Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os03g49600 | OGI:03079690 | 16/16 | Nipponbare | IRGSP 1.0 | MSU | Chr03:28240285-28245347 | ||||||||
| Gene Symbol | BGLU7, Os3bglu7, Os3BGlu7, 3BGLU7, BGlu7, BGlu1, bglu1 | ||||||||||
| DNA seq | TTTTTGCATAGAAAACTGGCTAAATAACTCCTTTTTTTTTAATACAAAAACCTATCGCTTCAAACAACAGTTTCCTATAAAATCACCAAGCCAAATCTCATCAACTAATAAATTATAAGGCGAAATCTGATCAAACATTGATTACTCAAGATCGATCACACATCAAGAGTACACTTCTACAAGTTCACTAGACGGCCACAATTCTGATCATAGACACGAATTGCATAATCGAATCAATTTGCAGTCCTTTTATTTCCATCACATAGTTCATAGCCAGCTCTGATGCCATCCAAGCGGCAGCCTAGAACTGAACATGATGATCAATGGATGGCAACTTCAACTTCAGTCTGCGTGTCTTTCATTCTCAGTGCTTTAGCATGTCCCTGAACCAGTAGGCCGACGCCTTGGGGTGGCGCTCGAGCGTGTTGAAGTCGACGTAGACGATACCAAACTTGGACGTGTAACCTGACAGCCACTCGAAGTTGTCCAGGAGAGACCAGGCGAAGTAGCCAGCCACATTGGCGCCCTCGTCGATGGCCTTCTTCAGCTGGGTGAGGTAGCTCCTGTAGAAATGAACCCTCGTGGTGTCGCGCAAGTACTGGTCGCGGCTGAGGTTCGCAGGTTGATCCATTCCTGATGACAAGATGGAATATGTTGATATGTTCATCACTTCTGGATTACACGCAGATTGTGCAATATGGAGCGGAAAATCGAATGGAGGGATATGGGAGAAGTTCAGAGCTACCGTTTTCAGTTATGACGACTGTCGGATTCCCGTACTTCTGCTTGATGTAGTTCACACATCCGTACATCCCCCATGGCACGATGTAAAGCCAATTAGAATTTGCCTGTAAAGATCGATGGATCAACAAAGGTTTTATGAGTTATGTTACTTCTGAATTTATCAGTTTGGTCACGTCAGTAGAATGCAGTGCTAGAAGAATCTGAAGCTGGAGAAGGATACAACTGATTACTGCATACCTGTGGTCCAATTGGTTTGCCGTTTTTCGCAACTGCAGAATTTAGGGGATAAAATATTTAGGAGAATATGTCTAGCAACGATACTGATGTACAAGCGCAAGGCGAGGCGAGGCAAGGAACTCACAAACATAGGTAACCTGCCAATCGGCTGAGTAACTCGTCGGTGTCTGCTGCATCAATTGCTGGCCCTTCATGTAGCTAGCTGTGTATTGGTTGATGCCAATATAGTCAGCCGAGCCCTTGACCAATCTAGCTTGTTCAGGAGTGAACTTGGGCAGCCTATCTTTCACAAGATCTTGCATTATCTGCGGGTAATGTCCATTTATCAATGGATCAAGATACCTGGACCATTGCAACCGTTAGCAATCCTAACAATGATAATTCTTTTTCAATGAAGCTCGATAGAATTTACTGAGATTAATAAAGCTTCCATTATCTAAAAAAAATAGGCTTTCTGAGAGGATATTCTTTATGGTCTTACCAACCAATGTGGAAGTCCCTGGCTCTTTGAGCCGCTGCTTGGTCTTCAGTTGAGTTGGAAAGAGCTTCATACCAATTGAAGTCCAGAACTATTCCAACTTTGCCTTGCTGAGCTGCCTACATTTTTGAAATTATATTTCCCAAATTTAGACTGGCCAGTAGGAGATATCCGTTAAAAAAAAACAGTTGGCCCTTAATTGTCTGTTTTTTTTCTTTCTTTTCAAACTAGTATGTGGGTGGGTGTTTTGGTTGTGTGCATCTTTGTTGTGCAGAGGTCAGAAGTGTTCTTAGTATGATTGTATCACTTTGATGTAATTGACTGAGTTCAATAAAGCTTAAATTATCTAAAAAACAAGTCGAGAAAAAATACCTGATACTTAGTCCGGTATCTTGCAACAGCTGCAGCATGTGATAAGAGAAAATTATGAGCAACAATGTATGGTTCTGTTGCTGAGTTCCCACCAGCAGCGCATTTTGTGCACCTTTTAGGAGGATTTGTTCCTTGGTCATAACCAAGAAGTGCTACTATCCTTGGCTCATTAAATGTAAACCAGTGCTTGACACGATTGCCAAAGGTCTTGAAACAGAAGTCCGCGTACTCCGTGAATAGATCCCTACAGAACAAGTAGTATGAAGATAATCCAGACTTCAGAGTGTTACTTATACAGCTAGTGATGCCAGAGATACAGGATGCTGCATTTAGCTAGACAACAGGTACCAATAATCATAATGCAGTGCAGCTTTCTTTTGACAGAACAATAGAACTTTCACGTTCATAATAATTGTCATTTGTCTAGAATTGGAGCCAATTTTAGTCAGGAATTTTTGTGTTAAGAAACTGATAATTTTGTCCCAAGCATTCATACTTATCATGTGTGCTTCTATGTTTAAAACCAAGTCTAAAATAAGTCAATAACCAACAAATGACGAGAGTTCTAATAGATTAACAGACAAAAAGCTAGGATAAATTACTAATTTGACTTACGCCATTTTTGCATTCAACCAGCCTCCGTACTTCTTCTCAAGCGCAAGAGGGAGATCGTAGTGGTAAAGATTGACATAAGGAGTGATACCTGCTTGGTTTGAAGGAAATATTTAGTTATACAGCACTCAGTTTCCATGGAAGTTTGAAAGTTTCAAGTATGAGATCTTTTTCTTTTGCAGGGGATTCAAGTATGAGATCAAGCGGTACCTTTCTGCAGAAGGTAGTTTATAAGATTGTTGTAATATGCTACGCCTTCTTGGTTAACTCGTCCCTCACCATCTAGGTACACCAAAGGCGCATATTTGGCAGTAACAAATTGTCATTAAAAAAAATGATGCAGGGTATCAGGGCAACATGCTACAATCTGAGTCAGACTCAATGTACCTGGGAAGATCCTGGACCATGAGATTGAAAACCGGTAGGCATCAAAATTCAAACTTTTCATGAGATTAACATCTTCCTGTTCCAGAATGGATACACTTTTTTTTTAGATAATGGAGAATGGAAACACTTACATGTAATGTAAGACCTTGGACACGCATATTTTAGAGCATTTACAGTTATTAATGCATAGAGATGTGCCATTATACCAGCTGTTTTGTGATCTGTAGTGTTATCTTGAAGTACAGAAGTTTCATTTACTTAGCAAATCTGGGGGAGCAATTATCTGATGAAAGACAAATCTGGGCACACATGCCCTTTCTATTTACCAAAGGAAGATACAACCCCAGCCCCATCCTCCCCAAAAGGAAGTAAAAGTAGGAAAAGCACCAAATTAGCTAGAGGACTCCAAACAAAACTACTTTTTTTTTCAAAAGTTGCATGGTTGGTTTATCCATTCGATAAAAAATATTTGACGTTTAGGATAAGGTTTGGTCAAACTTTTTATGACCGGATGGAATAAAAAAAACCAGTTATGCCTAGTGCCAGGCATACCAACGCAGAGGACTTTGTGATGTACTAGCAGGGTTTCCCAAACCGCCGGGGCCGGGTTTACCGTGCCCTGGCGGTAAGCACGGTTACCGTGCGGTAACCGCTGTAATCGTGAAAAACCGTACGAAACCGTGCAAAATTTATCAAAAAATTAAATTATTTTTTAAATTTATTTGAATTTAAGGAGGTTATCGTGGTTTTTCTATTACCGTACCCCGCGGTAAGGCCAGTAACCGCGGTAACCACGCGGTTACCGACGGTAATGTAAACCCTGTGGACTAGTACCTTATAGCGATGATATTGATCTGTCGCAACATCTCCATTCTGATTTCCTGCAACATTTCCTGTTCATTGAAATGTAAAATAAAAAAAATATATTATTATGGGTGAGCTTGACAAGTTGATCACAATTCACATGATTGACGGCTCAAGATCTACAAGAATGTCAGTTTAAACTAAAACTCAAGTAGTATTCAGCTACCACTGTAGTGGAGTATATAAGGATAAAGATGCACAGATATTGGTCAACGTTCCACATCGAATTGGTCGCTGTTCAACATTCCAATTTGGCACATAATTCTAGCAAGCTGTGTCTTAATTGTAGCACTGTCGTTCACAAATGTCATAATCATTTAGCCGTATGTCACCATTCTGTCATCTAGTGGCTGTTGAGTTGAGTACTTTACTCAGATGCTGGCCTTGTTTGGATCCTCCGAGCTATTAAATAGCCCTTCGAAATCTTGCTATTTAGGATTATTAAACGTAGATTACCGATAAAACCGATTCCATAACCCCTAGTCTATTTTGCGAGACGAATCTAATGATGTATATTAATCCATAATTAGCGGCTGATTACTGTAGCATTACTGTAGCAAATCATGGATTAATATACCTCGTTAGATTCGTCTCGCAAAATAGCCTAGGGGTTATAGAATGGGTTTTGTCATTAACCTACGTTTAATACTTTTAAATAGCAAGATTCCGGAGGGCTATTTAATAGCCCTCCGGATCCAAACGGGGCCGCTGTATAGTAGACTAACAGTTGTGATTTGTGAAATATATATTTTTGGGCACTAAGTAGTGTATTGTACTGCAACTGTAAGTAATTGAATACCGAAACTGCCATAGCGGTTTGGAAAAAAGAAAATCACAGTTTCGAAGCCAAGAAGCAGAGTTAAAACTGAGTGACAGCAAAAGTAGAGTAGAGCAAGCGACTAATCGCAGTTTTACCCGGGGTGTGCGCGAAGGCGTCCCAGATGGACGGCCCGCGGCCGCCGGACGCCGCCATGCCCTCGACCTGGTACGCGGACGTGGCCGTCCCGAACACGAACCGCTTGGGGAACGCGGCGCGGCTCAGCCCGCCCAGCCAGTTGGGCTTGGGCACCGCCGCGGCACCAGCATCCCGCGCCGCCAACAGCGCGAGCGCCAGCACCAGCACCAGCGCGCAGTTCGCTCGCCGTGCAGCCATCACGACCGCGCGCGGCCGGAGCACACCGCCGGCAGGCGGCGGCAGCAGTTGTTCACACAGTGAGACCAAGCAGTAGCGCAAGCACACGCAGCCACGCACGCACAGTGGCCAACTATTGGGAGTATATAGCAGCGCTGCAGCGGTAGCTGCATGTGCGTGTCTCAATGATTGTCGGTGATGGGGACCGGGCACCGGGGAGCGGAGCGTCGCGAGCGC
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| CDS seq | ATGGCTGCACGGCGAGCGAACTGCGCGCTGGTGCTGGTGCTGGCGCTCGCGCTGTTGGCGGCGCGGGATGCTGGTGCCGCGGCGGTGCCCAAGCCCAACTGGCTGGGCGGGCTGAGCCGCGCCGCGTTCCCCAAGCGGTTCGTGTTCGGGACGGCCACGTCCGCGTACCAGGTCGAGGGCATGGCGGCGTCCGGCGGCCGCGGGCCGTCCATCTGGGACGCCTTCGCGCACACCCCGGGAAATGTTGCAGGAAATCAGAATGGAGATGTTGCGACAGATCAATATCATCGCTATAAGGAAGATGTTAATCTCATGAAAAGTTTGAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAGATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTATAAACTACCTTCTGCAGAAAGGTATCACTCCTTATGTCAATCTTTACCACTACGATCTCCCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGCGGATCTATTCACGGAGTACGCGGACTTCTGTTTCAAGACCTTTGGCAATCGTGTCAAGCACTGGTTTACATTTAATGAGCCAAGGATAGTAGCACTTCTTGGTTATGACCAAGGAACAAATCCTCCTAAAAGGTGCACAAAATGCGCTGCTGGTGGGAACTCAGCAACAGAACCATACATTGTTGCTCATAATTTTCTCTTATCACATGCTGCAGCTGTTGCAAGATACCGGACTAAGTATCAGGCAGCTCAGCAAGGCAAAGTTGGAATAGTTCTGGACTTCAATTGGTATGAAGCTCTTTCCAACTCAACTGAAGACCAAGCAGCGGCTCAAAGAGCCAGGGACTTCCACATTGGTTGGTATCTTGATCCATTGATAAATGGACATTACCCGCAGATAATGCAAGATCTTGTGAAAGATAGGCTGCCCAAGTTCACTCCTGAACAAGCTAGATTGGTCAAGGGCTCGGCTGACTATATTGGCATCAACCAATACACAGCTAGCTACATGAAGGGCCAGCAATTGATGCAGCAGACACCGACGAGTTACTCAGCCGATTGGCAGGTTACCTATGTTTTTGCGAAAAACGGCAAACCAATTGGACCACAGGCAAATTCTAATTGGCTTTACATCGTGCCATGGGGGATGTACGGATGTGTGAACTACATCAAGCAGAAGTACGGGAATCCGACAGTCGTCATAACTGAAAACGGAATGGATCAACCTGCGAACCTCAGCCGCGACCAGTACTTGCGCGACACCACGAGGGTTCATTTCTACAGGAGCTACCTCACCCAGCTGAAGAAGGCCATCGACGAGGGCGCCAATGTGGCTGGCTACTTCGCCTGGTCTCTCCTGGACAACTTCGAGTGGCTGTCAGGTTACACGTCCAAGTTTGGTATCGTCTACGTCGACTTCAACACGCTCGAGCGCCACCCCAAGGCGTCGGCCTACTGGTTCAGGGACATGCTAAAGCACTGA
