Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os04g46120 | OGI:04081800 | 10/16 | Nipponbare | IRGSP 1.0 | MSU | Chr04:27328770-27329428 | ||||||||
| Gene Symbol | UCL14, OsUCL14 | ||||||||||
| DNA seq | TCACCATACAAACAGGGCTGCAGCGATGATGCACAGCCACGTGGCCACCGCGGGCCCCACCGTCACCCGGTGGGACCCGCCGAGGTCGAGCGTCGGGACGCCCGCGTCGCCGGCCGCGCCGGGGGAGAGGGCGCCGCCGCCGCCCGGGCTCGCCGGCGTCGCGCCGGCCCCGCCCGGTGAGGCCGGCTCGGAGACGGGCACGTGAAGCCTCATGCCGCCGAGGCAGTGCAGCTCGTTGCCGCAGACGAAGTAGCGGTCGCCGGGCGCCGTGAGGGCCACCGTCGTGTTGCCGTCGCTGCTGGAGAGCACCGCGCTGGCCGTGCTGCAGTTCCTGTACCCCGCCTCGTCGACCTCGCTCAACGTGTGGTACTTCGAGTACTGGAACACTGCACCGGCCGATCGATCACAAAAACACAGGTGAGTTGGAGTTGGATAGCATGCAAAATTGCAAACAATCCAAAACTGCTGGTAAATCAAGGGCGCTTACCGAGAGTGTCGCCGACGAAGAACGACTTGCCGTCGAGCCAGGACGGGAAGTCGGCGCTGATGTCCCAGCCGGCGCTGTTGCCGACGTTGTACGACGCCGCCTCGGCTACCCTCGCCGCGCCGCCGTGCACGAGCAGGACGCACACCGCGAGAGCCAGGCAGGATTGAGCCAT
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| CDS seq | ATGGCTCAATCCTGCCTGGCTCTCGCGGTGTGCGTCCTGCTCGTGCACGGCGGCGCGGCGAGGGTAGCCGAGGCGGCGTCGTACAACGTCGGCAACAGCGCCGGCTGGGACATCAGCGCCGACTTCCCGTCCTGGCTCGACGGCAAGTCGTTCTTCGTCGGCGACACTCTCGTGTTCCAGTACTCGAAGTACCACACGTTGAGCGAGGTCGACGAGGCGGGGTACAGGAACTGCAGCACGGCCAGCGCGGTGCTCTCCAGCAGCGACGGCAACACGACGGTGGCCCTCACGGCGCCCGGCGACCGCTACTTCGTCTGCGGCAACGAGCTGCACTGCCTCGGCGGCATGAGGCTTCACGTGCCCGTCTCCGAGCCGGCCTCACCGGGCGGGGCCGGCGCGACGCCGGCGAGCCCGGGCGGCGGCGGCGCCCTCTCCCCCGGCGCGGCCGGCGACGCGGGCGTCCCGACGCTCGACCTCGGCGGGTCCCACCGGGTGACGGTGGGGCCCGCGGTGGCCACGTGGCTGTGCATCATCGCTGCAGCCCTGTTTGTATGGTGA
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| Protein seq | MAQSCLALAVCVLLVHGGAARVAEAASYNVGNSAGWDISADFPSWLDGKSFFVGDTLVFQYSKYHTLSEVDEAGYRNCSTASAVLSSSDGNTTVALTAPGDRYFVCGNELHCLGGMRLHVPVSEPASPGGAGATPASPGGGGALSPGAAGDAGVPTLDLGGSHRVTVGPAVATWLCIIAAALFVW |
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| Function | Uclacyanin-3 [UniProtKB/Swiss-Prot:Q96316] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os04g46120 | LOC_Os04g46120.1 | Chr04 | 27328770 | 27329428 | - | MSU_osa1r7 | ||
| CDS seq | ATGGCTCAATCCTGCCTGGCTCTCGCGGTGTGCGTCCTGCTCGTGCACGGCGGCGCGGCGAGGGTAGCCGAGGCGGCGTCGTACAACGTCGGCAACAGCGCCGGCTGGGACATCAGCGCCGACTTCCCGTCCTGGCTCGACGGCAAGTCGTTCTTCGTCGGCGACACTCTCGTGTTCCAGTACTCGAAGTACCACACGTTGAGCGAGGTCGACGAGGCGGGGTACAGGAACTGCAGCACGGCCAGCGCGGTGCTCTCCAGCAGCGACGGCAACACGACGGTGGCCCTCACGGCGCCCGGCGACCGCTACTTCGTCTGCGGCAACGAGCTGCACTGCCTCGGCGGCATGAGGCTTCACGTGCCCGTCTCCGAGCCGGCCTCACCGGGCGGGGCCGGCGCGACGCCGGCGAGCCCGGGCGGCGGCGGCGCCCTCTCCCCCGGCGCGGCCGGCGACGCGGGCGTCCCGACGCTCGACCTCGGCGGGTCCCACCGGGTGACGGTGGGGCCCGCGGTGGCCACGTGGCTGTGCATCATCGCTGCAGCCCTGTTTGTATGGTGA
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| Protein seq | MAQSCLALAVCVLLVHGGAARVAEAASYNVGNSAGWDISADFPSWLDGKSFFVGDTLVFQYSKYHTLSEVDEAGYRNCSTASAVLSSSDGNTTVALTAPGDRYFVCGNELHCLGGMRLHVPVSEPASPGGAGATPASPGGGGALSPGAAGDAGVPTLDLGGSHRVTVGPAVATWLCIIAAALFVW |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0545400 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g43660 | SBH | 0.0 | 0.0 | 0.175350 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0545400 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0021860 | SBH | 0.0 | 2.345072 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0022600 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0022320 | RBH | 0.0 | 1.992371 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0022070 | RBH | 0.063519 | 0.074516 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0022250 | SBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0430500 | RBH | 0.446172 | 0.4557605 | 0.759038 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0021070 | SBH | 0.0 | 0.095591 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0430900 | RBH | 0.641642 | 0.9299935 | 0.0751195 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0021550 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0021390 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0021480 | RBH | 0.000000 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0021890 | RBH | 0.0 | 0.213340 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0022070 | SBH | 0.0 | 0.669522 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G021320 | SBH | 0.0 | 0.0 | 0.165793 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0021240 | RBH | 0.0 | 0.0 | 0.0 |
