Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os04g03370 | OGI:04006410 | 16/16 | Nipponbare | IRGSP 1.0 | MSU | Chr04:1446738-1448668 | ||||||||
| Gene Symbol | RLCK126, OsRLCK126 | ||||||||||
| DNA seq | CTAGCTATATAGAAGAGCAGCCTGTGGTGCCTCCTCGTATCTATTGGCAATAGAAGCCCTGGAGGCGTCATGGACTGATGAGACTGATGCAGAGTTGGTGATGAAGTTAAGGTCAGGCAAGGTGGCATCAGGCTCCAGAAGTAGTTTCATTGCTTCCTGCATGGTAGGCCGACGCTGAGTGTCAGAAGCAGAGCACCAGAGCCCCAAGATGATGACACTCTCCATCTCCCTCCTTTCAGAGTCACCAACAATCTTTACCCTTTGGTCCGTAGCCTCCACGACATCACCTTTGCTTCGGTACAGGCTGCAGATCTGCTCCCTGGATATGTCTTTGCACGCGATCTCCAACAGGACGAGGCCGAAGCTGAACACGTCTGAGTAGGGGTTGAACTTGACCTTGCCATCTTTCTTGCACTGTGGATCCATGTAATCTACCGGTCCTACAGCAGTTGTCAATACACACCCTTCCACAGTGCCTACTACAGTTGTTTGCAACGACGTTGGATCATTGTCAAGCTTCGCGATCCTTGACAAACCAAAGTCGGCAAGCTTGACATTATATTCTTTGTCTAGGAGTACGTTTCTTGGCTTGATATCTCTGTACAGGATATATGGCTTGCAGTCGTGATGTAGGTAGGATAGAGCTGAGCCAATACCCTTGGCTATATTGTACCTGATCGATCGGATATAACCAATTACTCCCTCCGTGTTGGTAATACTTGTGGTTTTGGATAATGGCACGATCTCCAAAACACAACTTTGACCATTATTTTTCATTATAATATATATATAAGTATTAAACAAATATATGATTTTATTAAAGTGACTAATCTATATATGTAGTCACCATATTTGAAAGACAAAAGTTTTAAAAATGATTCATCATCAAAGATTTTAAAGTTCAACCTCACCCTTGTCTAAAACGATCTTTGCTTAGATTTTTTTACATGACGTCTGGGTATCGACACAATATTCAATACACAAAACCTCACATTACTTTTTCCAACCAATATATTCATAGAAAATGAAAAACAACTTTATCTATATGTATATATATATGTATATATGTATATGTATATATGTATATATGTATGTATATATATATATATATATATATGTATATATAACTGGTACTCCATGGTGTCCGGGCACCAAGATTCAAATGAGTATGAAATTATTTTTTAAAGTGTTTAGGTATGATTTGAACATCTTTTGGTTAGATTTTGATTCTAGGTATATAGCATCCAAACATATAATTAGTTAGGTATGTAATAATGTATTGTGAAATAATGTTGAATTTGAGTTGTTTTGTTGCTAGGTATAGGTATGAATCAAATTCTTATGCCTAGGTATATACTAATATATATAAGTGTTTTTCCTGACTAATGTAGTATTGGTATCATTTTCATTTCAAACTCTAATAGATTTGAATCTATTAATGATTTAAAATTTTAAGGTTCGACAAGACACAGATAGTAAGTACTAGAATGTATCCAATTCAACCAAAACTCCTTATATTTTAGGATAGATGTTGATAACGGAAATAGCATAATATTTGACAATCGTGTGCTTCGCTACGTACCTCGTAGACCATGACTGTACTGCTTCTTCCTTACTCACGTGTAAGTACTCATGGAGATTGCCATTATTCATCAATTCGTAGACAAGGAAAAGCTCCTTCTCCATACTCCAACACCAGCCGCACATGAAATGGAGGATGTTCCAGCTATGTCCCCCTTAAGGAGATTCTTGTGCCTGGCTTCGCTGATGGTGGTGACTTCGGTGAAGAAGTCCTTGTGTCCTACGTTGAGCTCTTTCACAATTTTCTTCACAGCAACATCACGGCCCAACTCCTGTAGGTACCCACGGTAGACCTTACCAAATGCACCCTCCCCGAGCTTCTGATCGTCCGAGAAATTATTTGTCGCCAT
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| CDS seq | ATGGCGACAAATAATTTCTCGGACGATCAGAAGCTCGGGGAGGGTGCATTTGGTAAGGTCTACCGTGGGTACCTACAGGAGTTGGGCCGTGATGTTGCTGTGAAGAAAATTGTGAAAGAGCTCAACGTAGGACACAAGGACTTCTTCACCGAAGTCACCACCATCAGCGAAGCCAGGCACAAGAATCTCCTTAAGGGGGACATAGCTGGAACATCCTCCATTTCATGTGCGGCTGGTGTTGGAATCGTGCCATTATCCAAAACCACAAGTATTACCAACACGGAGGGAGTAATTGGTTATATCCGATCGATCAGGTACAATATAGCCAAGGGTATTGGCTCAGCTCTATCCTACCTACATCACGACTGCAAGCCATATATCCTGTACAGAGATATCAAGCCAAGAAACGTACTCCTAGACAAAGAATATAATGTCAAGCTTGCCGACTTTGGTTTGTCAAGGATCGCGAAGCTTGACAATGATCCAACGTCGTTGCAAACAACTGTAGTAGGCACTGTGGAAGGGTGTGTATTGACAACTGCTGTAGGACCGGTAGATTACATGGATCCACAGTGCAAGAAAGATGGCAAGGTCAAGTTCAACCCCTACTCAGACGTGTTCAGCTTCGGCCTCGTCCTGTTGGAGATCGCGTGCAAAGACATATCCAGGGAGCAGATCTGCAGCCTGTACCGAAGCAAAGGTGATGTCGTGGAGGCTACGGACCAAAGGGTAAAGATTGTTGGTGACTCTGAAAGGAGGGAGATGGAGAGTGTCATCATCTTGGGGCTCTGGTGCTCTGCTTCTGACACTCAGCGTCGGCCTACCATGCAGGAAGCAATGAAACTACTTCTGGAGCCTGATGCCACCTTGCCTGACCTTAACTTCATCACCAACTCTGCATCAGTCTCATCAGTCCATGACGCCTCCAGGGCTTCTATTGCCAATAGATACGAGGAGGCACCACAGGCTGCTCTTCTATATAGCTAG
