Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
LOC_Os04g18600 OGI:04032620 | 1/16 Nipponbare | IRGSP 1.0 | MSU Chr04:10274276-10279767
Gene Symbol -
DNA seq

ATGCCGCGTTACAAGCCTGAGTACCTGTTTGGTGTTGAGGGTTTTGTCCAGGAGTTGCGTACGATGTCCTTTGTCATTGGATTTGGGACTGCCCCTTTTTATGCCCAGATTCCTCATGATCGTCATGAAGAGAAGTGCCGAGTCAAAGTCACCTTGAACAGCAATAGTGAAGAGGTCCCCTCAGTGATGTTTGAAGCTGGAGGAAGAAACTACATCCATGCATGTCAGGAAGTGGCAAGGATCGCCATAGGAGAGCTCCGTGATCGCTACAGTGATCAATTGGCCGACACTGAGTATCGTTACCATCCTCGCCAACCCCAGGGAAGTGACCGTGGCAGTTACCTTGAGACTGAAGGAATTGAGAATGATGCTACCACGAAACATTTGGTTGAGATGTTGTGGGCTATGGATGAAAGTCGTGCGGAGACTGTGTTAGCAGCTCAAGATCGTGAAGACCGGAATCGTGGTAAGATTTGCAAGTTAGAAGACAAGGTGGATCGTTTGGAGAAGGAATTAGCCGCATTGAAGGGAGAAGCACCGCCGCAGAAGGCCAGGATTCGTCTTACCGCAAGGAAGAGAGCTCTATTTGTCCCTCGCTATCAACTGGCGCCAAAGGTTCGTGTGGTGGAGAAAGAAGTTGCCCCAGCACAAGCGGATCCTCCGGTCATCATCATAAGTAGTGATGAAGAAGAAGAATCCAAGCGCAACCATTCCAAGTTTGAGTGGGTAGCTATCAAAGATGAGGAAGATGAGCCAAACGAGCCTTCAATCGACCTCCTATGCTCGGAAGAACTAGAGTGACTTGTTAAGTCGTTGTCTTAGATCGTTGTGTTAGTTTGCTTGCTTAAAGTTTGCTTGTGTGTGTGGGTCTTGCATGTGATTTACATCAGTGGTGGGATGTAAGTGCATGCGTTTGTTTGCTTTTGAGTGTTAGGAAGTTGGTGAGTTTAGTGGTGTGAGAGTCTTCAGTTTGTAATAATGAAACTCAGTTAAGATCAATAAAAGTTAAAGTAATTCTCTGTCCTAAGTAGTTTTCCCCGTTTTCTCTTCTTGTGCCCAGTCCATGCCAGATGGTGAACACTCGTAGCAATGGGAATGGTCCCAACAACCCCAATATCAACAACAATGGAGAGAATCCCACTCTGGCCCAAGTTCTTGCTCAACAGACACAGCTTATGAACATGATGATGCAGCAATTTCAGAATCAGCAAAACCAAGGAAATAATCATGCACCTCCCCAAAACAAGTTAGCAGAATTTCTTCGTGTGAGGCCGCCTGTTTTCTCTAGTACCACTAATCCTGTTGAAGCTAGTGATTGGCTGCATGCCATAGAGAAGAAGTTGGATTTACTTCAGTGTACTGATCAGGAGAAGGTCTCATTTGCATCACATCAGTTGCATGGCCCTGCCTCTGAATGGTGGGATCACTTCCGCCTTAACAGGACTACTGCTGAACCTATCACTTGGCTTGAATTCACCGCTGCTTTCCGGAAGACGCATATACCATCGGGAGTAGTGTCTCTCAAGAAGAAGGAGTTCAGGTCGCTTTCCCAGGGAACTCGCTCTGTTACGGAGTATCTGCACGAGTTCAATCGTCTTGCTCGTTATGCTCCGGAAGATGTGCGCAATGATGAAGAGCGCCAGGAGAAGTTTTTGGGAGGACTTAATGATGAGCTTTCTTACCCACTCATGGTTGGAGATTATCCTGATTTTCAGAAATTAGTGGATAAGGCTATTCGTCAGGAGGACAAGTACAATCGCATGGAGCAGAAGAAACGTCGGATTGCTCAATTCAAGACACAACAGGGAAATAATCAGAAGCCGCGTCTTACTTTAGGACCCCAGCCCATGCCACAGGGAGGTTCTTCGTCTGTTGTTCGTCCGCAACGTCAGTTCTTCAACAACAATGCTGGCAACAACATCCGTAATCAAGCTCCACGTCCTATTGCAGCTCCAACACAGCAACAACCTGCCAAGAGGGAGCAAGGCAACAAGCCCGTGGTGTGTTTCAACTGTGGAGATCCAGGACATTATGCTGACAAGTGTCCGAAGCCCCGACGCGTGAAGGTTGTCCCTGCCGAGAATAACTCTGCTGTACCAGCATCCAAGGCTCGTGTAAATCATGTCGCTGCTGCAGAAGCTCAAGATGCTCCAGATGTGATTTTGGGTACGTTCCTTGTTAACTCAGTTCCTGCAATAGTACTTTTCGATTCTGGTGCTACACATTCATTCTTATCTATGAGTTTTGTGGGAAATCATGGGATGGAAGTAGAAGATCTTAGACGTCCTTTGATGGTTAGTACCCCAAGTAATCAAGCACTCTCTTTGCAACGTAGCCCCTCTGTCAGAATAGAAATTCAAGGAGTACCATTTCTGGCCAATCTTATCTTGTTAGAATCCAAAGACCTTGATGTCATCCTAGGGATGGACTGGTTAGCCAGACATAAAGGTGTGATAGACTGTGCCAACAGAAAAGTAACTCTCAACAGCTATGATGGTCGAGTTGTAACTGTTCCTGCATTGTCATCTGAGTCTTTAAGGTCAAGACTGAACCAGATAACTTTGGAAGAGATTCCTATAGTTCGGGAGTATCCTGATGTGTTCCCAGATGATTTACCTGGTATGCCGCCTAAAAGGGATATAGAGTTCAGAATAGATTTGGTACCTGGAACAACTCCGATCCATAAGAGACCTTATCGAATGGCAGCCAATGAGTTGGCAGAAGTTAAGAGGCAAGTAGATGATTTGCTACAGAAAGGATACATCAGACCGAGTTCATCACCATGGGGAGCTCCGGTTATTTTTGTGGAAAAGAAAGACCATACTCAGAGAATGTGTGTGGACTATCGTGCACTAAACGATGTGACTATTAAGAATAAGTATCCACTACCCAGGATTGACGATTTGTTTGATCAGCTTAAAGGTGCCACTGTTTTCTCCAAGATAGATCTTCGATCAGGGTATCATCAGCTGAGAATCAAAGAGGAAGATATACCTAAGACAGCTTTTACCACTAGGTATGGGTTGTTCGAATGTACTGTTATGTCTTTTGGACTTACCAATGCCCCTGCTTTCTTCATGAACTTGATGAATAAGGTGTTTATGGAATACTTAGACAAGTTCGTGGTGGTCTTTATTGATGACATTCTTATCTACTCTCGAACCAAAGAAGAGCATGAGGAACATCTTCGCCTTGCATTGGAGAAGCTACGAGAACATCAACTGTATGCTAAGTTTAGCAAGCGTGAATTTTGGTTGTCCGAAGTGAAATTCCTTGGTCACGTCATCTCAGCCGGAGGAGTTGCCGTCGATCCTAGTAACGTGGAATCCGTAACCAATTGGAAGCAACCAAAGACAGTTTCAGAGATTCGCAGTTTCCTAGGCCTCGCAGGATATTATCGGAGGTTTATAGAGAATTTTTCCAAGATTGCTAAGCCCATGACACGACTGCTTCAGAAAGATGTGAAGTACAAGTGGTCGGAAGAATGTGAACAGAGTTTTCAAGAATTGAAAAGTCGCTTAATATCAGCTCCTATTTTGATTTTGCCTGATCCAAAGAAGGGTTTTCAAGTGTATTGTGATGCATCCAAACTTGGGTTAGGTTGTGTTCTGATGCAAGATGGGAAGGTGGTTGCCTATGCCTCTCGACAGTTACGTCCGCATGAGAAGAACTACCCTACTCATGATATTGAGTTAGCTGCAGTCGTTCATGCATTGAAGATTTGGCGTCATTATCTTTTCGGTACTCGTACAGAAGTGTACACCGATCACAAGAGTTTAAAGTATATCTTTACTCAGCCGGATCTGAACATGAGACAACGGAGATGGTTGGAATTAATTAAGGATTATGACATGGGAATTCATTATCATCCGGGAAAGGCTAATGTTGTAGCAGACGCTCTTAGCAGGAAAGGCTATTGTAATGCTACGGAAGGACGACAGTTGCCATTGGAATTATGCAAGGAATTTGAAAGATTAAATTTGGGAATTGTCGGTAGAGGTTTCGTTGCAGCCTTAGAAGCGAAGCCCACTCTAATTGATCAAGTTAGAGAAGCCCAAATTAATGATCCTGATATTCAAGAGATCAAGAAGAATATGAGAAGAGGAAAAGCTATTGGTTTCTTGGAGGATGAGCACGGAACTGTATGGTTGGGTGAGAGAATCTGTGTCCCCGACAACAAAGATTTAAAGGATGCAATTCTGAAAGAAGCTCATGATACTTTATACTCCATTCACCCTGGTAGTACTAAGATGTACCAGGATCTTAAGGAAAGATTTTGGTGGGCAAGTATGAAGCGTGAAATCGCAGAATACGTAGCAGTATGTGATGTTTGTCAGCGAGTCAAGGCAGAACATCAGAAACCCGCCGGTTTGTTGCAACCTTTGAAGATTCCTGAATGGAAATGGGAAGAAATTGGTATGGATTTTATTACTGGTTTACCCAGAACGTCATCAGGCCATGACTCTATTTGGGTGATAGTCGACAGACTTACCAAAGTGGCTCATTTCATTCCGGTAAAGACAACTTATTCCGGAAGTCGCTTAGCGGAATTGTATATGGCAAGGATTGTGTGTTTGCATGGCGTCCCTAAGAAGATAGTGTCTGATCGAGGCAGTCAGTTTACTTCAAATTTTTGGAAGAAACTTCAGGAAGAGATGGGTTCTAAGCTGAACTTTAGTACTGCTTATCATCCGCAGACAGACGGACAAACCGAAAGGGTGAATCAAATTTTGGAAGACATGTTGAGAGCTTGTGCTTTAGACTTCGGTGGAAGTTGGGATAAGAATCTACCCTATGCAGAATTTTCGTACAACAACAGTTATCAAGCTAGTCTACAGATGGCTCCGTACGAAGCACTGTATGGTCGGAAGTGCCGCACTCCGCTTTTGTGGGATCAAACGGGAGAACGTCAGGTTTTCGGAACGGATATCCTGAGGGAAGCAGAAGAAAAGGTAAAGATCATTCAAGAAAGATTGCGAGTGGCTCAGTCTCGACATAAGAGTTATGCCGACAATCGCCGCAGAGATTTGAGTTTTGAAGAAGGAGACTATGTGTATCTTCGTGTCACGCCTTTTCGAGGAGTTCATCGTTTTCACACCAAGGGAAAATTGGCACCGCGTTTTGTGGGACCTTATAAGATTGTCAGTAGAAGAGGAGAGGTCGCTTATCAGTTGGAGTTACCTCAATCTTTGGCAGGAGTCCATAATGTGTTCCATTTGTCGCAATTGAAAAAGTGTTTAAGGGTACCTACCGAAGAAGCTAATCTTGACCAGATAGAAGTCCAAGAGGATTTGACTTATGTGGAGAAACCGATCCGTATCCTGGAATCAAATGAGAGAAGAACCAGGAATCGAGTTATCCGTTTCTGCAAAGTTCAATGGAGTAATCACTCGGAAGAAGAATCAACTTGGGAACGAGAAGATGAATTGAAGTCAGCTCATCCGCACCTGTTTGCCAGTTCTTCCGAATCTCGAGGACGAGATTCTGTTTAA

