Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os03g42840 | OGI:03069080 | 16/16 | Nipponbare | IRGSP 1.0 | MSU | Chr03:23888729-23895481 | ||||||||
| Gene Symbol | CBL3, OsCBL3 | ||||||||||
| DNA seq | GAACAACGGAAAACACACACAAAAAGGGGAAGAAAATCACGCAAAGAAAGGGAAAAAAAATAACTCGAAGAGTCCGTTTTTTCTTCCTCCTACTCGCCCCAATCCAATCCACTCCACCGTACCACTCGCCGCCGCCGCCGCCGCCGACGACGAAGCCGGCGCCGCCGCCGGAGCCGATCCCCCGCGGGCCCACCCTCCTACTTCGCGCTTCCTCGGCCGAAATCCCTACCGGGTCGAATCGCCCCGCGGCGCGCCGCTGATCCGCGCCGCCGCGCCCTAGCCATCCCGGGGACGGGCGGCGGCTGCTGCTGCTGCTGCCGATGCATGGTTGGTGGTGGCGGGTAGGTGAGTAAGAGAGTAGGCGTACCATGTTGCAGTGTCTGGAGGGGGTGAAGCAGCTCTGCGGCGTGCTACTCAAGTGCTGCGACCTCGACCTCAAGCAGCCCAAGGGGCTCGAGGATCCCGAAATCCTCGCCAGGGAGACCGTCTGTACGTCCTCTCTCTCTCTCTCGCTTGCTCGTGCAGTGTACTTGAGTGTCGATTGTTTCACTTGAACTGAAATTAATTGTGTTCCCTTTTTGTTTCGCGGCGCATGTGGCATTGGGGGTGGTGGTCTGCTCGTTTGTGCGTGCAGTTAGTGTGAGCGAGGTTGAGGCGTTGTATGAGCTGTTCAAGAAGATCAGCAGCGCGGTGATCGATGACGGACTGATCAACAAGGTCAGTGGGCTAATAATGCCCATCTGTTCAACTGAAAAAGGATGTCGTTTGTTATGATGATTTCATGATTCTTATGTTATATGGCCCTCTGGGGGTTGTGATCATTTTGGGTTGGTATGGTGCAGGAGGAGTTTCAGTTGGCGCTGTTCAAGACCAACAAGAAGGAGAGTTTATTTGCTGACCGTGTAAGACCAACAATAATATAACTTGCCTACCATGGAAAATATCCTGTAACTGTCTACATTTGAAGTGAAATCAATTATGAAATTAGTTTGGTTATGCTCTGTAGCATCTTGATGATGCTATACATTGTCCAAACAATCAATAGAGAATGATGTTGCTGCATAATTTGCTTTCTGCTAACATCAGTCAAACAGAGAATGATGTTGCCACATAATTTGCTTTCTGCTAACAACGAGTGCATTTCTTTCCCTGTCTTGCAGGTATTTGATTTGTTCGATACAAAACACAATGGTATTTTAGGATTCGAAGAATTTGCCCGTGCGCTCTCAGTATTTCATCCAAATGCACCTCTCGACGAGAAAATTGACTGTAAGTGTAAATGCATCTGGGTGGGTAGCTTAACTACAAAATATAGCGCCTTACTGATAGGGAAGTCTATAACCTAAAAATAGAAAAGGACACATCTATGGTTGAAAATAGATAATGATCACTTAACATAATGCAACATGCTCATATGTGACAAATGCTACTACCTATTATGTACTTTGCAAGTTTCCTTAAAACCGCAATGCATAGATTCAGCTTGCTCTAATTGCATAAATAGTAACTGTTCATACTAAGGAACAAATTAAAGGCTAGAAAGGCACAGTTTAACTACAAATAAGAACACTCATGCTTTTTTCTTTTTTTCTTTTTGGTCTAGTCTCCTTTGTGCTGGATGTATTAATTGTTTGGCTACTGACAGTGGCTGACAAAATTTCACAATTAGACAAATGGGAAAGTACTACATGGTGCTACAGTTAATTCACATTATGCAAACATGTACTGTAGCATCTTAGCATTAACCGAAAAGAAGCTCATAGTTATATATTGTGCAATGTAAACTATAGCATGTGAGATATCCTACCATTTTGTCTATCTGATTTCTGTTTAAATCATGTAATTTTTAACCATTACCGCTTGTCATGTATAATATACACGCCTTCATACCATGTGGAGCCAGCAAACTATATTTAATGTTTAAGTTAGCCCTCTTATTTACTTGATCCTCTGACATGTATTATGCAATTCATTTTTGTGCCATCTCAATGGATATAAGACTAAAATGCAACAAAACAAACAGTTCACAATATCCCTGAGATCAGACTTAACACCTGTATTTTATTTACCCTTTTTGGGTTATTTTGTGCTGATCCGAGAGTGGTCTTTATTGGAAGAAATGTTAACTAGGGGTGTTAATCTCTCTGCTTGGTTGATAATGCATCGCTATGCATTGAAATAAACCGGTTGCATGTTTTATTAGCATATGTTATGCCCTTTTTTTTTCTGTGTCTCTTGCTTTTATCTTCAATGTTGTGTGTGAAAAGAAATTCTTGCATTAACTCAATAATCCTTGCAGTTTCTTTCCAGCTATATGACCTCAAGCAACAAGGGTTCATTGAAAGACAAGAGGTACTTCTCTAATCAGCATGTTATGTTTCTCTCATAAAAGTCAGCATGTAGTATGTGTGAAGGTAACTTTACAATTAGAGTAAATTTCATATTGGACCATCGTTTTTTACCCATGTTGCAACTTGGACCAGGGCTAAACTACTTTGGCCTAGTACTCTTACAAAATATTTCACCTTAGGCCCTGTTCTTCTTCAACTCTCCTTCCTCTCTTCTTCCTCTCTTTCCTCTCATAGAGCCATGTGTGCCATGGCCCATGGCAGATCTAATCAGCACTGCTATGACCTGGGCATACAGATCAAAGCTCAAGCTCCATCCACAAGCCATCCCTGTGCTCTCGCTAGTTCTTCTCTGATGGAAAAAAAAAGAGGAAGTGAAAGGTCACTGTGTGCTGCTCGCTTCCTGGCAAGGTGCCTCAAATTTCCTGCACGCAGTGCCTCTACTCACTGGCTATTGGGGCTGCCATCTTCCATGGAAAGAGAGGGATCCCATTGGTGTTGGTAGAGCTCTCACCAGCCTCAACCAAGATGCTGTGCGCTCAAGCTTGAGCACCGGCCGCACGGCCTCTATGGGTGTTAATCTGGCACTCGAGCTCAAATCCATTCTTTGTTGGTGAGCCCAAGATCCTCGAGCTCCTCTGCCTTTGGCTGCGTCGCTGACTTGCTGGCATGGGAGGCTCACCATCGTGGGTGAGTTGACGGAGAATAAGACTGGCGGTGAATTAGGATCGGAGAGGACTGGGGTATCGGTCACTGCCATGCGGGCTAACTAGTCCAAGGTGCAAAGGTTGGTAAGAAAACCCAATCTTAATTGAAAACATCTTCAATTGCATAGTCCAATATGCAATTTAGGTAATAAAAATTAGTCCAAAGTTCAATTCACTCTTTTAATTATGATCGTACCATTTAAAAGTCCCGCTATTGGCTAGTATGCTGGAAAACCAACCAGATGCCAGCTCATTTTCTTCTGCAAGACCTCCCCTCTTCTCCCTTTGCATTTTTTTTACATTTTTTATGGGTGCTTTCATTGTCTTCTCTATTCACTAATGATCATGTATTATGAAAAATGCTATGGAACTAACCCAATTCAAGGCTACTTGTGGCCATATGCCTCCTTGTGGTTACCCTAGCACCACTTTCTTGAGCAGCGAATAGCATAGTTCAAAGTTTGTGTTCAGTGTAATTGATATATGTGTAAAATATTTGTGTCATAACTCAGAATACCATTTGCCTTCTGCAGATAATGCAACTGATCTTCTATCTTTTTTATGTTATACTTAATTGTTTCCTTTTTTGCCTATTAGGTTAAGCAAATGGTTGTTGCAACACTTGCTGAGTCGGGAATGAATCTTTCGGATGAAGTCATAGAGAGCATCATTGATAAGGTAAACATGAGTTGTTTACTTCAACGTATCAATCTGGGGATAGTTTTTTCATGATCATTTAATCAATCATGATGAGCATCATTTTCCCTTTTTATGCTCTCGATATGCTGATGCAAGTACCACACTTGTTTCAACTTATGAACTTATACTCTGAACATGTTTGTCTCTACAATGTGTGCTTGCAAATGGATATTGCTTTAGCTAGTGGCACTCCTAGTGTCATTTATGTTGTGTTTTGCAAATCATAGTTAAGTCTTACTGCCAAAGCTTTGTATTGACATCTTTTGCAGAAATATGATATATTTATAGCAGTGTTGAGCAATCTTACTAAGTTGCCACAAACACAAAAATTGTCTGCCTGATAACACAATTTATATTTGGACCTACAATTGTGATGCTACATCAGTACTCCTAAATGGAAATATAGTTATATGCACATATGATTGCAGCGGCTGTAGTATGTATATCTTATTAATTTACATCATTATTAGACTCATCGTGTTTTTTTGAAGAAGAAAATCTAGCCATACCAAAATAAGAATTATCAATTCTTTTATTTTCGTTCGTAACTAATGAGATGATTTACAGTTACTTTTTTAGTCTTAGTCTTAGTACGACTCCTTTCAAGTTTTGCATTTATATTTTGTCACATTTTTCTTTTGTGAGGCACAATGGTTAAACTATCCATAAATGTAATATTTTCTGTTAACCTTCTGGTTTCTGGTAACTGGGCATTTATTTGATCAATCATACAAAGTGATATTTTCATTGTTTTGCCAAATCCAGCGTGGATCAGGCCAGCCCACTGGCCACGCTATACAGGCTTTGTTGCTAATTGCTACCTTTGTACATTTTACAAACTGACTAGTTGCTGTGATTGTTTATATTATTCTGGCTGTTTATATTATTATGTTTATATTGCACATTTTACAAGACATTTGAGGAGGCCGACACAAAACATGATGGGAAAATTGATAAAGAAGAATGGCGCAATCTAGTTCTCAGACATCCTTCTTTACTGAAAAACATGACACTCCAATATCTCAAGTAAGATATGTTAAACTTGTCTGTGTATTTCTCTATTTGCAACTGATGATCATTTACGTTTCTCCCATCTGGAGCTATATCATAGGACACTATTGCATTTTGAGTTATGGCAAGAAGATTAAAATCTGTATGGCTCACAGGTTGCTCTTGAGCGAAGGATACTAGAGACTATTTGCGAATATTATTCCTAAATTACTAGTACAGTATCTTAGTTGTAAACAGAATATGAAACAGCATGGATTATCTAGATGATATTTGAATACAGTGAAAATAGTATGCTATCCCAGAGCATTGGTTTTTAAGTTCTTATTAGTGGTTCAGATTCAACGAAGCCAGTTTGTGGTCAGCCCCTGATTCAAAAGGATATATTAAAGCATCTGTTGTCGGTATTTCAGAATTTGTCTTCCTGTGGAGGGACGCAAAATATAATTTTACACGTACAGTATTAAATACCACAAAACTGTACATATTCTGGACAAACTAATGTTTTTATTTCACAAAATTACACATAATTTGGTAGGACATTTTGTGAAACTACGTATTTGGTGATTTTATTAAATATGATAGAATCTAAATGCGGAACCACCTATCAGACAACATATGTGTAATTATGGTCATGGTGTAGTTTTCTGATAATGTTACATGTGTATGTATAATGTATTTCTCCAAAGTTTACTCCTGCGTATGTGCTATGCATGCATTTTTAGACTCTTAACTTGTTATTAAAAGATGTGGACAGGGTTGTTTCACAACAAGTAGCCAGGGCTTAATATATGATGTTAAAATCTTCAGTTGTACATAAAATAGAGAAATTGTTCTACCTAGAAACTTACCTATTTTTTTTGACTTGTGCTTTGGTAGGGATTTCCCTTCTTCGTTTCTCTGATTGTAGTTTAACTTCAATTGCTATATTGTCAACTTCGGTTACAAACTTTTTTGAATTTTCGTTTTCATTTTTGTGCAGAAAATTTAAATTTAGATAATTCCACAAAGTGATTGTTAATTTTGGTTGTTTGTGTTGCTAAATATAACTTGAGAACTTCTCAGTTTTATGATATGTTTTAAATTAATACTACTAATTGCTTTTTACCACATTTCAGAAAACACATATTTTGTTAAACCTATCAAAAACTGTACTCTTTCCAAAATCACACATGTTTCTCACTGAGGGGTAGGTCTCAGCACACCATCCACACATCTAGGTGGATTTCACATGTTATGTTTGTTGGCGTTTACCATGAATCAACAAATATTTAGTTTACTTAAATGTTTTGCAATTAATTCTTTGAAACACAGACTGAAATAAGTATTCTGATAGCTAATGTCAAATAGGTGTATTTTTGTGATGATTTAGTCTGGATACTTTTTTTCTTCCTATTTTACTTCGATTGCTCTTTGGTTACTCCATTTCACAGACCTAAGTACCTAACCATATCAACTTTGGCAGGGACATCACAACTACATTTCCAAGCTTTGTCTTCCATTCTCAAGTCGACGATACTTGAAATCTGAGAATTTCCCCCTCCAATGGAATGCCAGAAGACAGTCTCGTTGCTTTTGAGGCTTTGCAATGAGTAGTTTTTGGTTCAGCACTTCATCTGAAGCCATAAAGTTCCAGAGATGATCACATATTGCAGTGGAGAAATCAAACATTTCCGTATTGTTAATAATAGTTCTTTTTCTTGCTTTTAGCCGGTGTGTGATATCTGTCTCAAGTTTCTTTTCCCTATTTTCTGTTTTTTTTTCTTTCTGTTGGTTTATTGGTTAGTAGTCGATCTAATTGTTTGAAGAAACCTCCGACCGTGTATAAAGCTTCCTTCTAGTGAACTGTATTTAAGTCAGGAAGTTTTCTATTGTATATTGCAGATTAATTGAATGGCTCAGGAATTCCCTAGTTGATTTTTAAGTGTTTTACCGTCTGAATAATAATATTTTACAATCAGATTTCGATATTGTATTTTTTTTGGTACTCA