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| Protein seq | MAARRANCALVLVLALALLAARDAGAAAVPKPNWLGGLSRAAFPKRFVFGTATSAYQVEGMAASGGRGPSIWDAFAHTPGNVAGNQNGDVATDQYHRYKEDVNLMKSLNFDAYRFSISWSRIFPDGEGRVNQEGVAYYNNLINYLLQKGITPYVNLYHYDLPLALEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFNEPRIVALLGYDQGTNPPKRCTKCAAGGNSATEPYIVAHNFLLSHAAAVARYRTKYQAAQQGKVGIVLDFNWYEALSNSTEDQAAAQRARDFHIGWYLDPLINGHYPQIMQDLVKDRLPKFTPEQARLVKGSADYIGINQYTASYMKGQQLMQQTPTSYSADWQVTYVFAKNGKPIGPQANSNWLYIVPWGMYGCVNYIKQKYGNPTVVITENGMDQPANLSRDQYLRDTTRVHFYRSYLTQLKKAIDEGANVAGYFAWSLLDNFEWLSGYTSKFGIVYVDFNTLERHPKASAYWFRDMLKH |
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| Function | Beta-glucosidase 7 [UniProtKB/Swiss-Prot:Q75I93] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os03g49600 | LOC_Os03g49600.1 | Chr03 | 28240285 | 28245347 | - | MSU_osa1r7 | ||
| CDS seq | ATGGCTGCACGGCGAGCGAACTGCGCGCTGGTGCTGGTGCTGGCGCTCGCGCTGTTGGCGGCGCGGGATGCTGGTGCCGCGGCGGTGCCCAAGCCCAACTGGCTGGGCGGGCTGAGCCGCGCCGCGTTCCCCAAGCGGTTCGTGTTCGGGACGGCCACGTCCGCGTACCAGGTCGAGGGCATGGCGGCGTCCGGCGGCCGCGGGCCGTCCATCTGGGACGCCTTCGCGCACACCCCGGGAAATGTTGCAGGAAATCAGAATGGAGATGTTGCGACAGATCAATATCATCGCTATAAGGAAGATGTTAATCTCATGAAAAGTTTGAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAGATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTATAAACTACCTTCTGCAGAAAGGTATCACTCCTTATGTCAATCTTTACCACTACGATCTCCCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGCGGATCTATTCACGGAGTACGCGGACTTCTGTTTCAAGACCTTTGGCAATCGTGTCAAGCACTGGTTTACATTTAATGAGCCAAGGATAGTAGCACTTCTTGGTTATGACCAAGGAACAAATCCTCCTAAAAGGTGCACAAAATGCGCTGCTGGTGGGAACTCAGCAACAGAACCATACATTGTTGCTCATAATTTTCTCTTATCACATGCTGCAGCTGTTGCAAGATACCGGACTAAGTATCAGGCAGCTCAGCAAGGCAAAGTTGGAATAGTTCTGGACTTCAATTGGTATGAAGCTCTTTCCAACTCAACTGAAGACCAAGCAGCGGCTCAAAGAGCCAGGGACTTCCACATTGGTTGGTATCTTGATCCATTGATAAATGGACATTACCCGCAGATAATGCAAGATCTTGTGAAAGATAGGCTGCCCAAGTTCACTCCTGAACAAGCTAGATTGGTCAAGGGCTCGGCTGACTATATTGGCATCAACCAATACACAGCTAGCTACATGAAGGGCCAGCAATTGATGCAGCAGACACCGACGAGTTACTCAGCCGATTGGCAGGTTACCTATGTTTTTGCGAAAAACGGCAAACCAATTGGACCACAGGCAAATTCTAATTGGCTTTACATCGTGCCATGGGGGATGTACGGATGTGTGAACTACATCAAGCAGAAGTACGGGAATCCGACAGTCGTCATAACTGAAAACGGAATGGATCAACCTGCGAACCTCAGCCGCGACCAGTACTTGCGCGACACCACGAGGGTTCATTTCTACAGGAGCTACCTCACCCAGCTGAAGAAGGCCATCGACGAGGGCGCCAATGTGGCTGGCTACTTCGCCTGGTCTCTCCTGGACAACTTCGAGTGGCTGTCAGGTTACACGTCCAAGTTTGGTATCGTCTACGTCGACTTCAACACGCTCGAGCGCCACCCCAAGGCGTCGGCCTACTGGTTCAGGGACATGCTAAAGCACTGA
