Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os03g40160 | OGI:01011440 | 16/16 | Nipponbare | IRGSP 1.0 | MSU | Chr03:22314403-22321662 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | TTAGCCATCTGTCTTTCTTTTCTTAGTCCCTTTTTGCTCCATTAATACTTGTGTTGTTGCTTCTTGTTTTTTCCCTTTATTTGTCTTCTTTGAACCATCAGTTTGTTCTTCCTCTGCATTCTGCAATTGCAATCAAATTCAAATTAAATATTTTAAATCAAATGAGAATTCTTAAAATAAATACTTTTTTACCTTTTGTGCTGTGTTTTTTGTCTTTCTAATTTTCTTTCTTGGCAAATCAAATTCAATGTGCTTTAGTGGGCATGTTGGAAAAGTGTGATCTGTTCGTTGACAATAACTGCAATGATAAACTTCTTTACTCTGTAATTCCTCTCTAAATGATTTGTATCTTTGAGATGGTCTTCCCTTTGACTTTGCTATGTCTGGATCTATCAAAATTTCTTCATTGTTTTCTTCTGTTTCTTCAATGACTTCTCCATTTGTTGTATCTATTTTGTCTATCTCCATTTGCTGCTTTGTTCTTTGCTCTGAATTCATTGATATTGATTCTTTTTCTAACTTGTCAATCTGATCAACTGTAAATTGGAACGAATCAATACTTTTTGATCCTTGTGAGGCTATTTCAGCACATTTCCTTGACAGAATATTGAATCTGAGGATTGAGCTCTCCGATAAAGGTATAATTCTATCTTCAAAATCATATTTTTCTTTGTAATCCTTTTTTCTCCACCGATCGATAATATATTTCTTTGGAATCTTCATAATGTTGAGGTGAAGCATAATTTTCAATATGTGGGAGCAAAGAAGGCCATCTTTCTCAAATTTTGAGCAAATACAAGTGTATTCCTCCTTTTCAGAGTCAACAATTACAAGGTACTTCCTTCTTCTTACTACTTTTATTTTCTGATTCAATGCAAGAAAAACTTCATAAGTCTTCAATTTCTCGACCTCAATCAATTGTAATCTTGTTGTCCTCTTAAGTTCAACTTGGAACTTTTTGAATATTTTTGAATTGTACAGCTTGACAGCTTGGTACTCAATGTAGTAATGAGACCAAAGTTTGCTTGGCCTTTTTGTCCTTGAATTATGATCATCTAGCTGCTCCAAATTCTGAATAGTGTCCATTACTCTGACATATTCTATCAAAAAGCTTATTATACTGTATTGTGGACCAACATCTTTCTTAAACCTTGAATTTGTACCTTCACTTAGAGCTGTGCTTTTTATGAATGGACAAAAATTTGTTTTGAAGTATACTGGTATGAATCTCTTTCTAATTGACCACATGTGCTTCAAAAAGTAGATGTGCTGAACCTCATAGGAATCAACCATTTCATTCCACAAATATTCAAATTCTTCTTCAGTAACTGAATTGTTCATTATATCCTCATACTCATCATACAACCCTTCTTTTGACTTGAACAAAGTTCCAGACAGATTGAATGCTTTCCTTACTATATGAAAGAAGCAATTCCTATGTGTTGAATTTGGAAAAATCTGTCTTATTGCTGACCTCATAGCTCCGTCCTGATCAGTTATAATTGTTTTTTATGCTTTTTCTGACATTGCTTTCAAAAAAGTTATGAACAACCATTTAAATGTTTCTGCAGTCTCATCATGCAGAAAGGCACACCCAAAAACAATTGTATTTCCATGTCATGAAATCCCAACAAATGGAGCAAATGGAAGATTGTATCTATTTGTGAAATATGTTGTATCAAAACTAACAACATCTCCATACTTCTCGTACTAGTCAATTGACCTTCCATCAGTCCAAAACAAATTTGTCACCTTCTTATTCTCATCCAAATCAAATTCATAAAAGAACTTTGGATCTTTCTCCTTCTTCTTTCTGAAAAATTGAAGAACTTGCATCATATCATTGCTACTTGTCTCTTTATTTATACAAGTTCTCACATTACTAACATCCTTCTTAGTATAAGGCAAAGATGTCAGCCCTCCTCTCAAAGTTGACAAAATCACAATCATATGCCTTGTGGGAATATTGCATTCCTTTAGTGTCCTTATCATCATTTTCTCTTCTGTTGTCATATTTTTGTGTGACTTCAAGAATCTAACTTCATCTCTTGGACTCATCTTATGATTGTGATCTAAATTAACCCTTATAATTCTCCAAATCAAATTTCTCTTAGAAATTACCAGTGCACAGTTACAACTTGTGGCTTTAATCTCATTATTGTTTCTCTCTGCTACTACTGTCTCTTCTGTTTCTTCTTCTTGTGATTCTGACTTTGCTTTTCCATGTCGATTGCATTTGAATGTTACTCTAATCACTTCTCCATTCCTTTTTTTGCTTGTACTGTGGTAACTGTGAGCAATGACAACAGAAAATCCAGCCAACAAAGCATAAAAGTTAAAGAAATCGTGTGCTTCTTTAATTGATTTGAACTGCATATCAACTCTTGGAATGTACTTCGCATCAATTGCTGCATTATTTCCTTTTGTAGCTTCTTCTTGTTCTTGCTCCAAAAAATTGTTTATATCTTCTTCTGTCAACATTTCTCCATTTGCATCTAAATCATTACTTTCCACTGTATCAACATTTGTTGTTGCTTGATTTCCAATTTCAGTACTGTTGTCAGCTGAATTTTGCACCTGCTTATTCAAAAATTCAATTTCATATTTCAAACAATTATTTTTTAAAAAGTTTTTTTCTTTAATTTCACAACAATTATTATCAAATCAAATTTTATCTTTTAGATTTGAATAACATTCTTCAAATGTAAAATTTTCAGTAATGAAAAGTTCTTAGTAAATCTTACATTTTGACCGTTTGACAGATTGAACATATCAAGATTCCAATTTTCCAATTCATTATCTTCCAGATCCTCATCTTCAACCTTTAAAAATAGTTAGAACAAATAATATCATAAGTAAACTCAAACATTAATTGTATCACAAATACGATTTATAGAAACAAAAAAATAAATTAATTCATACCTGATTTGTATTAGCATAATCCATATCAAAAGGAATATCTTATGTTCTACTTGTTGTCAATATCATTGAATTCTACACAAAAAGTAATTCAAATAATAAGACAATTATTTAAAATTTAATACATATTTACTATTTTCTTTCTTCTTATGAAATATGTGAGTACCTGAAATGCTCTTGGTGTAGCAACAAAGTTTGATTCTGTTGATATTTCTTGCTGCATTTGAAATTTAAAATGTTAGTTTTACACATTAATAATATTGTTTATCTGTCTTCAACATTACATTTATTACACTTGTAAAATACCTGAACTTCAGATATTGAAGGTTGAGATGATATAATTTGTTCCATGAGACTTGTATATGAAAAATTTTGAGCCTGCAAATTGAAAACAAATTTATTTTATGACATGTATTGCTGATTTTTGTTTGATATTATAAATTCTGTCATTCCAAAACTTACTCCTAAAAGAGACCATTCATCATGTAGAGTACAATTGTTGTACTCATCACTTGAATTTGTTTTTTCTCTATTTAATTTCATCTTGTCGTTGATGCTTATTTCTTCTTGAGATGCCTGCAAATAAACATAACTCAAAATATAAACATAACTCATTACTCATTACTCATTTTAGTCTCTGCATATAAACATAACTCAAAATATGAAAGTAATGATTTGTTTTCTCTGAATTTTTCAGATTTGCTGCAGAGTCCAACAAAATTAAATAAAAGGTAAATCAAATTGCTTTACTTGTTTATATGAAATATATACTGCTTCTAGGAGTTACATGTATGTTCAACTCTATTTGCAGTGTTAATTCTATGTTTTTTTTTAATTTTTGGACTGTAATTTGTTTTTATGTTGATTACTAGACATATATATGAATATTAAGACCATTAAGACTGTGCAAATACACAATATCACTCTGTGATATTTTTTTAACTAAAGTGTTAATTTTTTTCATTAGTTACAGTGAACTAATATTGGAATTACAGTGTTTCTTAACTGTAATTTTAATTTTATTTCACTGTAACTTATTTGAAAATTATAATATCTACATAGTAAATGAGTGTCTGCATATTTATTTGTAAATGAAATTGTTTATGTCATCATGAAATCACTAATTATCTATTTTTGACAGATATTTTGACAATATATGATTCAAACCAGCTAAATTTTATTTTAACTATGATGTTTTGTCTAAATGTGATCTTTGCAGATTATATTTGAAACTAATTATGTTTCTTACCTGAAATCAATGTATTTGCGTTATGTTCTGTCAAAACTAATTGAGTCATATTCTGAATGTTTCCATGCTGAATGCTTCTTTCTGCATCTTTGTTATCTTTGTTTCCTGCAGAACATAATTTGTAATATAATTCAAATCAGTACATCAGTAATTAAATTTGACATATATAGATATATCCAAAGAAAGAAAGATATAACTCAAAGTGGTAATAGTACCTGTATCCAAAGAAATACTTCTTCCTGCTTCATAGAAATTAAAAATATAATAAGTTATTTCACTGTGATATTTGGAGAATATCTAGATGTAACAAATATTCAAATTAAAATTCACCTATAATCTCTGTATCCATAGAAATGCTTCTCCCTGCTTGTCCATTATATTTGTTTCCTGCAAAAAACAGAAGGTTTAAAACACAAGAATATAATTTGCAGTGAACTAATACTAGAATTACAGTCATTTTTATATGTAATTTTATTTTGAAGGGAGAAGCATTGATTTGTGCTTGTATTTTAAAGTTTTAGGCCAGTGATGAATCTCTATTTAGTATTAGTTTCAGCGAAAATATCTTTTTTGCCAACTCTGAAATTTATCTTTATATTAAATATCAATTTTTTTTATTGTCCTCTGTGTTGTTTGTTTACTTGTCTAAGAGCACCAATAATAAAGAAAATCTTCTCATCATCATAGGCGAAATTTTTGCCTTCACTTGTCAAGCACCTTTTTACCTTTGCTTTTCCCAAAATTAGTCCATCATCCTTGTACTTCAAATTAACATCTGTAAAGCAAAATAATCTAGTGTACTAGCTTCTTTTTGTTTTTATATATGCTAATTTGAAGTGCAAGAATTATATACTAGTTTTTGAGAATGGTGCATGTAAAAAGGTGCTTGACAATCTATAGCTAACTAATTCTTTTGAGCTTGCAAAATTGATAAAAATTTTGCCTATGTGAATATTGAAAAAAATTATAGTCTAATACTAAGAAATGTCCATTTTTTTTGTACTAATTGAAGTGGACAATTTCTGAGGCCATATATATGATATTTTTTTGTTTTTGTATACCTTTTTTTGTGTCTAAAGAAATGCTTCTCCCTGATTGTCCATTATCTTTGTTTCCTGAAAAAAACAGAAGGTTTAAAACACAAGATTATAAATTACAGTGAACTAATACTAGAATTACATTTATTTTTATATGTAATTTTATTACTATTTAACTATAATTTGTTTCAATTTGCTGATTTCAGCACCAATTTTTAATTGTGAAATTAAATAGTTTTTGAATTGAATTCAGTACCATTGTACAGCTTAGTGTTTTTGTTTTTTATTAGATTCAGCTGAAGTGTTTCAGCTTAGTTTTTTGCTTATTTTTCTCTCTGCATTTCTTCTATGCTTGGAGTACTAATAACCTGTTATGTGCTTGATGAATCTGAAACAATTTCAATTTGAAAATAAAACTGCCTTAGATTTAAAGTTCCCTGTATTTACATGCATATTGAACTAAAATTACAGTGTTCTTTCGTATATGTTTTTATTATTCTTTCACTGTAACTTGTTTGAAAATTGTTAAATGACTGAAAATAATGTAAGCAAATCTTAATTTTGCTTCTCACCAGGCAAGAAAATAATTTATACCTGTTCTTGATTCTTGTCTATTCACTTTGGTGGTGTATTCCTTGTGAATTCCTTCTGCATTTGCTGGAACTTGAGTCATATCTGCACAATCATTGACGTTACGTTTTAGTCAATACTAGACATTTCATTTTTGCTTTGAATTACTTTTTTTTAGATTTGTTGTATAGTCCTTATAATGTTGTAATGAATAGTAATAAAATTTGCTTTTAGTTGTTGATTTGATATGAAATATGTACTGCTTCTAGAAGTTACATGTTTGTTGAACTAAATTTACAGTGTTCCTTCTATGTAATTTTATAAATATTTGACTGTAACTAGTTTGTATATTGATTTGTAGACAAATATGTGAAAATTAAGACCATTATGTGCTCTTTTGAATATACTGCTATCATGCAAATACACAATTTCACTCTATGATAATTGGTGATTTCTAAAATATTTGAAATGAAACAAAAATAAAAGTCAAGTATGAGGAATACATACCTTTGGAAGTGTCTTTTGATTTTACTTGTTCATTTGTCTCCATTTCCTGTATGCTTGAAGAACCGATGACTTGTTCTATGCTTGATGAATCTGAAACCATTTCAATTTGAAAATAAAACTGCCTTAGATCATGCTTTTGTTAGAATTTGTACAGTGTTTCCTGCAGTTACATGCATATTGAACTAAAATTACAGTGTTCTTTTGTATGTATTTTTATTATTCTTTCACTGTAACTTGTTTGAAAATTGTTAAATGACTGAAAATAATGTAAGCAAATCTTAATTTTGCTTCTCATCAGGCAAGAAAATAATTTATACCTGTTCTTGATTCTTTTCTGATCACTTTGGTGGTGTATTCCTTGTGAAATTCTTCTGCATTTGCTGAAACTTGAGTCATATCTGCACAATCATTGACAGTACATTCAGATTGACTATATGAGTTCATATTAGAACAGATTCACACTATTCACCATTCTGAAAATTTCAGTGATTTGCCCAGTTCTAAAATGACAGTTACAGTGATTTGCCCAATTTACTTACAGTGGTCAGATTTACTTTCAGATTGACTCTATTTAGTTCATATTAGAATAGATTCATTTTTTTAGATCTAATCAGTTTCTACATTTCTAACCTCATTAACTTTTCTTTACAGATCTGATCAAACAAATTCCAAAAGAAGAATCAAATTCTGAAAAGAACCAAGCAGGTAATATTTGGAGAATTTTTCTGTTCACTCACCTTTGTTCTTCTTGGACTTGTCTTTTGTGCTCTTTCTGCTCTTCGATTCTTTTTTTTGGAGTTCTTTGGATTGACCTTTAGTACCAGTTTCTTTGATAGATTTGATATTCTTTCCTGACATTTCCTTCTTTTCTGGATCTTGATCTTTTCCTAAGCGTATCTTTCTCTTCTTGATCTCTTCTGAATTCATCTTGATTTTGGATTGATGTTTTGGGGGATCTTTCTCTTCCTCTAGCTCCAT
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| CDS seq | ATGGAACAAATTATATCATCTCAACCTTCAATATCTGAAGTTCAGCAAGAAATATCAACAGAATCAAACTTTGTTGCTACACCAAGAGCATTTCAGGTTGAAGATGAGGATCTGGAAGATAATGAATTGGAAAATTGGAATCTTGATATGTTCAATCTGTCAAACGGTCAAAATGTGCAAAATTCAGCTGACAACAGTACTGAAATTGGAAATCAAGCAACAACAAATGTTGATACAGTGGAAAGTAATGATTTAGATGCAAATGGAGAAATGTTGACAGAAGAAGATATAAACAATTTTTTGGAGCAAGAACAAGAAGAAGCTACAAAAGGAAATAATGCAGCAATTGATGCGAAGTACATTCCAAGAGTTGATATGCAGTTCAAATCAATTAAAGAAGCACACGATTTCTTTAACTTTTATGCTTTGTTGGCTGGATTTTCTGTTGTCATTGCTCACAGTTACCACAGTACAAGCAAAAAAAGGAATGGAGAAGTGATTAGAGTAACATTCAAATGCAATCGACATGGAAAAGCAAAGTCAGAATCACAAGAAGAAGAAACAGAAGAGACAGTAGTAGCAGAGAGAAACAATAATGAGATTAAAGCCACAAGTTGTAACTGTGCACTGGTAATTTCTAAGAGAAATTTGATTTGGAGAATTATAAGGGTTAATTTAGATCACAATCATAAGATGAGTCCAAGAGATGAAGTTAGATTCTTGAAGTCACACAAAAATATGACAACAGAAGAGAAAATGATGATAAGGACACTAAAGGAATGCAATATTCCCACAAGGCATATGATTGTGATTTTGTCAACTTTGAGAGGAGGGCTGACATCTTTGCCTTATACTAAGAAGGATGTTAGTAATGTGAGAACTTGTATAAATAAAGAGACAAGTAGCAATGATATGATGCAAGTTCTTCAATTTTTCAGAAAGAAGAAGGAGAAAGATCCAAAGTTCTTTTATGAATTTGATTTGGATGAGAATAAGAAGGACGGAGCTATGAGGTCAGCAATAAGACAGATTTTTCCAAATTCAACACATAGGAATTGCTTCTTTCATATAGTAAGGAAAGCATTCAATCTGTCTGGAACTTTGTTCAAGTCAAAAGAAGGGTTGTATGATGAGTATGAGGATATAATGAACAATTCAGTTACTGAAGAAGAATTTGAATATTTGTGGAATGAAATGGTTGATTCCTATGAGGTTCAGCACATCTACTTTTTGAAGCACATGTGGTCAATTAGAAAGAGATTCATACCAGTATACTTCAAAACAAATTTTTGTCCATTCATAAAAAGCACAGCTCTAAGTGAAGGTACAAATTCAAGGTTTAAGAAAGATGTTGGTCCACAATACAGTATAATAAGCTTTTTGATAGAATATGTCAGAGTAATGGACACTATTCAGAATTTGGAGCAGCTAGATGATCATAATTCAAGGACAAAAAGGCCAAGCAAACTTTGGTCTCATTACTACATTGAGTACCAAGCTGTCAAGCTGTACAATTCAAAAATATTCAAAAAGTTCCAAGTTGAACTTAAGAGGACAACAAGATTACAATTGATTGAGGTCGAGAAATTGAAGACTTATGAAGTTTTTCTTGCATTGAATCAGAAAATAAAAGTAGTAAGAAGAAGGAAGTACCTTGTAATTGTTGACTCTGAAAAGGAGGAATACACTTGTATTTGCTCAAAATTTGAGAAAGATGGCCTTCTTTGCTCCCACATATTGAAAATTATGCTTCACCTCAACATTATGAAGATTCCAAAGAAATATATTATCGATCGGTGGAGAAAAAAGGATTACAAAGAAAAATATGATTTTGAAGATAGAATTATACCTTTATCGGAGAGCTCAATCCTCAGATTCAATATTCTGTCAAGGAAATGTGCTGAAATAGCCTCACAAGGATCAAAAAGTATTGATTCGTTCCAATTTACAGTTGATCAGATTGACAAGTTAGAAAAAGAATCAATATCAATGAATTCAGAGCAAAGAACAAAGCAGCAAATGGAGATAGACAAAATAGATACAACAAATGGAGAAGTCATTGAAGAAACAGAAGAAAACAATGAAGAAATTTTGATAGATCCAGACATAGCAAAGTCAAAGGGAAGACCATCTCAAAGATACAAATCATTTAGAGAGGAATTACAGAGTAAAGAAGTTTATCATTGCAGTTATTGTCAACGAACAGATCACACTTTTCCAACATGCCCACTAAAGCACATTGAATTTGATTTGCCAAGAAAGAAAATTAGAAAGACAAAAAACACAGCACAAAAGAATGCAGAGGAAGAACAAACTGATGGTTCAAAGAAGACAAATAAAGGGAAAAAACAAGAAGCAACAACACAAGTATTAATGGAGCAAAAAGGGACTAAGAAAAGAAAGACAGATGGCTAA
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| Protein seq | MEQIISSQPSISEVQQEISTESNFVATPRAFQVEDEDLEDNELENWNLDMFNLSNGQNVQNSADNSTEIGNQATTNVDTVESNDLDANGEMLTEEDINNFLEQEQEEATKGNNAAIDAKYIPRVDMQFKSIKEAHDFFNFYALLAGFSVVIAHSYHSTSKKRNGEVIRVTFKCNRHGKAKSESQEEETEETVVAERNNNEIKATSCNCALVISKRNLIWRIIRVNLDHNHKMSPRDEVRFLKSHKNMTTEEKMMIRTLKECNIPTRHMIVILSTLRGGLTSLPYTKKDVSNVRTCINKETSSNDMMQVLQFFRKKKEKDPKFFYEFDLDENKKDGAMRSAIRQIFPNSTHRNCFFHIVRKAFNLSGTLFKSKEGLYDEYEDIMNNSVTEEEFEYLWNEMVDSYEVQHIYFLKHMWSIRKRFIPVYFKTNFCPFIKSTALSEGTNSRFKKDVGPQYSIISFLIEYVRVMDTIQNLEQLDDHNSRTKRPSKLWSHYYIEYQAVKLYNSKIFKKFQVELKRTTRLQLIEVEKLKTYEVFLALNQKIKVVRRRKYLVIVDSEKEEYTCICSKFEKDGLLCSHILKIMLHLNIMKIPKKYIIDRWRKKDYKEKYDFEDRIIPLSESSILRFNILSRKCAEIASQGSKSIDSFQFTVDQIDKLEKESISMNSEQRTKQQMEIDKIDTTNGEVIEETEENNEEILIDPDIAKSKGRPSQRYKSFREELQSKEVYHCSYCQRTDHTFPTCPLKHIEFDLPRKKIRKTKNTAQKNAEEEQTDGSKKTNKGKKQEATTQVLMEQKGTKKRKTDG |
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| Function | Protein FAR1-RELATED SEQUENCE 5 [UniProtKB/Swiss-Prot:Q9SZL8] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os03g40160 | LOC_Os03g40160.1 | Chr03 | 22314403 | 22321662 | - | MSU_osa1r7 | ||
