Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os03g41200 | OGI:09005370 | 16/16 | Nipponbare | IRGSP 1.0 | MSU | Chr03:22911337-22918539 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | CAAACAAAATTGAAATCCACAAATTTTCCAATTCAAAGTCTCACATAATAGTAGATAATTGCATGAAGTCTTACACATAGCCCAAATTAACGGTGCACACACAATACAAAATGAGAGGGTACAAATAGTTCATAATAGTGAAATAACCAATCTTTCCATGAAGATGGTATCCTACATAGCACCGGGAAACTTCTCGCTGATGTACATAGCAACCCAATCAAGTTTGTTCGCAAATGGAAGACCGTTGAAAGCTCTAGCAATATGTGGATTAGCAACCAAATAGTGATAGTAGAAAGAGATGTGATGTTGCTCAAAACCTGGAAGGCTATTCAAGTTGTCCCATAGATCATCAGGTAGTTCATTCCCAACTGTGCTAGACCTTATTATGGCATTTGCTAGTTTGTCACTAGCTCTGTCAAATGCACCAACCAAACCATCATCGTCATGTGCATATGTCTTTTGTCTCTTGGGCTTGCTAGCCGATGATCTCTCATCATGATCTATTGTGGGAGCATCTTCATTCACTTCATTCTCTGTACCCTCGACATCTTCAGTGCCTAGAACTGAGCTTGAGTCCTTTGCAAAATTTCCTATAGCCATGGTACTACCAAATATGGTAAGCATCTCACCATAGTTGGTAATAGGCCTGTTGAAAAACTCAGCATCGCTCTTGTTGTTATGCTGTCATGATTGTGAGATGCATTAGAAACAAGTAATTGAAGCAATTGACAATCATATTGAAGTTGGTAAGGTATATACCTGCATATAGTCATTGTAGTGCTCCTCGTCAAGGCTAATAATGAAGTTCTCTTCGTCCCAAATAGCTCCACTCACCTTCCTAAGACGACTAATCTTTTGAAACTTCTTATGCCATGTCTTCAAATGATTTCTAATCTGATCCCCGGTGAGTGTTGTCGAAAACTTTTCATTCACAACTCTAGCACATGCATTGAGATGCACCTGCTTAAAACCAGCCGATGTCCTTGTGCCACTAGCCACCAGATTGGCCAAATTGGAGAGCATCAAAGATGACATGGATGATGTCCATGAGGCTACAACTCCCTTTCCGTTGTTGGTGTCCATATCCTAGCTGCCATAATAAATGAAAATGTGGATTAGCAACCATACACTAGCCGTCATTCAAAAGTAATAAATCAATACATATGTTGTCATTCAAGAGTAATACATTCAGTAGTAAAAAAATTCAGCACAGTGGTCATTCAAGAGTGATACATTCAAGAGTAAAAAAAAATCAGCACAGTGGTCATTCAAGAGTAATACATCAATACATATGTTCGTACAATTTAAATTCATCATACAAGTAGTCCATACAAATAGTACAACTACAAATAAATTTAGTCTTGACAATACATCCACACAAAGGAATGCAAACATGTTTTTGAAATGCTAAATAGTACAAGCACAATTTAGTTTCCATGGTGATTTTGACGATCGGCCCACATCTGATCTGCAAGTCCTTGCCTAAATTGAACCATCCATGCGTGGTCGTTTGGTTGGCCAACCGTAGAAGTATCGTTGTCTTGAATTATGGACTCATTTGGGCCCATCACAAGCTCATCAATATCATCATTTATCACCCAATTATGAATAATACAACAAGCTACAACAATGTTTACTTGAGTCTGAAAGGGGAAAAATGGTGTGGCATCATCAAGAATTTTGAACCTCCTCTTCAGTGACCCAAATGCACGTTCAACAGTGATACGAAGGGATGAGTGTCTAAGGTTGAACAACTCCTTCTCATTTTGGACCGGATTGTTTCCCCACTCATTTAGATGATACCGGGTGCTTCTAAAGGGTGGCAAAAATCCCGGTTTGGCTCCGTATCCAACATCAACTAGGTAGAATTTTCCTATAACGTGATTGGCAACTCATCATATTTCTACATATTAACAATTAGTAACCATAAAAATGATACACTAATTTAATCTATTACCTTGGGGGACATGAAGACCATTTTCACGTTCCAAAGCATCTCTTAAAACTACAACATCATGTGCAGCCCCCTCCCAACCAGCCAACACATATGTGAACCGAAGATCAAAATCTACTGCTGCCATTACATTTTGTGTAGCATGATTCTTCCTACCACGAAAAGACGACTCCATGTTCTTTGGGACAGATGCTCTAACATGTGTGCCATCAATAGCTCCAATACAATCCTAATTAATTTCAATGATGGGTAAGACAATATTTTTTAGGATGTACAATTTAGTAGCAAATGGACAAAAGAAGCGTCGATAAGTCTCACACCTTAATGTATGGATCCCATCTGTGGTTGCCTGCTATTTTAGGTGCGATGTCCAAAGATGGGGGCTTGATAAGATCATTTCATAACTCTCCAACCGCATGAAGTACCAAATTAAAATATCGACTAACTATTTCTCCTGACCTACGGAAAGTAGCACCAACTACCCTATTTCTAAGATTGTGTCCAATTGTATGTAAAAACATAGCAACTTGTTCCTCAACACACACGTTGATGGTATCTTCAAGCAAGCCACGATCTCTAAAAAGTTTACAAAATCGAAAGAAAGATGATTTTCTAAGTCTAAGCATGTTGATACAAGTTATATCATTTCTCCAAATGAGGTCATCGAGGTGTTCACTTATCTTTCTATCCCTTTCAACTAATGGGCCATATGTTATTCCTACTCTCCTTGGCACTCTCCTATTTCTAGACTCAATAATAAGGGCCATCATCGACACTAACATGTTTGCAGCAGCAGCAAAAATTAAAAGCCTGCTCCTTTGATCCATCTACAATACAAATGTTTGCAACGCATTTCACAATCCAGGTTTTCACTATGCAAATATATGAGTATGCAAACAATTCAACAAATAAATGGTTTTAACCTTGACAACACAGGAAGCGGTCCGTTGAAAAACAATCTCACTAGATCAGCCTCCTAACCTGCAAACAAACAACAAAAAAAAATCCCAAACAGTGAGCAAACAGGATCCCAAACAGCCAATAATTGTTAATTGAAACTCTACAGCACGCCGGCGGCCACTCCCCATGCCGGCGGCCACCTCCCCCCCTCCCGGTGTAACACCCTGAAAATTCGACCAACGAAAATCAAAACTCTAAAAATATGGGCCTTCAAAAAACTTTTTAAATAAATTGCATCATGCTGATTTTATTCGCTCATTTCATTGGAATTTGGTTTCGAAGTTTATAGATCGCGAATAAAGAACAATTGATTAGGAAGAAAACCTAAAATTAAATGAGCAAAATAAATAATTGAAATATAATTTGGAGTAAAGATTAGGTGAGGTTGGAAATAAATAAAATATTATCACAACCATATTAGTAACAATTGAATTCCAGTGCGACAGAATAAAAATTAGCCTAATTAGACATTCAAATAAATTATATAAATAAAATATGGGTAATATTAATCTTGGGTGAGTCCATTGGTTGGAATAACATAAAAATTGGGTAAACCTCATTTATGCAAAAATTTGGATTTATAGAATAGAATTTATATAGGAAATAGGCTAAAATTGGGATAAATAAGAAAATACATTGTTCATTGCACTCTAGGTGCTCGACGAGGTCCCTAGCCCTACCCCCTTCTCTGCCGAGCGTGTCTAGCCGCCCCGAGCCCCGTGCCACCGTCGCTGTCGCGTCCGTCATGTCGCTGCTGCCGCCAGTCGCGCGTCGCCACGCGCCGTCGCCGTCGCTGTCGCCATCGCCGTCGCGTCCTGTCGCGCCCCGTGCCGCCGCGCGCCGTCGCCGTCGCGTCCCGTCGTCGCTCTGAGCCGCGCGCCGCTGCTGCTGCGCCGTCGCCGTCGCCATCCCGCTGCCGCACCGCGCGTGCCGCCGTCGCCTCGAGCCCCGTCCCGCCGTCGTGTCGCCCGTTCCGTCGCCGCGCGCCTGTCCCCTCGCCGCCTCATCGCCCGTCGCCATCGCGCCGAGCCCCGTGCCAAGCCACGCCGCCCGCCCATCGCCATCGCCGCCTGCCGACTACCGCACCGCGCGCCACCCGTCACGTCGCCATGAGGGCCGGCCGCCCCCTCTCCCGCGCCCTATAAAACCCCGGCCCCTCCCGTTCTCCACTCCACACCCATTCCCCTTCCATCTTCTCCCCCCCTCTCCTCCTTCTCCACGCGCCGCCGCCGTCATGCCGCCGCGCCGCCGCTTTCGTGCCGCCGCGCCGTCACCTTGAAGCCGCCGCGCCGTGCATCGCCGCCTTGCGCCGCCACCGCTGCCCGTAAGCCGCTCCCCCCCCCCCCTGTCGCGTCCGGTCGCCATCGCCGCCCGGGTAGGCCGTGAGCCGAGAGAGAGAGGTGGGCAGAAGCCGAGAGAGAGAGAGAAAGAAAGAAGCCGGGAGGGAGAGAAAAGAAAGAAAAAGAAAGAAAGAAAAAGAAAGAAAGAAAAAGAAAAAGAAAAGGAAAATAAATAGGAATTTGAGGGAGATTAAGAAGTTTAGAAAAAAATTAAAATAATTAGAATTTAATTATAGATTAATTATAGTCGTAGAATTGAAAATTTTAATATAATTATAGATTATTTTTGGTAATCTCTATAAGTAATCAATTCGCGGTAGGAATTTAGATTTATTTAAGAGCTAAATAATTATGTTGAAATCTTAGGAATGTACTTATAAAACACAAAATATCTTAGGTTGAGTAAATTAAAATAGGATAGTCCTATTTCGCAAATAATGTAGTTGATGTAGAATTCGTCTCTCGCGCTCGCTTTTCGATTTGGTCTTTATTGGATTTTATTTGAATTCTAATGGAATTCAAATCAATTCTTCGCACGTACTTTTAGACCCCGAGGGAGTTGCGGATCCGAGCGAGGATCAAGACCCGCAGGACTACGAGCAAGGCAAGTCATCACTATTCCTTGAATATGTTGATCCCAATTGCGAAATTATTTTGTTTACAAATAAAATTGCATGCAATGATGAATATCCTACTTGTGATTATGCCATGCCTTGATTATTGTGTACCCCTATTCCTTCGTAACCATATTTACGTATGAGTCCCTAGTCAATTATGACAATTGCTTAGAAATGCTAATCTAGAATCATGCATACTGATATTTATCAAATGCTATATGCTTGGGCAATTACCTTTGGGAAGGTAATTGAGATGCGGCATGTGGAGACATGAGCGCCACATTGCCATGAAATTGATGACATGATTTGTGAAAGGAAAATAAAGTGAAAACAACTGTTTTCGACTGGGGCGGACGGAGGATTTGGGTGGTATCTGGAAAAGGCTAGTACCGTCCCCGGTCAATTAAGGACTGAGCCATAAAGTTAAGCATGAAACGACCCCCGTACAACCGCACTTCTCGTATGGGTATAGACCTAGCGGAGTAGATAGCCGAGCGGAGGCAGTATCCCTGCATAGATGGTTCACCCCTGAGTGAGGCAGGTGCGCTTCGGTGGGATAGCCATTGAGGTAGGGCCGAGAGGTGTGCCCTACATCGGTGTCGCCATTGGTAGGACTGCCATGAGTGTGTGATAGAGAGAACTTAACTTGAACCATAATTTAATATGTGTGTGAGACTTCTCTTTCTCGGGAGCGCCAGAACTCCTCTCATTGCTAGAAACATGGACGCCTAGAGTGCATGAGGAAGTAAGTTCATGGAGCGGGTACTGCCAATGCGAGGTTATCGAAAGGCTTTGCCATGACGCGTCTCATGTGTTGGGACGAGGCTCATGTGTTGGGCAGTCACGGAGTGCGGGTAAAGTGTACATCCACTGCACTGTGAGTAAACCAAATCTATTCGAATAGCCGTGCTCGCGGTTATTGAGCACCGGGACATGTATTACACTTGGCTAGACTCTAAATTCTTAACTTGTGTGGGATGGGTTATTGCATGATGATTTTTATGCTGTTGGAGCCACTTCCTGAGAGGCGGGAAGGTGGACGTCCTCAGAAAACCATGACGACTCAATGGCGGGAAGCTATCCTTGGGATCACAATGGATGGTGGACAGAACCGTCGTTGTTTAAATGTGAACACTGGTACTAAAGTTTGATCAGTCAATGCTAGGTCTTAGGCTAGTGAAAAGAATTACAAAACTTGCTTTGCGCAAAAGAACCATAGCCATCCTTTGAAATACCCCTATCATGTGCATTGTTGCTGTGGTGGCTTGCGGAGTACGGTTGGTACTCACCCTTGCAATATACAAACTTAATCAGAGGCCGGAGATGAAGCTTCGGAGGATCCCTACGCTTACTTCCAGGAGAGTGATGAAGACGATGACGCTCAGTAGGTCTTAGTTATGGTCGTTGCCTATGGCAATGGCGTGCTGCTGCCTTAACTCCGCTGCCTTATCTACTTCTGCTTTTGGAATGTATTCTGGACCGCACGGTCTGATGATCTAAGACTATGCCTGCGGGCTTATGATGTAATAATTCGTGCTAGACTCTCGTGTATGTGCATTTGGTATTTCAGCTATGAACTCGTGTGTACCAGACTACTTGATCCAGGGAAATGGTACTGTTTACACGATTGATCCCTGTTATAAAAACGGGGGTCCACACCCAGCGCGGCGACCTCCCCCCATCATGGCGTGGCGACCTCCCCCCCCCACGGCGCGGCGACTCCCCCCACCCCCACGGCGCGGCGGCTAGCGAGCTCGGCCACCTCACCCCCCACGACGCGACGACCTCCCCCCTCACGGCGCGGCGACAACCCACGCCGGTGGCGAGCTCGGCCACCTCCCCCCCCCCCCCCCCACGGCGCGGCGGCTTCTTCCCCCACCCCCACCCTGGGCCACTCCCCTGCAGCGGCGAGCTCGACCACCACCCGACACCGGTGAGCTTGTCCCCCCACCACCGGCCACTCCCCGCAGAGGCCACGAGCTCGTTTCCCCTGGCACGGCGACCCCAATCCCCTCCCGGCCACGGCGACCTCTTCAAACCCCGGATCCGTCCCCTCCAGCGGTGGCGGCGCCGCTCTCTTCACCCTCCCCGGCCCCGGCGGCATGCCATGCACAGAAAAAAGGGGAAGGGGGCGACACTAGCCAGAGGGAGGAGAGGAAGGGGAAGGGGAAGGGGACGTCGACCTTACCTCCAGATGCCCGGCGCCGTCTCTACCGACCGTCAGCTCGAGCGCCCGCGCCGCCGCTCGCAAACGAGAGAGAAAGCGAGAGAAAGGTGTGATCCCCTCACCCCCCTCTCCCTCTGTGCGTGCGATGCGCCAGCATCCGGGTTC
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| CDS seq | ATGGACACCAACAACGGAAAGGGAGTTGTAGCCTCATGGACATCATCCATGTCATCTTTGATGCTCTCCAATTTGGCCAATCTGGTGGCTAGTGGCACAAGGACATCGGCTGGTTTTAAGCAGGTGCATCTCAATGCATGTGCTAGAGTTGTGAATGAAAAGTTTTCGACAACACTCACCGGGGATCAGATTAGAAATCATTTGAAGACATGGCATAAGAAGTTTCAAAAGATTAGTCGTCTTAGGAAGGTGAGTGGAGCTATTTGGGACGAAGAGAACTTCATTATTAGCCTTGACGAGGAGCACTACAATGACTATATGCAGCATAACAACAAGAGCGATGCTGAGTTTTTCAACAGGCCTATTACCAACTATGGTGAGATGCTTACCATATTTGGTAGTACCATGGCTATAGGAAATTTTGCAAAGGACTCAAGCTCAGTTCTAGGCACTGAAGATGTCGAGGGTACAGAGAATGAAGTGAATGAAGATGCTCCCACAATAGATCATGATGAGAGATCATCGGCTAGCAAGCCCAAGAGACAAAAGACATATGCACATGACGATGATGGTTTGGTTGGTGCATTTGACAGAGCTAGTGACAAACTAGCAAATGCCATAATAAGGTCTAGCACAGTTGGGAATGAACTACCTGATGATCTATGGGACAACTTGAATAGCCTTCCAGGTTTTGAGCAACATCACATCTCTTTCTACTATCACTATTTGGTTGCTAATCCACATATTGCTAGAGCTTTCAACGGTCTTCCATTTGCGAACAAACTTGATTGGGTTGCTATGTACATCAGCGAGAAGTTTCCCGGTGCTATGTAG
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| Protein seq | MDTNNGKGVVASWTSSMSSLMLSNLANLVASGTRTSAGFKQVHLNACARVVNEKFSTTLTGDQIRNHLKTWHKKFQKISRLRKVSGAIWDEENFIISLDEEHYNDYMQHNNKSDAEFFNRPITNYGEMLTIFGSTMAIGNFAKDSSSVLGTEDVEGTENEVNEDAPTIDHDERSSASKPKRQKTYAHDDDGLVGAFDRASDKLANAIIRSSTVGNELPDDLWDNLNSLPGFEQHHISFYYHYLVANPHIARAFNGLPFANKLDWVAMYISEKFPGAM |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os03g41200 | LOC_Os03g41200.1 | Chr03 | 22911337 | 22918539 | - | MSU_osa1r7 | ||