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| Protein seq | MAARRANCALVLVLALALLAARDAGAAAVPKPNWLGGLSRAAFPKRFVFGTATSAYQVEGMAASGGRGPSIWDAFAHTPGNVAGNQNGDVATDQYHRYKEDVNLMKSLNFDAYRFSISWSRIFPDGEGRVNQEGVAYYNNLINYLLQKGITPYVNLYHYDLPLALEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFNEPRIVALLGYDQGTNPPKRCTKCAAGGNSATEPYIVAHNFLLSHAAAVARYRTKYQAAQQGKVGIVLDFNWYEALSNSTEDQAAAQRARDFHIGWYLDPLINGHYPQIMQDLVKDRLPKFTPEQARLVKGSADYIGINQYTASYMKGQQLMQQTPTSYSADWQVTYVFAKNGKPIGPQANSNWLYIVPWGMYGCVNYIKQKYGNPTVVITENGMDQPANLSRDQYLRDTTRVHFYRSYLTQLKKAIDEGANVAGYFAWSLLDNFEWLSGYTSKFGIVYVDFNTLERHPKASAYWFRDMLKH
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os03g49600 | LOC_Os03g49600.2 | Chr03 | 28240285 | 28245347 | - | MSU_osa1r7 | ||
| CDS seq | ATGAAAAGTTTGAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAGATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTATAAACTACCTTCTGCAGAAAGGTATCACTCCTTATGTCAATCTTTACCACTACGATCTCCCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGCGGATCTATTCACGGAGTACGCGGACTTCTGTTTCAAGACCTTTGGCAATCGTGTCAAGCACTGGTTTACATTTAATGAGCCAAGGATAGTAGCACTTCTTGGTTATGACCAAGGAACAAATCCTCCTAAAAGGTGCACAAAATGCGCTGCTGGTGGGAACTCAGCAACAGAACCATACATTGTTGCTCATAATTTTCTCTTATCACATGCTGCAGCTGTTGCAAGATACCGGACTAAGTATCAGGCAGCTCAGCAAGGCAAAGTTGGAATAGTTCTGGACTTCAATTGGTATGAAGCTCTTTCCAACTCAACTGAAGACCAAGCAGCGGCTCAAAGAGCCAGGGACTTCCACATTGGTTGGTATCTTGATCCATTGATAAATGGACATTACCCGCAGATAATGCAAGATCTTGTGAAAGATAGGCTGCCCAAGTTCACTCCTGAACAAGCTAGATTGGTCAAGGGCTCGGCTGACTATATTGGCATCAACCAATACACAGCTAGCTACATGAAGGGCCAGCAATTGATGCAGCAGACACCGACGAGTTACTCAGCCGATTGGCAGGTTACCTATGTTTTTGCGAAAAACGGCAAACCAATTGGACCACAGGCAAATTCTAATTGGCTTTACATCGTGCCATGGGGGATGTACGGATGTGTGAACTACATCAAGCAGAAGTACGGGAATCCGACAGTCGTCATAACTGAAAACGGAATGGATCAACCTGCGAACCTCAGCCGCGACCAGTACTTGCGCGACACCACGAGGGTTCATTTCTACAGGAGCTACCTCACCCAGCTGAAGAAGGCCATCGACGAGGGCGCCAATGTGGCTGGCTACTTCGCCTGGTCTCTCCTGGACAACTTCGAGTGGCTGTCAGGTTACACGTCCAAGTTTGGTATCGTCTACGTCGACTTCAACACGCTCGAGCGCCACCCCAAGGCGTCGGCCTACTGGTTCAGGGACATGCTAAAGCACTGA
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| Protein seq | MKSLNFDAYRFSISWSRIFPDGEGRVNQEGVAYYNNLINYLLQKGITPYVNLYHYDLPLALEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFNEPRIVALLGYDQGTNPPKRCTKCAAGGNSATEPYIVAHNFLLSHAAAVARYRTKYQAAQQGKVGIVLDFNWYEALSNSTEDQAAAQRARDFHIGWYLDPLINGHYPQIMQDLVKDRLPKFTPEQARLVKGSADYIGINQYTASYMKGQQLMQQTPTSYSADWQVTYVFAKNGKPIGPQANSNWLYIVPWGMYGCVNYIKQKYGNPTVVITENGMDQPANLSRDQYLRDTTRVHFYRSYLTQLKKAIDEGANVAGYFAWSLLDNFEWLSGYTSKFGIVYVDFNTLERHPKASAYWFRDMLKH
