Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os03g59730 | OGI:03094980 | 16/16 | Nipponbare | IRGSP 1.0 | MSU | Chr03:34003039-34005662 | ||||||||
| Gene Symbol | NAC71, ONAC071, ONAC71 | ||||||||||
| DNA seq | CTACACTCCATTTGGTTTGTTGGCTTCAATGTCACATGTTTTGCGGTCATCATCTATACTTAGGTCTTGTACACCTCTATCTGATTTGCTGCCCTCTTCATGAACCTTGCATTTACCCTTCTGTTTGTATGCAAAGCTATGGTACAATTTACAGAGCACCCATTCATCCAGCTGCAGAAAGTAAAAAAGAACAATGTCTTGAGAGAGCATGGGTGTAAGCTGACAAGATGAGCATGTAGAGATGTAACAAGATCAACTTATCACACTGGAAACAAGCTGCAAGACAATGCAAGATGAGGTAATCTGATGATGCTTGCATGCTATGTTAGCCCCGTTTTAAACAAACTCAAATTCTCATATAGCCTTTGATATGAATTTGCATGAAAAAAAAACCTATATGCAGTTCTCTTGTATGTTCCTCCACGAGAATTCAGTTTTAGTTTTACTACTTTCATTCTTAGAAGGCTGACATTATAAACCTGTCCAATCAAACCTAAAAGTTATAACCAATAATACGTTAAGAAGGAATGGGATTTAATACATGAAAATGGTATTATTAGTAGATTTGTCAGGTAAATTGCTTCCACACGGTTATATTTTTATGAGTTTTCTAAATATATAATTACAAAAAGTAATTATGAGATATATATACTGGAGACTATATCACTGTCTGAAATAACAAGTAAAAGAAACATAAATACAATAGCATTTTTAAGCGACTTTGACACCTACACTACAATAATATCGACCGAGATGGGATTGATATGTGGTCCAACAATCGTCACATCATATGATGTTAATATCCATTTTATGCATGTTTCAAAATGCTACTACCTCGTCCTAAAATATAGAAAGACATTATCAACTTGTTCAGATCGATTTACAGTGTTAAGTATGTGTTCCAAGCAGTTATAGATTTCTATATTTTAGGGTGAAGTGAGTATCATGTTAAAGCTTACAACTGCTAGTGCATTGAATTTGAATTGGACATACTTCCTCCGTCCCCAAAAAAAAAGACAAACCCTGGTTTCCGTGTCCAACGTTTGACCGTCCATCTTATTTAAAAAATTATGAAAAGAATTAAAAAGACAAGTCACGCATAAAATATTAATCATGTTTTATCATCTAACAACAATGAAAATACTAATTATAAAAAAATTTCATATAAGACGGACGGTCAAATGTTGGACACAGAAACCCAGGATTTATCTTTTTTTTGGGCGGAGGGAGTATAAATTAAAGGAAGTGCACCAATTTACCAGGCGGTTTGAATCTTCTTGGCCAAGTGGAATCTGAAACTGCGGGATGCGATACTCCTTCATCCTCCAGTGCGTCGCCTTCCCTCTCGGCTGATGGCCGAGCGCGAGCGTGAGGCTGTTCACCCTGCCGATCACCTCGCCGTCGTCGTCGACGACGTCGGCCTCCGCGCTGTTAGACTTCCAGTACCCCACCGCCGTCGTCTTGATCCCCCTCGCCGGCCGGACGCCGCGCTCCTTGTACCGGCTCCTCGGCGAGAACACGTACCACGCCCCGTCCAAGCTCTTCCCGAGGCCAAGATCTCCTGAAAAGAAAACAAGAACTAAGAAGTTATAATCGTGTTCGTCATCAAGAACATTACGATGGAGTGATCATAGGATCGATCGATCCATCTGACCATGGAGTTCGTCTAGGTTCAACTTGCAGACGTCCAATTGCTTGATGACGATGATGTTGGTCGGCATGGCGTCGCGGAGGTTGTATTTTGGTTTGAGGAAGTGGATGATGAGTTCTTGGTCGGTCGGCGTGAACCGCACTCCGGGGATATCGGAGTACGGGGACACCGGCCGATCCGCATCGCCGACATCGCCGTGTCGGGGAACAATGGCGAGAGCGGATGTAGCTGCAGGTGGCTCACCACCGTCGACCACCACCGCTTCCTCCGCGCTGTTCTTGCTGCTCTGGTTGTCATCTTCTTGGTTGACGTCGTCGTTGCGCTGGGCTGTAATGGCGGGAGCGGATGTAGTTGGCTGCTGCTGCTGCTGCGGCGGCGGCGGCGCCGAATGCGCGCTGGATGCGGTGGCGCCGCGGGGTCGGCCGCGGCCCCGGCGAGCGGTGGCGGCGGCGGCGGTGTTGCGGCGTCGGCGCTTGGCAGGTTCTTGCGGCGGCGCGTCTGGAACAACGGCATGGTTGCTGCCAGAGGTGGTGGCGAGCGGCGACGAGTGTACGGGAGCCGCCATGGGATGGCCGCTTCCTACCATGGCCACGCCGTCCGGCTGCTGGTGGTAGTACTGCATTTGCATGGCCGGCGGCGGGAAGAAGCGGCGGCCGGCGACGGCGGGAAGATGATCTTGTTGGTAGGCGTGCCCTGGATTGGCTTGGGAGAAGGTGGTTGGTTGCGGTTGCCATGTACGCTGCTGCTGCGGCGGCAAGGACGAGGAGGAGGAGGAGATCATCGCCGGCGAGGCCGGACTTACCGGCGACGACGTCGATTGCGTGTTTGCAGCGTAGGAGCCCGCCGCCGACGCCGAGTGGTATGGTGAGTAGTGGTTTGCCGGCAGAGGAGCTCGGACGGTGGCCATTGCCGGCGGAGGAGCTTTGGCGGTGGCCGCGGCGACCTCGCCGGCGACAGGGTTGATGGCTGCCAT
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| CDS seq | ATGGCAGCCATCAACCCTGTCGCCGGCGAGGTCGCCGCGGCCACCGCCAAAGCTCCTCCGCCGGCAATGGCCACCGTCCGAGCTCCTCTGCCGGCAAACCACTACTCACCATACCACTCGGCGTCGGCGGCGGGCTCCTACGCTGCAAACACGCAATCGACGTCGTCGCCGGTAAGTCCGGCCTCGCCGGCGATGATCTCCTCCTCCTCCTCGTCCTTGCCGCCGCAGCAGCAGCGTACATGGCAACCGCAACCAACCACCTTCTCCCAAGCCAATCCAGGGCACGCCTACCAACAAGATCATCTTCCCGCCGTCGCCGGCCGCCGCTTCTTCCCGCCGCCGGCCATGCAAATGCAGTACTACCACCAGCAGCCGGACGGCGTGGCCATGGTAGGAAGCGGCCATCCCATGGCGGCTCCCGTACACTCGTCGCCGCTCGCCACCACCTCTGGCAGCAACCATGCCGTTGTTCCAGACGCGCCGCCGCAAGAACCTGCCAAGCGCCGACGCCGCAACACCGCCGCCGCCGCCACCGCTCGCCGGGGCCGCGGCCGACCCCGCGGCGCCACCGCATCCAGCGCGCATTCGGCGCCGCCGCCGCCGCAGCAGCAGCAGCAGCCAACTACATCCGCTCCCGCCATTACAGCCCAGCGCAACGACGACGTCAACCAAGAAGATGACAACCAGAGCAGCAAGAACAGCGCGGAGGAAGCGGTGGTGGTCGACGGTGGTGAGCCACCTGCAGCTACATCCGCTCTCGCCATTGTTCCCCGACACGGCGATGTCGGCGATGCGGATCGGCCGGTGTCCCCGTACTCCGATATCCCCGGAGTGCGGTTCACGCCGACCGACCAAGAACTCATCATCCACTTCCTCAAACCAAAATACAACCTCCGCGACGCCATGCCGACCAACATCATCGTCATCAAGCAATTGGACGTCTGCAAGTTGAACCTAGACGAACTCCATGGAGATCTTGGCCTCGGGAAGAGCTTGGACGGGGCGTGGTACGTGTTCTCGCCGAGGAGCCGGTACAAGGAGCGCGGCGTCCGGCCGGCGAGGGGGATCAAGACGACGGCGGTGGGGTACTGGAAGTCTAACAGCGCGGAGGCCGACGTCGTCGACGACGACGGCGAGGTGATCGGCAGGGTGAACAGCCTCACGCTCGCGCTCGGCCATCAGCCGAGAGGGAAGGCGACGCACTGGAGGATGAAGGAGTATCGCATCCCGCAGTTTCAGATTCCACTTGGCCAAGAAGATTCAAACCGCCTGCTTACACCCATGCTCTCTCAAGACATTGTTCTTTTTTACTTTCTGCAGCTGGATGAATGGGTGCTCTGTAAATTGTACCATAGCTTTGCATACAAACAGAAGGGTAAATGCAAGGTTCATGAAGAGGGCAGCAAATCAGATAGAGGTGTACAAGACCTAAGTATAGATGATGACCGCAAAACATGTGACATTGAAGCCAACAAACCAAATGGAGTGTAG
