Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os04g09920 | OGI:04017530 | 16/16 | Nipponbare | IRGSP 1.0 | MSU | Chr04:5332329-5334479 | ||||||||
| Gene Symbol | CYP99A3, OsCYP99A3 | ||||||||||
| DNA seq | GCAATCAGAGTAAAATCATTATCTCCATATCATTTTCACATTATTTAAACTTGTACATCTATCATTTATATCATATATAAAATGCATTCATCCACACATCCCACGGCAAAGCACGGGGTATCAACTAGTATTATTAATTTGTTTGTCCATTTCCCCAGGACAAACAAAACTTATTAAGAGGTATGCAAGCACGTAAGCGAACCGCAAGTACACCGACACACAGTCACACACATCCATCAACTTTGCATGGAAATCGGCTTATATGGTGATGCCACTAGCTGGAGATGATTCTTTCTCCTCGCCGTTGCACCAACGACGAGCTCCATGTCGATATCACCTGGCTGCATCCCATCCGGGAGGCTCCAGTCGAAGTAGTATAGAAGGCGCGCCACGATGAGTTCCAGCGTGGCCATTGCAAATATATCACCAGGGCACCTCCTTCTCCCGGTCCCAAATGGCAAGTACTCAAAACGGGAGCCTTTGAAGTCCGCTGTGCCATCCTCAAACCTCTCTGGTATGAACTTCTCCGCATCGTCCCAATACTCGGGGCTCCTCGCCATCGCCCACGAATTGATCAACACTCTGGTGCCCTCCACAATCTCATACCCTCCGATTTCGCAGGTCTCCCGACATAAATGGGGGAGTAGCAGCGGCAACACCGGATTCAGCCTCAGGGTCTCCTTGATCACCAACTTCATGTATGATAGGTTTTCAAGCAGGCCCTCGTGGTCTTGTGGGCTCTTGTTGTCGAATACTCCTCGCACCTCAGCCTGCACCTTGGCCATCACCTCTGGGTTCCTCATCAACTCCGACATGAGCCACTCGGTGGTAGATGATGTCGTCTCTGTCCCTCCCGTGAACATATCCTGAATGAAACCAACTACATGAGCAAGAATGAAGATTGAAGAAACATATACTCCCTCCGTCCCAAAATATAAGCATTTTTAGACGCTGACACGGTCTTTGAGATACTACTTTGACCAATAATTTTTATAAAAGTAAGATGTTTTAAATAAAAAGAGTTGCATGTTATAATATTTTGTTTAGTGATAAATCTAGTAACACGATTGGTCTTTTTTATTTTTTTGCTATTAATAGTCAAAGTTATAAATGCTTGACTTGTCACTATTCTAAAAATGCTTATATTTTATGATGGAGGGAGTATATATTTTTCAGCAGTAAATAAATGAAATTATTACCAGTATAATTGCCTTGACGTGTGTTGAGCTAAAGGGGAAGTCAAGCTCGCCCTGGTCCTTGATCCTGAGCAGGACGTTGACAAGGGAATCACCCGGATTCGACTCGCACTGAGCGACGATCTTGTCGAAGACGGTGTCCAGCTGCAAGCGCAGTCGCTCCAGGCGGCTCCTCAGCCCGGTCATGGCGTCGATGAACCGCAGCGACGGGAAGAGGTCGCCGAAGCAGAACCCATTGCTGAACTTGAGCGCTTCGTCCAGAGCCGTCAAGAACTGCTCCTGGAGCTCGCCGCCGCACGCCTGCCCGAACGCCGCCTTCGCGGTGAACGTGTTCGTGCACGAGATGAGCAGCGTGGCGAGGGTGAACGGCTTCTTGCCGCCGGCGGCGGCCTCGATGTTCCTGACAAGGGCCAGCGTCTCGCCGTCCCTGATCGGCGCGAGCTGCCGCACCATCTTGGTGCTGAGGAGCTCCACCGTGCAGAGCTTGCGCAGCATCCGCCAGTAGGCGCCGTAGGGCGCGAAGCCGATGTCGAGGTTGCCGTAGCAGAAGATCTCCGAGACGAGGAGGCTCGGCCGCGACGCGAAGGTGACGTCCTTGTCGCGGAGCACCTCCTGCGCCGCCGCCGGCGAGGAGATCACGACGGTGTCCACCTGCCCCGTCCGCAGGAACATCACCGGGCCGTACTTGCCGGCGAGGTCGCGGAGTGCGACCTGCGGTTGCGACCGGAGGAGGTGGAGGAGGCCGCCGACCAAGGGGAGGTTCCATGGCCCCGGAGGCCGTCTCTTCTTTGACGACGACTTGCGGGTCAGCAACGCGAGAAGAATGGGCAGGGTGACGACGGAGACGAGGGTGACGGTGGCTTCTGAGTTTATCTCCATCATCGATCGATAGATAGAGGATGTATATATGGCTTGATGATTGATTAGGTTTAATTACTTGGCAGTTTAGCTTGAC