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os03g49600 | LOC_Os03g49600.3 | Chr03 | 28240290 | 28245347 | - | MSU_osa1r7 | ||
| CDS seq | ATGGCTGCACGGCGAGCGAACTGCGCGCTGGTGCTGGTGCTGGCGCTCGCGCTGTTGGCGGCGCGGGATGCTGGTGCCGCGGCGGTGCCCAAGCCCAACTGGCTGGGCGGGCTGAGCCGCGCCGCGTTCCCCAAGCGGTTCGTGTTCGGGACGGCCACGTCCGCGTACCAGGTCGAGGGCATGGCGGCGTCCGGCGGCCGCGGGCCGTCCATCTGGGACGCCTTCGCGCACACCCCGGGAAATGTTGCAGGAAATCAGAATGGAGATGTTGCGACAGATCAATATCATCGCTATAAGGAAGATGTTAATCTCATGAAAAGTTTGAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAGATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTATAAACTACCTTCTGCAGAAAGGTATCACTCCTTATGTCAATCTTTACCACTACGATCTCCCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGCGGATCTATTCACGGAGTACGCGGACTTCTGTTTCAAGACCTTTGGCAATCGTGTCAAGCACTGGTTTACATTTAATGAGCCAAGGATAGTAGCACTTCTTGGTTATGACCAAGGAACAAATCCTCCTAAAAGGTGCACAAAATGCGCTGCTGGTGGGAACTCAGCAACAGAACCATACATTGTTGCTCATAATTTTCTCTTATCACATGCTGCAGCTGTTGCAAGATACCGGACTAAGTATCAGGCAGCTCAGCAAGGCAAAGTTGGAATAGTTCTGGACTTCAATTGGTATGAAGCTCTTTCCAACTCAACTGAAGACCAAGCAGCGGCTCAAAGAGCCAGGGACTTCCACATTGGTTGGTATCTTGATCCATTGATAAATGGACATTACCCGCAGATAATGCAAGATCTTGTGAAAGATAGGCTGCCCAAGTTCACTCCTGAACAAGCTAGATTGGTCAAGGGCTCGGCTGACTATATTGGCATCAACCAATACACAGCTAGCTACATGAAGGGCCAGCAATTGATGCAGCAGACACCGACGAGTTACTCAGCCGATTGGCAGTTGCGAAAAACGGCAAACCAATTGGACCACAGGCAAATTCTAATTGGCTTTACATCGTGCCATGGGGGATGTACGGATGTGTGA
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| Protein seq | MAARRANCALVLVLALALLAARDAGAAAVPKPNWLGGLSRAAFPKRFVFGTATSAYQVEGMAASGGRGPSIWDAFAHTPGNVAGNQNGDVATDQYHRYKEDVNLMKSLNFDAYRFSISWSRIFPDGEGRVNQEGVAYYNNLINYLLQKGITPYVNLYHYDLPLALEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFNEPRIVALLGYDQGTNPPKRCTKCAAGGNSATEPYIVAHNFLLSHAAAVARYRTKYQAAQQGKVGIVLDFNWYEALSNSTEDQAAAQRARDFHIGWYLDPLINGHYPQIMQDLVKDRLPKFTPEQARLVKGSADYIGINQYTASYMKGQQLMQQTPTSYSADWQLRKTANQLDHRQILIGFTSCHGGCTDV
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os03g49600 | LOC_Os03g49600.4 | Chr03 | 28240285 | 28245347 | - | MSU_osa1r7 | ||
