Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os04g25100 | OGI:01011440 | 16/16 | Nipponbare | IRGSP 1.0 | MSU | Chr04:14492819-14500640 | ||||||||
| Gene Symbol | OsSTA119, - | ||||||||||
| DNA seq | ATGCCCAAGAAGATGTCAAGGTTGGAGTTGGACGCGGGGGTGTCGCTGTGGGCAGGCCTTCAACCGGACATACTGGGAATCGTGCTCCACTTCCTTCCATGCCTTGCCGACCGTGCGAGGGTGCGGTCAGTATGCCGTCACTGACGAGCCAGCGCGAACGGCCACGTCCTGCCACCGCCGCTGCCCCTGCTGGTGCTTCCTGGTTTCAAGTTCTCGAGCCTATCAGACAAGGGGGATTTCATGCCTGTGCGGTGCGTGCCGGTGCCTAAGGAGGTTGCAGCTGATGATCTCCGATGTGTGGGTTCTTTTCATGGATGGCTTGTAGGTGTGACTCCTAACAAGGATCGCAGCGACGAGTACAACAGAGATGCCGATGGTGACTGCTTCCTGGTGAATGTTTTCTCTCGCAAGGTCATTCGCCTACCGCAGCTGTGCCATATGCGTTACAATTTTCCTGCTTACTCCAGTAAGACCCTCCGCATCGTCAATGGTTCTGGTGAGGTCCATTTTGGTGTCAATGATATATACACAATGTCACTATGTAATGTGGCACTATCTGCTTCACCTGAGTCATCCAAGTACATTGTGGCTGCTTCCTCAGACCACAAGGGTGCACCAGTACCAGCTCTCTGGCAGCCTGGGATGATTTCATGGCAGGTTTGCTCTGGAGTTGAGATTGATGGCCCAAGAGATCTCTCCTTCTACCAGGGGAAGCTTTATATGCTCATGAGGCACAGGACACGCCTATTCACTTGTGAACTTGAGGAGGATGATCGTGGGTTCATGGTCTCTCGTATTGAGCTCTCTCTCACTGAGCTGCCTCGCAATCATCCCTACCAGGAAGGTGGTGCAATAAGTTGCAATATGGTTGTGTGGCGTGGAGAGCTATTATTAATCATCAGACACTACAATGGCGATTACCGTAAGAGACAACTTCATAAAGTTGAAGTGTTTGCACTGGATGTTGACACAAACCCTTATGGACTAACTGAGATTCACAGCTTGAATGGTGACTGTATCTTTGTTGGCTTAGGTGGCTGCAAGTCCTTTCCTGCTGGTCTACATCATGGAGTTGAAGGTGACCATATCTACTTTGTCCCTGATGATTGGAGGCCTTATGATACATTTGTGTATAGCATGAGAGATGGTAAGATGAGGTCCTTTGCCGTCAAACTATTAGCTTCCGAATTTGATGTGGACCAGTTGAGTCGTGATTTCCCGGTGTGGTTACTTCCTACCGAATGATGCTGCGCAGCAAAGCTGATCTAGCTGGGAGGGTGGTCAAGAGCTTACCTTTCATTAGACTCCTTGGTCGAGACTATAATGTGTATTATCTGCTATGTTCATGTTGCAACTCTCAGATTATCTTTTGTATTTCCTGTTGAACTGGCAACCATGATTTGGTGCTCTCTTTCGGAGTCTTTCTTGTTTCTGTTTTTCTGGGACAGTGGTACTGTTGTTGTCTGACTGAGGACATATAAAGTATGGCTGCATTATTCTGCTGTTGTTTGTGGCATGTCGTTTCTTCAAGTCCGATCTTTGATGGTGTTTTGAGAAAAATATGTCATGGTTTTGCGATATGGATCAGAAGTTAGTATATTATTGCTACTATGTATCTGAAGGCTTTGATGTTGCAGTTGTTGCTGGATCATCTGTAGAGATTTTATTTCTTAAGGCGAAAAGTTTGATTCATATACTCACCAGATATTCCATCTTGTTCTTTCTACTCAAGGTCCATGAAGTTTGTCATGGGGTTGCTGGAACGCACAAACGGGCTCCCTGTCTCTTTTATTCCATTTTCTGGTTATTTTTCCTATCTATTTTGACTATGAAACTCGAGACAAAATTTAGCTGTGAAAATTTATATTTTCTCATAAGGCATTAGAATTTGGACAATAATTTGTTCATGTTCTCATATAAAACTTTTCACCCAACTTTCAAAACCAGATAAATAACTCAGCATTTGCATTATATTGACCTGCATGCTGTCACTAAATCCTTAACATGAACACCCTTGGGTTGGGGCAGATGGAGAATCTCGCATGAATGGAAATGACAACACTAGTTCTTACGTGCTGCATGCCCACTCTGTTCATATATTGGTGCTCCACATATGTGCTAGAATGTTCACAACACTTTTTTCTCTCTCTCATATCTCACCAAGAACTTTGATATATCAAAAGGTCTATCAATTAATCATGTGAAATAGTTTCGGACTAGTGAACATAGTTAAGCGGCCGGATGGTGCGAATTAAGTCATGCCTCTTTCTACTTTTTCAAAATTACCTACTATCCAGGATGAGTCCCATGATTTTGTTACTACGAATGCGTCTAGAGAGCATATAATTTCAGGTGTTGATGGAGGAGTTTGTTTCTTCAGATAAAATTACAAGCTTTCAGAATCAAAGGTTCAACTGATCAATTACTCAATTCCTCAAAGCAAAGACTCCCAGTCCCTCAATGCACTACAAGACCTTATATATATGGATGGAATCATCAATAAATAACAACCCTACTGCTACCGTTTTCCTCGGTCTTTTGAATTTCTTTTGGCTCATCGGAATTTTTTTAGTACAGAAGCTCCTCGATGGGGCAGCTTAACCGTTCAAGCATATCATATATAAAATCCATGTATAGTACATCCATAAAAAAATATTAGTGCTTACACATTGCACAGCCAGCTCGATGCTGAAAAGATATAACCATTTAAAATAACTAGGTGAAACCTCGTGCCTTGCAGCGGGTGTTTGGTATGATAATAAAAATTAGAAATAATGTGTAAGATAACTAGACAATAGAAACTTGCATAAGCTGATTTTTTTTTTTAGGAAACCGACGGCAGGAGCTCTGCCGGAATTTGATTTGAGAAAAGAAAATCCGTGCAATACAGACCAGAGCGAGCAAAATAAAAATACAGATCAAGGTGGCTTAAAAGCCGAGCTACGAAGGTCTATTTCCTGCTTGACAAAGTAAGCTACGTCCCTCTCTGATCTAACAGAACTATTGAAAATTCTATTATTCCTTTCCAACCAAATATTCCACCATGTTGTGAGGAGATCTCCTCTTGTTTTCAGCTTTTGCTCATTTGAACCTTGACGATCGATTTCAGTCCACCAGTTGGATGTTCCACCTGTGGATTGAGCATTTCCTCCTGCCAAGTTTAGCCATGAGCAAACAAGGTTCCATACTTGCCTGACGAATGGACATTCACTGAACAAGTGATTTGTGTCCTCAAAAGCACATGTGCAGAGGCAACATATCCAATTGCATGGCCAATGTCTCATGAGAAGGTTTTGCGCAGTGAGAGTTTTCTGATGAAGAACAAGCCATCCAAAAAAGAGTGATGCTCCGGTGCAATATACTTGAAGTATTATACTCCGAGTAGAATTAATCTGGACCGTTTATTTTAAAGGGTAGGTAAGTAATCTTCTAATATCCTTTAGGGGTAATTTTGGTAGGGGGTGTTTTGTTCGGTGCGCATCTTCGGTTCGCATCGGTTCACATCGTAGGTGTGGACTCCGTCGCGCTATTCCTTCCCCGGCGTCACCGCCTTGCCCGCATCCGTCCGTATCGCTCGCCGTCGCCGCCTTGTCCGCCTCCTCAGTCGCCGTCCCTCTCCTCCGCCCGCGTCGCCTTATCCGCCCCCTCCGTCGCAGTCCGCCTCCCCCGCCCTTCCCGCCCTCACCGCTGTCTCCAGTCCCTCCGGCGCCGTCCGTCGGCCCGGCCATCTCCCCCTCCCCCTTCGGTTCGCATCTGGTCGGAGGCAGGCACCGGCAGGCGGCAGCGCGCCCGGCGGCTATTCCTCCTGGCAGGCGGCGTCGCGGCTGGTGGCGCGGTGCGTCGCGTCTGTTCGACGCAGGCGGCGGCGTGGCCTGCGGCGCTGGTAGTGGCTGGGTGCGGCGAAATCATCAGGTAGGTAGTGGCAATCTTGTTTTTCAGTTCAATAGCAGTTGAACTTGCCGAAATGGGACTAATGTGTTACCTGAATTGCTGAATCTAAATCTGAAAATTTTCTTCTGGATTTTAAAAGCTATTGTTTTTGTAAATACCAGTCCATAAAATTAGTTGTTTCCCATCGATGTTTTCATATCACATCACTGGTCAGAAGTAGAAAACAGCACATTCCCTTCGGTATATTTGGTTATACACATTGATATTTGATTCGTTTCTGTCAGTTTGATGCTTCAGTGGTGATGTTAACATGTCCTACAGAGTAGCAAGTGCAAAATGCATCTTTGAGTGAAAAACATATCTGCCAATGTTGAATCATTAGGATTCAATAAAGATGACCTGATTCTTGTGAACGATGTGGCTTGTGCAAAATTATTTATCTGATAAACGAACTATAGAATACGGTGGAGATTTACTCAGTTTGTCAACGACTGTTATGTGTGTTAGTTCTTAACTGTACCGCATTGGCTCGCCCTCTGTGTGTGTGTGTGTGTTTTACAAGTTATTACTGTTGTGCATGACTAGGAAATTTAGCTGTTAAAAGAACCACACTTTAGTTTTTTTCTTGGTCATCATTAGCTTTTCCTGTCTCAGGTTGAGAAGTGGAATGAACAGAGGGAGAGTGGGACATTTGCAGGACCACTCTAAATCTCCTGTTTGAGAGTCTTCTCAGATCAGTCCGCTGCCCTCGTCGGTGTCACTGCTATCATCTGGTTGGAGTGGGACTCATTCGGGCGACGCTCCGGTGCAATATACTTGAAGTATTCTACTTCGAGTAGAATTAATCTGAACCCTTTATTTTAAAGGGCAGGTAAGTAATCTTCTAATATCCTTTAGGGGTAATTTTGGTATGGGATGTTTTATTCTGTTCGCATTGGTTCGCATCTTCGGTTCGCATCGCAGGTGTGGATACCGTCCCCCAATTCCTCCCCCAACCTCGCCGCCTTGCCCGCCTCCGTCGCCGTCCGTATCGCATTGGTTCGCATCTTCGGTTCGCATCGCAGGTGTGGATACCGTCCCCCAAGTATGAACGATGAAACTGAAGAACAATAGTTTTTTGAAAGAAATATGAACAATATTAAATTGATTTTGCTGTGCATGTATGGCTTGCTGCCCTAGCGAACTGACCATTGATATTTAGATATGATTTAGCATGACATCTTCTGGTAGGATAAGACAAATGCGATATATTTTGACAAAAATAGACAGGGGCTGCATTAACATTGGACTTGGCTTATTTTGCTAGTTTGTCAGCTAACTTGATTATGTCCATAGGAATCCACATGACCTGCAAAAGAGATTCAGGAATTGTGGCAACGATCTGACTACAAATAGGTCTTAATAAGCTGCAATGACCTGGCTCCGTTTCGGATCTTCCTTTTTTAAGGGTTTCGACAATGGTAGAATTATCAGAGAGGAGCATGTAACCGAAGTCATTGTGAAATACACAAATGCATATATTCTCCAGTGGTGCTGAAAAAAGAAACAGAGTTCTGAAACTACTGGATGATGTGCAACACAAAATTTGACTGTACAGCTGAAATGAAAAAAGAAAAATTATCTCTGAACAACCATTTTCAGAAAATGTATTTTAGTATAACAATTTATCGTACATACAAAATTTGCAGCCATTGTGGGGGAACTGTAGTAATTGCTCAATAGTTTAGAGTGGCAATGTATTTATGCAGTTGATGGTTGTTCTTTTTTTATATATACTTATGAGGTATAAAGGACGTAAGCTTATATTTGGGTGCTTGATCTGTTTGTTTTTTTTTGTACTTTTCCGTAGGTGAGGTCTGACATAATGACTTCGAGCTATGTGAGCCTAGAGGATCAGGAAGAGTATAAAATGATGGGTACTGTGGTTTTTTCAAGCGAGGAGGAAGGTTACAAATTCTATTTAGACTATGCAAAGGGGAAGGGTTTCAGTGTGAGGAAAAACAACCTTAAACGGAAGGACGGTGAAATTATATGGAGGCAATTCGTATGCTCATGTGAAGGGTACAGGGAGTTGAAGCACTTTGAGAGGACAGAGCGGATAAGGGAGCCACGGGCACTGACCCGCTGCGGTTGCTTAGCTAAGCTTGAGATTGAGCGGAACGAGGAGAAGGGGGTGTGGTTTGTTAAGGAGTTTGATAACCAACATACGCACGAACTTGCAAATCCAGACCATGTTGCTTTTTTAGGAGTTCATCGTGTGATGAGTGATTCTAAGAAAGCCCAAGCGGTCGAGCTTCGCATGAGTGGCCTTAGGCCCTTTCAAGTCATGGAGGTTATGGAGAATAACCACGATGAGTTAGACGAGGTTGGTTTTGTGATGAAGGACCTTTATAATTTCTTTACGCGGTACGACATGAAGAATATCAAGGGTCATGATGCTGAAGATGTGTTGAAATATCTAACAAGGAAGCAAGAAGAAGATGCAGAATTTTTCTTCAAATACACCACGGATGAGGAAGGGCGTCTTAGGAATGTGTTTTGGGCAGATGCTGAATCACGTTTAGACTATGCTGCTTTTGGTGGTGTTGTTATTTTCGATAGCACTTACCGTGTGAACAAGTACAATCTTCCTTTCATTCCTTTCATAGGAGTTAACCACCACAGAAGTACAACAATTTTTGGGTGCGGAATTCTATCAAATGAGTCTGTCAACTCTTACTGTTGGCTCCTTGAGACTTTTTTGGAGGCAATGCGTCAAGTGCATCCAAAATCATTAATTACCGATGGCGACCTAGCAATGGCGAAGGCTATCAGTAAGGTAATGCCGGGTGCTTACCATAGATTGTGTACTTGGCATATAGAGGAGAATATGAGTCGTCACCTTCGTAAGCCAAAACTCGACGAGCTAAGAAAATTAATTTATGAGAGTATGGATGAAGAGGAGTTCGAGAGACGTTGGGCTGATTTTAAGGAGAATGGAGGCACGGGAAATGGACAATGGATCGCTCTGATGTACCGACTAAGGGAGAAATGGGCAGCTGCCTATACAGATGGGAAATACTTGTTGGGTATGCGCAGCAACCAACGTAGTGAGTCACTGAACTCAAAGCTTCACACCCTTCTAAAGAGAAACATGTCACTAATGTGCTTAGTCAAACATGTTAAGTTGTGCATACAAGGCCTGCGTAAGAAGGAGGCTCAGTTGGACGCTAAGTCTACCAATTCGGTCCCTTTTTGTAGAATAGACGCCGACCCATTGGAGAAAGACGCTGCCCGTATATACACCGCAGTCGTGTTCAAGAAAGTCCGTGCACAGATACGGCTAATTGCAGGACTTGAAGTCATCAGTGGGACTAATCAAGATGGTTCGTCATTGTATGTTGTTGGTTTGAAGGACGATAATGAGGTGTGGGATGAAGTGAGGGTTTCTTTTAAAGGCCAGGCTTTGGAAGGTGTGGAATGTCACTGTCGGAAGATGGAGTGCGAAGACATCCCTTGCTCACACATTTTTGTTGTAGTCAAGTTCCTTGGTTTTGACACCATCCCTCGTTGTTGTGTCGTGGATAGGTGGACAATGGGAGCAAAGGCGGCATTTAGGTCAGACAGGAATGCCGATCCTAATGTGTGGTCTGAACACATGGTTCGGTACCGTAGCCTCCGAAATCTAGGTAGTGATGCTTTCTTCGAGGCCGCTAGGAACCCTGAGCAGACAGAAAAGGCGATGGATTTCTTAAAGGGGATTTTGGATAAAGGATCGTCATCCGATGAGAACATCGTGGCCGGAGATTTTGGTCCTATGCCAACTCACTTTTCGTCTAGTAACCAGCCATTAGAGAAGAGAGTACTTGATCCTGAAGAGATTAGGGCAAAAGGAGCTCCATCGAAGAGACGAAGGCCATTCCGTGAGACATTGCACACAAATAACCAATAA