| CDS seq | ATGGAACAAATTATATCATCTCAACCTTCAATATCTGAAGTTCAGCAAGAAATATCAACAGAATCAAACTTTGTTGCTACACCAAGAGCATTTCAGGTTGAAGATGAGGATCTGGAAGATAATGAATTGGAAAATTGGAATCTTGATATGTTCAATCTGTCAAACGGTCAAAATGTGCAAAATTCAGCTGACAACAGTACTGAAATTGGAAATCAAGCAACAACAAATGTTGATACAGTGGAAAGTAATGATTTAGATGCAAATGGAGAAATGTTGACAGAAGAAGATATAAACAATTTTTTGGAGCAAGAACAAGAAGAAGCTACAAAAGGAAATAATGCAGCAATTGATGCGAAGTACATTCCAAGAGTTGATATGCAGTTCAAATCAATTAAAGAAGCACACGATTTCTTTAACTTTTATGCTTTGTTGGCTGGATTTTCTGTTGTCATTGCTCACAGTTACCACAGTACAAGCAAAAAAAGGAATGGAGAAGTGATTAGAGTAACATTCAAATGCAATCGACATGGAAAAGCAAAGTCAGAATCACAAGAAGAAGAAACAGAAGAGACAGTAGTAGCAGAGAGAAACAATAATGAGATTAAAGCCACAAGTTGTAACTGTGCACTGGTAATTTCTAAGAGAAATTTGATTTGGAGAATTATAAGGGTTAATTTAGATCACAATCATAAGATGAGTCCAAGAGATGAAGTTAGATTCTTGAAGTCACACAAAAATATGACAACAGAAGAGAAAATGATGATAAGGACACTAAAGGAATGCAATATTCCCACAAGGCATATGATTGTGATTTTGTCAACTTTGAGAGGAGGGCTGACATCTTTGCCTTATACTAAGAAGGATGTTAGTAATGTGAGAACTTGTATAAATAAAGAGACAAGTAGCAATGATATGATGCAAGTTCTTCAATTTTTCAGAAAGAAGAAGGAGAAAGATCCAAAGTTCTTTTATGAATTTGATTTGGATGAGAATAAGAAGGACGGAGCTATGAGGTCAGCAATAAGACAGATTTTTCCAAATTCAACACATAGGAATTGCTTCTTTCATATAGTAAGGAAAGCATTCAATCTGTCTGGAACTTTGTTCAAGTCAAAAGAAGGGTTGTATGATGAGTATGAGGATATAATGAACAATTCAGTTACTGAAGAAGAATTTGAATATTTGTGGAATGAAATGGTTGATTCCTATGAGGTTCAGCACATCTACTTTTTGAAGCACATGTGGTCAATTAGAAAGAGATTCATACCAGTATACTTCAAAACAAATTTTTGTCCATTCATAAAAAGCACAGCTCTAAGTGAAGGTACAAATTCAAGGTTTAAGAAAGATGTTGGTCCACAATACAGTATAATAAGCTTTTTGATAGAATATGTCAGAGTAATGGACACTATTCAGAATTTGGAGCAGCTAGATGATCATAATTCAAGGACAAAAAGGCCAAGCAAACTTTGGTCTCATTACTACATTGAGTACCAAGCTGTCAAGCTGTACAATTCAAAAATATTCAAAAAGTTCCAAGTTGAACTTAAGAGGACAACAAGATTACAATTGATTGAGGTCGAGAAATTGAAGACTTATGAAGTTTTTCTTGCATTGAATCAGAAAATAAAAGTAGTAAGAAGAAGGAAGTACCTTGTAATTGTTGACTCTGAAAAGGAGGAATACACTTGTATTTGCTCAAAATTTGAGAAAGATGGCCTTCTTTGCTCCCACATATTGAAAATTATGCTTCACCTCAACATTATGAAGATTCCAAAGAAATATATTATCGATCGGTGGAGAAAAAAGGATTACAAAGAAAAATATGATTTTGAAGATAGAATTATACCTTTATCGGAGAGCTCAATCCTCAGATTCAATATTCTGTCAAGGAAATGTGCTGAAATAGCCTCACAAGGATCAAAAAGTATTGATTCGTTCCAATTTACAGTTGATCAGATTGACAAGTTAGAAAAAGAATCAATATCAATGAATTCAGAGCAAAGAACAAAGCAGCAAATGGAGATAGACAAAATAGATACAACAAATGGAGAAGTCATTGAAGAAACAGAAGAAAACAATGAAGAAATTTTGATAGATCCAGACATAGCAAAGTCAAAGGGAAGACCATCTCAAAGATACAAATCATTTAGAGAGGAATTACAGAGTAAAGAAGTTTATCATTGCAGTTATTGTCAACGAACAGATCACACTTTTCCAACATGCCCACTAAAGCACATTGAATTTGATTTGCCAAGAAAGAAAATTAGAAAGACAAAAAACACAGCACAAAAGAATGCAGAGGAAGAACAAACTGATGGTTCAAAGAAGACAAATAAAGGGAAAAAACAAGAAGCAACAACACAAGTATTAATGGAGCAAAAAGGGACTAAGAAAAGAAAGACAGATGGCTAA
