Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os04g41229 | OGI:04074390 | 16/16 | Nipponbare | IRGSP 1.0 | MSU | Chr04:24461146-24468949 | ||||||||
| Gene Symbol | OsbHLH111 | ||||||||||
| DNA seq | ATTTCCGGTCGTCCGATCCCCCCTACCCCTCTCCGCTGATCAGTCGCTCGCTCGCTCGCTGGCTGACTGCGCCCGCGCCCGCTTTGCTGCGCTCCCCCGGCACGCGACGACGAAAAGACCGGCCTCAAAAGCGACACCACGCAGCAGACGCAGCGCCCCCGCGCGGAGAAGCTAGCTAGGTACTCCTGTCTGGTTAGCTAGCTAGCTATAGCTAGAAGCCTAGCACATGAACCCGGCGCCGTCGAGGGCGCCGCAGCGGCAGCAGCGCGGAGGGGAGATGTCGGCGCGCTACGGCGGCGGGCTGCAGTTCTTCGCTGACGCCCCGCCGGCGGGGGTGGAGGGGGGCGCCGCGACCGCGCGGACGTTCTTCCCGGTGCCGGGCGGGGGAGGGGAGCAGCAGCCGCCGGAGCGCGCGATGAGGCAGCAGCACTACGGCGGCGGCGGGAGTGGTGCGGCCGAGATCTCGCTGGGGCACGGCCACGGCCACGGCGGCAAGCACCATTTCCATCAGTTCGGCGTCGAGGCGAAGGACGGTGGCGGCGGCGGCGACCAGTCGGGGTTTCTGACGCGGCACAACAGCTCGCCTCCCGGGTTCTTCTCGAGCCCCGTCATGGACAACGGTTACTGCACTCTCTGCTCACTTAATTACGTGTACCTTCGATTTGCCGTCTTGATTCGTCTCTTCCATTACTATCGAGTTTGGAATGTTCCAATTAACCACCGTTCTTCTTTCTCTTGACTCATTGGAGTATTCCAATTTATTTCTCTGTCTTTATTTCTTTTTTTTCTTCTTTTACTGCGATTTTTTTTCTTATGGTGCGATGTTTAGTCAAGTGTGATCTTGGTTATTTTTTCTCTCATTTTCTTGATATTTGAGTGCTTTTGATGAATGTTTCTGGGTCTACTGCACAGGTTACACGTACATCAGCAGCTGTGCAATGTAGTCATCCAATACATTTGCAACAGCGCCTTCATTTTTCTGTTATATTTACGCCGCATGCATGTTCATTAGCAGCCGCCCACCGATTAGTGCAATATTCTTTCGGGGGCAGCAATATTTTACTCCATTTTATGTTGAAAAAAAAGGCTGTATGATCGTTTTAGTAAGGGTTTAGACTACAAAACGGATGTTCGATGCTACCAGGTTTGATAAATTAAAATAAAGTTCACTCTATATATCTGAAGGTAGACCGGCGCCATACCCTTTTTATTTGCCGCAGGATTTTTTTTCGAGGGGAAATTTGCCGCAGGCTTAATTTCGTTACTGTCGCTCTGTCGTTCATCTTTGTGTTCGTTTTCAAAATAAACTCAAGTTTACCATGAATAAAATACTTATTTGAAACCCCAAGTTCCTTTTCGGATCAAAATAAATTACCTACCTATGCAAAGTGAAATATGATCGATAAATCTTTTGTTTGTGATGGGTTACTTTTGCAACAAAATCACAATATCGTAAGCAAATTACTTCAGCAAAAAATATGCAAATACTATTTTTGTGTGTCCGGTCTACAAACACACATGAAGATATATTGATATATAATCAAAGTTTGTATATAAGTATAGGTGACTTTGTGTACCCTAAGAATTTCACTCATTGACCAATATTGAGAGTATAGTCTCCTAGCTAATCTGATTCTGCAATCTGCTGATTTCACCAACTATATCCAAACTTTTGTCTTCGGTTTGTTTTTGTTTATATACGTGATATCTTATGGGTTGCTTTCAAACCGGGTGGCTTGGAATAATTGGATGGAAAACTACGGGCTGCACAGTTACGGTGGTTTTCTGGTGGGGGCAATGAGAAATGGGTGGGTCCTTAGGATTGTATAACCACATATGTACACATATGTACGCCCACATGCTTCTTGCACATATTTATTTATTCCGAAATATTTACTAAACTATCTATTTTAACATGCTATTAATATTTATTTGTTTTGCTGACAGCCTAACATCACTACCATGGACCTAGCTACTTTCCTCCTCTTTGGTTTTCAAGCCGTTATACATTGCCTTTACGCGTGTCCTATCAGCCATCCACTAGTTTCAGAACTAACAGGATAAGTTGTCCTTATCTTATTAGACTCTATTTGGTGTACGTGTAGCATCTACCCTTCACTAGATATAAAACTAATAAATTATACGTACAACTTGTTTATAATGTCCATTATGCACCCTTCATATATAAAACTAGTAAAACTATGCGTACACCTTGTTTGAATTGTGTACATCTATCCTATGGGGAAAAGTGCGAAGACCTTTTCTAAATATTATTTTTTATTATTGTCCTATTGAACTTCTTGTCCACTTGTAACACATTTGGTCTACATTTTAAGAGACTATTTCTTCTACTCACCTATCATTTTTATAGCTTCTTTCGTAATAAACAGCGGCACTTGAACTAATAGGATAACAACGTACAGCCTCATGTGTGAACATATACAACAGTGTGTTGAATTATATGCAATTCAAGTTACCTTAATTTCCTTATCCTTGAAAAAGAACAAAGTCGCTTTTTCTTAGATTTTCCCATGTCTCAAGTTATGTCTGGCCAAGACGACGGTAAGCTATAACCCGAAGAAGGTTAATCGAATTGGTGCCCCACACGCTGCTATACGGCTGCCGTGTGATGTATAGACTGATTAACCAAGGGGCTGGACGACGGTTCTTCGCTTGATGGTGTATTATCGAACGCGCGTAATTAAGCTAGCTTAGCTAGGTTAGGCCCGCTAACCTTACACATGAAATTAAGTTCTGTCATATCCCGTCTAGGTTCAGTTGATCGATCTCTCTCGCGTGCAGACATCAGCGAACCAAAGTAGAGGTGATGTCACCTCCTATATATACATGCGAGCACCAGACGACGACGATCGAGGAATAATTCATTCTGGGTTCATTCTCACTCGCTGGTTGCCTGGCTGGGGTGAGTGGAAGAGTGTTGCACGCGGCGCCAAAGCCATCAACAGTTTGACATATCTGTCCATCGCCGTGAGATCGATCGTAAACGGTAAACCTGGTCTACTACTATACTATACGATGGGATCCGGTGGCAACTTGGTAGGGATGGAGGTAGAACAAAATAGAGAAGGGTATCACTCGCTTGGTTTACTCTACTTTATATCAAGTTTAGACTGATATGTATGCTTGAGTTTAAATTGAGGGGGTGCACATACGGTGAAAATTGATAAATTATAGATATTTTTTTTTAACCGGGTTCCTAGCTAGGCATCCCTCTCCTAGTTACCTAGCTCCACCCCTGCAACTTGGCATGTTCTATTTAAGAAACTGCATTTTGATAAAAAAAAATGTTTCTTGCACACTTGCGAATTGGGAGTACTTTGTGTGACAATGGGGGGATATATATATATCGATCGTAGATTAAACTACTTGTGTGTGATCACCCTCCACCGTGCATGCGATGTTCGACGGCAGTACGATTTAGCTAGAATGTCTAGCATGACACATTAGAATGTCTTTGATGAACATCACGCATGTGCAAGTTGATTAATTGCATACACTATAATATTATATTAATATGGCACAATACATATTACACTTAGAAAGAACTTTCAATTTTCGTCCTAATTTTTGCCACACATAACTGAAAACAACAATTTGCAGTGGAAAACGCAATGTTTTAACAAAGACCCAATCATATTTCTAATACTATTAACATCAAATTGTGATTATATATATATGATTCCGTGGAAAGAAAAATCCATAAAAAAATAAAAGAACTGAACACAAGCCCAGCTAGCACCTTGAATTTCAAAACTAGGCATGTAGCCTCTTTTACTTTGCAATACTCCATTTGCATAATCTTTGGAGTGATTTGCCAATCTTCGATCGTTGAATCGACTATACATGACACACATGTAGGCATTGTGTTGGTTCTTAGTTGTCTCAGGAGAAAAAGGGTACAATGGAGAGAGATAATGGAAAATATCTTGTACTATGTCACTCAGAGCAAGTATAATAGTGAGCTATAAGCTTACTATATACTTAGGTGGAGGAAAGAGGAAGTAAAAAATCAAGGGTGTTGGCTCTCATGCAAGAGCTAACTTATCACAAGCTCCAAGATAAATACATTAAATATATAAGTGAGAGATAGAGAGAAGAAGAAAATTATAGCCAAACTTATAGTTAATCTACTATATATATTAGTTTTAAGATAAGCTAATAGTAGAAAGTGGGCTCTACTATTATTCTTGCTCTCGGGCATAGCCATCTTAAAGGGTTATGTAGATAATATTGCAAAGCTCAGAGGGCCAGGCGACAACTGGTTTAAATGATCACACAATGCTTACTTCCTAGGAACTATCAAGTTGGGCTCCTTTACGATGCAAGTTCTTCATTTGATTGGTAATTAATAACAGATGGTTGGCTTCGGATCGGCTAGTCTCTTCCACAGCCGAGTGCATGCCATCTTTGAGATCAAAGTGATGAAACTATACAACACATACAATTGTCTCTCGTGTCTTTTGCAAGCTGTGTGTACTTCCCTTCTCTTGGAGATGGGGTTGCGCTGGGGTTGCATCTCAGCCAACGACAGTTCATTTTTCAGGTTGGTGGTGTGTAAAGCCATCAATGAAGTTTCAAAAGAGATGCGCAAAGGACTAAACTCATTGATTATTCTAGTAGCATAGGAGATTTGGAAGAACCGTAACAATTGTATTTTCAAAGCTTCTCTAAATGTTTTGGTGGTAGCACGTGCAGTGGCAAATGACAGTATTTGTGGTGTTTAGCCGGAAACTCGAGCGCTCTGTAAGCTTTCTTTGTATGTAGGTCAATTAATTTGGACGACTAATGATGGCTTTCTGGGTAACGAGTTTATGTGAGTGTGGCCATTTTAATTTGTTCCTTATGTTTGTAATTATTTTTCCCTTTTTTTTATTTTTCTCAATGAAACGAAGCACAAACCTCCTTTACTTTTGAGAAAGAAAAGCTTGAAGTGTTAAACATACTTTTTTTTTTGCGGGAGTAGTATATAGAGGGTTTTTTTTTCCATTGTGGAATAAGTTGCTGTTGTGTTTTTCTTACAACAGTATCATCGTCTACTTCGAACCGTAAGTGCTACTCTCTGATGAACCTTGTGAAACGGATTTAAAACACATGCATGCATGGAACAAGTTCATTTCCCAGATGTGCGGACCACTGCTGCATGTTTAGCATTTCCAAAAAAAAAAAAAAATCTGCTTAGTCACCAACTCACGATTTATACATCTTCTTATAACAATATTTGTGGATATAGAGATCGGATTAATGAAACATCCATTATCTAAAAAACATCTTCTTATGGCAATAGGTTTCTCATCGAGTGCTAGACCAGCAGGATCATCACTCGGTGAGGTTCGCCATGGCGCCATGAGCAGCAGCAGCAACAACAACAAGAAGATGAAGGCCCCACTGAGCTTCGCTAGCAGCAGGCAGGGCTCCGGCGGCCTCTCCCAGATATCCGAGGACGGCATCCCGGACCTCACTGACAGCATCCATGGCGCCGCTCATCATCATGGGCGCTCCGAGGAGAACGTCTCCACCCACGACCACGTCGTCCGCTCCTTCTCCTCCGGTGGGTTCTCGATCGGGTCATGGGAGGACTCCAACTCCATCGTGTTCTCCACGTCGACGGGCAAATCAGGAGCGCACGGCAACGACGACATCATCGCCACCCTTAGCAACTACGAATCTCAGGTGTATATATATATGCGTTTTATCTTTATTTTTCATTTTTCGTATTTATAGTTTGATTTATTAGTGTGTGTGTGTACAATGTGAGGGATGATTTCATGTCTAATTTGTATATACATGCATCTGCGATGCAGCTTGTTGCGCCCAGGGAGATGGCTGGCGTAGAGAAATACCTGCAGATGCAGCACGACCAGGTGCCATTCAGAGTACGGGCCAAGCGTGGATGCGCGACGCACCCACGGAGCATCGCAGAGAGGGTATGTATAGACGACATTTTCCCTTGCTAATTCTACGCCCCATCATAGTACCAACTTTTTATGTACGTACGTAGCGGGTCGAACTATATACTGTAATGTCAACTAGCATGGAAGCGTATCCTAGATACATAGACCTTTAACGTGTATAGTATGCACCGTACATCAAATTAACAAATATCATAAAAAAATTAGAAAAAAAATCAATATACATGTATTTTTAGTATTATATTTACACATAAAGTCATGTCTTCAAATTCATTACATAGATAGAGCAACAAAAATGATAAAATTCTGATATACTTATTGTCTTAAAACTATAAAAAAATTGTTACACCTATGATATAACAAATTTGAGGTTAAGATTTTACACAAAGGTGTAGCATTTTTGAAATTATAATATGTATTTTTTAAAGAATTTTTTGTGATATTTGTTTGTTGGTGTGTATAGAATTTGCATGCGAAACTTGTGTGCACATGATATGTTACCAAATAAGAATATTGATAACCTTTCAAGATGTTCTTCATATGCATGCATCTAGCCAGTAGCATTCTTGTTGTTCCTCCTTGGATCGTGCATGCCAGATTAATCTTCAGGCATATGATCGATCGATGATGACAGGAGAGAAGAACGAGGATCAGCGAGAAGCTCAGGAAGTTGCAGGCCCTGGTGCCCAACATGGACAAGGTGTGTGCCATACGTGTGTTCTTTTCATGTATATACCAGTCCTTGTCTGAACTTTTTCGTCAGACAACAATCTTCAGGTTATTGAGTTGGAGTTCAATTGATGATCTTTCTAATTTGTTCTTCTTACAAATTAATGTGGCAGCAAACGAGTACTTCAGACATGCTGGACTTAGCAGTTGATCACATCAAGGGACTGCAGAGCCAGCTGCAGGTATAATGACGTATGCGTGTTACTAATTTGCATGTTCAGAATGGCAAAACTGAATTGAAGCCACTGCTGCCTAAAGAAGCCTGATAGGTCGATGTACCAGTCCAGTTACAAAGACCCCCGTTAGCATCAGAATATATATAGCTAGATGGAATACCAATATATTGCACTGTAAAACAGCAGCTCAGTATGAGTAATCAAGTATCCCTCCATTTCAAAATAAATCAACTTCTATTACAAACATAGACATAGCTAAAAGTTGATTTATTTTGGGACGGATATGAGGGAGTAACATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAAAAGCACAACGCAACCCGGAAACAACACTGAGTTTTTCCCTGTGTGCAGACTCTGAAGGAAGACAAGGAGAAATGCACCTGCAGCTGCAAGCAAGCATCAAGGAACAGACCAGCCGACTAAAATGGGATGTGAAGCAAATTGCAGTGCTGGCTAGTTTGATGACATTTCTCCTTGGTCCTCAAAACATGTTTGCCTGGCGACAGGAAATTAAAGGTATAGCAGGCAGCATATAGCGTGACAAGAGCAAAGTAATGGAGGTCATCAGTCTCTTCCAAACGAAAGGTCGAAGTCGTCTGATCAAACCTTTACCAGTGAATCGATCAGTCCAGTCTTTTTTCTTTTGTCAGTGTGACCAACCCCTTTTGTTGAGCTGTAAAATTAATTGAAACTAGACTAGAATTGTTCCTTCCTTTAACAAGGAGCTCTGCTGCTCTGGATGTTAGGCTTCTAGCTGTCCTGTTGCTGTGGTAAATAGTGATTGGTTCACCCAGCGGTTAGCAAATAATCTGGTTGCTGGTTTCAGGGTATTCTCCGGCCAACATTAGACAAGATTCAGTGATGTGTTATGATTCATACAGATCATTAGACATTATCCAGAAAA
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| CDS seq | ATGAACCCGGCGCCGTCGAGGGCGCCGCAGCGGCAGCAGCGCGGAGGGGAGATGTCGGCGCGCTACGGCGGCGGGCTGCAGTTCTTCGCTGACGCCCCGCCGGCGGGGGTGGAGGGGGGCGCCGCGACCGCGCGGACGTTCTTCCCGGTGCCGGGCGGGGGAGGGGAGCAGCAGCCGCCGGAGCGCGCGATGAGGCAGCAGCACTACGGCGGCGGCGGGAGTGGTGCGGCCGAGATCTCGCTGGGGCACGGCCACGGCCACGGCGGCAAGCACCATTTCCATCAGTTCGGCGTCGAGGCGAAGGACGGTGGCGGCGGCGGCGACCAGTCGGGGTTTCTGACGCGGCACAACAGCTCGCCTCCCGGGTTCTTCTCGAGCCCCGTCATGGACAACGGTTTCTCATCGAGTGCTAGACCAGCAGGATCATCACTCGGTGAGGTTCGCCATGGCGCCATGAGCAGCAGCAGCAACAACAACAAGAAGATGAAGGCCCCACTGAGCTTCGCTAGCAGCAGGCAGGGCTCCGGCGGCCTCTCCCAGATATCCGAGGACGGCATCCCGGACCTCACTGACAGCATCCATGGCGCCGCTCATCATCATGGGCGCTCCGAGGAGAACGTCTCCACCCACGACCACGTCGTCCGCTCCTTCTCCTCCGGTGGGTTCTCGATCGGGTCATGGGAGGACTCCAACTCCATCGTGTTCTCCACGTCGACGGGCAAATCAGGAGCGCACGGCAACGACGACATCATCGCCACCCTTAGCAACTACGAATCTCAGCTTGTTGCGCCCAGGGAGATGGCTGGCGTAGAGAAATACCTGCAGATGCAGCACGACCAGGTGCCATTCAGAGTACGGGCCAAGCGTGGATGCGCGACGCACCCACGGAGCATCGCAGAGAGGGAGAGAAGAACGAGGATCAGCGAGAAGCTCAGGAAGTTGCAGGCCCTGGTGCCCAACATGGACAAGCAAACGAGTACTTCAGACATGCTGGACTTAGCAGTTGATCACATCAAGGGACTGCAGAGCCAGCTGCAGACTCTGAAGGAAGACAAGGAGAAATGCACCTGCAGCTGCAAGCAAGCATCAAGGAACAGACCAGCCGACTAA
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| Protein seq | MNPAPSRAPQRQQRGGEMSARYGGGLQFFADAPPAGVEGGAATARTFFPVPGGGGEQQPPERAMRQQHYGGGGSGAAEISLGHGHGHGGKHHFHQFGVEAKDGGGGGDQSGFLTRHNSSPPGFFSSPVMDNGFSSSARPAGSSLGEVRHGAMSSSSNNNKKMKAPLSFASSRQGSGGLSQISEDGIPDLTDSIHGAAHHHGRSEENVSTHDHVVRSFSSGGFSIGSWEDSNSIVFSTSTGKSGAHGNDDIIATLSNYESQLVAPREMAGVEKYLQMQHDQVPFRVRAKRGCATHPRSIAERERRTRISEKLRKLQALVPNMDKQTSTSDMLDLAVDHIKGLQSQLQTLKEDKEKCTCSCKQASRNRPAD |
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| Function | Transcription factor bHLH128 [UniProtKB/Swiss-Prot:Q8H102] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os04g41229 | LOC_Os04g41229.1 | Chr04 | 24461146 | 24468949 | + | MSU_osa1r7 | ||
| CDS seq | ATGAACCCGGCGCCGTCGAGGGCGCCGCAGCGGCAGCAGCGCGGAGGGGAGATGTCGGCGCGCTACGGCGGCGGGCTGCAGTTCTTCGCTGACGCCCCGCCGGCGGGGGTGGAGGGGGGCGCCGCGACCGCGCGGACGTTCTTCCCGGTGCCGGGCGGGGGAGGGGAGCAGCAGCCGCCGGAGCGCGCGATGAGGCAGCAGCACTACGGCGGCGGCGGGAGTGGTGCGGCCGAGATCTCGCTGGGGCACGGCCACGGCCACGGCGGCAAGCACCATTTCCATCAGTTCGGCGTCGAGGCGAAGGACGGTGGCGGCGGCGGCGACCAGTCGGGGTTTCTGACGCGGCACAACAGCTCGCCTCCCGGGTTCTTCTCGAGCCCCGTCATGGACAACGGTTTCTCATCGAGTGCTAGACCAGCAGGATCATCACTCGGTGAGGTTCGCCATGGCGCCATGAGCAGCAGCAGCAACAACAACAAGAAGATGAAGGCCCCACTGAGCTTCGCTAGCAGCAGGCAGGGCTCCGGCGGCCTCTCCCAGATATCCGAGGACGGCATCCCGGACCTCACTGACAGCATCCATGGCGCCGCTCATCATCATGGGCGCTCCGAGGAGAACGTCTCCACCCACGACCACGTCGTCCGCTCCTTCTCCTCCGGTGGGTTCTCGATCGGGTCATGGGAGGACTCCAACTCCATCGTGTTCTCCACGTCGACGGGCAAATCAGGAGCGCACGGCAACGACGACATCATCGCCACCCTTAGCAACTACGAATCTCAGCTTGTTGCGCCCAGGGAGATGGCTGGCGTAGAGAAATACCTGCAGATGCAGCACGACCAGGTGCCATTCAGAGTACGGGCCAAGCGTGGATGCGCGACGCACCCACGGAGCATCGCAGAGAGGGAGAGAAGAACGAGGATCAGCGAGAAGCTCAGGAAGTTGCAGGCCCTGGTGCCCAACATGGACAAGCAAACGAGTACTTCAGACATGCTGGACTTAGCAGTTGATCACATCAAGGGACTGCAGAGCCAGCTGCAGACTCTGAAGGAAGACAAGGAGAAATGCACCTGCAGCTGCAAGCAAGCATCAAGGAACAGACCAGCCGACTAA
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| Protein seq | MNPAPSRAPQRQQRGGEMSARYGGGLQFFADAPPAGVEGGAATARTFFPVPGGGGEQQPPERAMRQQHYGGGGSGAAEISLGHGHGHGGKHHFHQFGVEAKDGGGGGDQSGFLTRHNSSPPGFFSSPVMDNGFSSSARPAGSSLGEVRHGAMSSSSNNNKKMKAPLSFASSRQGSGGLSQISEDGIPDLTDSIHGAAHHHGRSEENVSTHDHVVRSFSSGGFSIGSWEDSNSIVFSTSTGKSGAHGNDDIIATLSNYESQLVAPREMAGVEKYLQMQHDQVPFRVRAKRGCATHPRSIAERERRTRISEKLRKLQALVPNMDKQTSTSDMLDLAVDHIKGLQSQLQTLKEDKEKCTCSCKQASRNRPAD
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os04g41229 | LOC_Os04g41229.2 | Chr04 | 24461146 | 24468319 | + | MSU_osa1r7 | ||
| CDS seq | ATGAACCCGGCGCCGTCGAGGGCGCCGCAGCGGCAGCAGCGCGGAGGGGAGATGTCGGCGCGCTACGGCGGCGGGCTGCAGTTCTTCGCTGACGCCCCGCCGGCGGGGGTGGAGGGGGGCGCCGCGACCGCGCGGACGTTCTTCCCGGTGCCGGGCGGGGGAGGGGAGCAGCAGCCGCCGGAGCGCGCGATGAGGCAGCAGCACTACGGCGGCGGCGGGAGTGGTGCGGCCGAGATCTCGCTGGGGCACGGCCACGGCCACGGCGGCAAGCACCATTTCCATCAGTTCGGCGTCGAGGCGAAGGACGGTGGCGGCGGCGGCGACCAGTCGGGGTTTCTGACGCGGCACAACAGCTCGCCTCCCGGGTTCTTCTCGAGCCCCGTCATGGACAACGGTTTCTCATCGAGTGCTAGACCAGCAGGATCATCACTCGGTGAGGTTCGCCATGGCGCCATGAGCAGCAGCAGCAACAACAACAAGAAGATGAAGGCCCCACTGAGCTTCGCTAGCAGCAGGCAGGGCTCCGGCGGCCTCTCCCAGATATCCGAGGACGGCATCCCGGACCTCACTGACAGCATCCATGGCGCCGCTCATCATCATGGGCGCTCCGAGGAGAACGTCTCCACCCACGACCACGTCGTCCGCTCCTTCTCCTCCGGTGGGTTCTCGATCGGGTCATGGGAGGACTCCAACTCCATCGTGTTCTCCACGTCGACGGGCAAATCAGGAGCGCACGGCAACGACGACATCATCGCCACCCTTAGCAACTACGAATCTCAGCTTGTTGCGCCCAGGGAGATGGCTGGCGTAGAGAAATACCTGCAGATGCAGCACGACCAGGTGCCATTCAGAGTACGGGCCAAGCGTGGATGCGCGACGCACCCACGGAGCATCGCAGAGAGGGAGAGAAGAACGAGGATCAGCGAGAAGCTCAGGAAGTTGCAGGCCCTGGTGCCCAACATGGACAAGCAAACGAGTACTTCAGACATGCTGGACTTAGCAGTTGATCACATCAAGGGACTGCAGAGCCAGCTGCAGGTATAA
