Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os04g12600 | OGI:04022510 | 14/16 | Nipponbare | IRGSP 1.0 | MSU | Chr04:6976835-6979249 | ||||||||
| Gene Symbol | RLCK136, OsRLCK136, OsLecRK4, LecRK4 | ||||||||||
| DNA seq | TTATGGAAACGAGTTGACCACAGAAGATGAATCTGGAGGAGTTGGGATTGCATCCGCTCCATCAAGCATTTGAGTTACCTTCAGGATGCTGGGTCGCATAGTTGGCTCCTCCTGGAGACACCACAATGCCACTGCTACAAACCTTTCAACCTTCTTGATGTTTAACTTCGCCTCATCATCACCATCTACCAGCAGGTCGACCCTGCCACACCTATAACAGTCATTTGCCCAGTAAGTAAGAATACTTTGCTCTTCTTCTGCAGCCTCCATTTCCACATTTTGCCGGCAACAGATGAGTTCCAGAAGAATGACCCCAAAGCTGTACACATCCACCTTGGCAGTGATCCCGACGTTCTTGAACCACTCAGGGGCAACATATCCGCGGGTACCACGGATACCCGTATATGTCTGTGTTTGGTTGGTTCGGAGTAGTTTCGCTAAGCCAAAGTCTGAAATCTTTGCTATGAAATTATCATCAAGAAGGATATTTTGGGGCTTTATGTCACAGTGGATGATCTGTGTGCTGCATTCCTCATGTAAGTATAGCAGCCCCCTTGCGACACCGAGAGCAAGTTGAACTCGAAGACTCCACAGAGGCCTGACACCACTAAACAGGAATCTGTTGAGCGATCCATTAACCATGAATTCATACACCAACAGTCTCTCAGTTCCTTCATTGCAGAATCCTAGCATCCGGACCAGGTTCTTATGGTACGTCCGTCCAATGGTTTGGACCTCCACAGCAAACTCCTTTTCAGTCTCATGCTGAATCTTATCAATTTTCTTGACAGCAATGTAAGTTCCTAACTCATCTTGCAGCTGGCCTTTGTACACAATACCAGATGCACCTGTGCCCAACACCTCCTTGAATCCGTCCGTTGCCTTCTCAAGCTCTGCATAACTGAAAGCTTTGAGGGGTAATCCTGGGTCTCGTGATGGTTGCAATGGCTGGACATCCTTTCTGGTGATTGTACAGTAAGTACCGAAAAGAAGAACAGAACTCAAGGCAAAATTCGCTATCACAGAGCCTCCGAGAAGCAACGAACTTCCTAGGATCCAGAGCTTCTTGTCACTCTTCCATTTTCTAGACTTTCTGAGCTCTGGCTGCGAACTGTTGCTCTTTGGCACCTTGATAAGAACTGTTCTCTGCACTCCACTCCCCATGATCCCGTTTGATAGAGGGAGCTTCTTCTTCCAGCAGGTGTTTTCATGGAATACAGCAACAGCACAGAAGCAATCAATCAGGCAGAGCCGTCGACATTCATCCATGTCTATGGGAGTGTACCACTCATAGTCAGCCTGAGGCCAATCCACATTATTAACCAAGTTAAACTCATACTGTGCCATGGAAGCTGCCTCATCCAAATCACAGCTTTGTAGCTCGAAGTCCGGTCTGCAGCCTCTGTACTTCCTCACCTCATCAAAGAACGAGTACTGCTCCGGGCACACACAGCTTGTCTGGTTGTTGCTGCCATCAAACATGCAGTAACTATTGAATCCACAGGTGCCACTGCCTACTTTTGTCTGAGCATTGCAGATGTTTTCAGGTTGGATGCTCACTGCTGTCCATGCCTGACTCATGCTGCTGGGCTTCTTCGGGTACACATATTGCCTGAACACACCATCTGGGTCAAGCGTAGCACGATGGTAGTAGTCCTCCATGGAGCGGATCACCCCAGATGTCATGTTGAATTGTGTTCCATTCTTCATGCTCACGTATATCCTACCGGTAGTATTGAACACCAGATTGGTGACCTGATTTGTGACATTCTCATCTATGGGTGTGGACCAATATGGGTCATAAAGGTTTCCAGATGGAACTGCCATGGTATAAAGTGCAGCTCGTTGAGTTTCCATGTTAAGAAGAAACCTGCCATTGGAGTAATCTGTGGTAAGGAGTCGGCTGCGGAGCTTCATTCCAGGGGACAGCGCTTGTGTGACCAGGATGGTGTCTGTTGGGTTCTTGAAAGTTTCCCAGCTGATAGTAGAGCCTCCTGCAGCAGCAATCACAAAATTCCCGGTGTCGAGCATGCTGGCATAGGGTGCACCAGTTGCTCCTGGATTCCATACCTCTCTATTGGTGGGATCTCGGAGAGAAAGTACACCAGTTGAGGTAAACTGGAGGATGGAGCCAGATGGCACTTGTATCGGCTGTGGTTCTTGCTCACTGGTCTTGGCATACCATGTTGCCGTCTTGTCGCTGATCTTGTTGAACCAGATGGCGAGGAGGTAGAAGGAGGAGTTGCCATCGATGGGCCGGAATCCAAACGCGAAGTCGCCTGATGGCGAGAGCCATGCGTTGTTTGGCCCTTGGGTTGTTAATGATGTGCCCAAGCTGATGTTCTGAGCTTGAGCAGATGGGGAGGACAGTAGCACCAACAATTGGAGGGAGAGCAAGAAGAGTGGAGGTGCCAT
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| CDS seq | ATGGCACCTCCACTCTTCTTGCTCTCCCTCCAATTGTTGGTGCTACTGTCCTCCCCATCTGCTCAAGCTCAGAACATCAGCTTGGGCACATCATTAACAACCCAAGGGCCAAACAACGCATGGCTCTCGCCATCAGGCGACTTCGCGTTTGGATTCCGGCCCATCGATGGCAACTCCTCCTTCTACCTCCTCGCCATCTGGTTCAACAAGATCAGCGACAAGACGGCAACATGGTATGCCAAGACCAGTGAGCAAGAACCACAGCCGATACAAGTGCCATCTGGCTCCATCCTCCAGTTTACCTCAACTGGTGTACTTTCTCTCCGAGATCCCACCAATAGAGAGGTATGGAATCCAGGAGCAACTGGTGCACCCTATGCCAGCATGCTCGACACCGGGAATTTTGTGATTGCTGCTGCAGGAGGCTCTACTATCAGCTGGGAAACTTTCAAGAACCCAACAGACACCATCCTGGTCACACAAGCGCTGTCCCCTGGAATGAAGCTCCGCAGCCGACTCCTTACCACAGATTACTCCAATGGCAGGTTTCTTCTTAACATGGAAACTCAACGAGCTGCACTTTATACCATGGCAGTTCCATCTGGAAACCTTTATGACCCATATTGGTCCACACCCATAGATGAGAATGTCACAAATCAGGTCACCAATCTGGTGTTCAATACTACCGGTAGGATATACGTGAGCATGAAGAATGGAACACAATTCAACATGACATCTGGGGTGATCCGCTCCATGGAGGACTACTACCATCGTGCTACGCTTGACCCAGATGGTGTGTTCAGGCAATATGTGTACCCGAAGAAGCCCAGCAGCATGAGTCAGGCATGGACAGCAGTGAGCATCCAACCTGAAAACATCTGCAATGCTCAGACAAAAGTAGGCAGTGGCACCTGTGGATTCAATAGTTACTGCATGTTTGATGGCAGCAACAACCAGACAAGCTGTGTGTGCCCGGAGCAGTACTCGTTCTTTGATGAGGTGAGGAAGTACAGAGGCTGCAGACCGGACTTCGAGCTACAAAGCTGTGATTTGGATGAGGCAGCTTCCATGGCACAGTATGAGTTTAACTTGGTTAATAATGTGGATTGGCCTCAGGCTGACTATGAGTGGTACACTCCCATAGACATGGATGAATGTCGACGGCTCTGCCTGATTGATTGCTTCTGTGCTGTTGCTGTATTCCATGAAAACACCTGCTGGAAGAAGAAGCTCCCTCTATCAAACGGGATCATGGGGAGTGGAGTGCAGAGAACAGTTCTTATCAAGGTGCCAAAGAGCAACAGTTCGCAGCCAGAGCTCAGAAAGTCTAGAAAATGGAAGAGTGACAAGAAGCTCTGGATCCTAGGAAGTTCGTTGCTTCTCGGAGGCTCTGTGATAGCGAATTTTGCCTTGAGTTCTGTTCTTCTTTTCGGTACTTACTGTACAATCACCAGAAAGGATGTCCAGCCATTGCAACCATCACGAGACCCAGGATTACCCCTCAAAGCTTTCAGTTATGCAGAGCTTGAGAAGGCAACGGACGGATTCAAGGAGGTGTTGGGCACAGGTGCATCTGGTATTGTGTACAAAGGCCAGCTGCAAGATGAGTTAGGAACTTACATTGCTGTCAAGAAAATTGATAAGATTCAGCATGAGACTGAAAAGGAGTTTGCTGTGGAGGTCCAAACCATTGGACGGACGTACCATAAGAACCTGGTCCGGATGCTAGGATTCTGCAATGAAGGAACTGAGAGACTGTTGGTGTATGAATTCATGGTTAATGGATCGCTCAACAGATTCCTGTTTAGTGGTGTCAGGCCTCTGTGGAGTCTTCGAGTTCAACTTGCTCTCGGTGTCGCAAGGGGGCTGCTATACTTACATGAGGAATGCAGCACACAGATCATCCACTGTGACATAAAGCCCCAAAATATCCTTCTTGATGATAATTTCATAGCAAAGATTTCAGACTTTGGCTTAGCGAAACTACTCCGAACCAACCAAACACAGACATATACGGGTATCCGTGGTACCCGCGGATATGTTGCCCCTGAGTGGTTCAAGAACGTCGGGATCACTGCCAAGGTGGATGTGTACAGCTTTGGGGTCATTCTTCTGGAACTCATCTGTTGCCGGCAAAATGTGGAAATGGAGGCTGCAGAAGAAGAGCAAAGTATTCTTACTTACTGGGCAAATGACTGTTATAGGTGTGGCAGGGTCGACCTGCTGGTAGATGGTGATGATGAGGCGAAGTTAAACATCAAGAAGGTTGAAAGGTTTGTAGCAGTGGCATTGTGGTGTCTCCAGGAGGAGCCAACTATGCGACCCAGCATCCTGAAGGTAACTCAAATGCTTGATGGAGCGGATGCAATCCCAACTCCTCCAGATTCATCTTCTGTGGTCAACTCGTTTCCATAA
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| Protein seq | MAPPLFLLSLQLLVLLSSPSAQAQNISLGTSLTTQGPNNAWLSPSGDFAFGFRPIDGNSSFYLLAIWFNKISDKTATWYAKTSEQEPQPIQVPSGSILQFTSTGVLSLRDPTNREVWNPGATGAPYASMLDTGNFVIAAAGGSTISWETFKNPTDTILVTQALSPGMKLRSRLLTTDYSNGRFLLNMETQRAALYTMAVPSGNLYDPYWSTPIDENVTNQVTNLVFNTTGRIYVSMKNGTQFNMTSGVIRSMEDYYHRATLDPDGVFRQYVYPKKPSSMSQAWTAVSIQPENICNAQTKVGSGTCGFNSYCMFDGSNNQTSCVCPEQYSFFDEVRKYRGCRPDFELQSCDLDEAASMAQYEFNLVNNVDWPQADYEWYTPIDMDECRRLCLIDCFCAVAVFHENTCWKKKLPLSNGIMGSGVQRTVLIKVPKSNSSQPELRKSRKWKSDKKLWILGSSLLLGGSVIANFALSSVLLFGTYCTITRKDVQPLQPSRDPGLPLKAFSYAELEKATDGFKEVLGTGASGIVYKGQLQDELGTYIAVKKIDKIQHETEKEFAVEVQTIGRTYHKNLVRMLGFCNEGTERLLVYEFMVNGSLNRFLFSGVRPLWSLRVQLALGVARGLLYLHEECSTQIIHCDIKPQNILLDDNFIAKISDFGLAKLLRTNQTQTYTGIRGTRGYVAPEWFKNVGITAKVDVYSFGVILLELICCRQNVEMEAAEEEQSILTYWANDCYRCGRVDLLVDGDDEAKLNIKKVERFVAVALWCLQEEPTMRPSILKVTQMLDGADAIPTPPDSSSVVNSFP |
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| Function | G-type lectin S-receptor-like serine/threonine-protein kinase LECRK4 [UniProtKB/Swiss-Prot:Q7FAZ0] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os04g12600 | LOC_Os04g12600.1 | Chr04 | 6976835 | 6979249 | - | MSU_osa1r7 | ||