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| Protein seq | MAAINPVAGEVAAATAKAPPPAMATVRAPLPANHYSPYHSASAAGSYAANTQSTSSPVSPASPAMISSSSSSLPPQQQRTWQPQPTTFSQANPGHAYQQDHLPAVAGRRFFPPPAMQMQYYHQQPDGVAMVGSGHPMAAPVHSSPLATTSGSNHAVVPDAPPQEPAKRRRRNTAAAATARRGRGRPRGATASSAHSAPPPPQQQQQPTTSAPAITAQRNDDVNQEDDNQSSKNSAEEAVVVDGGEPPAATSALAIVPRHGDVGDADRPVSPYSDIPGVRFTPTDQELIIHFLKPKYNLRDAMPTNIIVIKQLDVCKLNLDELHGDLGLGKSLDGAWYVFSPRSRYKERGVRPARGIKTTAVGYWKSNSAEADVVDDDGEVIGRVNSLTLALGHQPRGKATHWRMKEYRIPQFQIPLGQEDSNRLLTPMLSQDIVLFYFLQLDEWVLCKLYHSFAYKQKGKCKVHEEGSKSDRGVQDLSIDDDRKTCDIEANKPNGV |
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| Function | NAC transcription factor ONAC010 [UniProtKB/Swiss-Prot:A2YMR0] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os03g59730 | LOC_Os03g59730.1 | Chr03 | 34003039 | 34005662 | - | MSU_osa1r7 | ||
| CDS seq | ATGGCAGCCATCAACCCTGTCGCCGGCGAGGTCGCCGCGGCCACCGCCAAAGCTCCTCCGCCGGCAATGGCCACCGTCCGAGCTCCTCTGCCGGCAAACCACTACTCACCATACCACTCGGCGTCGGCGGCGGGCTCCTACGCTGCAAACACGCAATCGACGTCGTCGCCGGTAAGTCCGGCCTCGCCGGCGATGATCTCCTCCTCCTCCTCGTCCTTGCCGCCGCAGCAGCAGCGTACATGGCAACCGCAACCAACCACCTTCTCCCAAGCCAATCCAGGGCACGCCTACCAACAAGATCATCTTCCCGCCGTCGCCGGCCGCCGCTTCTTCCCGCCGCCGGCCATGCAAATGCAGTACTACCACCAGCAGCCGGACGGCGTGGCCATGGTAGGAAGCGGCCATCCCATGGCGGCTCCCGTACACTCGTCGCCGCTCGCCACCACCTCTGGCAGCAACCATGCCGTTGTTCCAGACGCGCCGCCGCAAGAACCTGCCAAGCGCCGACGCCGCAACACCGCCGCCGCCGCCACCGCTCGCCGGGGCCGCGGCCGACCCCGCGGCGCCACCGCATCCAGCGCGCATTCGGCGCCGCCGCCGCCGCAGCAGCAGCAGCAGCCAACTACATCCGCTCCCGCCATTACAGCCCAGCGCAACGACGACGTCAACCAAGAAGATGACAACCAGAGCAGCAAGAACAGCGCGGAGGAAGCGGTGGTGGTCGACGGTGGTGAGCCACCTGCAGCTACATCCGCTCTCGCCATTGTTCCCCGACACGGCGATGTCGGCGATGCGGATCGGCCGGTGTCCCCGTACTCCGATATCCCCGGAGTGCGGTTCACGCCGACCGACCAAGAACTCATCATCCACTTCCTCAAACCAAAATACAACCTCCGCGACGCCATGCCGACCAACATCATCGTCATCAAGCAATTGGACGTCTGCAAGTTGAACCTAGACGAACTCCATGGAGATCTTGGCCTCGGGAAGAGCTTGGACGGGGCGTGGTACGTGTTCTCGCCGAGGAGCCGGTACAAGGAGCGCGGCGTCCGGCCGGCGAGGGGGATCAAGACGACGGCGGTGGGGTACTGGAAGTCTAACAGCGCGGAGGCCGACGTCGTCGACGACGACGGCGAGGTGATCGGCAGGGTGAACAGCCTCACGCTCGCGCTCGGCCATCAGCCGAGAGGGAAGGCGACGCACTGGAGGATGAAGGAGTATCGCATCCCGCAGTTTCAGATTCCACTTGGCCAAGAAGATTCAAACCGCCTGCTTACACCCATGCTCTCTCAAGACATTGTTCTTTTTTACTTTCTGCAGCTGGATGAATGGGTGCTCTGTAAATTGTACCATAGCTTTGCATACAAACAGAAGGGTAAATGCAAGGTTCATGAAGAGGGCAGCAAATCAGATAGAGGTGTACAAGACCTAAGTATAGATGATGACCGCAAAACATGTGACATTGAAGCCAACAAACCAAATGGAGTGTAG
