTGCAGCGCGGGGCGGTGGCCGAGCTGCTCGAGCCGGGCCTGCTGGAGCTGGACCCGGAGTCGTCGGAGTGGGAGGAGTTCCTGCTCGGGATCAAGGTCGGCCTCCTCTGCACGGCGCCCGACCCGCTGGACCGCCCGGCCATGGGCGACGTGGTGTTCATGCTCGAGGGCTGCCGCGTCGGCCCGGACATCCCGTCGTCGGCCGACCCAACCTCCCAGCCATCCCCGGCGTGA
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| Protein seq | MPPPPRLLFLLVMLLVVAAPGAPVFGANAPPEVKAEIDALLMFRSGLRDPYAAMSGWNASSPSAPCSWRGVACAAGTGRVVELALPKLRLSGAISPALSSLTFDVSGNLLSGPVPVSFPPSLKYLDLSSNAFSGTIPANVSASATSLQFLNLSFNRLRGTVPASLGTLQDLHYLWLDGNLLEGTIPSALSNCSALLHLSLQGNALRGILPPAVAAIPSLQILSVSRNRLTGAIPAAAFGGVGNSSLRIVQVGGNAFSQVDVPVSLGKDLQVVDLRANKLAGPFPSWLAGAGGLTVLDLSGNAFTGEVPPAVGQLTALQELRLGGNAFTGTVPAEIGRCGALQVLDLEDNRFSGEVPAALGGLRRLREVYLGGNSFSGQIPASLGNLSWLEALSTPGNRLTGDLPSELFVLGNLTFLDLSDNKLAGEIPPSIGNLAALQSLNLSGNSFSGRIPSNIGNLLNLRVLDLSGQKNLSGNLPAELFGLPQLQYVSLAGNSFSGDVPEGFSSLWSLRHLNLSVNSFTGSMPATYGYLPSLQVLSASHNRICGELPVELANCSNLTVLDLRSNQLTGPIPGDFARLGELEELDLSHNQLSRKIPPEISNCSSLVTLKLDDNHLGGEIPASLSNLSKLQTLDLSSNNLTGSIPASLAQIPGMLSLNVSQNELSGEIPAMLGSRFGTPSVFASNPNLCGPPLENECSAYRQHRRRQRLQRLALLIGVVAATVLLLVLFCCCCVYSLLRWRRRFIEKRDGVKKRRRSPGRGSGSSGTSTDSVSQPKLIMFNSRITYADTVEATRQFDEENVLSRGRHGLVFKACYNDGTVLAILRLPSTSSDGAVVIEEGSFRKEAESLGKVKHRNLTVLRGYYAGPPPDVRLLVYDYMPNGNLATLLQEASHQDGHILNWPMRHLIALGVSRGLAFLHQSGVVHGDVKPQNILFDADFEPHLSDFGLEPMVVTAGAAAAAAAASTSATTTVGSLGYVAPDAAAAGQATREGDVYSFGIVLLELLTGRRPGMFAGEDEDIVKWVKRQLQRGAVAELLEPGLLELDPESSEWEEFLLGIKVGLLCTAPDPLDRPAMGDVVFMLEGCRVGPDIPSSADPTSQPSPA
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.125145 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0576900 | RBH | 0.0 | 0.0 | 0.627554 |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0576900 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0023880 | RBH | 0.0 | 9.168246 | 2.150215 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0024610 | RBH | 0.0 | 5.404966 | 0.429685 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0024340 | RBH | 0.0 | 10.487705 | 1.731756 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0024100 | RBH | 0.0 | 0.464207 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0024230 | RBH | 0.0 | 12.319561 | 4.053517 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0456800 | RBH | 1.108605 | 3.270993 | 0.9435275 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0023040 | RBH | 0.0 | 0.697488 | 0.265430 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0460900 | RBH | 1.0550405 | 0.1643495 | 9.382622 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0023510 | RBH | 0.0 | 0.280288 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0023350 | RBH | 0.0 | 9.859448 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0023480 | RBH | 0.0 | 12.714071 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0023870 | RBH | 0.0 | 1.092127 | 0.249885 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0024080 | RBH | 0.0 | 8.104649 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G023300 | RBH | 0.0 | 2.293958 | 2.431715 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0023220 | RBH | 0.0 | 9.760620 | 0.969032 |