| CDS seq | ATGGCACCTCCACTCTTCTTGCTCTCCCTCCAATTGTTGGTGCTACTGTCCTCCCCATCTGCTCAAGCTCAGAACATCAGCTTGGGCACATCATTAACAACCCAAGGGCCAAACAACGCATGGCTCTCGCCATCAGGCGACTTCGCGTTTGGATTCCGGCCCATCGATGGCAACTCCTCCTTCTACCTCCTCGCCATCTGGTTCAACAAGATCAGCGACAAGACGGCAACATGGTATGCCAAGACCAGTGAGCAAGAACCACAGCCGATACAAGTGCCATCTGGCTCCATCCTCCAGTTTACCTCAACTGGTGTACTTTCTCTCCGAGATCCCACCAATAGAGAGGTATGGAATCCAGGAGCAACTGGTGCACCCTATGCCAGCATGCTCGACACCGGGAATTTTGTGATTGCTGCTGCAGGAGGCTCTACTATCAGCTGGGAAACTTTCAAGAACCCAACAGACACCATCCTGGTCACACAAGCGCTGTCCCCTGGAATGAAGCTCCGCAGCCGACTCCTTACCACAGATTACTCCAATGGCAGGTTTCTTCTTAACATGGAAACTCAACGAGCTGCACTTTATACCATGGCAGTTCCATCTGGAAACCTTTATGACCCATATTGGTCCACACCCATAGATGAGAATGTCACAAATCAGGTCACCAATCTGGTGTTCAATACTACCGGTAGGATATACGTGAGCATGAAGAATGGAACACAATTCAACATGACATCTGGGGTGATCCGCTCCATGGAGGACTACTACCATCGTGCTACGCTTGACCCAGATGGTGTGTTCAGGCAATATGTGTACCCGAAGAAGCCCAGCAGCATGAGTCAGGCATGGACAGCAGTGAGCATCCAACCTGAAAACATCTGCAATGCTCAGACAAAAGTAGGCAGTGGCACCTGTGGATTCAATAGTTACTGCATGTTTGATGGCAGCAACAACCAGACAAGCTGTGTGTGCCCGGAGCAGTACTCGTTCTTTGATGAGGTGAGGAAGTACAGAGGCTGCAGACCGGACTTCGAGCTACAAAGCTGTGATTTGGATGAGGCAGCTTCCATGGCACAGTATGAGTTTAACTTGGTTAATAATGTGGATTGGCCTCAGGCTGACTATGAGTGGTACACTCCCATAGACATGGATGAATGTCGACGGCTCTGCCTGATTGATTGCTTCTGTGCTGTTGCTGTATTCCATGAAAACACCTGCTGGAAGAAGAAGCTCCCTCTATCAAACGGGATCATGGGGAGTGGAGTGCAGAGAACAGTTCTTATCAAGGTGCCAAAGAGCAACAGTTCGCAGCCAGAGCTCAGAAAGTCTAGAAAATGGAAGAGTGACAAGAAGCTCTGGATCCTAGGAAGTTCGTTGCTTCTCGGAGGCTCTGTGATAGCGAATTTTGCCTTGAGTTCTGTTCTTCTTTTCGGTACTTACTGTACAATCACCAGAAAGGATGTCCAGCCATTGCAACCATCACGAGACCCAGGATTACCCCTCAAAGCTTTCAGTTATGCAGAGCTTGAGAAGGCAACGGACGGATTCAAGGAGGTGTTGGGCACAGGTGCATCTGGTATTGTGTACAAAGGCCAGCTGCAAGATGAGTTAGGAACTTACATTGCTGTCAAGAAAATTGATAAGATTCAGCATGAGACTGAAAAGGAGTTTGCTGTGGAGGTCCAAACCATTGGACGGACGTACCATAAGAACCTGGTCCGGATGCTAGGATTCTGCAATGAAGGAACTGAGAGACTGTTGGTGTATGAATTCATGGTTAATGGATCGCTCAACAGATTCCTGTTTAGTGGTGTCAGGCCTCTGTGGAGTCTTCGAGTTCAACTTGCTCTCGGTGTCGCAAGGGGGCTGCTATACTTACATGAGGAATGCAGCACACAGATCATCCACTGTGACATAAAGCCCCAAAATATCCTTCTTGATGATAATTTCATAGCAAAGATTTCAGACTTTGGCTTAGCGAAACTACTCCGAACCAACCAAACACAGACATATACGGGTATCCGTGGTACCCGCGGATATGTTGCCCCTGAGTGGTTCAAGAACGTCGGGATCACTGCCAAGGTGGATGTGTACAGCTTTGGGGTCATTCTTCTGGAACTCATCTGTTGCCGGCAAAATGTGGAAATGGAGGCTGCAGAAGAAGAGCAAAGTATTCTTACTTACTGGGCAAATGACTGTTATAGGTGTGGCAGGGTCGACCTGCTGGTAGATGGTGATGATGAGGCGAAGTTAAACATCAAGAAGGTTGAAAGGTTTGTAGCAGTGGCATTGTGGTGTCTCCAGGAGGAGCCAACTATGCGACCCAGCATCCTGAAGGTAACTCAAATGCTTGATGGAGCGGATGCAATCCCAACTCCTCCAGATTCATCTTCTGTGGTCAACTCGTTTCCATAA