More
CDS seq

ATGCCGCGTTACAAGCCTGAGTACCTGTTTGGTGTTGAGGGTTTTGTCCAGGAGTTGCGTACGATGTCCTTTGTCATTGGATTTGGGACTGCCCCTTTTTATGCCCAGATTCCTCATGATCGTCATGAAGAGAAGTGCCGAGTCAAAGTCACCTTGAACAGCAATAGTGAAGAGGTCCCCTCAGTGATGTTTGAAGCTGGAGGAAGAAACTACATCCATGCATGTCAGGAAGTGGCAAGGATCGCCATAGGAGAGCTCCGTGATCGCTACAGTGATCAATTGGCCGACACTGAGTATCGTTACCATCCTCGCCAACCCCAGGGAAGTGACCGTGGCAGTTACCTTGAGACTGAAGGAATTGAGAATGATGCTACCACGAAACATTTGGTTGAGATGTTGTGGGCTATGGATGAAAGTCGTGCGGAGACTGTGTTAGCAGCTCAAGATCGTGAAGACCGGAATCGTGGTAAGATTTGCAAGTTAGAAGACAAGGTGGATCGTTTGGAGAAGGAATTAGCCGCATTGAAGGGAGAAGCACCGCCGCAGAAGGCCAGGATTCGTCTTACCGCAAGGAAGAGAGCTCTATTTGTCCCTCGCTATCAACTGGCGCCAAAGGTTCGTGTGGTGGAGAAAGAAGTTGCCCCAGCACAAGCGGATCCTCCGGTCATCATCATAAGTAGTGATGAAGAAGAAGAATCCAAGCGCAACCATTCCAAGTTTGAGTGGGTAGCTATCAAAGATGAGGAAGATGAGCCAAACGAGCCTTCAATCGACCTCCTATGCTCGGAAGAACTAGATCCATGCCAGATGGTGAACACTCGTAGCAATGGGAATGGTCCCAACAACCCCAATATCAACAACAATGGAGAGAATCCCACTCTGGCCCAAGTTCTTGCTCAACAGACACAGCTTATGAACATGATGATGCAGCAATTTCAGAATCAGCAAAACCAAGGAAATAATCATGCACCTCCCCAAAACAAGTTAGCAGAATTTCTTCGTGTGAGGCCGCCTGTTTTCTCTAGTACCACTAATCCTGTTGAAGCTAGTGATTGGCTGCATGCCATAGAGAAGAAGTTGGATTTACTTCAGTGTACTGATCAGGAGAAGGTCTCATTTGCATCACATCAGTTGCATGGCCCTGCCTCTGAATGGTGGGATCACTTCCGCCTTAACAGGACTACTGCTGAACCTATCACTTGGCTTGAATTCACCGCTGCTTTCCGGAAGACGCATATACCATCGGGAGTAGTGTCTCTCAAGAAGAAGGAGTTCAGGTCGCTTTCCCAGGGAACTCGCTCTGTTACGGAGTATCTGCACGAGTTCAATCGTCTTGCTCGTTATGCTCCGGAAGATGTGCGCAATGATGAAGAGCGCCAGGAGAAGTTTTTGGGAGGACTTAATGATGAGCTTTCTTACCCACTCATGGTTGGAGATTATCCTGATTTTCAGAAATTAGTGGATAAGGCTATTCGTCAGGAGGACAAGTACAATCGCATGGAGCAGAAGAAACGTCGGATTGCTCAATTCAAGACACAACAGGGAAATAATCAGAAGCCGCGTCTTACTTTAGGACCCCAGCCCATGCCACAGGGAGGTTCTTCGTCTGTTGTTCGTCCGCAACGTCAGTTCTTCAACAACAATGCTGGCAACAACATCCGTAATCAAGCTCCACGTCCTATTGCAGCTCCAACACAGCAACAACCTGCCAAGAGGGAGCAAGGCAACAAGCCCGTGGTGTGTTTCAACTGTGGAGATCCAGGACATTATGCTGACAAGTGTCCGAAGCCCCGACGCGTGAAGGTTGTCCCTGCCGAGAATAACTCTGCTGTACCAGCATCCAAGGCTCGTGTAAATCATGTCGCTGCTGCAGAAGCTCAAGATGCTCCAGATGTGATTTTGGGTACGTTCCTTGTTAACTCAGTTCCTGCAATAGTACTTTTCGATTCTGGTGCTACACATTCATTCTTATCTATGAGTTTTGTGGGAAATCATGGGATGGAAGTAGAAGATCTTAGACGTCCTTTGATGGTTAGTACCCCAAGTAATCAAGCACTCTCTTTGCAACGTAGCCCCTCTGTCAGAATAGAAATTCAAGGAGTACCATTTCTGGCCAATCTTATCTTGTTAGAATCCAAAGACCTTGATGTCATCCTAGGGATGGACTGGTTAGCCAGACATAAAGGTGTGATAGACTGTGCCAACAGAAAAGTAACTCTCAACAGCTATGATGGTCGAGTTGTAACTGTTCCTGCATTGTCATCTGAGTCTTTAAGGTCAAGACTGAACCAGATAACTTTGGAAGAGATTCCTATAGTTCGGGAGTATCCTGATGTGTTCCCAGATGATTTACCTGGTATGCCGCCTAAAAGGGATATAGAGTTCAGAATAGATTTGGTACCTGGAACAACTCCGATCCATAAGAGACCTTATCGAATGGCAGCCAATGAGTTGGCAGAAGTTAAGAGGCAAGTAGATGATTTGCTACAGAAAGGATACATCAGACCGAGTTCATCACCATGGGGAGCTCCGGTTATTTTTGTGGAAAAGAAAGACCATACTCAGAGAATGTGTGTGGACTATCGTGCACTAAACGATGTGACTATTAAGAATAAGTATCCACTACCCAGGATTGACGATTTGTTTGATCAGCTTAAAGGTGCCACTGTTTTCTCCAAGATAGATCTTCGATCAGGGTATCATCAGCTGAGAATCAAAGAGGAAGATATACCTAAGACAGCTTTTACCACTAGGTATGGGTTGTTCGAATGTACTGTTATGTCTTTTGGACTTACCAATGCCCCTGCTTTCTTCATGAACTTGATGAATAAGGTGTTTATGGAATACTTAGACAAGTTCGTGGTGGTCTTTATTGATGACATTCTTATCTACTCTCGAACCAAAGAAGAGCATGAGGAACATCTTCGCCTTGCATTGGAGAAGCTACGAGAACATCAACTGTATGCTAAGTTTAGCAAGCGTGAATTTTGGTTGTCCGAAGTGAAATTCCTTGGTCACGTCATCTCAGCCGGAGGAGTTGCCGTCGATCCTAGTAACGTGGAATCCGTAACCAATTGGAAGCAACCAAAGACAGTTTCAGAGATTCGCAGTTTCCTAGGCCTCGCAGGATATTATCGGAGGTTTATAGAGAATTTTTCCAAGATTGCTAAGCCCATGACACGACTGCTTCAGAAAGATGTGAAGTACAAGTGGTCGGAAGAATGTGAACAGAGTTTTCAAGAATTGAAAAGTCGCTTAATATCAGCTCCTATTTTGATTTTGCCTGATCCAAAGAAGGGTTTTCAAGTGTATTGTGATGCATCCAAACTTGGGTTAGGTTGTGTTCTGATGCAAGATGGGAAGGTGGTTGCCTATGCCTCTCGACAGTTACGTCCGCATGAGAAGAACTACCCTACTCATGATATTGAGTTAGCTGCAGTCGTTCATGCATTGAAGATTTGGCGTCATTATCTTTTCGGTACTCGTACAGAAGTGTACACCGATCACAAGAGTTTAAAGTATATCTTTACTCAGCCGGATCTGAACATGAGACAACGGAGATGGTTGGAATTAATTAAGGATTATGACATGGGAATTCATTATCATCCGGGAAAGGCTAATGTTGTAGCAGACGCTCTTAGCAGGAAAGGCTATTGTAATGCTACGGAAGGACGACAGTTGCCATTGGAATTATGCAAGGAATTTGAAAGATTAAATTTGGGAATTGTCGGTAGAGGTTTCGTTGCAGCCTTAGAAGCGAAGCCCACTCTAATTGATCAAGTTAGAGAAGCCCAAATTAATGATCCTGATATTCAAGAGATCAAGAAGAATATGAGAAGAGGAAAAGCTATTGGTTTCTTGGAGGATGAGCACGGAACTGTATGGTTGGGTGAGAGAATCTGTGTCCCCGACAACAAAGATTTAAAGGATGCAATTCTGAAAGAAGCTCATGATACTTTATACTCCATTCACCCTGGTAGTACTAAGATGTACCAGGATCTTAAGGAAAGATTTTGGTGGGCAAGTATGAAGCGTGAAATCGCAGAATACGTAGCAGTATGTGATGTTTGTCAGCGAGTCAAGGCAGAACATCAGAAACCCGCCGGTTTGTTGCAACCTTTGAAGATTCCTGAATGGAAATGGGAAGAAATTGGTATGGATTTTATTACTGGTTTACCCAGAACGTCATCAGGCCATGACTCTATTTGGGTGATAGTCGACAGACTTACCAAAGTGGCTCATTTCATTCCGGTAAAGACAACTTATTCCGGAAGTCGCTTAGCGGAATTGTATATGGCAAGGATTGTGTGTTTGCATGGCGTCCCTAAGAAGATAGTGTCTGATCGAGGCAGTCAGTTTACTTCAAATTTTTGGAAGAAACTTCAGGAAGAGATGGGTTCTAAGCTGAACTTTAGTACTGCTTATCATCCGCAGACAGACGGACAAACCGAAAGGGTGAATCAAATTTTGGAAGACATGTTGAGAGCTTGTGCTTTAGACTTCGGTGGAAGTTGGGATAAGAATCTACCCTATGCAGAATTTTCGTACAACAACAGTTATCAAGCTAGTCTACAGATGGCTCCGTACGAAGCACTGTATGGTCGGAAGTGCCGCACTCCGCTTTTGTGGGATCAAACGGGAGAACGTCAGGTTTTCGGAACGGATATCCTGAGGGAAGCAGAAGAAAAGGTAAAGATCATTCAAGAAAGATTGCGAGTGGCTCAGTCTCGACATAAGAGTTATGCCGACAATCGCCGCAGAGATTTGAGTTTTGAAGAAGGAGACTATGTGTATCTTCGTGTCACGCCTTTTCGAGGAGTTCATCGTTTTCACACCAAGGGAAAATTGGCACCGCGTTTTGTGGGACCTTATAAGATTGTCAGTAGAAGAGGAGAGGTCGCTTATCAGTTGGAGTTACCTCAATCTTTGGCAGGAGTCCATAATGTGTTCCATTTGTCGCAATTGAAAAAGTGTTTAAGGGTACCTACCGAAGAAGCTAATCTTGACCAGATAGAAGTCCAAGAGGATTTGACTTATGTGGAGAAACCGATCCGTATCCTGGAATCAAATGAGAGAAGAACCAGGAATCGAGTTATCCGTTTCTGCAAAGTTCAATGGAGTAATCACTCGGAAGAAGAATCAACTTGGGAACGAGAAGATGAATTGAAGTCAGCTCATCCGCACCTGTTTGCCAGTTCTTCCGAATCTCGAGGACGAGATTCTGTTTAA