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| CDS seq | ATGTTGCAGTGTCTGGAGGGGGTGAAGCAGCTCTGCGGCGTGCTACTCAAGTGCTGCGACCTCGACCTCAAGCAGCCCAAGGGGCTCGAGGATCCCGAAATCCTCGCCAGGGAGACCGTCTTTAGTGTGAGCGAGGTTGAGGCGTTGTATGAGCTGTTCAAGAAGATCAGCAGCGCGGTGATCGATGACGGACTGATCAACAAGGAGGAGTTTCAGTTGGCGCTGTTCAAGACCAACAAGAAGGAGAGTTTATTTGCTGACCGTGTATTTGATTTGTTCGATACAAAACACAATGGTATTTTAGGATTCGAAGAATTTGCCCGTGCGCTCTCAGTATTTCATCCAAATGCACCTCTCGACGAGAAAATTGACTTTTCTTTCCAGCTATATGACCTCAAGCAACAAGGGTTCATTGAAAGACAAGAGGTTAAGCAAATGGTTGTTGCAACACTTGCTGAGTCGGGAATGAATCTTTCGGATGAAGTCATAGAGAGCATCATTGATAAGACATTTGAGGAGGCCGACACAAAACATGATGGGAAAATTGATAAAGAAGAATGGCGCAATCTAGTTCTCAGACATCCTTCTTTACTGAAAAACATGACACTCCAATATCTCAAGGACATCACAACTACATTTCCAAGCTTTGTCTTCCATTCTCAAGTCGACGATACTTGA
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| Protein seq | MLQCLEGVKQLCGVLLKCCDLDLKQPKGLEDPEILARETVFSVSEVEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPLDEKIDFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLSDEVIESIIDKTFEEADTKHDGKIDKEEWRNLVLRHPSLLKNMTLQYLKDITTTFPSFVFHSQVDDT |
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| Function | Calcineurin B-like protein 3 [UniProtKB/Swiss-Prot:Q75LU8] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os03g42840 | LOC_Os03g42840.1 | Chr03 | 23888729 | 23895481 | + | MSU_osa1r7 | ||
| CDS seq | ATGTTGCAGTGTCTGGAGGGGGTGAAGCAGCTCTGCGGCGTGCTACTCAAGTGCTGCGACCTCGACCTCAAGCAGCCCAAGGGGCTCGAGGATCCCGAAATCCTCGCCAGGGAGACCGTCTTTAGTGTGAGCGAGGTTGAGGCGTTGTATGAGCTGTTCAAGAAGATCAGCAGCGCGGTGATCGATGACGGACTGATCAACAAGGAGGAGTTTCAGTTGGCGCTGTTCAAGACCAACAAGAAGGAGAGTTTATTTGCTGACCGTGTATTTGATTTGTTCGATACAAAACACAATGGTATTTTAGGATTCGAAGAATTTGCCCGTGCGCTCTCAGTATTTCATCCAAATGCACCTCTCGACGAGAAAATTGACTTTTCTTTCCAGCTATATGACCTCAAGCAACAAGGGTTCATTGAAAGACAAGAGGTTAAGCAAATGGTTGTTGCAACACTTGCTGAGTCGGGAATGAATCTTTCGGATGAAGTCATAGAGAGCATCATTGATAAGACATTTGAGGAGGCCGACACAAAACATGATGGGAAAATTGATAAAGAAGAATGGCGCAATCTAGTTCTCAGACATCCTTCTTTACTGAAAAACATGACACTCCAATATCTCAAGGACATCACAACTACATTTCCAAGCTTTGTCTTCCATTCTCAAGTCGACGATACTTGA