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| Protein seq | MNPAPSRAPQRQQRGGEMSARYGGGLQFFADAPPAGVEGGAATARTFFPVPGGGGEQQPPERAMRQQHYGGGGSGAAEISLGHGHGHGGKHHFHQFGVEAKDGGGGGDQSGFLTRHNSSPPGFFSSPVMDNGFSSSARPAGSSLGEVRHGAMSSSSNNNKKMKAPLSFASSRQGSGGLSQISEDGIPDLTDSIHGAAHHHGRSEENVSTHDHVVRSFSSGGFSIGSWEDSNSIVFSTSTGKSGAHGNDDIIATLSNYESQLVAPREMAGVEKYLQMQHDQVPFRVRAKRGCATHPRSIAERERRTRISEKLRKLQALVPNMDKQTSTSDMLDLAVDHIKGLQSQLQV
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0489600 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g39140 | RBH | 0.000000 | 0.0 | 0.000000 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0489600 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0018020 | RBH | 0.0 | 20.555578 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0018810 | RBH | 0.0 | 4.798455 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0018510 | RBH | 0.0 | 16.463947 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0018230 | RBH | 0.0 | 0.472975 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0018430 | RBH | 0.0 | 8.866877 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0382800 | RBH | 0.65488 | 59.3211845 | 0.5772075 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0017220 | RBH | 0.0 | 0.700129 | 0.000000 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0382000 | RBH | 1.337112 | 63.6149195 | 0.013255 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0017720 | RBH | 0.0 | 0.760063 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0017560 | RBH | 0.0 | 31.590958 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0017630 | RBH | 0.0 | 31.129406 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0018070 | RBH | 0.0 | 0.974603 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0018220 | RBH | 0.0 | 3.474467 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G017520 | RBH | 0.0 | 0.492758 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0017450 | RBH | 0.0 | 29.121630 | 0.0 |