More
Protein seq

MPRYKPEYLFGVEGFVQELRTMSFVIGFGTAPFYAQIPHDRHEEKCRVKVTLNSNSEEVPSVMFEAGGRNYIHACQEVARIAIGELRDRYSDQLADTEYRYHPRQPQGSDRGSYLETEGIENDATTKHLVEMLWAMDESRAETVLAAQDREDRNRGKICKLEDKVDRLEKELAALKGEAPPQKARIRLTARKRALFVPRYQLAPKVRVVEKEVAPAQADPPVIIISSDEEEESKRNHSKFEWVAIKDEEDEPNEPSIDLLCSEELDPCQMVNTRSNGNGPNNPNINNNGENPTLAQVLAQQTQLMNMMMQQFQNQQNQGNNHAPPQNKLAEFLRVRPPVFSSTTNPVEASDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDHFRLNRTTAEPITWLEFTAAFRKTHIPSGVVSLKKKEFRSLSQGTRSVTEYLHEFNRLARYAPEDVRNDEERQEKFLGGLNDELSYPLMVGDYPDFQKLVDKAIRQEDKYNRMEQKKRRIAQFKTQQGNNQKPRLTLGPQPMPQGGSSSVVRPQRQFFNNNAGNNIRNQAPRPIAAPTQQQPAKREQGNKPVVCFNCGDPGHYADKCPKPRRVKVVPAENNSAVPASKARVNHVAAAEAQDAPDVILGTFLVNSVPAIVLFDSGATHSFLSMSFVGNHGMEVEDLRRPLMVSTPSNQALSLQRSPSVRIEIQGVPFLANLILLESKDLDVILGMDWLARHKGVIDCANRKVTLNSYDGRVVTVPALSSESLRSRLNQITLEEIPIVREYPDVFPDDLPGMPPKRDIEFRIDLVPGTTPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSSSPWGAPVIFVEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIKEEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDKFVVVFIDDILIYSRTKEEHEEHLRLALEKLREHQLYAKFSKREFWLSEVKFLGHVISAGGVAVDPSNVESVTNWKQPKTVSEIRSFLGLAGYYRRFIENFSKIAKPMTRLLQKDVKYKWSEECEQSFQELKSRLISAPILILPDPKKGFQVYCDASKLGLGCVLMQDGKVVAYASRQLRPHEKNYPTHDIELAAVVHALKIWRHYLFGTRTEVYTDHKSLKYIFTQPDLNMRQRRWLELIKDYDMGIHYHPGKANVVADALSRKGYCNATEGRQLPLELCKEFERLNLGIVGRGFVAALEAKPTLIDQVREAQINDPDIQEIKKNMRRGKAIGFLEDEHGTVWLGERICVPDNKDLKDAILKEAHDTLYSIHPGSTKMYQDLKERFWWASMKREIAEYVAVCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSSGHDSIWVIVDRLTKVAHFIPVKTTYSGSRLAELYMARIVCLHGVPKKIVSDRGSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDGQTERVNQILEDMLRACALDFGGSWDKNLPYAEFSYNNSYQASLQMAPYEALYGRKCRTPLLWDQTGERQVFGTDILREAEEKVKIIQERLRVAQSRHKSYADNRRRDLSFEEGDYVYLRVTPFRGVHRFHTKGKLAPRFVGPYKIVSRRGEVAYQLELPQSLAGVHNVFHLSQLKKCLRVPTEEANLDQIEVQEDLTYVEKPIRILESNERRTRNRVIRFCKVQWSNHSEEESTWEREDELKSAHPHLFASSSESRGRDSV

Function Transposon Ty3-I Gag-Pol polyprotein [UniProtKB/Swiss-Prot:Q7LHG5]

Transcripts

Gene Transcript Chromosome Start End Strand Source
LOC_Os04g18600 LOC_Os04g18600.1 Chr04 10274276 10279767 + MSU_osa1r7
CDS seq

ATGCCGCGTTACAAGCCTGAGTACCTGTTTGGTGTTGAGGGTTTTGTCCAGGAGTTGCGTACGATGTCCTTTGTCATTGGATTTGGGACTGCCCCTTTTTATGCCCAGATTCCTCATGATCGTCATGAAGAGAAGTGCCGAGTCAAAGTCACCTTGAACAGCAATAGTGAAGAGGTCCCCTCAGTGATGTTTGAAGCTGGAGGAAGAAACTACATCCATGCATGTCAGGAAGTGGCAAGGATCGCCATAGGAGAGCTCCGTGATCGCTACAGTGATCAATTGGCCGACACTGAGTATCGTTACCATCCTCGCCAACCCCAGGGAAGTGACCGTGGCAGTTACCTTGAGACTGAAGGAATTGAGAATGATGCTACCACGAAACATTTGGTTGAGATGTTGTGGGCTATGGATGAAAGTCGTGCGGAGACTGTGTTAGCAGCTCAAGATCGTGAAGACCGGAATCGTGGTAAGATTTGCAAGTTAGAAGACAAGGTGGATCGTTTGGAGAAGGAATTAGCCGCATTGAAGGGAGAAGCACCGCCGCAGAAGGCCAGGATTCGTCTTACCGCAAGGAAGAGAGCTCTATTTGTCCCTCGCTATCAACTGGCGCCAAAGGTTCGTGTGGTGGAGAAAGAAGTTGCCCCAGCACAAGCGGATCCTCCGGTCATCATCATAAGTAGTGATGAAGAAGAAGAATCCAAGCGCAACCATTCCAAGTTTGAGTGGGTAGCTATCAAAGATGAGGAAGATGAGCCAAACGAGCCTTCAATCGACCTCCTATGCTCGGAAGAACTAGATCCATGCCAGATGGTGAACACTCGTAGCAATGGGAATGGTCCCAACAACCCCAATATCAACAACAATGGAGAGAATCCCACTCTGGCCCAAGTTCTTGCTCAACAGACACAGCTTATGAACATGATGATGCAGCAATTTCAGAATCAGCAAAACCAAGGAAATAATCATGCACCTCCCCAAAACAAGTTAGCAGAATTTCTTCGTGTGAGGCCGCCTGTTTTCTCTAGTACCACTAATCCTGTTGAAGCTAGTGATTGGCTGCATGCCATAGAGAAGAAGTTGGATTTACTTCAGTGTACTGATCAGGAGAAGGTCTCATTTGCATCACATCAGTTGCATGGCCCTGCCTCTGAATGGTGGGATCACTTCCGCCTTAACAGGACTACTGCTGAACCTATCACTTGGCTTGAATTCACCGCTGCTTTCCGGAAGACGCATATACCATCGGGAGTAGTGTCTCTCAAGAAGAAGGAGTTCAGGTCGCTTTCCCAGGGAACTCGCTCTGTTACGGAGTATCTGCACGAGTTCAATCGTCTTGCTCGTTATGCTCCGGAAGATGTGCGCAATGATGAAGAGCGCCAGGAGAAGTTTTTGGGAGGACTTAATGATGAGCTTTCTTACCCACTCATGGTTGGAGATTATCCTGATTTTCAGAAATTAGTGGATAAGGCTATTCGTCAGGAGGACAAGTACAATCGCATGGAGCAGAAGAAACGTCGGATTGCTCAATTCAAGACACAACAGGGAAATAATCAGAAGCCGCGTCTTACTTTAGGACCCCAGCCCATGCCACAGGGAGGTTCTTCGTCTGTTGTTCGTCCGCAACGTCAGTTCTTCAACAACAATGCTGGCAACAACATCCGTAATCAAGCTCCACGTCCTATTGCAGCTCCAACACAGCAACAACCTGCCAAGAGGGAGCAAGGCAACAAGCCCGTGGTGTGTTTCAACTGTGGAGATCCAGGACATTATGCTGACAAGTGTCCGAAGCCCCGACGCGTGAAGGTTGTCCCTGCCGAGAATAACTCTGCTGTACCAGCATCCAAGGCTCGTGTAAATCATGTCGCTGCTGCAGAAGCTCAAGATGCTCCAGATGTGATTTTGGGTACGTTCCTTGTTAACTCAGTTCCTGCAATAGTACTTTTCGATTCTGGTGCTACACATTCATTCTTATCTATGAGTTTTGTGGGAAATCATGGGATGGAAGTAGAAGATCTTAGACGTCCTTTGATGGTTAGTACCCCAAGTAATCAAGCACTCTCTTTGCAACGTAGCCCCTCTGTCAGAATAGAAATTCAAGGAGTACCATTTCTGGCCAATCTTATCTTGTTAGAATCCAAAGACCTTGATGTCATCCTAGGGATGGACTGGTTAGCCAGACATAAAGGTGTGATAGACTGTGCCAACAGAAAAGTAACTCTCAACAGCTATGATGGTCGAGTTGTAACTGTTCCTGCATTGTCATCTGAGTCTTTAAGGTCAAGACTGAACCAGATAACTTTGGAAGAGATTCCTATAGTTCGGGAGTATCCTGATGTGTTCCCAGATGATTTACCTGGTATGCCGCCTAAAAGGGATATAGAGTTCAGAATAGATTTGGTACCTGGAACAACTCCGATCCATAAGAGACCTTATCGAATGGCAGCCAATGAGTTGGCAGAAGTTAAGAGGCAAGTAGATGATTTGCTACAGAAAGGATACATCAGACCGAGTTCATCACCATGGGGAGCTCCGGTTATTTTTGTGGAAAAGAAAGACCATACTCAGAGAATGTGTGTGGACTATCGTGCACTAAACGATGTGACTATTAAGAATAAGTATCCACTACCCAGGATTGACGATTTGTTTGATCAGCTTAAAGGTGCCACTGTTTTCTCCAAGATAGATCTTCGATCAGGGTATCATCAGCTGAGAATCAAAGAGGAAGATATACCTAAGACAGCTTTTACCACTAGGTATGGGTTGTTCGAATGTACTGTTATGTCTTTTGGACTTACCAATGCCCCTGCTTTCTTCATGAACTTGATGAATAAGGTGTTTATGGAATACTTAGACAAGTTCGTGGTGGTCTTTATTGATGACATTCTTATCTACTCTCGAACCAAAGAAGAGCATGAGGAACATCTTCGCCTTGCATTGGAGAAGCTACGAGAACATCAACTGTATGCTAAGTTTAGCAAGCGTGAATTTTGGTTGTCCGAAGTGAAATTCCTTGGTCACGTCATCTCAGCCGGAGGAGTTGCCGTCGATCCTAGTAACGTGGAATCCGTAACCAATTGGAAGCAACCAAAGACAGTTTCAGAGATTCGCAGTTTCCTAGGCCTCGCAGGATATTATCGGAGGTTTATAGAGAATTTTTCCAAGATTGCTAAGCCCATGACACGACTGCTTCAGAAAGATGTGAAGTACAAGTGGTCGGAAGAATGTGAACAGAGTTTTCAAGAATTGAAAAGTCGCTTAATATCAGCTCCTATTTTGATTTTGCCTGATCCAAAGAAGGGTTTTCAAGTGTATTGTGATGCATCCAAACTTGGGTTAGGTTGTGTTCTGATGCAAGATGGGAAGGTGGTTGCCTATGCCTCTCGACAGTTACGTCCGCATGAGAAGAACTACCCTACTCATGATATTGAGTTAGCTGCAGTCGTTCATGCATTGAAGATTTGGCGTCATTATCTTTTCGGTACTCGTACAGAAGTGTACACCGATCACAAGAGTTTAAAGTATATCTTTACTCAGCCGGATCTGAACATGAGACAACGGAGATGGTTGGAATTAATTAAGGATTATGACATGGGAATTCATTATCATCCGGGAAAGGCTAATGTTGTAGCAGACGCTCTTAGCAGGAAAGGCTATTGTAATGCTACGGAAGGACGACAGTTGCCATTGGAATTATGCAAGGAATTTGAAAGATTAAATTTGGGAATTGTCGGTAGAGGTTTCGTTGCAGCCTTAGAAGCGAAGCCCACTCTAATTGATCAAGTTAGAGAAGCCCAAATTAATGATCCTGATATTCAAGAGATCAAGAAGAATATGAGAAGAGGAAAAGCTATTGGTTTCTTGGAGGATGAGCACGGAACTGTATGGTTGGGTGAGAGAATCTGTGTCCCCGACAACAAAGATTTAAAGGATGCAATTCTGAAAGAAGCTCATGATACTTTATACTCCATTCACCCTGGTAGTACTAAGATGTACCAGGATCTTAAGGAAAGATTTTGGTGGGCAAGTATGAAGCGTGAAATCGCAGAATACGTAGCAGTATGTGATGTTTGTCAGCGAGTCAAGGCAGAACATCAGAAACCCGCCGGTTTGTTGCAACCTTTGAAGATTCCTGAATGGAAATGGGAAGAAATTGGTATGGATTTTATTACTGGTTTACCCAGAACGTCATCAGGCCATGACTCTATTTGGGTGATAGTCGACAGACTTACCAAAGTGGCTCATTTCATTCCGGTAAAGACAACTTATTCCGGAAGTCGCTTAGCGGAATTGTATATGGCAAGGATTGTGTGTTTGCATGGCGTCCCTAAGAAGATAGTGTCTGATCGAGGCAGTCAGTTTACTTCAAATTTTTGGAAGAAACTTCAGGAAGAGATGGGTTCTAAGCTGAACTTTAGTACTGCTTATCATCCGCAGACAGACGGACAAACCGAAAGGGTGAATCAAATTTTGGAAGACATGTTGAGAGCTTGTGCTTTAGACTTCGGTGGAAGTTGGGATAAGAATCTACCCTATGCAGAATTTTCGTACAACAACAGTTATCAAGCTAGTCTACAGATGGCTCCGTACGAAGCACTGTATGGTCGGAAGTGCCGCACTCCGCTTTTGTGGGATCAAACGGGAGAACGTCAGGTTTTCGGAACGGATATCCTGAGGGAAGCAGAAGAAAAGGTAAAGATCATTCAAGAAAGATTGCGAGTGGCTCAGTCTCGACATAAGAGTTATGCCGACAATCGCCGCAGAGATTTGAGTTTTGAAGAAGGAGACTATGTGTATCTTCGTGTCACGCCTTTTCGAGGAGTTCATCGTTTTCACACCAAGGGAAAATTGGCACCGCGTTTTGTGGGACCTTATAAGATTGTCAGTAGAAGAGGAGAGGTCGCTTATCAGTTGGAGTTACCTCAATCTTTGGCAGGAGTCCATAATGTGTTCCATTTGTCGCAATTGAAAAAGTGTTTAAGGGTACCTACCGAAGAAGCTAATCTTGACCAGATAGAAGTCCAAGAGGATTTGACTTATGTGGAGAAACCGATCCGTATCCTGGAATCAAATGAGAGAAGAACCAGGAATCGAGTTATCCGTTTCTGCAAAGTTCAATGGAGTAATCACTCGGAAGAAGAATCAACTTGGGAACGAGAAGATGAATTGAAGTCAGCTCATCCGCACCTGTTTGCCAGTTCTTCCGAATCTCGAGGACGAGATTCTGTTTAA

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Protein seq

MPRYKPEYLFGVEGFVQELRTMSFVIGFGTAPFYAQIPHDRHEEKCRVKVTLNSNSEEVPSVMFEAGGRNYIHACQEVARIAIGELRDRYSDQLADTEYRYHPRQPQGSDRGSYLETEGIENDATTKHLVEMLWAMDESRAETVLAAQDREDRNRGKICKLEDKVDRLEKELAALKGEAPPQKARIRLTARKRALFVPRYQLAPKVRVVEKEVAPAQADPPVIIISSDEEEESKRNHSKFEWVAIKDEEDEPNEPSIDLLCSEELDPCQMVNTRSNGNGPNNPNINNNGENPTLAQVLAQQTQLMNMMMQQFQNQQNQGNNHAPPQNKLAEFLRVRPPVFSSTTNPVEASDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDHFRLNRTTAEPITWLEFTAAFRKTHIPSGVVSLKKKEFRSLSQGTRSVTEYLHEFNRLARYAPEDVRNDEERQEKFLGGLNDELSYPLMVGDYPDFQKLVDKAIRQEDKYNRMEQKKRRIAQFKTQQGNNQKPRLTLGPQPMPQGGSSSVVRPQRQFFNNNAGNNIRNQAPRPIAAPTQQQPAKREQGNKPVVCFNCGDPGHYADKCPKPRRVKVVPAENNSAVPASKARVNHVAAAEAQDAPDVILGTFLVNSVPAIVLFDSGATHSFLSMSFVGNHGMEVEDLRRPLMVSTPSNQALSLQRSPSVRIEIQGVPFLANLILLESKDLDVILGMDWLARHKGVIDCANRKVTLNSYDGRVVTVPALSSESLRSRLNQITLEEIPIVREYPDVFPDDLPGMPPKRDIEFRIDLVPGTTPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSSSPWGAPVIFVEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIKEEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDKFVVVFIDDILIYSRTKEEHEEHLRLALEKLREHQLYAKFSKREFWLSEVKFLGHVISAGGVAVDPSNVESVTNWKQPKTVSEIRSFLGLAGYYRRFIENFSKIAKPMTRLLQKDVKYKWSEECEQSFQELKSRLISAPILILPDPKKGFQVYCDASKLGLGCVLMQDGKVVAYASRQLRPHEKNYPTHDIELAAVVHALKIWRHYLFGTRTEVYTDHKSLKYIFTQPDLNMRQRRWLELIKDYDMGIHYHPGKANVVADALSRKGYCNATEGRQLPLELCKEFERLNLGIVGRGFVAALEAKPTLIDQVREAQINDPDIQEIKKNMRRGKAIGFLEDEHGTVWLGERICVPDNKDLKDAILKEAHDTLYSIHPGSTKMYQDLKERFWWASMKREIAEYVAVCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSSGHDSIWVIVDRLTKVAHFIPVKTTYSGSRLAELYMARIVCLHGVPKKIVSDRGSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDGQTERVNQILEDMLRACALDFGGSWDKNLPYAEFSYNNSYQASLQMAPYEALYGRKCRTPLLWDQTGERQVFGTDILREAEEKVKIIQERLRVAQSRHKSYADNRRRDLSFEEGDYVYLRVTPFRGVHRFHTKGKLAPRFVGPYKIVSRRGEVAYQLELPQSLAGVHNVFHLSQLKKCLRVPTEEANLDQIEVQEDLTYVEKPIRILESNERRTRNRVIRFCKVQWSNHSEEESTWEREDELKSAHPHLFASSSESRGRDSV

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.000000 0.000000 0.0

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_09g0375700 SBH 0.000000 0.0 0.0
Nipponbare | IRGSP 1.0 | MSU LOC_Os04g07710 SBH 0.064961 0.079452 0.0
Nipponbare | IRGSP 1.0 | RAP-db Os09g0375700 SBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) NA NA NA NA NA
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) NA NA NA NA NA
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) NA NA NA NA NA
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) NA NA NA NA NA
PR 106 | Os127742RS1 | Gramene(+IsoSeq) NA NA NA NA NA
Minghui 63 | MH63RS3 | HZAU OsMH63_06G0260600 SBH 0 0 0
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) NA NA NA NA NA
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_11G0195200 SBH 0 0 0
LIMA | Os127564RS1 | Gramene(+IsoSeq) NA NA NA NA NA
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) NA NA NA NA NA
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) NA NA NA NA NA
LIU XU | Os125827RS1 | Gramene(+IsoSeq) NA NA NA NA NA
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) NA NA NA NA NA
N22 | OsN22RS2 | Gramene(+IsoSeq) NA NA NA NA NA
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) NA NA NA NA NA
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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