Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os03g55420 | OGI:03088430 | 15/16 | Nipponbare | IRGSP 1.0 | MSU | Chr03:31530776-31533526 | ||||||||
| Gene Symbol | prx51 | ||||||||||
| DNA seq | GAGTCTACATCACTCGACCATAACTACGCTACCAGCCACTGCGCACGCACGACTCGCACACGCTCCTCGTCCCTTCTTCTACCGCGGCCGCGCGCTGTGTCAGTAGTGCGTGTTGGTTTGGGAGAGCTAGCGCGGCCGGCACAGCATGGGAGCTGGGATTCGGATTCTGGTGGTGATGTTGGCGGTCGCCGCCGCCGGGAGCGGCGTCGTGGCGCAGCTCAGGCGGGACTACTACGCCAGCGTGTGCCCCGACGTCGAGACCATCGTGCGCGACGCGGTGACCAAGAAAGTGCAGGAGACGTCCGTCGCCGTCGGCGCCACCGTCCGCCTCTTCTTCCACGACTGCTTCGTCGAGGTTAGCTAGCTCACACACATCCATCGATAATCGATTCCTCCACGGATTTCTCGCTCGAGTCAGGTCAGGAGAATGAAGTGGCCTGGGTGTGAATGTGGGTGCAGGGATGCGACGCGTCGGTGATCGTGGTGTCGTCGGGGAACAACACGGCGGAGAAGGACCACCCGAACAACCTCTCCCTCGCCGGCGACGGCTTCGACACGGTCATCAAGGCCAGGGCGGCCGTCGACGCCGTGCCGCAGTGCACCAACCAGGTCTCCTGCGCGGACATCCTGGTCATGGCCACCCGAGACGTCATTGCGCTGGTACGTGCACACACACATGACACAAATCCTCGACAAATTAGGCTCCTTTCTTCCGAGATCCATAGAAAAGTTTCCGAGCTTTCGGAAGATCCCCTGTAAAGTAACACTGAAAAGGCTCTGTTTTCTTTTTTCTTTTTGGATCGTGCAGGCCGGCGGGCCGTCGTACGCCGTGGAGCTCGGGAGGCTGGACGGGCTGAGCTCGACGGCGAGCAGCGTCGACGGGAAGCTGCCGCCGCCGTCGTTCAACCTGGACCAGCTGACATCGCTGTTCGCCGCGAACAACCTGTCCCAGACCGACATGATCGCTTTATCTGGTAAGCAACTAATCATGCAGTTATTTAACAGTAACCGCTATCCAGAAATAATTTCACTCCACTTTAGCTTCTGTACTAGTGGAATTGTGGAACGCAACTTGTATAGACTAGTTTCTCCATGTGCTTTGTTTCATTTCATATCTTACAAGTGAAGCAAAGGGGCCCAAATCCAACGCTCAACTGTGCAATTAAAGCCAGAATTTTGAGTGGGCTCAGGAGAATTGTTGGTCAGTACAAAAACGTTTAATCCCCACAGATTAGAGGAGCAGACAGCATCATCATAGTGAGCGAAAACATTGGGTGAGTGACACTGTAGCTAGCTGATTATTCGGTGATAGTACTTAATAATAGATATAAGAGGAGTCAATGTGGAGACTGGCTGGAGGACGCCTGGATGCCGTTGCTTGCACGTGAAAAAGAGGTCAGCCTTGTATTATTGTACTAGTGCTATCAGAAACCCTGAAGGCAGGTTGCCGCTGAGGGAACGTCCAACTCCTTAATGTCGACCCGTTTATGACTATGGGCCTGCCAAATGAGCTGTCAAAACAGAAGAAAACTAATCCTCTGATATCAGTGCCACGTAGTACTCCTACAAACGGCAGGATAGAAGAGAAGCAAATTCAGGGTTCTCCTGAAAAACGCATGAACTGTCATGCTGCCAACTAGCCAATCCATTTTACTCAGTTGTTCTAGGTAGGAGTAGTTCATAGCATGAGTGGAAAACGTTTCAGTTTAGTTCAGTGTTCTGTTCTACTAGTAGCATTGCAATTCTGCAGCTGTTTCCACAGCAGTACTATATCATCCAAAATAGGAATCAACAGGTGTGGGCAGAACTGCATGTGTTTGTCTGTCACAATGTCCCATTTCTACCTTGGAATGATGGATCATAACTTCACGAGATTCATAACTATGATGACTCTGTGATAAGTTTAACATGTTCAGATAAACTAAAAAAAAGTTAACATGATTTATCTGTGCATCTGTAAACTCGTAATTTTGTCCACGCTTTCTGAAGATCTGTGCAGAATTCTGACGGAAACACTAAAAAAAGCTTCGTTTTTTTCTTTTGGCAGCGGCGCACACGGTGGGGTTCGCGCACTGCGGCACGTTCGCGAGCCGGATCCAGCCGTCGGCGGTGGACCCGACGATGGACGCCGGGTACGCGTCGCAGCTGCAGGCGGCGTGCCCGGCCGGCGTGGACCCGAACATCGCGCTGGAGCTGGACCCGGTGACGCCGCGCGCCTTCGACAACCAGTACTTCGTCAACCTCCAGAAGGGGATGGGCCTCTTCACCTCCGACCAGGTGCTCTACTCCGACGACCGCTCGCGCCCCACCGTCGACGCCTGGGCGGCCAACAGCTCCGACTTCGAGCTCGCCTTCGTCGCCGCCATGACCAACCTCGGCCGCGTCGGCGTCAAGACCGACCCGTCGCAGGGCAACATCCGCCGCGACTGCGCGATGCTCATCTGACGCCGCCGCGGGCGGCATGGTCGTCGGCACGACGACGGCGGTCAGCGGCGGCCACTGCGGTTCTCTCAATTGTTCATAAATAGTTTTAGCTGCAGCCTGCAGCGCTGAAGTTCTGAAAAATATACAACTAGCTTTTTAGAGCAAAAGTTTTAATCAGTTAATTATATTGGAAACCAGGAATTAAGATTATTTTGTGCATCTGATAGTGGTGAATCAATTAAATTACCTAGCTAGGCCAAATGTATTGTGTTTTTTAACTATGGGAGCAAGATAAATTATCTGAACATGTTGTCATTTTCATCTGCA