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| CDS seq | ATGATGGAGATAAACTCAGAAGCCACCGTCACCCTCGTCTCCGTCGTCACCCTGCCCATTCTTCTCGCGTTGCTGACCCGCAAGTCGTCGTCAAAGAAGAGACGGCCTCCGGGGCCATGGAACCTCCCCTTGGTCGGCGGCCTCCTCCACCTCCTCCGGTCGCAACCGCAGGTCGCACTCCGCGACCTCGCCGGCAAGTACGGCCCGGTGATGTTCCTGCGGACGGGGCAGGTGGACACCGTCGTGATCTCCTCGCCGGCGGCGGCGCAGGAGGTGCTCCGCGACAAGGACGTCACCTTCGCGTCGCGGCCGAGCCTCCTCGTCTCGGAGATCTTCTGCTACGGCAACCTCGACATCGGCTTCGCGCCCTACGGCGCCTACTGGCGGATGCTGCGCAAGCTCTGCACGGTGGAGCTCCTCAGCACCAAGATGGTGCGGCAGCTCGCGCCGATCAGGGACGGCGAGACGCTGGCCCTTGTCAGGAACATCGAGGCCGCCGCCGGCGGCAAGAAGCCGTTCACCCTCGCCACGCTGCTCATCTCGTGCACGAACACGTTCACCGCGAAGGCGGCGTTCGGGCAGGCGTGCGGCGGCGAGCTCCAGGAGCAGTTCTTGACGGCTCTGGACGAAGCGCTCAAGTTCAGCAATGGGTTCTGCTTCGGCGACCTCTTCCCGTCGCTGCGGTTCATCGACGCCATGACCGGGCTGAGGAGCCGCCTGGAGCGACTGCGCTTGCAGCTGGACACCGTCTTCGACAAGATCGTCGCTCAGTGCGAGTCGAATCCGGGTGATTCCCTTGTCAACGTCCTGCTCAGGATCAAGGACCAGGGCGAGCTTGACTTCCCCTTTAGCTCAACACACGTCAAGGCAATTATACTGGATATGTTCACGGGAGGGACAGAGACGACATCATCTACCACCGAGTGGCTCATGTCGGAGTTGATGAGGAACCCAGAGGTGATGGCCAAGGTGCAGGCTGAGGTGCGAGGAGTATTCGACAACAAGAGCCCACAAGACCACGAGGGCCTGCTTGAAAACCTATCATACATGAAGTTGGTGATCAAGGAGACCCTGAGGCTGAATCCGGTGTTGCCGCTGCTACTCCCCCATTTATGTCGGGAGACCTGCGAAATCGGAGGGTATGAGATTGTGGAGGGCACCAGAGTGTTGATCAATTCGTGGGCGATGGCGAGGAGCCCCGAGTATTGGGACGATGCGGAGAAGTTCATACCAGAGAGGTTTGAGGATGGCACAGCGGACTTCAAAGGCTCCCGTTTTGAGTACTTGCCATTTGGGACCGGGAGAAGGAGGTGCCCTGGTGATATATTTGCAATGGCCACGCTGGAACTCATCGTGGCGCGCCTTCTATACTACTTCGACTGGAGCCTCCCGGATGGGATGCAGCCAGGTGATATCGACATGGAGCTCGTCGTTGGTGCAACGGCGAGGAGAAAGAATCATCTCCAGCTAGTGGCATCACCATATAAGCCGATTTCCATGCAAAGTTGA
