Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
LOC_Os03g37250 OGI:03058040 | 3/16 Nipponbare | IRGSP 1.0 | MSU Chr03:20642169-20649649
Gene Symbol -
DNA seq

TCAAACATTTCGATTATGATAACGACGCAACCCTTGCAGGTATCGAGTCGATTGAATTAAAGCTGCTTCTCGGGCTTCTTCTAGTCGGTTGATGTCGTCTACTCGGCCCTCTTCATAGCCCTCCTCGTTGAAGTTCCGAAATCGTAGTGATTCAAATTCCACTTCACTCGGCAACATTGCTTCTGCGCCATAAACCAAAAAGAATGGCGACTGGCCGGTAGCCCGACTAGGAGTAGTGCGTAAAGACCAAAGTACGGACGGCAGCTGATCTACCCACTTGCCAGCATAGGGGCGTAGTCGGTCGAAAACTCGTGCTTTGATCCCTTGCAGTATCATGCTGTTAGCGCGCTCAACTTGTCCGTTACTCATGGGGTGTGCCATGGAGGCATAACAAATTTTAATGCCGAAGTCTTCACAAAAGTCTTTAAATGTTCCGCCAGTGAATTGAGTGCCATTATCAGTGATGATCCGATTAGGTACCCCAAACTGATGCACAATGTTGATGAAAAAATCTCTAGCTTTATCTGCTGTGATCGTGATAACCGGTTTAGCCTCAATCCATTTGGAGAATTTGTCGATAGCCACGAAGAGATGTGTGTAACCGCCGACTGCCCTTTTAAATGGGCCGACCATGTCAAGCCCCCAGATCGCAAACGGCCAGGACAACGGGATGGTTTGCAACTCTTGGGCTGGTAAATGAGTTTGTCTGGCAAAAAATTGACAACCTTCGCATGTCCGCACAATCTTATCTACATCGGACACAGCTGTAGGCCAAAAAAAACCTTGCCGGTAAGCTTTGCCGACAATGGTCCGTGCAGCAGCATGATTACCACAAATACCAGAGTGTATATCCTTCAACAATTGTTTCCCTTCCTCCAAAGATACATAGCACTGCAGTATTCCTGATGGACTTTTCTTGTACAGCTCAGTCTCATGAATAATGTAAAGTCTGCTGCGCCTGGAAATCCGCTCGACTTCATTTTTGTCTTGAGGGAGTTCTTGTTTGCTCAAAAACTTTATAAACGGTTCTCTCCAATCGGCTTCAAGCATGCCTACGCCTTGAGTATCCATGGCTTCAGTTATCTCCTTTCTGGGTACGGTCGGTTCGTAAAGATGTTCGACGAACACATCTGAAGGAGCTGCTTCCAGTTTTGAACCAAAATTGGCCAGTCTGTCGGCTGCCTCATTATTATGTCGGAGGACATGGGTGAGCTCGAGTCCGTCGAATTTATCTTCCAGCTTACGTACCTCTTGTCGGTAAGCGGTCATATTAACATCTAGACATGACCACTCTTTCGTGACTTGATTAACACCCAACTGAGAGTCTCCACGGACGATTAGTCGGCGAATACCTAGAGATATTGCAATCCTTAGTCCATGGAGTAGGGCTTCGTATTCCGCTACGTTATGGGACGCAGAAAAATGTATCCACAATACGTAGCTTAATCTTTCTCCAGTCGGGGAAATCAAGACGACCCCAGCTCCAGTGCCTGTAAGCCTCTTCGACCCATCAAAATGCATAGTCCAATATTCCATCTTTTCCTCTGGCATGTCTTCTTGGCACTCGGTCCACTCGGCAAGGAAATCAGCTAGAGCTTGTGACTTGATCGAAGTTCGTGGTTTGAAAGATATATCCAAAGACATCAATTCTAAGGCCCACTTCGCAATCCGCCCGTTTGCTTCGCGATTATGAAGTATATCCCCGAGTGGAAACGATGTGACCACCGTGACCGAGTGACTTTGAAAATAGTGAGATAATTTCCTGACGGTAATTAAGACACCATATAATAACTTTTGAACCTGAGGATACCTTGTCTTGGAGTCGGCTAAAACCTCGCTGACAAAATAGATTGGTCATTGGACTTTTTGAATATGGCCTTCCTCTTCACGCTCGACAACCAGGACCGTACTCACAACTTGGGAGGTCGCCGACACATATAACAGTAGCGGTTCTTGTGGATGCGGTGAAGCCAATACTGGTGGAGTGGTGAGGAGTTTCTTGAAGTCTTCAAAGGCTTTTTGTGTTTCGGGTCCCCACTGGAAATCGTCAGTTTTCTTCAGCAGCTTGAAGAAGGGCATCCCCCGCTCGCCGAGTCGTGAGACGAACCGGCTGAGCGCCGCCATGCAACCAGTCAACTTTTGGACGTCTTTTTGGGAGCTCGGCGGTTTCATGTTGAGGATGGCGTTGATTTTCTCCGGGTTGGCCTGTATGCCTCTCTGAGATACCATAAATCCGAGCAACTTCCCTGATGGTACTCCGAAGATGCACTTTTCCGGGTTTAGTTTCATCTTGAAAGCACGAATACTTGTGAAAGTTTCTTCTAAATCCGCAATCAGGTCATCCCTCTACTTGGTCTTGACGACTACATTATCAACATAGGCTTCAACATTGCGACCGATCTAAGTTGAAAAACACCTTTGAATCATGCGTTGATAGGTTGCTCCTGCGTTCTTCAATCCAAAGGGCATGGTGATGTAGCAGTAGGCCCCAAAGGGTGTAATAAACGAGGTCTTCAAGTAGTCGGATTCTTTTAGTCGGATCTGATGATATCCCGAGTAACAATCCAAGAAGCTGAGTAGCTCGCAGCCGGCCGTTGAGTCAACCACCTGGTCAATGCGATGTAACCCAAAAGGGTCTTTGGGACAAGATTTTTTGAGGTCGGTATAATCGACACACATTCGCCATTGCCCCGTCTTTTTCCGAACCAGGACTGGGTTAGCCAGCCAGTCGGGATGAAGGACTTCCTTTATGAAACCTGCTGCTAACAGCTTGGTTAATTCCTCCTTGATCGCATCCTTCCTGTCTTGTGCAAAACGGCGGAGTCGTTGCTTGATGGGTTTGGCGTCTTCCTTAACATGTAAAGAGTGCTCAATCACCTCTCTGGGGATACCAGGCATATCGGATGGTTTCCACGCAAAAATATCTTTATTATTCTGAAGAAAGGTGATGAGCGCGCTTTCCTATTTACAATCTAACTCAGCGCCTATTACAGCAGTCTTATCAGGATCGGAGGGATCTAGGGGAATCTTTTTCGCCTTGGCATCACTTTCTTCGGTCTTTGTCAGCTTGGTTGCAGGCACTTCTCCCTCGCCTGCCGTGGTTGCAGACAGTCGGATCTCTTCGCGAGCAAGAGTAGTCTCGTGGGTTTGGGCCATCTCGTAGCTTTCTTTGTCGCATGTGACGGCCTGCTTGATGTCGCTCCGTAGTGATATGACCCCTCGAGGACCAGGCATCTTCATCATCATGTAGGTGTAGTGTGGGACGGCCATAAATTTGGCTAAAGCCGGTCGTCCAAGTATAGCATGATATGCTGTCTCGAAATCGGCAACTTCGAAACAAACATTTTCTGTGCGAAAATTTTCCCGAGTGCCGAAGGTAACTGGAAGAGTGATCTGGCCGAGTGGTGTAGCTGACAATCCTGGGATAACACCGTGGAAGGGTGCATTACTCGGCTTTAATTCCGTGCGAGGAATCTGCATATCGTCCAGGGTCTTAGCGAAAAGGATGTTGAGTGCGCTGCCACCATCGATGAGAGTCCGTCGGAGCTTGACATTGCGAACCACTGGGTCTAGTACCAGGGGGTACCGCCCCGGGTGGACCACTCGGTCGGGATGATCCGAGCGGTCGAACTTAATTGCTGTTTCTGACCACCGAAGATACTGGGGCGTGTTAGGCTGAACCGCATTGATCTCCCGTTCTGTTAGCTTCTGTTTTCTCTTGGACTCATAAGCCAGGGGTCCGCCGAAGATGTGATTAAGTTCTTTGCGATGATCTTGAAAACCAGTCGGGGCATCATCTTCATCATCTTTCTTCTTTGATGTGCCCTGATCTCCGTCTGCAGGTTTGCGTGCGTTCTTGACGTATTGCTCCGCGAACTGTTTGTAGACGAAGCAATCTTTGGCCACGTGGTTGGAATTGGGATGATGCGGACATTGAGAGTTCATTATCTTGTCGAAGGTGTTGACGCGGGGACGTTGTCGGGAAGATGGAGAGGTGGTCGCCACAAGTTCTTCGGGCTTACGCTTGCGATCCTTGTGGTTGTTATTTCCACTCCCTCCTGCAGTCAGCGTGTCCTTCTTTGGCTTCCAAGTGGTGCCCGACTATTTGGACGCGGTGATAGCATCTTCGGCTTCGGCATACTCGTTGGCTTTTTCGAACATCTGCTTAACCGTCCTGGGAGGTTTACGTCCGAACTTACTGACTAGGTCCTCGTGGCGAATGCCTTTAGTGAAGGTGGCGATGATGACGTCGTCGGTGATGTCGGAGATCTTGTTGCGTTGCTCGGAGAAGCGTCGGATGTAATCTCGAAGGGATTCTCCAGACTTCTGAATGACGTTGTAGAGATCAAACTGTGTGCCGGGGCGTTCAAAGGTGCCCTGGAAGTTGGCGATGAAGTGATCACGAAGTTTCGCCCATGATCCGATCATGCCACGGGGTAGTCCGTGGAGCCAGGATCGGGCGGAGTCCGCTAGGGCCACAGGTAGATAGTTTGCCATGGCCTTGCTGTCTCCACCTGCTGCGCGGATTGCGAGTCCGTAGACGGTGAGCCAAGACTCCAGATTGGTGGTGCCGTCATACTTCTCGATTCCAGTCGGTTTGAAGCCGACTGGCCAATCCACTCGACGCAGGTCATTAGTGAAGGCAGCTACTCCATCCACGTCGTCGTCGTAGCGATTTGGTGAATGACGGTGACCTCGTGCTGCACGGCGCTGGTTGATCGTGTCACGAAGGTCGACGGGACGCTGGCGAGGTGGAGAACGAGGCCGTTCAGCTCGGCGCTCCCTGTGACGTTCGGGAAGCGAGTGAACAGATCGTTCGTCGTGACCCCTGCTCCTGCGACTAGATCCTGTGCCGGTGATGCTGAGGCTTGGCTGATGATGAGGGACTCGGCTACCAGTCGGGGTGCGGGTGCTTGCGGAGTTGGCTGGAACCGAGGTAGCGATCATGGTCTTCGTCTGGTTCAAGATGTTGACAACATGATCGGCTTGGTTGAGGGCGTCTTCCTTGAGGAGGGTGTCGAGGAGAGTGATTGCTGCAACCACGTTCTGCTGGGGGGTGCGAAAGACCGCTGTCCCGTCGACGTCTTGTTGCCCAATGAGCTCTCTCGCTCGGCGCCCAGATACCAAGGCGCGGTGCCGTCGATCTTCAGCTTCCTTTGCAATCCGTTCGCGATCTTGTTGTTCACGCTATAGTCGTTCTCGCTCCTGTCGCTGTCGCTCCTCCTCCAGTCGGCGACGTTCAGCTTCTTGCCGTGCGCGATCTTGTTCTGCTTCTCGGGCTCGGCGCTGTTCTTCCGTTTCGTTGTCAGCCATGAATACGCCGAAGAAGAGGGGCGTGTAGTTATCCTCGTAGCTGTCGTCGAAGTTGTCGAAGTCGCCATGGTCGTAGTGGTAGCCGAAGTCGTCATAGTCGAGGATCTCAGTTGGTCGGGAACTGACGCCGGGGGAGCTGAGGTAGCCATCCAACTCTTCCGTCGAGACTGTCCCAAGAGGTTGGAGTATAACGCCAACCTCCCTGGATGTAGACTGGATCGGGGCCGGTGCCGGAGCTCGCCTAGATCTCCGAGTGGGAGATGTTTTGGCTGTGAAGACGGCGGCCAAGTCATCAGGAAGTTTCATCAAGATTGAGGGATAGGACCCGTCGTCTTGATCTGATCGTGGGGGAATAGATTGGATCTCGTCCGAGTGGCTTGAAACCGACTTAGGAGAGATGATCTTGGAGTAGGCCTCGGCCGAGTTCGGAATACCGAACGGCACGGGGACCTGGTTTCTCCCCGACTGGTTTGAATCCGAGTCAAGGAGAGAGATCTTGCCGAAGTCGTTGGTGATGAAGTCGAGGCTGCTGAATCGGAACGCCTGCCCGGGAGGAAGGCGAAGTTGTTGATGCCAGAAACGAAACCCATCGTACTTAGTCGGCGAGACGCCTCCCCTACCTGGCGCGCCAACTGTCGAAACAAGATTTCGGCAATAATAAAGGGGGTGGCTGTCAAGCTAGGAAAGTGGATGGGTTTGGAGACAAGGAATTTTATACAGGTTCAGGCCTTCTTATTAAAGAAGTAATACCCTACTTCTGTCCAGGGATGATTCCGCCGAGTGTGTTATTGATTGTATGATTGAAGAAAAAAGAATCGTGCCCCAAGAGGCACACGGACCCTCCTTATATAGGGGAAGGGATCCGTAATACAAGGTACAGTCCATATCCTAACAGAATATGGGATTACAGATAAAATACAATCGTAACCGACTAGGATCCCGGGTATTTTCTTGACATACAAGTTTAGAATCTAACCCGAGTCCTCGTAAAGATATTCTATCTATATTTGGTACCATATATCCGACTAAAGTATAACTGTCATGCAGATATGGGGTATCCATAATCTCCACAGGAGGACTGAGGAGGTCGCCAGGGTGAGACGAGAGAGGAGGTCCGACGGAGCCAGCGAGTTGGTTGGGGGCGAGCCACCCACCTGAGGACGAGCTCCCGTTGGTTGGGGAAGGCGGCGGCGGGGAGCTCCCATGCGCCAGTTGCTTAGGCTATGGACGTCCACGAATTGGACTGCGTCGTTGACGTTCTTGCCGCCGCCGCTGTCGTAGAGGCACTACCCTTGAATCCAATCTATGTATAGCCCGGCCGGACTAATCTCCTCAAGCCGTATACCCACGTCGTCGATCAACCATGGCGTCGTCGATGGCGGCAGCCGCTGCTGCAGGCTTGTCTCTTGCGCCGACCGCGCGCGTCTGCGCGGCGGCGCCGTGGTCCTCGCGCGCCACTCCCTCCGGCTAGCCGTCGTGCGGCACTGGCCGTGTCGCTGTCCTCGCCACCGGCCGCATGGCGGCGCCGCATCGTCGTCTCCAGCTGCTACGATCATCGTCGACAACCATGCGCACGCGCGTGCCATCCTGCATCGCTAGCAATGACCACAACCACTCCAGCAGCTCCAACGTGGAAGCGGATGAGAGGTTGGCGTTGTGGGCGGGGATGAGCGTCGATGAGCTCGCGGAGGTCAGGAACGCGACGCCGCCGTGGTTCCCGAGCATGGAGGAGATCATGGAGTTATCATGGTAGTTATTCTCGTCAAGGACATCCACAAAAATAATACTTGGTATGCGCCGTCGAAGTAGTCAGACCACCTGAGCTCGTCCAGCACGCCGGCATAGTGGTCCATCATCGCGAAGGGGTTGGCGTGTCCTAGGTCCAGCCACGGCAGGTTAGTCGCAGCGACATTGGCGCTCTGCTCGGCGTCGGTCGTGGCGGGGCTGAGGCTGGCCATGGATGATGGATGTGAGCGTGCTGGAACTAGACGCCGAGGGGACGACGACCGCCAGTGGTTCGCCGCATCCGGCCGTGGCCTGCTCATGCTCAGGCGTGGTGGTAGGCCCGAGAGCGTCGTCGTCGTCGTCGTCAATGAGGGCGCTGTCGCCATCCCGTTCCCGGCGACCGCCACCGCCACCGCCGCAGGCCAGTAGTCGTCGAGCGGCAT

More
CDS seq

ATGCCGCTCGACGACTACTGGCCTGCGGCGGTGGCGGTGGCGGTCGCCGGGAACGGGATGGCGACAGCGCCCTCATTGACGACGACGACGACGACGCTCTCGGGCCTACCACCACGCCTGAGCATGAGCAGGCCACGGCCGGATGCGGCGAACCACTGGCGGTCGTCGTCCCCTCGGCGTCTAGTTCCAGCACGCTCACATCCATCATCCATGGCCAGCCTCAGCCCCGCCACGACCGACGCCGAGCAGAGCGCCAATGTCGCTGCGACTAACCTGCCGTGGCTGGACCTAGGACACGCCAACCCCTTCGCGATGATGGACCACTATGCCGGCGTGCTGGACGAGCTCAGGTGGTCTGACTACTTCGACGGCGCATACCAAGCGTTCCGATTCAGCAGCCTCGACTTCATCACCAACGACTTCGGCAAGATCTCTCTCCTTGACTCGGATTCAAACCAGTCGGGGAGAAACCAGGTCCCCGTGCCGTTCGGTATTCCGAACTCGGCCGAGGCCTACTCCAAGATCATCTCTCCTAAGTCGGTTTCAAGCCACTCGGACGAGATCCAATCTATTCCCCCACGATCAGATCAAGACGACGGGTCCTATCCCTCAATCTTGATGAAACTTCCTGATGACTTGGCCGCCGTCTTCACAGCCAAAACATCTCCCACTCGGAGATCTAGGCGAGCTCCGGCACCGGCCCCGATCCAGTCTACATCCAGGGAGGTTGGCGTTATACTCCAACCTCTTGGGACAGTCTCGACGGAAGAGTTGGATGGCTACCTCAGCTCCCCCGGCGTCAGTTCCCGACCAACTGAGATCCTCGACTATGACGACTTCGGCTACCACTACGACCATGGCGACTTCGACAACTTCGACGACAGCTACGAGGATAACTACACGCCCCTCTTCTTCGGCGTATTCATGGCTGACAACGAAACGGAAGAACAGCGCCGAGCCCGAGAAGCAGAACAAGATCGCGCACGGCAAGAAGCTGAACATCGCGAACGGATTGCAAAGGAAGCTGAAGATCGACGGCACCGCGCCTTGGTATCTGGGCGCCGAGCGAGAGAGCTCATTGGGCAACAAGACGTCGACGGGACAGCGGTCTTTCGCACCCCCCAGCAGAACGTGGTTGCAGCAATCACTCTCCTCGACACCCTCCTCAAGGAAGACGCCCTCAACCAAGCCGATCATGTTGTCAACATCTTGAACCAGACGAAGACCATGATCGCTACCTCGGTTCCAGCCAACTCCGCAAGCACCCGCACCCCGACTGGTAGCCGAGTCCCTCATCATCAGCCAAGCCTCAGCATCACCGGCACAGGATCTAGTCGCAGGAGCAGGGGTCACGACGAACGATCTGTTCACTCGCTTCCCGAACGTCACAGGGAGCGCCGAGCTGAACGGCCTCGTTCTCCACCTCGCCAGCGTCCCGTCGACCTTCGTGACACGATCAACCAGCGCCGTGCAGCACGAGGTCACCGTCATTCACCAAATCGCTACGACGACGACGTGGATGGAGTAGCTGCCTTCACTAATGACCTGCGTCGAGTGGATTGGCCAGTCGGCTTCAAACCGACTGGAATCGAGAAGTATGACGGCACCACCAATCTGGAGTCTTGGCTCACCGTCTACGGACTCGCAATCCGCGCAGCAGGTGGAGACAGCAAGGCCATGGCAAACTATCTACCTGTGGCCCTAGCGGACTCCGCCCGATCCTGGCTCCACGGACTACCCCGTGGCATGATCGGATCATGGGCGAAACTTCGTGATCACTTCATCGCCAACTTCCAGGGCACCTTTGAACGCCCCGGCACACAGTTTGATCTCTACAACGTCATTCAGAAGTCTGGAGAATCCCTTCGAGATTACATCCGACGCTTCTCCGAGCAACGCAACAAGATCTCCGACATCACCGACGACGTCATCATCGCCACCTTCACTAAAGGCATTCGCCACGAGGACCTAGTCAGAGGGAGTGGAAATAACAACCACAAGGATCGCAAGCGTAAGCCCGAAGAACTTGTGGCGACCACCTCTCCATCTTCCCGACAACGTCCCCGCGTCAACACCTTCGACAAGATAATGAACTCTCAATGTCCGCATCATCCCAATTCCAACCACGTGGCCAAAGATTGCTTCGTCTACAAACAGTTCGCGGAGCAATACGTCAAGAACGCACGCAAACCTGCAGACGGAGATCAGGGCACATCAAAGAAGAAAGATGATGAAGATGATGCCCCGACTGGTTTTCAAGATCATCGCAAAGAACTTAATCACATCTTCGGCGGACCCCTGGCTTATGAGTCCAAGAGAAAACAGAAGCTAACAGAACGGGAGATCAATGCGGTTCAGCCTAACACGCCCCAGTATCTTCGGTGGTCAGAAACAGCAATTAAGTTCGACCGCTCGGATCATCCCGACCGAGTGGTCCACCCGGGGCGGTACCCCCTGGTACTAGACCCAGTGGTTCGCAATGTCAAGCTCCGACGGACTCTCATCGATGGTGGCAGCGCACTCAACATCCTTTTCGCTAAGACCCTGGACGATATGCAGATTCCTCGCACGGAATTAAAGCCGAGTAATGCACCCTTCCACGGTGTTATCCCAGGATTGTCAGCTACACCACTCGGCCAGATCACTCTTCCAGTTACCTTCGGCACTCGGGAAAATTTTCGCACAGAAAATGTTTGTTTCGAAGTTGCCGATTTCGAGACAGCATATCATGCTATACTTGGACGACCGGCTTTAGCCAAATTTATGGCCGTCCCACACTACACCTACATGATGATGAAGATGCCTGGTCCTCGAGGGGTCATATCACTACGGAGCGACATCAAGCAGGCCGTCACATGCGACAAAGAAAGCTACGAGATGGCCCAAACCCACGAGACTACTCTTGCTCGCGAAGAGATCCGACTGTCTGCAACCACGGCAGGCGAGGGAGAAGTGCCTGCAACCAAGCTGACAAAGACCGAAGAAAGTGATGCCAAGGCGAAAAAGATTCCCCTAGATCCCTCCGATCCTGATAAGACTGCTAATAATAAAGATATTTTTGCGTGGAAACCATCCGATATGCCTGGTATCCCCAGAGAGGTGATTGAGCACTCTTTACATGTTAAGGAAGACGCCAAACCCATCAAGCAACGACTCCGCCGTTTTGCACAAGACAGGAAGGATGCGATCAAGGAGGAATTAACCAAGCTGTTAGCAGCAGGTTTCATAAAGGAAGTCCTTCATCCCGACTGGCTGGCTAACCCAGTCCTGGTTCGGAAAAAGACGGGGCAATGGCGAATGTGTGTCGATTATACCGACCTCAAAAAATCTTGTCCCAAAGACCCTTTTGGGTTACATCGCATTGACCAGGTGGTTGACTCAACGGCCGGCTGCGAGCTACTCAGCTTCTTGGATTGTTACTCGGGATATCATCAGATCCGACTAAAAGAATCCGACTACTTGAAGACCTCGTTTATTACACCCTTTGGGGCCTACTGCTACATCACCATGCCCTTTGGATTGAAGAACGCAGGAGCAACCTATCAACGCATGATTCAAAGGAAATTATCTCACTATTTTCAAAGTCACTCGGTCACGGTGGTCACATCGTTTCCACTCGGGGATATACTTCATAATCGCGAAGCAAACGGGCGGATTGCGAAGTGGGCCTTAGAATTGATGTCTTTGGATATATCTTTCAAACCACGAACTTCGATCAAGTCACAAGCTCTAGCTGATTTCCTTGCCGAGTGGACCGAGTGCCAAGAAGACATGCCAGAGGAAAAGATGGAATATTGGACTATGCATTTTGATGGGTCGAAGAGGCTTACAGGCACTGGAGCTGGGGTCGTCTTGATTTCCCCGACTGGAGAAAGATTAAGCTACGTATTGTGGATACATTTTTCTGCGTCCCATAACGTAGCGGAATACGAAGCCCTACTCCATGGACTAAGGATTGCAATATCTCTAGGTATTCGCCGACTAATCGTCCGTGGAGACTCTCAGTTGGGTGTTAATCAAGTCACGAAAGAGTGGTCATGTCTAGATGTTAATATGACCGCTTACCGACAAGAGGTACGTAAGCTGGAAGATAAATTCGACGGACTCGAGCTCACCCATGTCCTCCGACATAATAATGAGGCAGCCGACAGACTGGCCAATTTTGGTTCAAAACTGGAAGCAGCTCCTTCAGATGTGTTCGTCGAACATCTTTACGAACCGACCGTACCCAGAAAGGAGATAACTGAAGCCATGGATACTCAAGGCGTAGGCATGCTTGAAGCCGATTGGAGAGAACCGTTTATAAAGTTTTTGAGCAAACAAGAACTCCCTCAAGACAAAAATGAAGTCGAGCGGATTTCCAGGCGCAGCAGACTTTACATTATTCATGAGACTGAGCTGTACAAGAAAAGTCCATCAGGAATACTGCAGTGCTATGTATCTTTGGAGGAAGGGAAACAATTGTTGAAGGATATACACTCTGGTATTTGTGGTAATCATGCTGCTGCACGGACCATTGTCGGCAAAGCTTACCGGCAAGGTTTTTTTTGGCCTACAGCTGTGTCCGATGTAGATAAGATTGTGCGGACATGCGAAGGTTGTCAATTTTTTGCCAGACAAACTCATTTACCAGCCCAAGAGTTGCAAACCATCCCGTTGTCCTGGCCGTTTGCGATCTGGGGGCTTGACATGGTCGGCCCATTTAAAAGGGCAGTCGGCGGTTACACACATCTCTTCGTGGCTATCGACAAATTCTCCAAATGGATTGAGGCTAAACCGGTTATCACGATCACAGCAGATAAAGCTAGAGATTTTTTCATCAACATTGTGCATCAGTTTGGGGTACCTAATCGGATCATCACTGATAATGGCACTCAATTCACTGGCGGAACATTTAAAGACTTTTGTGAAGACTTCGGCATTAAAATTTGTTATGCCTCCATGGCACACCCCATGAGTAACGGACAAGTTGAGCGCGCTAACAGCATGATACTGCAAGGGATCAAAGCACGAGTTTTCGACCGACTACGCCCCTATGCTGGCAAGTGGGTAGATCAGCTGCCGTCCGTACTTTGGTCTTTACGCACTACTCCTAGTCGGGCTACCGGCCAGTCGCCATTCTTTTTGGTTTATGGCGCAGAAGCAATGTTGCCGAGTGAAGTGGAATTTGAATCACTACGATTTCGGAACTTCAACGAGGAGGGCTATGAAGAGGGCCGAGTAGACGACATCAACCGACTAGAAGAAGCCCGAGAAGCAGCTTTAATTCAATCGACTCGATACCTGCAAGGGTTGCGTCGTTATCATAATCGAAATGTTTGA

More
Protein seq

MPLDDYWPAAVAVAVAGNGMATAPSLTTTTTTLSGLPPRLSMSRPRPDAANHWRSSSPRRLVPARSHPSSMASLSPATTDAEQSANVAATNLPWLDLGHANPFAMMDHYAGVLDELRWSDYFDGAYQAFRFSSLDFITNDFGKISLLDSDSNQSGRNQVPVPFGIPNSAEAYSKIISPKSVSSHSDEIQSIPPRSDQDDGSYPSILMKLPDDLAAVFTAKTSPTRRSRRAPAPAPIQSTSREVGVILQPLGTVSTEELDGYLSSPGVSSRPTEILDYDDFGYHYDHGDFDNFDDSYEDNYTPLFFGVFMADNETEEQRRAREAEQDRARQEAEHRERIAKEAEDRRHRALVSGRRARELIGQQDVDGTAVFRTPQQNVVAAITLLDTLLKEDALNQADHVVNILNQTKTMIATSVPANSASTRTPTGSRVPHHQPSLSITGTGSSRRSRGHDERSVHSLPERHRERRAERPRSPPRQRPVDLRDTINQRRAARGHRHSPNRYDDDVDGVAAFTNDLRRVDWPVGFKPTGIEKYDGTTNLESWLTVYGLAIRAAGGDSKAMANYLPVALADSARSWLHGLPRGMIGSWAKLRDHFIANFQGTFERPGTQFDLYNVIQKSGESLRDYIRRFSEQRNKISDITDDVIIATFTKGIRHEDLVRGSGNNNHKDRKRKPEELVATTSPSSRQRPRVNTFDKIMNSQCPHHPNSNHVAKDCFVYKQFAEQYVKNARKPADGDQGTSKKKDDEDDAPTGFQDHRKELNHIFGGPLAYESKRKQKLTEREINAVQPNTPQYLRWSETAIKFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRTELKPSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENVCFEVADFETAYHAILGRPALAKFMAVPHYTYMMMKMPGPRGVISLRSDIKQAVTCDKESYEMAQTHETTLAREEIRLSATTAGEGEVPATKLTKTEESDAKAKKIPLDPSDPDKTANNKDIFAWKPSDMPGIPREVIEHSLHVKEDAKPIKQRLRRFAQDRKDAIKEELTKLLAAGFIKEVLHPDWLANPVLVRKKTGQWRMCVDYTDLKKSCPKDPFGLHRIDQVVDSTAGCELLSFLDCYSGYHQIRLKESDYLKTSFITPFGAYCYITMPFGLKNAGATYQRMIQRKLSHYFQSHSVTVVTSFPLGDILHNREANGRIAKWALELMSLDISFKPRTSIKSQALADFLAEWTECQEDMPEEKMEYWTMHFDGSKRLTGTGAGVVLISPTGERLSYVLWIHFSASHNVAEYEALLHGLRIAISLGIRRLIVRGDSQLGVNQVTKEWSCLDVNMTAYRQEVRKLEDKFDGLELTHVLRHNNEAADRLANFGSKLEAAPSDVFVEHLYEPTVPRKEITEAMDTQGVGMLEADWREPFIKFLSKQELPQDKNEVERISRRSRLYIIHETELYKKSPSGILQCYVSLEEGKQLLKDIHSGICGNHAAARTIVGKAYRQGFFWPTAVSDVDKIVRTCEGCQFFARQTHLPAQELQTIPLSWPFAIWGLDMVGPFKRAVGGYTHLFVAIDKFSKWIEAKPVITITADKARDFFINIVHQFGVPNRIITDNGTQFTGGTFKDFCEDFGIKICYASMAHPMSNGQVERANSMILQGIKARVFDRLRPYAGKWVDQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFESLRFRNFNEEGYEEGRVDDINRLEEAREAALIQSTRYLQGLRRYHNRNV