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| CDS seq | ATGGGAGCTGGGATTCGGATTCTGGTGGTGATGTTGGCGGTCGCCGCCGCCGGGAGCGGCGTCGTGGCGCAGCTCAGGCGGGACTACTACGCCAGCGTGTGCCCCGACGTCGAGACCATCGTGCGCGACGCGGTGACCAAGAAAGTGCAGGAGACGTCCGTCGCCGTCGGCGCCACCGTCCGCCTCTTCTTCCACGACTGCTTCGTCGAGGGATGCGACGCGTCGGTGATCGTGGTGTCGTCGGGGAACAACACGGCGGAGAAGGACCACCCGAACAACCTCTCCCTCGCCGGCGACGGCTTCGACACGGTCATCAAGGCCAGGGCGGCCGTCGACGCCGTGCCGCAGTGCACCAACCAGGTCTCCTGCGCGGACATCCTGGTCATGGCCACCCGAGACGTCATTGCGCTGGCCGGCGGGCCGTCGTACGCCGTGGAGCTCGGGAGGCTGGACGGGCTGAGCTCGACGGCGAGCAGCGTCGACGGGAAGCTGCCGCCGCCGTCGTTCAACCTGGACCAGCTGACATCGCTGTTCGCCGCGAACAACCTGTCCCAGACCGACATGATCGCTTTATCTGCGGCGCACACGGTGGGGTTCGCGCACTGCGGCACGTTCGCGAGCCGGATCCAGCCGTCGGCGGTGGACCCGACGATGGACGCCGGGTACGCGTCGCAGCTGCAGGCGGCGTGCCCGGCCGGCGTGGACCCGAACATCGCGCTGGAGCTGGACCCGGTGACGCCGCGCGCCTTCGACAACCAGTACTTCGTCAACCTCCAGAAGGGGATGGGCCTCTTCACCTCCGACCAGGTGCTCTACTCCGACGACCGCTCGCGCCCCACCGTCGACGCCTGGGCGGCCAACAGCTCCGACTTCGAGCTCGCCTTCGTCGCCGCCATGACCAACCTCGGCCGCGTCGGCGTCAAGACCGACCCGTCGCAGGGCAACATCCGCCGCGACTGCGCGATGCTCATCTGA
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| Protein seq | MGAGIRILVVMLAVAAAGSGVVAQLRRDYYASVCPDVETIVRDAVTKKVQETSVAVGATVRLFFHDCFVEGCDASVIVVSSGNNTAEKDHPNNLSLAGDGFDTVIKARAAVDAVPQCTNQVSCADILVMATRDVIALAGGPSYAVELGRLDGLSSTASSVDGKLPPPSFNLDQLTSLFAANNLSQTDMIALSAAHTVGFAHCGTFASRIQPSAVDPTMDAGYASQLQAACPAGVDPNIALELDPVTPRAFDNQYFVNLQKGMGLFTSDQVLYSDDRSRPTVDAWAANSSDFELAFVAAMTNLGRVGVKTDPSQGNIRRDCAMLI |
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| Function | Peroxidase 35 [UniProtKB/Swiss-Prot:Q96510] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os03g55420 | LOC_Os03g55420.1 | Chr03 | 31530776 | 31533526 | + | MSU_osa1r7 | ||
| CDS seq | ATGGGAGCTGGGATTCGGATTCTGGTGGTGATGTTGGCGGTCGCCGCCGCCGGGAGCGGCGTCGTGGCGCAGCTCAGGCGGGACTACTACGCCAGCGTGTGCCCCGACGTCGAGACCATCGTGCGCGACGCGGTGACCAAGAAAGTGCAGGAGACGTCCGTCGCCGTCGGCGCCACCGTCCGCCTCTTCTTCCACGACTGCTTCGTCGAGGGATGCGACGCGTCGGTGATCGTGGTGTCGTCGGGGAACAACACGGCGGAGAAGGACCACCCGAACAACCTCTCCCTCGCCGGCGACGGCTTCGACACGGTCATCAAGGCCAGGGCGGCCGTCGACGCCGTGCCGCAGTGCACCAACCAGGTCTCCTGCGCGGACATCCTGGTCATGGCCACCCGAGACGTCATTGCGCTGGCCGGCGGGCCGTCGTACGCCGTGGAGCTCGGGAGGCTGGACGGGCTGAGCTCGACGGCGAGCAGCGTCGACGGGAAGCTGCCGCCGCCGTCGTTCAACCTGGACCAGCTGACATCGCTGTTCGCCGCGAACAACCTGTCCCAGACCGACATGATCGCTTTATCTGCGGCGCACACGGTGGGGTTCGCGCACTGCGGCACGTTCGCGAGCCGGATCCAGCCGTCGGCGGTGGACCCGACGATGGACGCCGGGTACGCGTCGCAGCTGCAGGCGGCGTGCCCGGCCGGCGTGGACCCGAACATCGCGCTGGAGCTGGACCCGGTGACGCCGCGCGCCTTCGACAACCAGTACTTCGTCAACCTCCAGAAGGGGATGGGCCTCTTCACCTCCGACCAGGTGCTCTACTCCGACGACCGCTCGCGCCCCACCGTCGACGCCTGGGCGGCCAACAGCTCCGACTTCGAGCTCGCCTTCGTCGCCGCCATGACCAACCTCGGCCGCGTCGGCGTCAAGACCGACCCGTCGCAGGGCAACATCCGCCGCGACTGCGCGATGCTCATCTGA
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| Protein seq | MGAGIRILVVMLAVAAAGSGVVAQLRRDYYASVCPDVETIVRDAVTKKVQETSVAVGATVRLFFHDCFVEGCDASVIVVSSGNNTAEKDHPNNLSLAGDGFDTVIKARAAVDAVPQCTNQVSCADILVMATRDVIALAGGPSYAVELGRLDGLSSTASSVDGKLPPPSFNLDQLTSLFAANNLSQTDMIALSAAHTVGFAHCGTFASRIQPSAVDPTMDAGYASQLQAACPAGVDPNIALELDPVTPRAFDNQYFVNLQKGMGLFTSDQVLYSDDRSRPTVDAWAANSSDFELAFVAAMTNLGRVGVKTDPSQGNIRRDCAMLI
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 1.254099 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_03g0762400 | RBH | 0.0 | 0.0 | 4.982882 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os07g02440 | RBH | 0.0 | 0.0 | 0.272942 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os03g0762400 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_03g0035700 | RBH | 0.0 | 4.115928 | 2.930868 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0035370 | RBH | 0.0 | 2.855477 | 1.020396 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0035460 | RBH | 0.0 | 0.000000 | 1.414993 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0035760 | RBH | 0.0 | 0.260523 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0035280 | RBH | 0.0 | 8.984636 | 4.973778 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_03G0538600 | RBH | 2.653807 | 8.9633925 | 15.660653 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_03g0035070 | RBH | 0.0 | 0.309955 | 0.472177 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0538500 | RBH | 3.3103345 | 5.1133845 | 0.6430675 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0035550 | RBH | 0.0 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0035570 | RBH | 0.0 | 8.458947 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0035230 | RBH | 0.000000 | 5.476355 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0035300 | RBH | 0.0 | 0.411382 | 0.298284 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0035250 | RBH | 0.0 | 1.069961 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G035060 | SBH | 0.426997 | 0.0 | 0.282184 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0034890 | RBH | 0.000000 | 18.509468 | 2.031006 |