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| Protein seq | MMEINSEATVTLVSVVTLPILLALLTRKSSSKKRRPPGPWNLPLVGGLLHLLRSQPQVALRDLAGKYGPVMFLRTGQVDTVVISSPAAAQEVLRDKDVTFASRPSLLVSEIFCYGNLDIGFAPYGAYWRMLRKLCTVELLSTKMVRQLAPIRDGETLALVRNIEAAAGGKKPFTLATLLISCTNTFTAKAAFGQACGGELQEQFLTALDEALKFSNGFCFGDLFPSLRFIDAMTGLRSRLERLRLQLDTVFDKIVAQCESNPGDSLVNVLLRIKDQGELDFPFSSTHVKAIILDMFTGGTETTSSTTEWLMSELMRNPEVMAKVQAEVRGVFDNKSPQDHEGLLENLSYMKLVIKETLRLNPVLPLLLPHLCRETCEIGGYEIVEGTRVLINSWAMARSPEYWDDAEKFIPERFEDGTADFKGSRFEYLPFGTGRRRCPGDIFAMATLELIVARLLYYFDWSLPDGMQPGDIDMELVVGATARRKNHLQLVASPYKPISMQS |
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| Function | 9-beta-pimara-7,15-diene oxidase [UniProtKB/Swiss-Prot:Q0JF01] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os04g09920 | LOC_Os04g09920.1 | Chr04 | 5332329 | 5334479 | - | MSU_osa1r7 | ||
| CDS seq | ATGATGGAGATAAACTCAGAAGCCACCGTCACCCTCGTCTCCGTCGTCACCCTGCCCATTCTTCTCGCGTTGCTGACCCGCAAGTCGTCGTCAAAGAAGAGACGGCCTCCGGGGCCATGGAACCTCCCCTTGGTCGGCGGCCTCCTCCACCTCCTCCGGTCGCAACCGCAGGTCGCACTCCGCGACCTCGCCGGCAAGTACGGCCCGGTGATGTTCCTGCGGACGGGGCAGGTGGACACCGTCGTGATCTCCTCGCCGGCGGCGGCGCAGGAGGTGCTCCGCGACAAGGACGTCACCTTCGCGTCGCGGCCGAGCCTCCTCGTCTCGGAGATCTTCTGCTACGGCAACCTCGACATCGGCTTCGCGCCCTACGGCGCCTACTGGCGGATGCTGCGCAAGCTCTGCACGGTGGAGCTCCTCAGCACCAAGATGGTGCGGCAGCTCGCGCCGATCAGGGACGGCGAGACGCTGGCCCTTGTCAGGAACATCGAGGCCGCCGCCGGCGGCAAGAAGCCGTTCACCCTCGCCACGCTGCTCATCTCGTGCACGAACACGTTCACCGCGAAGGCGGCGTTCGGGCAGGCGTGCGGCGGCGAGCTCCAGGAGCAGTTCTTGACGGCTCTGGACGAAGCGCTCAAGTTCAGCAATGGGTTCTGCTTCGGCGACCTCTTCCCGTCGCTGCGGTTCATCGACGCCATGACCGGGCTGAGGAGCCGCCTGGAGCGACTGCGCTTGCAGCTGGACACCGTCTTCGACAAGATCGTCGCTCAGTGCGAGTCGAATCCGGGTGATTCCCTTGTCAACGTCCTGCTCAGGATCAAGGACCAGGGCGAGCTTGACTTCCCCTTTAGCTCAACACACGTCAAGGCAATTATACTGGATATGTTCACGGGAGGGACAGAGACGACATCATCTACCACCGAGTGGCTCATGTCGGAGTTGATGAGGAACCCAGAGGTGATGGCCAAGGTGCAGGCTGAGGTGCGAGGAGTATTCGACAACAAGAGCCCACAAGACCACGAGGGCCTGCTTGAAAACCTATCATACATGAAGTTGGTGATCAAGGAGACCCTGAGGCTGAATCCGGTGTTGCCGCTGCTACTCCCCCATTTATGTCGGGAGACCTGCGAAATCGGAGGGTATGAGATTGTGGAGGGCACCAGAGTGTTGATCAATTCGTGGGCGATGGCGAGGAGCCCCGAGTATTGGGACGATGCGGAGAAGTTCATACCAGAGAGGTTTGAGGATGGCACAGCGGACTTCAAAGGCTCCCGTTTTGAGTACTTGCCATTTGGGACCGGGAGAAGGAGGTGCCCTGGTGATATATTTGCAATGGCCACGCTGGAACTCATCGTGGCGCGCCTTCTATACTACTTCGACTGGAGCCTCCCGGATGGGATGCAGCCAGGTGATATCGACATGGAGCTCGTCGTTGGTGCAACGGCGAGGAGAAAGAATCATCTCCAGCTAGTGGCATCACCATATAAGCCGATTTCCATGCAAAGTTGA