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| Protein seq | MAAINPVAGEVAAATAKAPPPAMATVRAPLPANHYSPYHSASAAGSYAANTQSTSSPVSPASPAMISSSSSSLPPQQQRTWQPQPTTFSQANPGHAYQQDHLPAVAGRRFFPPPAMQMQYYHQQPDGVAMVGSGHPMAAPVHSSPLATTSGSNHAVVPDAPPQEPAKRRRRNTAAAATARRGRGRPRGATASSAHSAPPPPQQQQQPTTSAPAITAQRNDDVNQEDDNQSSKNSAEEAVVVDGGEPPAATSALAIVPRHGDVGDADRPVSPYSDIPGVRFTPTDQELIIHFLKPKYNLRDAMPTNIIVIKQLDVCKLNLDELHGDLGLGKSLDGAWYVFSPRSRYKERGVRPARGIKTTAVGYWKSNSAEADVVDDDGEVIGRVNSLTLALGHQPRGKATHWRMKEYRIPQFQIPLGQEDSNRLLTPMLSQDIVLFYFLQLDEWVLCKLYHSFAYKQKGKCKVHEEGSKSDRGVQDLSIDDDRKTCDIEANKPNGV
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.071901 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_03g0815100 | SBH | 3.072909 | 2.099691 | 6.886815 |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | Os03g0815100 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_03g0039350 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0039020 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0039080 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0039370 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0038920 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_03G0579800 | RBH | 0.0051905 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_03g0038690 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0582300 | RBH | 0 | 0 | 0.02089 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0039250 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0039210 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0038860 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0038890 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0038950 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G038730 | RBH | 0.0 | 0.000000 | 0.000000 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0038480 | RBH | 0.0 | 0.0 | 0.0 |