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| Protein seq | MATNNFSDDQKLGEGAFGKVYRGYLQELGRDVAVKKIVKELNVGHKDFFTEVTTISEARHKNLLKGDIAGTSSISCAAGVGIVPLSKTTSITNTEGVIGYIRSIRYNIAKGIGSALSYLHHDCKPYILYRDIKPRNVLLDKEYNVKLADFGLSRIAKLDNDPTSLQTTVVGTVEGCVLTTAVGPVDYMDPQCKKDGKVKFNPYSDVFSFGLVLLEIACKDISREQICSLYRSKGDVVEATDQRVKIVGDSERREMESVIILGLWCSASDTQRRPTMQEAMKLLLEPDATLPDLNFITNSASVSSVHDASRASIANRYEEAPQAALLYS |
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| Function | L-type lectin-domain containing receptor kinase IX.1 [UniProtKB/Swiss-Prot:Q9LXA5] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os04g03370 | LOC_Os04g03370.1 | Chr04 | 1446738 | 1448668 | - | MSU_osa1r7 | ||
| CDS seq | ATGGCGACAAATAATTTCTCGGACGATCAGAAGCTCGGGGAGGGTGCATTTGGTAAGGTCTACCGTGGGTACCTACAGGAGTTGGGCCGTGATGTTGCTGTGAAGAAAATTGTGAAAGAGCTCAACGTAGGACACAAGGACTTCTTCACCGAAGTCACCACCATCAGCGAAGCCAGGCACAAGAATCTCCTTAAGGGGGACATAGCTGGAACATCCTCCATTTCATGTGCGGCTGGTGTTGGAATCGTGCCATTATCCAAAACCACAAGTATTACCAACACGGAGGGAGTAATTGGTTATATCCGATCGATCAGGTACAATATAGCCAAGGGTATTGGCTCAGCTCTATCCTACCTACATCACGACTGCAAGCCATATATCCTGTACAGAGATATCAAGCCAAGAAACGTACTCCTAGACAAAGAATATAATGTCAAGCTTGCCGACTTTGGTTTGTCAAGGATCGCGAAGCTTGACAATGATCCAACGTCGTTGCAAACAACTGTAGTAGGCACTGTGGAAGGGTGTGTATTGACAACTGCTGTAGGACCGGTAGATTACATGGATCCACAGTGCAAGAAAGATGGCAAGGTCAAGTTCAACCCCTACTCAGACGTGTTCAGCTTCGGCCTCGTCCTGTTGGAGATCGCGTGCAAAGACATATCCAGGGAGCAGATCTGCAGCCTGTACCGAAGCAAAGGTGATGTCGTGGAGGCTACGGACCAAAGGGTAAAGATTGTTGGTGACTCTGAAAGGAGGGAGATGGAGAGTGTCATCATCTTGGGGCTCTGGTGCTCTGCTTCTGACACTCAGCGTCGGCCTACCATGCAGGAAGCAATGAAACTACTTCTGGAGCCTGATGCCACCTTGCCTGACCTTAACTTCATCACCAACTCTGCATCAGTCTCATCAGTCCATGACGCCTCCAGGGCTTCTATTGCCAATAGATACGAGGAGGCACCACAGGCTGCTCTTCTATATAGCTAG
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| Protein seq | MATNNFSDDQKLGEGAFGKVYRGYLQELGRDVAVKKIVKELNVGHKDFFTEVTTISEARHKNLLKGDIAGTSSISCAAGVGIVPLSKTTSITNTEGVIGYIRSIRYNIAKGIGSALSYLHHDCKPYILYRDIKPRNVLLDKEYNVKLADFGLSRIAKLDNDPTSLQTTVVGTVEGCVLTTAVGPVDYMDPQCKKDGKVKFNPYSDVFSFGLVLLEIACKDISREQICSLYRSKGDVVEATDQRVKIVGDSERREMESVIILGLWCSASDTQRRPTMQEAMKLLLEPDATLPDLNFITNSASVSSVHDASRASIANRYEEAPQAALLYS
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.135398 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0135400 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g03530 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0135400 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0001420 | SBH | 0.0 | 0.0 | 0.000000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_10G0036800 | SBH | 0 | 0.0294375 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0001190 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