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| Protein seq | MMEINSEATVTLVSVVTLPILLALLTRKSSSKKRRPPGPWNLPLVGGLLHLLRSQPQVALRDLAGKYGPVMFLRTGQVDTVVISSPAAAQEVLRDKDVTFASRPSLLVSEIFCYGNLDIGFAPYGAYWRMLRKLCTVELLSTKMVRQLAPIRDGETLALVRNIEAAAGGKKPFTLATLLISCTNTFTAKAAFGQACGGELQEQFLTALDEALKFSNGFCFGDLFPSLRFIDAMTGLRSRLERLRLQLDTVFDKIVAQCESNPGDSLVNVLLRIKDQGELDFPFSSTHVKAIILDMFTGGTETTSSTTEWLMSELMRNPEVMAKVQAEVRGVFDNKSPQDHEGLLENLSYMKLVIKETLRLNPVLPLLLPHLCRETCEIGGYEIVEGTRVLINSWAMARSPEYWDDAEKFIPERFEDGTADFKGSRFEYLPFGTGRRRCPGDIFAMATLELIVARLLYYFDWSLPDGMQPGDIDMELVVGATARRKNHLQLVASPYKPISMQS
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.000000 | 0.276965 | 0.546400 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0178400 | RBH | 0.000000 | 0.420821 | 2.169141 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g36190 | SBH | 5.491997 | 4.239758 | 1.571104 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0178400 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0002930 | RBH | 0.0 | 0.000000 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0003500 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0003000 | RBH | 0.0 | 0.0 | 0.000000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0003190 | RBH | 0.000000 | 0.000000 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0003110 | RBH | 0.0 | 0.0 | 0.744899 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0078900 | RBH | 0.144983 | 2.8877045 | 0.007127 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0003210 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0081200 | RBH | 0.287716 | 11.302381 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0003030 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0003260 | RBH | 0.0 | 0.000000 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0003080 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0002940 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0003040 | RBH | 0.094053 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G003310 | RBH | 0.0 | 0.0 | 0.548636 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0003090 | RBH | 0.0 | 5.367353 | 0.000000 |