| CDS seq | ATGGCTGCACGGCGAGCGAACTGCGCGCTGGTGCTGGTGCTGGCGCTCGCGCTGTTGGCGGCGCGGGATGCTGGTGCCGCGGCGGTGCCCAAGCCCAACTGGCTGGGCGGGCTGAGCCGCGCCGCGTTCCCCAAGCGGTTCGTGTTCGGGACGGCCACGTCCGCGTACCAGGTCGAGGGCATGGCGGCGTCCGGCGGCCGCGGGCCGTCCATCTGGGACGCCTTCGCGCACACCCCGGGAAATGTTGCAGGAAATCAGAATGGAGATGTTGCGACAGATCAATATCATCGCTATAAGGAAGATGTTAATCTCATGAAAAGTTTGAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAGATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTATAAACTACCTTCTGCAGAAAGGTATCACTCCTTATGTCAATCTTTACCACTACGATCTCCCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGCGGATCTATTCACGGAGTACGCGGACTTCTGTTTCAAGACCTTTGGCAATCGTGTCAAGCACTGGTTTACATTTAATGAGCCAAGGATAGTAGCACTTCTTGGTTATGACCAAGGAACAAATCCTCCTAAAAGGTGCACAAAATGCGCTGCTGGTGGGAACTCAGCAACAGAACCATACATTGTTGCTCATAATTTTCTCTTATCACATGCTGCAGCTGTTGCAAGATACCGGACTAAGTATCAGGCAGCTCAGCAAGGCAAAGTTGGAATAGTTCTGGACTTCAATTGGTATGAAGCTCTTTCCAACTCAACTGAAGACCAAGCAGCGGCTCAAAGAGCCAGGGACTTCCACATTGGTTGGTATCTTGATCCATTGATAAATGGACATTACCCGCAGATAATGCAAGATCTTGTGAAAGATAGGCTGCCCAAGTTCACTCCTGAACAAGCTAGATTGGTCAAGGGCTCGGCTGACTATATTGGCATCAACCAATACACAGCTAGCTACATGAAGGGCCAGCAATTGATGCAGCAGACACCGACGAGTTACTCAGCCGATTGGCAGGTTACCTATGTTTGTGAGTTCCTTGCCTCGCCTCGCCTTGCGCTTGTACATCAGTATCGTTGCTAG
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| Protein seq | MAARRANCALVLVLALALLAARDAGAAAVPKPNWLGGLSRAAFPKRFVFGTATSAYQVEGMAASGGRGPSIWDAFAHTPGNVAGNQNGDVATDQYHRYKEDVNLMKSLNFDAYRFSISWSRIFPDGEGRVNQEGVAYYNNLINYLLQKGITPYVNLYHYDLPLALEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFNEPRIVALLGYDQGTNPPKRCTKCAAGGNSATEPYIVAHNFLLSHAAAVARYRTKYQAAQQGKVGIVLDFNWYEALSNSTEDQAAAQRARDFHIGWYLDPLINGHYPQIMQDLVKDRLPKFTPEQARLVKGSADYIGINQYTASYMKGQQLMQQTPTSYSADWQVTYVCEFLASPRLALVHQYRC
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os03g49600 | LOC_Os03g49600.5 | Chr03 | 28240285 | 28245347 | - | MSU_osa1r7 | ||
| CDS seq | ATGGCTGCACGGCGAGCGAACTGCGCGCTGGTGCTGGTGCTGGCGCTCGCGCTGTTGGCGGCGCGGGATGCTGGTGCCGCGGCGGTGCCCAAGCCCAACTGGCTGGGCGGGCTGAGCCGCGCCGCGTTCCCCAAGCGGTTCGTGTTCGGGACGGCCACGTCCGCGTACCAGGTCGAGGGCATGGCGGCGTCCGGCGGCCGCGGGCCGTCCATCTGGGACGCCTTCGCGCACACCCCGGGAAATGTTGCAGGAAATCAGAATGGAGATGTTGCGACAGATCAATATCATCGCTATAAGGAAGATGTTAATCTCATGAAAAGTTTGAATTTTGATGCCTACCGGTTTTCAATCTCATGGTCCAGGATCTTCCCAGATGGTGAGGGACGAGTTAACCAAGAAGGCGTAGCATATTACAACAATCTTATAAACTACCTTCTGCAGAAAGGTATCACTCCTTATGTCAATCTTTACCACTACGATCTCCCTCTTGCGCTTGAGAAGAAGTACGGAGGCTGGTTGAATGCAAAAATGGCGGATCTATTCACGGAGTACGCGGACTTCTGTTTCAAGACCTTTGGCAATCGTGTCAAGCACTGGTTTACATTTAATGAGCCAAGGATAGTAGCACTTCTTGGTTATGACCAAGGAACAAATCCTCCTAAAAGGTGCACAAAATGCGCTGCTGGTGGGAACTCAGCAACAGAACCATACATTGTTGCTCATAATTTTCTCTTATCACATGCTGCAGCTGTTGCAAGATACCGGACTAAGTATCAGGCAGCTCAGCAAGGCAAAGTTGGAATAGTTCTGGACTTCAATTGGTATGAAGCTCTTTCCAACTCAACTGAAGACCAAGCAGCGGCTCAAAGAGCCAGGGACTTCCACATTGGTTGGTAA