| CDS seq | ATGGACACCAACAACGGAAAGGGAGTTGTAGCCTCATGGACATCATCCATGTCATCTTTGATGCTCTCCAATTTGGCCAATCTGGTGGCTAGTGGCACAAGGACATCGGCTGGTTTTAAGCAGGTGCATCTCAATGCATGTGCTAGAGTTGTGAATGAAAAGTTTTCGACAACACTCACCGGGGATCAGATTAGAAATCATTTGAAGACATGGCATAAGAAGTTTCAAAAGATTAGTCGTCTTAGGAAGGTGAGTGGAGCTATTTGGGACGAAGAGAACTTCATTATTAGCCTTGACGAGGAGCACTACAATGACTATATGCAGCATAACAACAAGAGCGATGCTGAGTTTTTCAACAGGCCTATTACCAACTATGGTGAGATGCTTACCATATTTGGTAGTACCATGGCTATAGGAAATTTTGCAAAGGACTCAAGCTCAGTTCTAGGCACTGAAGATGTCGAGGGTACAGAGAATGAAGTGAATGAAGATGCTCCCACAATAGATCATGATGAGAGATCATCGGCTAGCAAGCCCAAGAGACAAAAGACATATGCACATGACGATGATGGTTTGGTTGGTGCATTTGACAGAGCTAGTGACAAACTAGCAAATGCCATAATAAGGTCTAGCACAGTTGGGAATGAACTACCTGATGATCTATGGGACAACTTGAATAGCCTTCCAGGTTTTGAGCAACATCACATCTCTTTCTACTATCACTATTTGGTTGCTAATCCACATATTGCTAGAGCTTTCAACGGTCTTCCATTTGCGAACAAACTTGATTGGGTTGCTATGTACATCAGCGAGAAGTTTCCCGGTGCTATGTAG
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| Protein seq | MDTNNGKGVVASWTSSMSSLMLSNLANLVASGTRTSAGFKQVHLNACARVVNEKFSTTLTGDQIRNHLKTWHKKFQKISRLRKVSGAIWDEENFIISLDEEHYNDYMQHNNKSDAEFFNRPITNYGEMLTIFGSTMAIGNFAKDSSSVLGTEDVEGTENEVNEDAPTIDHDERSSASKPKRQKTYAHDDDGLVGAFDRASDKLANAIIRSSTVGNELPDDLWDNLNSLPGFEQHHISFYYHYLVANPHIARAFNGLPFANKLDWVAMYISEKFPGAM
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os03g41200 | LOC_Os03g41200.2 | Chr03 | 22911337 | 22918539 | - | MSU_osa1r7 | ||
| CDS seq | ATGGACACCAACAACGGAAAGGGAGTTGTAGCCTCATGGACATCATCCATGTCATCTTTGATGCTCTCCAATTTGGCCAATCTGGTGGCTAGTGGCACAAGGACATCGGCTGGTTTTAAGCAGGTGCATCTCAATGCATGTGCTAGAGTTGTGAATGAAAAGTTTTCGACAACACTCACCGGGGATCAGATTAGAAATCATTTGAAGACATGGCATAAGAAGTTTCAAAAGATTAGTCGTCTTAGGAAGGTGAGTGGAGCTATTTGGGACGAAGAGAACTTCATTATTAGCCTTGACGAGGAGCACTACAATGACTATATGCAGCATAACAACAAGAGCGATGCTGAGTTTTTCAACAGGCCTATTACCAACTATGGTGAGATGCTTACCATATTTGGTAGTACCATGGCTATAGGAAATTTTGCAAAGGACTCAAGCTCAGTTCTAGGCACTGAAGATGTCGAGGGTACAGAGAATGAAGTGAATGAAGATGCTCCCACAATAGATCATGATGAGAGATCATCGGCTAGCAAGCCCAAGAGACAAAAGACATATGCACATGACGATGATGGTTTGGTTGGTGCATTTGACAGAGCTAGTGACAAACTAGCAAATGCCATAATAAGGTCTAGCACAGTTGGGAATGAACTACCTGATGATCTATGGGACAACTTGAATAGCCTTCCAGGTTTTGAGCAACATCACATCTCTTTCTACTATCACTATTTGGTTGCTAATCCACATATTGCTAGAGCTTTCAACGGTCTTCCATTTGCGAACAAACTTGATTGGGTTGCTATGTACATCAGCGAGAAGTTTCCCGGTGCTATGTAG