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| CDS seq | ATGGTAAGGAAACCGACGGCAGGAGCTCTGCCGGAATTTGATTTGAGAAAAGAAAATCCGTGCAATACAGACCAGAGCGAGCAAAATAAAAATACAGATCAAGGTGGCTTAAAAGCCGAGCTACGAAGGTCTATTTCCTGCTTGACAAACGCAGGTGTGGATACCGTCCCCCAATTCCTCCCCCAACCTCGCCGCCTTGCCCGCCTCCGTCGCCGTCCGTATCGCATTGGTTCGCATCTTCGGTTCGCATCGCAGGTGAGGTCTGACATAATGACTTCGAGCTATGTGAGCCTAGAGGATCAGGAAGAGTATAAAATGATGGGTACTGTGGTTTTTTCAAGCGAGGAGGAAGGTTACAAATTCTATTTAGACTATGCAAAGGGGAAGGGTTTCAGTGTGAGGAAAAACAACCTTAAACGGAAGGACGGTGAAATTATATGGAGGCAATTCGTATGCTCATGTGAAGGGTACAGGGAGTTGAAGCACTTTGAGAGGACAGAGCGGATAAGGGAGCCACGGGCACTGACCCGCTGCGGTTGCTTAGCTAAGCTTGAGATTGAGCGGAACGAGGAGAAGGGGGTGTGGTTTGTTAAGGAGTTTGATAACCAACATACGCACGAACTTGCAAATCCAGACCATGTTGCTTTTTTAGGAGTTCATCGTGTGATGAGTGATTCTAAGAAAGCCCAAGCGGTCGAGCTTCGCATGAGTGGCCTTAGGCCCTTTCAAGTCATGGAGGTTATGGAGAATAACCACGATGAGTTAGACGAGGTTGGTTTTGTGATGAAGGACCTTTATAATTTCTTTACGCGGTACGACATGAAGAATATCAAGGGTCATGATGCTGAAGATGTGTTGAAATATCTAACAAGGAAGCAAGAAGAAGATGCAGAATTTTTCTTCAAATACACCACGGATGAGGAAGGGCGTCTTAGGAATGTGTTTTGGGCAGATGCTGAATCACGTTTAGACTATGCTGCTTTTGGTGGTGTTGTTATTTTCGATAGCACTTACCGTGTGAACAAGTACAATCTTCCTTTCATTCCTTTCATAGGAGTTAACCACCACAGAAGTACAACAATTTTTGGGTGCGGAATTCTATCAAATGAGTCTGTCAACTCTTACTGTTGGCTCCTTGAGACTTTTTTGGAGGCAATGCGTCAAGTGCATCCAAAATCATTAATTACCGATGGCGACCTAGCAATGGCGAAGGCTATCAGTAAGGTAATGCCGGGTGCTTACCATAGATTGTGTACTTGGCATATAGAGGAGAATATGAGTCGTCACCTTCGTAAGCCAAAACTCGACGAGCTAAGAAAATTAATTTATGAGAGTATGGATGAAGAGGAGTTCGAGAGACGTTGGGCTGATTTTAAGGAGAATGGAGGCACGGGAAATGGACAATGGATCGCTCTGATGTACCGACTAAGGGAGAAATGGGCAGCTGCCTATACAGATGGGAAATACTTGTTGGGTATGCGCAGCAACCAACGTAGTGAGTCACTGAACTCAAAGCTTCACACCCTTCTAAAGAGAAACATGTCACTAATGTGCTTAGTCAAACATGTTAAGTTGTGCATACAAGGCCTGCGTAAGAAGGAGGCTCAGTTGGACGCTAAGTCTACCAATTCGGTCCCTTTTTGTAGAATAGACGCCGACCCATTGGAGAAAGACGCTGCCCGTATATACACCGCAGTCGTGTTCAAGAAAGTCCGTGCACAGATACGGCTAATTGCAGGACTTGAAGTCATCAGTGGGACTAATCAAGATGGTTCGTCATTGTATGTTGTTGGTTTGAAGGACGATAATGAGGTGTGGGATGAAGTGAGGGTTTCTTTTAAAGGCCAGGCTTTGGAAGGTGTGGAATGTCACTGTCGGAAGATGGAGTGCGAAGACATCCCTTGCTCACACATTTTTGTTGTAGTCAAGTTCCTTGGTTTTGACACCATCCCTCGTTGTTGTGTCGTGGATAGGTGGACAATGGGAGCAAAGGCGGCATTTAGGTCAGACAGGAATGCCGATCCTAATGTGTGGTCTGAACACATGGTTCGGTACCGTAGCCTCCGAAATCTAGGTAGTGATGCTTTCTTCGAGGCCGCTAGGAACCCTGAGCAGACAGAAAAGGCGATGGATTTCTTAAAGGGGATTTTGGATAAAGGATCGTCATCCGATGAGAACATCGTGGCCGGAGATTTTGGTCCTATGCCAACTCACTTTTCGTCTAGTAACCAGCCATTAGAGAAGAGAGTACTTGATCCTGAAGAGATTAGGGCAAAAGGAGCTCCATCGAAGAGACGAAGGCCATTCCGTGAGACATTGCACACAAATAACCAATAA
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| Protein seq | MVRKPTAGALPEFDLRKENPCNTDQSEQNKNTDQGGLKAELRRSISCLTNAGVDTVPQFLPQPRRLARLRRRPYRIGSHLRFASQVRSDIMTSSYVSLEDQEEYKMMGTVVFSSEEEGYKFYLDYAKGKGFSVRKNNLKRKDGEIIWRQFVCSCEGYRELKHFERTERIREPRALTRCGCLAKLEIERNEEKGVWFVKEFDNQHTHELANPDHVAFLGVHRVMSDSKKAQAVELRMSGLRPFQVMEVMENNHDELDEVGFVMKDLYNFFTRYDMKNIKGHDAEDVLKYLTRKQEEDAEFFFKYTTDEEGRLRNVFWADAESRLDYAAFGGVVIFDSTYRVNKYNLPFIPFIGVNHHRSTTIFGCGILSNESVNSYCWLLETFLEAMRQVHPKSLITDGDLAMAKAISKVMPGAYHRLCTWHIEENMSRHLRKPKLDELRKLIYESMDEEEFERRWADFKENGGTGNGQWIALMYRLREKWAAAYTDGKYLLGMRSNQRSESLNSKLHTLLKRNMSLMCLVKHVKLCIQGLRKKEAQLDAKSTNSVPFCRIDADPLEKDAARIYTAVVFKKVRAQIRLIAGLEVISGTNQDGSSLYVVGLKDDNEVWDEVRVSFKGQALEGVECHCRKMECEDIPCSHIFVVVKFLGFDTIPRCCVVDRWTMGAKAAFRSDRNADPNVWSEHMVRYRSLRNLGSDAFFEAARNPEQTEKAMDFLKGILDKGSSSDENIVAGDFGPMPTHFSSSNQPLEKRVLDPEEIRAKGAPSKRRRPFRETLHTNNQ |
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| Function | Protein FAR1-RELATED SEQUENCE 5 [UniProtKB/Swiss-Prot:Q9SZL8] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os04g25100 | LOC_Os04g25100.1 | Chr04 | 14492819 | 14500640 | + | MSU_osa1r7 | ||
| CDS seq | ATGGTAAGGAAACCGACGGCAGGAGCTCTGCCGGAATTTGATTTGAGAAAAGAAAATCCGTGCAATACAGACCAGAGCGAGCAAAATAAAAATACAGATCAAGGTGGCTTAAAAGCCGAGCTACGAAGGTCTATTTCCTGCTTGACAAACGCAGGTGTGGATACCGTCCCCCAATTCCTCCCCCAACCTCGCCGCCTTGCCCGCCTCCGTCGCCGTCCGTATCGCATTGGTTCGCATCTTCGGTTCGCATCGCAGGTGAGGTCTGACATAATGACTTCGAGCTATGTGAGCCTAGAGGATCAGGAAGAGTATAAAATGATGGGTACTGTGGTTTTTTCAAGCGAGGAGGAAGGTTACAAATTCTATTTAGACTATGCAAAGGGGAAGGGTTTCAGTGTGAGGAAAAACAACCTTAAACGGAAGGACGGTGAAATTATATGGAGGCAATTCGTATGCTCATGTGAAGGGTACAGGGAGTTGAAGCACTTTGAGAGGACAGAGCGGATAAGGGAGCCACGGGCACTGACCCGCTGCGGTTGCTTAGCTAAGCTTGAGATTGAGCGGAACGAGGAGAAGGGGGTGTGGTTTGTTAAGGAGTTTGATAACCAACATACGCACGAACTTGCAAATCCAGACCATGTTGCTTTTTTAGGAGTTCATCGTGTGATGAGTGATTCTAAGAAAGCCCAAGCGGTCGAGCTTCGCATGAGTGGCCTTAGGCCCTTTCAAGTCATGGAGGTTATGGAGAATAACCACGATGAGTTAGACGAGGTTGGTTTTGTGATGAAGGACCTTTATAATTTCTTTACGCGGTACGACATGAAGAATATCAAGGGTCATGATGCTGAAGATGTGTTGAAATATCTAACAAGGAAGCAAGAAGAAGATGCAGAATTTTTCTTCAAATACACCACGGATGAGGAAGGGCGTCTTAGGAATGTGTTTTGGGCAGATGCTGAATCACGTTTAGACTATGCTGCTTTTGGTGGTGTTGTTATTTTCGATAGCACTTACCGTGTGAACAAGTACAATCTTCCTTTCATTCCTTTCATAGGAGTTAACCACCACAGAAGTACAACAATTTTTGGGTGCGGAATTCTATCAAATGAGTCTGTCAACTCTTACTGTTGGCTCCTTGAGACTTTTTTGGAGGCAATGCGTCAAGTGCATCCAAAATCATTAATTACCGATGGCGACCTAGCAATGGCGAAGGCTATCAGTAAGGTAATGCCGGGTGCTTACCATAGATTGTGTACTTGGCATATAGAGGAGAATATGAGTCGTCACCTTCGTAAGCCAAAACTCGACGAGCTAAGAAAATTAATTTATGAGAGTATGGATGAAGAGGAGTTCGAGAGACGTTGGGCTGATTTTAAGGAGAATGGAGGCACGGGAAATGGACAATGGATCGCTCTGATGTACCGACTAAGGGAGAAATGGGCAGCTGCCTATACAGATGGGAAATACTTGTTGGGTATGCGCAGCAACCAACGTAGTGAGTCACTGAACTCAAAGCTTCACACCCTTCTAAAGAGAAACATGTCACTAATGTGCTTAGTCAAACATGTTAAGTTGTGCATACAAGGCCTGCGTAAGAAGGAGGCTCAGTTGGACGCTAAGTCTACCAATTCGGTCCCTTTTTGTAGAATAGACGCCGACCCATTGGAGAAAGACGCTGCCCGTATATACACCGCAGTCGTGTTCAAGAAAGTCCGTGCACAGATACGGCTAATTGCAGGACTTGAAGTCATCAGTGGGACTAATCAAGATGGTTCGTCATTGTATGTTGTTGGTTTGAAGGACGATAATGAGGTGTGGGATGAAGTGAGGGTTTCTTTTAAAGGCCAGGCTTTGGAAGGTGTGGAATGTCACTGTCGGAAGATGGAGTGCGAAGACATCCCTTGCTCACACATTTTTGTTGTAGTCAAGTTCCTTGGTTTTGACACCATCCCTCGTTGTTGTGTCGTGGATAGGTGGACAATGGGAGCAAAGGCGGCATTTAGGTCAGACAGGAATGCCGATCCTAATGTGTGGTCTGAACACATGGTTCGGTACCGTAGCCTCCGAAATCTAGGTAGTGATGCTTTCTTCGAGGCCGCTAGGAACCCTGAGCAGACAGAAAAGGCGATGGATTTCTTAAAGGGGATTTTGGATAAAGGATCGTCATCCGATGAGAACATCGTGGCCGGAGATTTTGGTCCTATGCCAACTCACTTTTCGTCTAGTAACCAGCCATTAGAGAAGAGAGTACTTGATCCTGAAGAGATTAGGGCAAAAGGAGCTCCATCGAAGAGACGAAGGCCATTCCGTGAGACATTGCACACAAATAACCAATAA