Function Transposon Ty3-I Gag-Pol polyprotein [UniProtKB/Swiss-Prot:Q7LHG5]

Transcripts

Gene Transcript Chromosome Start End Strand Source
LOC_Os03g37250 LOC_Os03g37250.1 Chr03 20642169 20649649 - MSU_osa1r7
CDS seq

ATGCCGCTCGACGACTACTGGCCTGCGGCGGTGGCGGTGGCGGTCGCCGGGAACGGGATGGCGACAGCGCCCTCATTGACGACGACGACGACGACGCTCTCGGGCCTACCACCACGCCTGAGCATGAGCAGGCCACGGCCGGATGCGGCGAACCACTGGCGGTCGTCGTCCCCTCGGCGTCTAGTTCCAGCACGCTCACATCCATCATCCATGGCCAGCCTCAGCCCCGCCACGACCGACGCCGAGCAGAGCGCCAATGTCGCTGCGACTAACCTGCCGTGGCTGGACCTAGGACACGCCAACCCCTTCGCGATGATGGACCACTATGCCGGCGTGCTGGACGAGCTCAGGTGGTCTGACTACTTCGACGGCGCATACCAAGCGTTCCGATTCAGCAGCCTCGACTTCATCACCAACGACTTCGGCAAGATCTCTCTCCTTGACTCGGATTCAAACCAGTCGGGGAGAAACCAGGTCCCCGTGCCGTTCGGTATTCCGAACTCGGCCGAGGCCTACTCCAAGATCATCTCTCCTAAGTCGGTTTCAAGCCACTCGGACGAGATCCAATCTATTCCCCCACGATCAGATCAAGACGACGGGTCCTATCCCTCAATCTTGATGAAACTTCCTGATGACTTGGCCGCCGTCTTCACAGCCAAAACATCTCCCACTCGGAGATCTAGGCGAGCTCCGGCACCGGCCCCGATCCAGTCTACATCCAGGGAGGTTGGCGTTATACTCCAACCTCTTGGGACAGTCTCGACGGAAGAGTTGGATGGCTACCTCAGCTCCCCCGGCGTCAGTTCCCGACCAACTGAGATCCTCGACTATGACGACTTCGGCTACCACTACGACCATGGCGACTTCGACAACTTCGACGACAGCTACGAGGATAACTACACGCCCCTCTTCTTCGGCGTATTCATGGCTGACAACGAAACGGAAGAACAGCGCCGAGCCCGAGAAGCAGAACAAGATCGCGCACGGCAAGAAGCTGAACATCGCGAACGGATTGCAAAGGAAGCTGAAGATCGACGGCACCGCGCCTTGGTATCTGGGCGCCGAGCGAGAGAGCTCATTGGGCAACAAGACGTCGACGGGACAGCGGTCTTTCGCACCCCCCAGCAGAACGTGGTTGCAGCAATCACTCTCCTCGACACCCTCCTCAAGGAAGACGCCCTCAACCAAGCCGATCATGTTGTCAACATCTTGAACCAGACGAAGACCATGATCGCTACCTCGGTTCCAGCCAACTCCGCAAGCACCCGCACCCCGACTGGTAGCCGAGTCCCTCATCATCAGCCAAGCCTCAGCATCACCGGCACAGGATCTAGTCGCAGGAGCAGGGGTCACGACGAACGATCTGTTCACTCGCTTCCCGAACGTCACAGGGAGCGCCGAGCTGAACGGCCTCGTTCTCCACCTCGCCAGCGTCCCGTCGACCTTCGTGACACGATCAACCAGCGCCGTGCAGCACGAGGTCACCGTCATTCACCAAATCGCTACGACGACGACGTGGATGGAGTAGCTGCCTTCACTAATGACCTGCGTCGAGTGGATTGGCCAGTCGGCTTCAAACCGACTGGAATCGAGAAGTATGACGGCACCACCAATCTGGAGTCTTGGCTCACCGTCTACGGACTCGCAATCCGCGCAGCAGGTGGAGACAGCAAGGCCATGGCAAACTATCTACCTGTGGCCCTAGCGGACTCCGCCCGATCCTGGCTCCACGGACTACCCCGTGGCATGATCGGATCATGGGCGAAACTTCGTGATCACTTCATCGCCAACTTCCAGGGCACCTTTGAACGCCCCGGCACACAGTTTGATCTCTACAACGTCATTCAGAAGTCTGGAGAATCCCTTCGAGATTACATCCGACGCTTCTCCGAGCAACGCAACAAGATCTCCGACATCACCGACGACGTCATCATCGCCACCTTCACTAAAGGCATTCGCCACGAGGACCTAGTCAGAGGGAGTGGAAATAACAACCACAAGGATCGCAAGCGTAAGCCCGAAGAACTTGTGGCGACCACCTCTCCATCTTCCCGACAACGTCCCCGCGTCAACACCTTCGACAAGATAATGAACTCTCAATGTCCGCATCATCCCAATTCCAACCACGTGGCCAAAGATTGCTTCGTCTACAAACAGTTCGCGGAGCAATACGTCAAGAACGCACGCAAACCTGCAGACGGAGATCAGGGCACATCAAAGAAGAAAGATGATGAAGATGATGCCCCGACTGGTTTTCAAGATCATCGCAAAGAACTTAATCACATCTTCGGCGGACCCCTGGCTTATGAGTCCAAGAGAAAACAGAAGCTAACAGAACGGGAGATCAATGCGGTTCAGCCTAACACGCCCCAGTATCTTCGGTGGTCAGAAACAGCAATTAAGTTCGACCGCTCGGATCATCCCGACCGAGTGGTCCACCCGGGGCGGTACCCCCTGGTACTAGACCCAGTGGTTCGCAATGTCAAGCTCCGACGGACTCTCATCGATGGTGGCAGCGCACTCAACATCCTTTTCGCTAAGACCCTGGACGATATGCAGATTCCTCGCACGGAATTAAAGCCGAGTAATGCACCCTTCCACGGTGTTATCCCAGGATTGTCAGCTACACCACTCGGCCAGATCACTCTTCCAGTTACCTTCGGCACTCGGGAAAATTTTCGCACAGAAAATGTTTGTTTCGAAGTTGCCGATTTCGAGACAGCATATCATGCTATACTTGGACGACCGGCTTTAGCCAAATTTATGGCCGTCCCACACTACACCTACATGATGATGAAGATGCCTGGTCCTCGAGGGGTCATATCACTACGGAGCGACATCAAGCAGGCCGTCACATGCGACAAAGAAAGCTACGAGATGGCCCAAACCCACGAGACTACTCTTGCTCGCGAAGAGATCCGACTGTCTGCAACCACGGCAGGCGAGGGAGAAGTGCCTGCAACCAAGCTGACAAAGACCGAAGAAAGTGATGCCAAGGCGAAAAAGATTCCCCTAGATCCCTCCGATCCTGATAAGACTGCTAATAATAAAGATATTTTTGCGTGGAAACCATCCGATATGCCTGGTATCCCCAGAGAGGTGATTGAGCACTCTTTACATGTTAAGGAAGACGCCAAACCCATCAAGCAACGACTCCGCCGTTTTGCACAAGACAGGAAGGATGCGATCAAGGAGGAATTAACCAAGCTGTTAGCAGCAGGTTTCATAAAGGAAGTCCTTCATCCCGACTGGCTGGCTAACCCAGTCCTGGTTCGGAAAAAGACGGGGCAATGGCGAATGTGTGTCGATTATACCGACCTCAAAAAATCTTGTCCCAAAGACCCTTTTGGGTTACATCGCATTGACCAGGTGGTTGACTCAACGGCCGGCTGCGAGCTACTCAGCTTCTTGGATTGTTACTCGGGATATCATCAGATCCGACTAAAAGAATCCGACTACTTGAAGACCTCGTTTATTACACCCTTTGGGGCCTACTGCTACATCACCATGCCCTTTGGATTGAAGAACGCAGGAGCAACCTATCAACGCATGATTCAAAGGAAATTATCTCACTATTTTCAAAGTCACTCGGTCACGGTGGTCACATCGTTTCCACTCGGGGATATACTTCATAATCGCGAAGCAAACGGGCGGATTGCGAAGTGGGCCTTAGAATTGATGTCTTTGGATATATCTTTCAAACCACGAACTTCGATCAAGTCACAAGCTCTAGCTGATTTCCTTGCCGAGTGGACCGAGTGCCAAGAAGACATGCCAGAGGAAAAGATGGAATATTGGACTATGCATTTTGATGGGTCGAAGAGGCTTACAGGCACTGGAGCTGGGGTCGTCTTGATTTCCCCGACTGGAGAAAGATTAAGCTACGTATTGTGGATACATTTTTCTGCGTCCCATAACGTAGCGGAATACGAAGCCCTACTCCATGGACTAAGGATTGCAATATCTCTAGGTATTCGCCGACTAATCGTCCGTGGAGACTCTCAGTTGGGTGTTAATCAAGTCACGAAAGAGTGGTCATGTCTAGATGTTAATATGACCGCTTACCGACAAGAGGTACGTAAGCTGGAAGATAAATTCGACGGACTCGAGCTCACCCATGTCCTCCGACATAATAATGAGGCAGCCGACAGACTGGCCAATTTTGGTTCAAAACTGGAAGCAGCTCCTTCAGATGTGTTCGTCGAACATCTTTACGAACCGACCGTACCCAGAAAGGAGATAACTGAAGCCATGGATACTCAAGGCGTAGGCATGCTTGAAGCCGATTGGAGAGAACCGTTTATAAAGTTTTTGAGCAAACAAGAACTCCCTCAAGACAAAAATGAAGTCGAGCGGATTTCCAGGCGCAGCAGACTTTACATTATTCATGAGACTGAGCTGTACAAGAAAAGTCCATCAGGAATACTGCAGTGCTATGTATCTTTGGAGGAAGGGAAACAATTGTTGAAGGATATACACTCTGGTATTTGTGGTAATCATGCTGCTGCACGGACCATTGTCGGCAAAGCTTACCGGCAAGGTTTTTTTTGGCCTACAGCTGTGTCCGATGTAGATAAGATTGTGCGGACATGCGAAGGTTGTCAATTTTTTGCCAGACAAACTCATTTACCAGCCCAAGAGTTGCAAACCATCCCGTTGTCCTGGCCGTTTGCGATCTGGGGGCTTGACATGGTCGGCCCATTTAAAAGGGCAGTCGGCGGTTACACACATCTCTTCGTGGCTATCGACAAATTCTCCAAATGGATTGAGGCTAAACCGGTTATCACGATCACAGCAGATAAAGCTAGAGATTTTTTCATCAACATTGTGCATCAGTTTGGGGTACCTAATCGGATCATCACTGATAATGGCACTCAATTCACTGGCGGAACATTTAAAGACTTTTGTGAAGACTTCGGCATTAAAATTTGTTATGCCTCCATGGCACACCCCATGAGTAACGGACAAGTTGAGCGCGCTAACAGCATGATACTGCAAGGGATCAAAGCACGAGTTTTCGACCGACTACGCCCCTATGCTGGCAAGTGGGTAGATCAGCTGCCGTCCGTACTTTGGTCTTTACGCACTACTCCTAGTCGGGCTACCGGCCAGTCGCCATTCTTTTTGGTTTATGGCGCAGAAGCAATGTTGCCGAGTGAAGTGGAATTTGAATCACTACGATTTCGGAACTTCAACGAGGAGGGCTATGAAGAGGGCCGAGTAGACGACATCAACCGACTAGAAGAAGCCCGAGAAGCAGCTTTAATTCAATCGACTCGATACCTGCAAGGGTTGCGTCGTTATCATAATCGAAATGTTTGA

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Protein seq