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| Protein seq | MLQCLEGVKQLCGVLLKCCDLDLKQPKGLEDPEILARETVFSVSEVEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPLDEKIDFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLSDEVIESIIDKTFEEADTKHDGKIDKEEWRNLVLRHPSLLKNMTLQYLKDITTTFPSFVFHSQVDDT
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 1.938719 | 2.695609 | 1.748796 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_03g0626800 | RBH | 2.909131 | 4.045825 | 7.206446 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os12g40510 | RBH | 0.344673 | 0.324317 | 1.214045 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os03g0626800 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_03g0026960 | RBH | 0.832219 | 21.321106 | 11.730396 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0026690 | RBH | 0.525780 | 4.615476 | 4.238182 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0026750 | RBH | 3.333179 | 30.301842 | 12.134425 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0026780 | RBH | 0.382331 | 0.427943 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0026550 | RBH | 9.457644 | 25.395725 | 25.925833 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_03G0421100 | RBH | 15.154568 | 31.2985735 | 71.710377 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_03g0026330 | RBH | 1.035663 | 1.761284 | 3.617313 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0425100 | RBH | 20.3849095 | 38.69433 | 28.597843 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0026580 | RBH | 0.457837 | 0.258745 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0026610 | RBH | 0.662885 | 15.900425 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0026710 | RBH | 5.666438 | 34.899887 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0026450 | RBH | 1.965808 | 1.789400 | 3.701935 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0026390 | RBH | 0.805845 | 10.325798 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G026390 | RBH | 1.022596 | 5.790263 | 3.918354 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0026340 | RBH | 2.882478 | 18.737434 | 23.875692 |