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| Protein seq | MVRKPTAGALPEFDLRKENPCNTDQSEQNKNTDQGGLKAELRRSISCLTNAGVDTVPQFLPQPRRLARLRRRPYRIGSHLRFASQVRSDIMTSSYVSLEDQEEYKMMGTVVFSSEEEGYKFYLDYAKGKGFSVRKNNLKRKDGEIIWRQFVCSCEGYRELKHFERTERIREPRALTRCGCLAKLEIERNEEKGVWFVKEFDNQHTHELANPDHVAFLGVHRVMSDSKKAQAVELRMSGLRPFQVMEVMENNHDELDEVGFVMKDLYNFFTRYDMKNIKGHDAEDVLKYLTRKQEEDAEFFFKYTTDEEGRLRNVFWADAESRLDYAAFGGVVIFDSTYRVNKYNLPFIPFIGVNHHRSTTIFGCGILSNESVNSYCWLLETFLEAMRQVHPKSLITDGDLAMAKAISKVMPGAYHRLCTWHIEENMSRHLRKPKLDELRKLIYESMDEEEFERRWADFKENGGTGNGQWIALMYRLREKWAAAYTDGKYLLGMRSNQRSESLNSKLHTLLKRNMSLMCLVKHVKLCIQGLRKKEAQLDAKSTNSVPFCRIDADPLEKDAARIYTAVVFKKVRAQIRLIAGLEVISGTNQDGSSLYVVGLKDDNEVWDEVRVSFKGQALEGVECHCRKMECEDIPCSHIFVVVKFLGFDTIPRCCVVDRWTMGAKAAFRSDRNADPNVWSEHMVRYRSLRNLGSDAFFEAARNPEQTEKAMDFLKGILDKGSSSDENIVAGDFGPMPTHFSSSNQPLEKRVLDPEEIRAKGAPSKRRRPFRETLHTNNQ
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os09g23230 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0296034 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0014470 | SBH | 0.000000 | 0.0 | 0.243832 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0015320 | SBH | 0.049391 | 0.000000 | 0.703301 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0015040 | SBH | 0.0 | 0.0 | 0.509307 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0014630 | SBH | 0.054835 | 0.022603 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_08g0011230 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0208700 | SBH | 0 | 0.005486 | 0.436525 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_08g0011330 | SBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0264700 | SBH | 0.0962495 | 0 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0014420 | SBH | 0.063702 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0007060 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_08g0010860 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0008110 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0014980 | SBH | 0.000000 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_08G011110 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_08g0011990 | SBH | 0.0 | 0.0 | 0.0 |