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| Protein seq | MAARRANCALVLVLALALLAARDAGAAAVPKPNWLGGLSRAAFPKRFVFGTATSAYQVEGMAASGGRGPSIWDAFAHTPGNVAGNQNGDVATDQYHRYKEDVNLMKSLNFDAYRFSISWSRIFPDGEGRVNQEGVAYYNNLINYLLQKGITPYVNLYHYDLPLALEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFNEPRIVALLGYDQGTNPPKRCTKCAAGGNSATEPYIVAHNFLLSHAAAVARYRTKYQAAQQGKVGIVLDFNWYEALSNSTEDQAAAQRARDFHIGW
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.415562 | 1.084612 | 12.101216 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_03g0703000 | RBH | 0.646620 | 1.879434 | 60.126854 |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | Os03g0703000 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_03g0031500 | RBH | 0.178405 | 176.280350 | 57.349197 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0031200 | RBH | 0.099778 | 24.858294 | 6.786106 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0031290 | RBH | 0.499112 | 252.896347 | 94.535400 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0031380 | RBH | 0.071304 | 7.378572 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0031080 | SBH | 0.789172 | 143.687271 | 13.715699 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_03G0487200 | RBH | 49.808029 | 27.6360655 | 141.5352935 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_03g0030750 | SBH | 0.142716 | 16.070921 | 8.421356 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0487000 | RBH | 98.849983 | 7.304131 | 495.473541 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0031140 | SBH | 0.238984 | 2.430101 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0031190 | SBH | 0.390635 | 32.804691 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0031150 | RBH | 1.130751 | 254.309555 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0030910 | SBH | 0.386546 | 15.260863 | 9.301729 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0030940 | SBH | 0.067166 | 113.449089 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G030930 | RBH | 0.050398 | 48.748253 | 18.067322 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0030810 | RBH | 0.000000 | 120.757004 | 38.476616 |