MPLDDYWPAAVAVAVAGNGMATAPSLTTTTTTLSGLPPRLSMSRPRPDAANHWRSSSPRRLVPARSHPSSMASLSPATTDAEQSANVAATNLPWLDLGHANPFAMMDHYAGVLDELRWSDYFDGAYQAFRFSSLDFITNDFGKISLLDSDSNQSGRNQVPVPFGIPNSAEAYSKIISPKSVSSHSDEIQSIPPRSDQDDGSYPSILMKLPDDLAAVFTAKTSPTRRSRRAPAPAPIQSTSREVGVILQPLGTVSTEELDGYLSSPGVSSRPTEILDYDDFGYHYDHGDFDNFDDSYEDNYTPLFFGVFMADNETEEQRRAREAEQDRARQEAEHRERIAKEAEDRRHRALVSGRRARELIGQQDVDGTAVFRTPQQNVVAAITLLDTLLKEDALNQADHVVNILNQTKTMIATSVPANSASTRTPTGSRVPHHQPSLSITGTGSSRRSRGHDERSVHSLPERHRERRAERPRSPPRQRPVDLRDTINQRRAARGHRHSPNRYDDDVDGVAAFTNDLRRVDWPVGFKPTGIEKYDGTTNLESWLTVYGLAIRAAGGDSKAMANYLPVALADSARSWLHGLPRGMIGSWAKLRDHFIANFQGTFERPGTQFDLYNVIQKSGESLRDYIRRFSEQRNKISDITDDVIIATFTKGIRHEDLVRGSGNNNHKDRKRKPEELVATTSPSSRQRPRVNTFDKIMNSQCPHHPNSNHVAKDCFVYKQFAEQYVKNARKPADGDQGTSKKKDDEDDAPTGFQDHRKELNHIFGGPLAYESKRKQKLTEREINAVQPNTPQYLRWSETAIKFDRSDHPDRVVHPGRYPLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRTELKPSNAPFHGVIPGLSATPLGQITLPVTFGTRENFRTENVCFEVADFETAYHAILGRPALAKFMAVPHYTYMMMKMPGPRGVISLRSDIKQAVTCDKESYEMAQTHETTLAREEIRLSATTAGEGEVPATKLTKTEESDAKAKKIPLDPSDPDKTANNKDIFAWKPSDMPGIPREVIEHSLHVKEDAKPIKQRLRRFAQDRKDAIKEELTKLLAAGFIKEVLHPDWLANPVLVRKKTGQWRMCVDYTDLKKSCPKDPFGLHRIDQVVDSTAGCELLSFLDCYSGYHQIRLKESDYLKTSFITPFGAYCYITMPFGLKNAGATYQRMIQRKLSHYFQSHSVTVVTSFPLGDILHNREANGRIAKWALELMSLDISFKPRTSIKSQALADFLAEWTECQEDMPEEKMEYWTMHFDGSKRLTGTGAGVVLISPTGERLSYVLWIHFSASHNVAEYEALLHGLRIAISLGIRRLIVRGDSQLGVNQVTKEWSCLDVNMTAYRQEVRKLEDKFDGLELTHVLRHNNEAADRLANFGSKLEAAPSDVFVEHLYEPTVPRKEITEAMDTQGVGMLEADWREPFIKFLSKQELPQDKNEVERISRRSRLYIIHETELYKKSPSGILQCYVSLEEGKQLLKDIHSGICGNHAAARTIVGKAYRQGFFWPTAVSDVDKIVRTCEGCQFFARQTHLPAQELQTIPLSWPFAIWGLDMVGPFKRAVGGYTHLFVAIDKFSKWIEAKPVITITADKARDFFINIVHQFGVPNRIITDNGTQFTGGTFKDFCEDFGIKICYASMAHPMSNGQVERANSMILQGIKARVFDRLRPYAGKWVDQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFESLRFRNFNEEGYEEGRVDDINRLEEAREAALIQSTRYLQGLRRYHNRNV

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.030920 0.0 0.0

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) NA NA NA NA NA
Nipponbare | IRGSP 1.0 | MSU LOC_Os01g23280 SBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | RAP-db NA NA NA NA NA
Azucena | AzucenaRS1 | Gramene(+IsoSeq) NA NA NA NA NA
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) NA NA NA NA NA
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) NA NA NA NA NA
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) NA NA NA NA NA
PR 106 | Os127742RS1 | Gramene(+IsoSeq) NA NA NA NA NA
Minghui 63 | MH63RS3 | HZAU OsMH63_03G0354400 RBH 0 0 0
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_03g0038971 SBH 0.041042 0.305829 1.810595
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_03G0356900 RBH 0 0.0340885 0.0536775
LIMA | Os127564RS1 | Gramene(+IsoSeq) NA NA NA NA NA
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) NA NA NA NA NA
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) NA NA NA NA NA
LIU XU | Os125827RS1 | Gramene(+IsoSeq) NA NA NA NA NA
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) NA NA NA NA NA
N22 | OsN22RS2 | Gramene(+IsoSeq) NA NA NA NA NA
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) NA NA NA NA NA
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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