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| Protein seq | MAPPLFLLSLQLLVLLSSPSAQAQNISLGTSLTTQGPNNAWLSPSGDFAFGFRPIDGNSSFYLLAIWFNKISDKTATWYAKTSEQEPQPIQVPSGSILQFTSTGVLSLRDPTNREVWNPGATGAPYASMLDTGNFVIAAAGGSTISWETFKNPTDTILVTQALSPGMKLRSRLLTTDYSNGRFLLNMETQRAALYTMAVPSGNLYDPYWSTPIDENVTNQVTNLVFNTTGRIYVSMKNGTQFNMTSGVIRSMEDYYHRATLDPDGVFRQYVYPKKPSSMSQAWTAVSIQPENICNAQTKVGSGTCGFNSYCMFDGSNNQTSCVCPEQYSFFDEVRKYRGCRPDFELQSCDLDEAASMAQYEFNLVNNVDWPQADYEWYTPIDMDECRRLCLIDCFCAVAVFHENTCWKKKLPLSNGIMGSGVQRTVLIKVPKSNSSQPELRKSRKWKSDKKLWILGSSLLLGGSVIANFALSSVLLFGTYCTITRKDVQPLQPSRDPGLPLKAFSYAELEKATDGFKEVLGTGASGIVYKGQLQDELGTYIAVKKIDKIQHETEKEFAVEVQTIGRTYHKNLVRMLGFCNEGTERLLVYEFMVNGSLNRFLFSGVRPLWSLRVQLALGVARGLLYLHEECSTQIIHCDIKPQNILLDDNFIAKISDFGLAKLLRTNQTQTYTGIRGTRGYVAPEWFKNVGITAKVDVYSFGVILLELICCRQNVEMEAAEEEQSILTYWANDCYRCGRVDLLVDGDDEAKLNIKKVERFVAVALWCLQEEPTMRPSILKVTQMLDGADAIPTPPDSSSVVNSFP
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.273462 | 0.069730 | 0.243679 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0202800 | RBH | 0.393939 | 0.100998 | 0.951676 |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0202800 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0004110 | SBH | 0.0 | 1.078562 | 1.091011 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0004630 | SBH | 0.065914 | 0.0 | 1.154559 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0004170 | RBH | 0.0 | 0.0 | 1.355860 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0004250 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0004150 | RBH | 0.0 | 0.0 | 0.925315 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0102900 | RBH | 0.0147315 | 0.069685 | 0.0188165 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0004280 | RBH | 0.0 | 0.0 | 0.075765 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0107500 | RBH | 0.28353 | 0.7613215 | 0.103483 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0004090 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0004330 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0004170 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0004060 | RBH | 0.0 | 0.0 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0004170 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G004440 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0004170 | RBH | 0.0 | 0.0 | 0.314231 |