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| Protein seq | MDTNNGKGVVASWTSSMSSLMLSNLANLVASGTRTSAGFKQVHLNACARVVNEKFSTTLTGDQIRNHLKTWHKKFQKISRLRKVSGAIWDEENFIISLDEEHYNDYMQHNNKSDAEFFNRPITNYGEMLTIFGSTMAIGNFAKDSSSVLGTEDVEGTENEVNEDAPTIDHDERSSASKPKRQKTYAHDDDGLVGAFDRASDKLANAIIRSSTVGNELPDDLWDNLNSLPGFEQHHISFYYHYLVANPHIARAFNGLPFANKLDWVAMYISEKFPGAM
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os03g41200 | LOC_Os03g41200.4 | Chr03 | 22912599 | 22918539 | - | MSU_osa1r7 | ||
| CDS seq | ATGGAGTCGTCTTTTCGTGGTAGGAAGAATCATGCTACACAAAATGTAATGGCAGCAGTAGATTTTGATCTTCGGTTCACATATGTGTTGGCTGGTTGGGAGGGGGCTGCACATGATGTTGTAGTTTTAAGAGATGCTTTGGAACGTGAAAATGGTCTTCATGTCCCCCAAGGAAAATTCTACCTAGTTGATGTTGGATACGGAGCCAAACCGGGATTTTTGCCACCCTTTAGAAGCACCCGGTATCATCTAAATGAGTGGGGAAACAATCCGGTCCAAAATGAGAAGGAGTTGTTCAACCTTAGACACTCATCCCTTCGTATCACTGTTGAACGTGCATTTGGGTCACTGAAGAGGAGGTTCAAAATTCTTGATGATGCCACACCATTTTTCCCCTTTCAGACTCAAGTAAACATTGTTGTAGCTTGTTGTATTATTCATAATTGGGTGATAAATGATGATATTGATGAGCTTGTGATGGGCCCAAATGAGTCCATAATTCAAGACAACGATACTTCTACGGTTGGCCAACCAAACGACCACGCATGGATGGTTCAATTTAGGCAAGGACTTGCAGATCAGATGTGGGCCGATCGTCAAAATCACCATGGAAACTAA
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| Protein seq | MESSFRGRKNHATQNVMAAVDFDLRFTYVLAGWEGAAHDVVVLRDALERENGLHVPQGKFYLVDVGYGAKPGFLPPFRSTRYHLNEWGNNPVQNEKELFNLRHSSLRITVERAFGSLKRRFKILDDATPFFPFQTQVNIVVACCIIHNWVINDDIDELVMGPNESIIQDNDTSTVGQPNDHAWMVQFRQGLADQMWADRQNHHGN
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os03g41200 | LOC_Os03g41200.5 | Chr03 | 22912599 | 22918539 | - | MSU_osa1r7 | ||
| CDS seq | ATGGAGTCGTCTTTTCGTGGTAGGAAGAATCATGCTACACAAAATGTAATGGCAGCAGTAGATTTTGATCTTCGGTTCACATATGTGTTGGCTGGTTGGGAGGGGGCTGCACATGATGTTGTAGTTTTAAGAGATGCTTTGGAACGTGAAAATGGTCTTCATGTCCCCCAAGGAAAATTCTACCTAGTTGATGTTGGATACGGAGCCAAACCGGGATTTTTGCCACCCTTTAGAAGCACCCGGTATCATCTAAATGAGTGGGGAAACAATCCGGTCCAAAATGAGAAGGAGTTGTTCAACCTTAGACACTCATCCCTTCGTATCACTGTTGAACGTGCATTTGGGTCACTGAAGAGGAGGTTCAAAATTCTTGATGATGCCACACCATTTTTCCCCTTTCAGACTCAAGTAAACATTGTTGTAGCTTGTTGTATTATTCATAATTGGGTGATAAATGATGATATTGATGAGCTTGTGATGGGCCCAAATGAGTCCATAATTCAAGACAACGATACTTCTACGGTTGGCCAACCAAACGACCACGCATGGATGGTTCAATTTAGGCAAGGACTTGCAGATCAGATGTGGGCCGATCGTCAAAATCACCATGGAAACTAA