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| Protein seq | MEQIISSQPSISEVQQEISTESNFVATPRAFQVEDEDLEDNELENWNLDMFNLSNGQNVQNSADNSTEIGNQATTNVDTVESNDLDANGEMLTEEDINNFLEQEQEEATKGNNAAIDAKYIPRVDMQFKSIKEAHDFFNFYALLAGFSVVIAHSYHSTSKKRNGEVIRVTFKCNRHGKAKSESQEEETEETVVAERNNNEIKATSCNCALVISKRNLIWRIIRVNLDHNHKMSPRDEVRFLKSHKNMTTEEKMMIRTLKECNIPTRHMIVILSTLRGGLTSLPYTKKDVSNVRTCINKETSSNDMMQVLQFFRKKKEKDPKFFYEFDLDENKKDGAMRSAIRQIFPNSTHRNCFFHIVRKAFNLSGTLFKSKEGLYDEYEDIMNNSVTEEEFEYLWNEMVDSYEVQHIYFLKHMWSIRKRFIPVYFKTNFCPFIKSTALSEGTNSRFKKDVGPQYSIISFLIEYVRVMDTIQNLEQLDDHNSRTKRPSKLWSHYYIEYQAVKLYNSKIFKKFQVELKRTTRLQLIEVEKLKTYEVFLALNQKIKVVRRRKYLVIVDSEKEEYTCICSKFEKDGLLCSHILKIMLHLNIMKIPKKYIIDRWRKKDYKEKYDFEDRIIPLSESSILRFNILSRKCAEIASQGSKSIDSFQFTVDQIDKLEKESISMNSEQRTKQQMEIDKIDTTNGEVIEETEENNEEILIDPDIAKSKGRPSQRYKSFREELQSKEVYHCSYCQRTDHTFPTCPLKHIEFDLPRKKIRKTKNTAQKNAEEEQTDGSKKTNKGKKQEATTQVLMEQKGTKKRKTDG
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g24970 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_03g0025550 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0025330 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0025380 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0028450 | SBH | 0.637942 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0041260 | SBH | 6.719732 | 6.972945 | 9.484837 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_03G0384000 | RBH | 0.012975 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_03g0032700 | RBH | 0.053046 | 0.000000 | 0.272941 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0384700 | SBH | 2.1746865 | 5.271519 | 1.922823 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0037530 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0037540 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0032270 | SBH | 7.427455 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0028030 | SBH | 0.812701 | 2.598344 | 2.006791 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0037220 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G027950 | SBH | 1.357830 | 4.785180 | 2.571185 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0027970 | SBH | 0.0 | 0.0 | 0.0 |
