Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os04g47770 | OGI:04083180 | 16/16 | Nipponbare | IRGSP 1.0 | MSU | Chr04:28336572-28338358 | ||||||||
| Gene Symbol | CZOGT3, OscZOGT3, cZOGT3 | ||||||||||
| DNA seq | TGGGCAGCGGCCAATTACGTTTCGTTAGTCGTTAAAACAGTTAACACCTTTCAGGCTTCATTCAGACTTCAGCTCAGTCATTCAGGCATTGAGAGGCACGGAGAATGGCAGAGAAGGGGAACCCGGCGAACAAGGTGGCCATCGTGGCGGTGCCGTTCCCGGCGCAGGGTCACCTCAACCAGGTGCTGCACCTGTCGCTCCAGCTCGCGTCGTCGTCGCACGGGCTCGCGGTCCACTACGCTGCGCCGGCGCCGCAGCTCCGCCAGGCGCGGGCGCGCGTGCACGGCTGGGACGACAAGGCCCTCCTCTCCGTCCAGTTCCACGACCTCGGCATCTCCACGTACGTCTCTCCGCCTCCCGACCCCACCGCCGACACGCCCTTCCCCTCCCACCTCATGCCCCTCTGGGAGGCGTACACCGCGGACGCGCGCGCCCCGCTCTCGGCGCTCCTTGACGAGCTATCCGCTTCCCACCGTCGGGTCGTCGTCGTGTGCGACACCATCAATTCCTTCGCTGTCGAGGAGGCGGCGCGGCTGCCCAACGGTGAGGCGTTCCCGGTGAGCTGCGTAGCCGTGTCGGCCCTCGCCCTTCACATAGACACCGGGCATCGGCTCCTGCGTGAGAACGGCCTCAATCATGCCCCCTTGGAAACCTACATGACGCAGGAGTTCCTGGACTACGCGAGCGAACGTGCCCGAGCGTCGGAATCGATTTTGTCCGGCGCCGGCATCCTCGCGAACGCGAGCCGAGCACTCGAGGGCGATTTCATCGACGATTTGGCTGAGACTCTGGCTGCCGGCGGCAAGAAGCTCTTCGCAATCGGTCCGTTGAACCCACTGCTCAACACGGGCTCGTCGGAGCAGGGCAGGCGGCGACACGAGTGCCTTGACTGGCTCGACAGGCAGCCCCCGGATTCTGTGCTCTACGTGTCGTTCGGCACGACGTGCTCTCTTCGAGTTGAGCAGGTCGCGGAGCTCGCAGCGACACTGCGCGGCAGCAAGCAGCGGTTCATCTGGGTCATGCGCGACGCCGACCGCGGCAACATATTCACGGACACCGGCGAGGGCGAGACCCGGCACGCCAAGCTTCTGTCCGAGTTCTCCAAGCAAACCGAAGGCACGGGGATGGTGATCACTGGGTGGGCGCCGCAGCTGGAGATCCTGGCGCACGGCGCCACGGCGGCGTTCATGAGCCACTGCGGCTGGAACTCGACCATGGAGAGCATGAGCCACGGGAAGCCGATTCTGGCGTGGCCCATGCACTCCGACCAGCCGTGGGACGCGGAGCTGGTGTGCAAATACTTCAAGGCAGGTCTCCTAGTGAGGCCATGGGAGAAGCACGGCGAGGTTTTGCCGGCGGCCACTATACAGGAGGTGATCAAGAAGATGATGGCCTCCGATGAAGGATTGGCGGTGCGGCAGCGCGCGAAGGCGCTCGGTGATGCCGTCCGTTCATCGCGCAATGATCTGGAGGACTTCATTGCTCACATCACAAGGTGATCGAAGAATAACCCCGTGTCAAAAAAAAATACAGCTTTAAACTTTTTCAGTAGTAGCAGTTTGTATTGAATTTGACTATTTGAGTTAAGCAGGGTCTAGTAAAATAGTTGACTATTTGAGTTAAGCAGGGTCTAGTAAAATAGTTTTCAGTCCTACAAATCAAGTGACTCTATGGTTGAATCAAATAAACATATGGTGGTGTAAACTTGGGGATATCAGATATCCAACTATTTCCATTGAGTAATTTTATCATCCTTAAAAAGTACTGTAAAATTCCTCATTTTCATT
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| CDS seq | ATGGCAGAGAAGGGGAACCCGGCGAACAAGGTGGCCATCGTGGCGGTGCCGTTCCCGGCGCAGGGTCACCTCAACCAGGTGCTGCACCTGTCGCTCCAGCTCGCGTCGTCGTCGCACGGGCTCGCGGTCCACTACGCTGCGCCGGCGCCGCAGCTCCGCCAGGCGCGGGCGCGCGTGCACGGCTGGGACGACAAGGCCCTCCTCTCCGTCCAGTTCCACGACCTCGGCATCTCCACGTACGTCTCTCCGCCTCCCGACCCCACCGCCGACACGCCCTTCCCCTCCCACCTCATGCCCCTCTGGGAGGCGTACACCGCGGACGCGCGCGCCCCGCTCTCGGCGCTCCTTGACGAGCTATCCGCTTCCCACCGTCGGGTCGTCGTCGTGTGCGACACCATCAATTCCTTCGCTGTCGAGGAGGCGGCGCGGCTGCCCAACGGTGAGGCGTTCCCGGTGAGCTGCGTAGCCGTGTCGGCCCTCGCCCTTCACATAGACACCGGGCATCGGCTCCTGCGTGAGAACGGCCTCAATCATGCCCCCTTGGAAACCTACATGACGCAGGAGTTCCTGGACTACGCGAGCGAACGTGCCCGAGCGTCGGAATCGATTTTGTCCGGCGCCGGCATCCTCGCGAACGCGAGCCGAGCACTCGAGGGCGATTTCATCGACGATTTGGCTGAGACTCTGGCTGCCGGCGGCAAGAAGCTCTTCGCAATCGGTCCGTTGAACCCACTGCTCAACACGGGCTCGTCGGAGCAGGGCAGGCGGCGACACGAGTGCCTTGACTGGCTCGACAGGCAGCCCCCGGATTCTGTGCTCTACGTGTCGTTCGGCACGACGTGCTCTCTTCGAGTTGAGCAGGTCGCGGAGCTCGCAGCGACACTGCGCGGCAGCAAGCAGCGGTTCATCTGGGTCATGCGCGACGCCGACCGCGGCAACATATTCACGGACACCGGCGAGGGCGAGACCCGGCACGCCAAGCTTCTGTCCGAGTTCTCCAAGCAAACCGAAGGCACGGGGATGGTGATCACTGGGTGGGCGCCGCAGCTGGAGATCCTGGCGCACGGCGCCACGGCGGCGTTCATGAGCCACTGCGGCTGGAACTCGACCATGGAGAGCATGAGCCACGGGAAGCCGATTCTGGCGTGGCCCATGCACTCCGACCAGCCGTGGGACGCGGAGCTGGTGTGCAAATACTTCAAGGCAGGTCTCCTAGTGAGGCCATGGGAGAAGCACGGCGAGGTTTTGCCGGCGGCCACTATACAGGAGGTGATCAAGAAGATGATGGCCTCCGATGAAGGATTGGCGGTGCGGCAGCGCGCGAAGGCGCTCGGTGATGCCGTCCGTTCATCGCGCAATGATCTGGAGGACTTCATTGCTCACATCACAAGGTGA
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| Protein seq | MAEKGNPANKVAIVAVPFPAQGHLNQVLHLSLQLASSSHGLAVHYAAPAPQLRQARARVHGWDDKALLSVQFHDLGISTYVSPPPDPTADTPFPSHLMPLWEAYTADARAPLSALLDELSASHRRVVVVCDTINSFAVEEAARLPNGEAFPVSCVAVSALALHIDTGHRLLRENGLNHAPLETYMTQEFLDYASERARASESILSGAGILANASRALEGDFIDDLAETLAAGGKKLFAIGPLNPLLNTGSSEQGRRRHECLDWLDRQPPDSVLYVSFGTTCSLRVEQVAELAATLRGSKQRFIWVMRDADRGNIFTDTGEGETRHAKLLSEFSKQTEGTGMVITGWAPQLEILAHGATAAFMSHCGWNSTMESMSHGKPILAWPMHSDQPWDAELVCKYFKAGLLVRPWEKHGEVLPAATIQEVIKKMMASDEGLAVRQRAKALGDAVRSSRNDLEDFIAHITR |
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| Function | Putative cis-zeatin O-glucosyltransferase [UniProtKB/Swiss-Prot:Q6JAH0] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os04g47770 | LOC_Os04g47770.1 | Chr04 | 28336572 | 28338358 | + | MSU_osa1r7 | ||
| CDS seq | ATGGCAGAGAAGGGGAACCCGGCGAACAAGGTGGCCATCGTGGCGGTGCCGTTCCCGGCGCAGGGTCACCTCAACCAGGTGCTGCACCTGTCGCTCCAGCTCGCGTCGTCGTCGCACGGGCTCGCGGTCCACTACGCTGCGCCGGCGCCGCAGCTCCGCCAGGCGCGGGCGCGCGTGCACGGCTGGGACGACAAGGCCCTCCTCTCCGTCCAGTTCCACGACCTCGGCATCTCCACGTACGTCTCTCCGCCTCCCGACCCCACCGCCGACACGCCCTTCCCCTCCCACCTCATGCCCCTCTGGGAGGCGTACACCGCGGACGCGCGCGCCCCGCTCTCGGCGCTCCTTGACGAGCTATCCGCTTCCCACCGTCGGGTCGTCGTCGTGTGCGACACCATCAATTCCTTCGCTGTCGAGGAGGCGGCGCGGCTGCCCAACGGTGAGGCGTTCCCGGTGAGCTGCGTAGCCGTGTCGGCCCTCGCCCTTCACATAGACACCGGGCATCGGCTCCTGCGTGAGAACGGCCTCAATCATGCCCCCTTGGAAACCTACATGACGCAGGAGTTCCTGGACTACGCGAGCGAACGTGCCCGAGCGTCGGAATCGATTTTGTCCGGCGCCGGCATCCTCGCGAACGCGAGCCGAGCACTCGAGGGCGATTTCATCGACGATTTGGCTGAGACTCTGGCTGCCGGCGGCAAGAAGCTCTTCGCAATCGGTCCGTTGAACCCACTGCTCAACACGGGCTCGTCGGAGCAGGGCAGGCGGCGACACGAGTGCCTTGACTGGCTCGACAGGCAGCCCCCGGATTCTGTGCTCTACGTGTCGTTCGGCACGACGTGCTCTCTTCGAGTTGAGCAGGTCGCGGAGCTCGCAGCGACACTGCGCGGCAGCAAGCAGCGGTTCATCTGGGTCATGCGCGACGCCGACCGCGGCAACATATTCACGGACACCGGCGAGGGCGAGACCCGGCACGCCAAGCTTCTGTCCGAGTTCTCCAAGCAAACCGAAGGCACGGGGATGGTGATCACTGGGTGGGCGCCGCAGCTGGAGATCCTGGCGCACGGCGCCACGGCGGCGTTCATGAGCCACTGCGGCTGGAACTCGACCATGGAGAGCATGAGCCACGGGAAGCCGATTCTGGCGTGGCCCATGCACTCCGACCAGCCGTGGGACGCGGAGCTGGTGTGCAAATACTTCAAGGCAGGTCTCCTAGTGAGGCCATGGGAGAAGCACGGCGAGGTTTTGCCGGCGGCCACTATACAGGAGGTGATCAAGAAGATGATGGCCTCCGATGAAGGATTGGCGGTGCGGCAGCGCGCGAAGGCGCTCGGTGATGCCGTCCGTTCATCGCGCAATGATCTGGAGGACTTCATTGCTCACATCACAAGGTGA
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| Protein seq | MAEKGNPANKVAIVAVPFPAQGHLNQVLHLSLQLASSSHGLAVHYAAPAPQLRQARARVHGWDDKALLSVQFHDLGISTYVSPPPDPTADTPFPSHLMPLWEAYTADARAPLSALLDELSASHRRVVVVCDTINSFAVEEAARLPNGEAFPVSCVAVSALALHIDTGHRLLRENGLNHAPLETYMTQEFLDYASERARASESILSGAGILANASRALEGDFIDDLAETLAAGGKKLFAIGPLNPLLNTGSSEQGRRRHECLDWLDRQPPDSVLYVSFGTTCSLRVEQVAELAATLRGSKQRFIWVMRDADRGNIFTDTGEGETRHAKLLSEFSKQTEGTGMVITGWAPQLEILAHGATAAFMSHCGWNSTMESMSHGKPILAWPMHSDQPWDAELVCKYFKAGLLVRPWEKHGEVLPAATIQEVIKKMMASDEGLAVRQRAKALGDAVRSSRNDLEDFIAHITR
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 1.704033 | 1.600439 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0565400 | RBH | 2.646794 | 2.467013 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g42280 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0565400 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0023190 | RBH | 0.225090 | 1.549438 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0023920 | SBH | 0.141449 | 0.653744 | 0.154772 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0023640 | RBH | 0.851973 | 0.0 | 0.000000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0023400 | RBH | 0.168814 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0023510 | RBH | 6.710775 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0445800 | RBH | 1.844259 | 0.218178 | 0.034986 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0022330 | RBH | 0.362683 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0449700 | RBH | 5.0640435 | 0.0579255 | 0.044317 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0022840 | SBH | 0.450377 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0022670 | RBH | 0.879911 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0022790 | RBH | 10.945545 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0023180 | RBH | 0.119882 | 0.0 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0022790 | SBH | 0.753626 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G022590 | RBH | 0.613263 | 0.0 | 0.105108 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0021920 | RBH | 0.584142 | 0.000000 | 0.0 |