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| Protein seq | MESSFRGRKNHATQNVMAAVDFDLRFTYVLAGWEGAAHDVVVLRDALERENGLHVPQGKFYLVDVGYGAKPGFLPPFRSTRYHLNEWGNNPVQNEKELFNLRHSSLRITVERAFGSLKRRFKILDDATPFFPFQTQVNIVVACCIIHNWVINDDIDELVMGPNESIIQDNDTSTVGQPNDHAWMVQFRQGLADQMWADRQNHHGN
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os03g41200 | LOC_Os03g41200.6 | Chr03 | 22912599 | 22918539 | - | MSU_osa1r7 | ||
| CDS seq | ATGGAGTCGTCTTTTCGTGGTAGGAAGAATCATGCTACACAAAATGTAATGGCAGCAGTAGATTTTGATCTTCGGTTCACATATGTGTTGGCTGGTTGGGAGGGGGCTGCACATGATGTTGTAGTTTTAAGAGATGCTTTGGAACGTGAAAATGGTCTTCATGTCCCCCAAGGAAAATTCTACCTAGTTGATGTTGGATACGGAGCCAAACCGGGATTTTTGCCACCCTTTAGAAGCACCCGGTATCATCTAAATGAGTGGGGAAACAATCCGGTCCAAAATGAGAAGGAGTTGTTCAACCTTAGACACTCATCCCTTCGTATCACTGTTGAACGTGCATTTGGGTCACTGAAGAGGAGGTTCAAAATTCTTGATGATGCCACACCATTTTTCCCCTTTCAGACTCAAGTAAACATTGTTGTAGCTTGTTGTATTATTCATAATTGGGTGATAAATGATGATATTGATGAGCTTGTGATGGGCCCAAATGAGTCCATAATTCAAGACAACGATACTTCTACGGTTGGCCAACCAAACGACCACGCATGGATGGTTCAATTTAGGCAAGGACTTGCAGATCAGATGTGGGCCGATCGTCAAAATCACCATGGAAACTAA
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| Protein seq | MESSFRGRKNHATQNVMAAVDFDLRFTYVLAGWEGAAHDVVVLRDALERENGLHVPQGKFYLVDVGYGAKPGFLPPFRSTRYHLNEWGNNPVQNEKELFNLRHSSLRITVERAFGSLKRRFKILDDATPFFPFQTQVNIVVACCIIHNWVINDDIDELVMGPNESIIQDNDTSTVGQPNDHAWMVQFRQGLADQMWADRQNHHGN
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 1.124554 | 1.496335 | 4.149008 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_03g0608700 | RBH | 1.675759 | 2.230539 | 16.169676 |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | Os03g0608700 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0027020 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_03g0026780 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | NA | NA | NA | NA | NA |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0027050 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0027080 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0027180 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0026900 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0026870 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G026870 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0026870 | RBH | 0.0 | 0.0 | 0.0 |
