Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
LOC_Os03g35390 OGI:03054560 | 3/16 Nipponbare | IRGSP 1.0 | MSU Chr03:19621265-19627177
Gene Symbol -
DNA seq

CTAGACATAGAAGCGCTTGAGGGAGGCGGCGTTCCAGGAATGGTCGAACTCCTCGCCTTCGAGTGTCGCTAGGCGAAAAGATCCCGTCCTGGACTTGCGCTTGATGAGGTATGGTCCTTCCCACTTTGATTCAAGCTTGCCAACTACTGGGTTCGCCTTCTTCCTTAGGACGAGATGACCAGGTATGTGCTCCGTGGGTCGAACTTTTTTGTTGTAAGTTGCCGAAGTGCTTGTGGCGTACTTGTGCATGTGCTCGAGCGCTTTGACTCTTACTCCTTCCAAGAGTTCGAGCGATAATTCGCTTCCTTCTTCGCCCCCGGAAAACATCACCCTTGGTGACTTAGCCCCTAGCTCTGCTGGGGTCATTGCCTCATCGCCATAAAGAAGCATAAACGGGCTAAACTTGGTTGGTCTTGTGGGGGTCGTCCGAAGAGCCCAGAGAACCGATAGCAATTCCTCTGGCCATTTGCCTTTCGCCGCCCCTTCAAGTCTTTTCTTCAGTGCTTCTAAGATCTTGCCATTTGTACGTTCGGCCGCCCCATTTGACTGCGGGTGTGCGACCGACGCGAAATTGATTTCCAGGTTAAGCCCTTCGCACATTTCTCTGAACTTAACAAAGTCAAACTGCTTGCCGTTGTCAGTAATGAACTCCTTTGGCACTCCGAAACGGCAAACAATGTTTTTCCATACAAATTTCTGTACTGCTGCCGAAGTGATTGCCCCTAGGGGTTCGGCTTCAATCCATCGAGAGAAATATTCCACAGCTACAATTGCGAATTTATACCCATTTCGCGCTACTGGGAACGGCCCAATGATGTCCAGTCCCCATCTGGCGAAGGGCCATATTGGTGCAATGGGCTGCAGATCATACTGGGGCGCGGCTTGGCTTCGGCTATGACGCTGGCTACTTTCGCACTTCTTGATTTGCTCAACACAGACTTTCAACACAGTGGGCCAATAAACTCCTTGTCTAAATACTTTGGAGGCCACTGTTCTTGCAGCCTGGTGCGCGCCGCATAGCCCCTGGTGTATCTCTTTTGCCATTTCTTCGCCGTCGGCAAATGAGATACAACGAAGTAAGGGTTGAAGTACCCCTGTGCGGTAAAGCTGACCCGAAACCATCTTATATTTCGTGGCTCTGAGCTGCAAACGCTTCGCTTCTGCTTCGTCTACCGGAAGCCAGCCTGTTTCAAGGTGTTTCACAAATGGGGTTCGCCAGTCATGTGGGTCTTCGCCCCGTTTCTCCCGGTCGATTGCCATGACTTCGGAGCAGTCCATGGGCACACTTGGAGCATGCAGGACTTCGAAAAAGATGCCCGGCGAATGTGGGCCACCACAAGCAGCGGATTTCGCCAAGGCGTCTGCCTCCTCGTTCTGGTCTCTAGGCAAGTGTTTGACCGTTATGCCGGTGAAGCATTTTTCCATGGACCGAACAGCCTCCAGATACTTCTTCATGCCCTCTTCTTTTGCCTCGAAGGATTTGTCAACATGACCTGCTACCAACTTGGAGTCAGTTCGAATTAGCAGGCGTCGGACTCCCAGTGCTTTCGCCTTTCTTAGGCCCAGGAGAACGGCTTCGTATTCTGCTACATTGTTGGTTGTGTCGAACTGTAATCTCGCTGCGTACCGAATTGGCACACCATTCGGCGAAAAGAGGACTGTCGCAACGCCTGCCCCCTTGTGCGACCACGAACCGTCAGAGCACATCACCCAGAACTGTTCGGCCGGCTCGGGGTCGGGGGCAAGTATTGGAGTCCATTCAGCTACGAAGTCAGCTAGCACTTGAGACTTGATAGCAGAGTGTGCAACAAAATACAAGTCGAACGGAGATAGCTCTGCCGCCCACTTGCTGAGCCGGCCAGTGACTTCCTTGCCTCGGAGTATTTCGCCCAAGGGGTACTGTGATGGCACTATGACTTTGTTGGCCTGGAAGTAGTGCTTAAGCTTGCGCGAAGCCATCACTAGAGCGTAAGCGAGCTTTTCCATTTCAATGTACCTTGTCTTCGCTCCTTGTAGTGCTTCGGAGACGAAGTAGACCGGTTTCTGTCCGGACTCTGTTTCTTGGACGAGTGCTGCACTGATTGCCACCGGCGAAGCTGCCAAGTATAATAGCAGTTCGCTTCCTGGGGGTGGGCTTATCAGAGCTGGCGGACTTTGCAAGTATTGCTTTAGCTCGTCGAATGCTGCTTGGCACTCTGGTGTCCAATTAAACTTTCCCGCGCCCCGGAGGGTCTTGAAGAAGGGCAAACCTCTTTCGGCCGCCTTTGAGAGGAATCGACTGAGTGCTGCAATTCGGCCTGCGAGCTTTTGTACTTCATGTACGCTTGACGGAGGCTTCATTTGCTGGATGGCATCGATTTTCTCGGGATTCGCCTCGATGCCTCTTTCGGAAACAAGGAAACCCAACAACTTGCCTGCGCGGACGCCGAAAACGCACTTCTCTGGATTCAGCTTTATGCCTGCCGCGCGCAAGTTGTGGAACGTCTCTTGCAGGTCGATCGCATGGTCGAAAGCCTTGCGGCTTTTTACGACGATGTCGTCGACGTAAGCTTCCACGTTTCACCCCAACTGCTTGCCAAGGACCTTGTACACCAGCCTAGCGAAGGTTGCTCCTGCGTTCCTTAAGCCGAAAGGCATCCTGAGGTGACAAAATGTGCCGAATGGAGTGATGAAGGATGTTTTGGGGATGTCGAGCGGGTTCATGTGGATCTGGTGGTAACCGGAATATGCATCCAGGAAACTCATGAGCTCGCATCCAGCTGTTGAATCCACGAGCTGGTCGATTCGTGGCAAGGGGAAATCGTCTTTCGGACATGCCTTGTTCAGGTCTGTGAAATCGACACACGTGCGCCATTTGCCATTTGACTTCCGCACCAGCACTGGATTCGCCAACCACTCCAGATGGTCAATCTCTTGAATAACCCCCGGCCGGAGTAATTTTTGTACTTCGGTCTTCGCCGCTTCTTGGCGATCGGCAGACATCTTGCGCAACTTTTGTTTTCTTGGCCTAATATTCGGCTTGACTGCCAAGTGATGCATGATGAGATCTGCCGGGATGCCCCCCACCTCGTCAGGGCTCCAGGGGAAGATATCGATGTTCTTTTTGAGCACCTCTAGTATGCTCTCAACTTCTTCTTCGCCCATGTCGCCCCCCAGTGATACGAGCTTTGTGGGGTCGGCATCATCAATCTGCACTTTTGTTACCTTGCCATGAGGGGTGGGCTTCGGCGTGTGCTTCGGCCGCTCATGCGGTTCGGTCTCAACATTGTGCACTGCTCTGTTGATTATGGCTAGATCGCATTTTGAAGCGGCCGAAGGCTGAAGCCCCTTGACTACTATCACCCCGGTTGGGCCAGGCATCTTGAGCTTGAGATAATTGTGGTGGGAAATGTCTTCGAACTTGTTCAAGGTTGCACGGCCGAAGATAGCGTTGTAGTTGTATGGGATGTTGACGACGTCGAACAGTATTTGCTCTTCGCTCCTGTTTTCTCCTGAGCCGAAAGCTATCAGCAAAAGTGCTTGGCCAAGAACTTGCACTGCCTCTCCGCCGAACCCCCGGAGCGACGCTGGTGCCAGTGTAAGAGCTTGGGTTGGCAAGCCCATCTTAGCATATGCTTCGGCGAAGATCACGTCGGCCGAACTCCCTCCATCGACCAGGATTCGTCGGACTTCAAAACCGGCTATCTCAGCTGAGATTACCAGTGGATCTTGATGCGGGAACAGGACTCCTTTGGTGTCTTCTGGCCCGAAAGAGATCAGCTGGTTCACGTACTGCGGTGCCCCCTCACCCGCCGAAGTGATGCTGCGGACCATGCGGATCTGCATCTTCCTTTACCGTTTCGACAACTGGCTTGGCGGGTCAGCTCTTGTAATCACTTAGATTACCCTTCGTTGTGTATCTTGGCGTTGTTCGGCTGGGGGTGTTTGCTCCTGAACTGCTTCACGGGGTGCTTCGACAGTTGTTCCCTGCTGCGGCCTTGGGTCTTGCGCGTTGCCACGTTGCCTAATGTTTCGGCATTGCTCCGTGGTGTGCGAAGAGCGTCCGTGAAAGGCGCAGTAGAGGTCTTTTCGGACCTTCTTGCGGGCTGGCTGCTGATGGTTGCTTGCTTGCTGGGCGTCGAACTCCTTGCGGAGGGCTTGCACTTCTTCGACAGCCATCACAGCCTTGCCCGCCCGATCTGTTCTGAACTTTCTCCAAGTCATGGGGGCTTGCCCTTGCCTTGGCGGCTGTCCCTGGATCGCCGGCTGAGACTGGCGAATAGAGAGGGGAGGTGGTTCGGCAATTTGAACTTGCGCTTGAGCTTGAGCAGCGGCGACGGAGGCTTTATCGTACTCAGCTTGTATAGCTTGTCGTTGCTTAGAATCCTCCTCACCCCTTGCGAACCCGTCAATGATGCGAAGTAGGTGCTCGAGCGTCTGCGGCTCCTTGTTGGCGATTTTTCTTGTTAGTTCGCCCTCAAGCAGACCGGCCGAAGCGGCGTTTATAACTGACGCCTCGGTTATGTCTTGAACTTGGCACCGGGCTTGCGAGAAGCGACGCATGTACTCCCTTATCGACTCCCCCAGCCTTTGGCGAATGCCAAGAAGGTGTTGCTGCGTCTTCGGCTCCTCATAGGTGCCTCGAAAGTTAAGGACAAAAACGTCGCGCAATTGCTCCCATGATTAAATGCTATTGGCTGGTAAATTGAAATACCAAGAACGGGCGATGCCGTCTAGAGCGAGATGTATTACCTTCGCCTTGGTATTTTCGTCACCATGAGCCGCTTCAATCGCTGACTCGTAGATGGAGAGGAACTCCTTCGGGTCAGTTTCGCCCGAATAACGCGGGACAGGTGGGAACTTGAACTGGGGTGGGATTGGACGAGTCTTGATTCCTCCACTCAGTGGCAGCCCCTTTTTGCCTCCCGCCCTGTTTACCGCACCTTGCTGCGGGTACGGTGTGGCAAAGGGCGAAATCGCTGCTTGTGCGTGGAGTTGGGCCGTGGCATTCGACTGCCCGGCTCCAACTGGTGGTACTTGCTGGGCCGCCATGGATGGGTCAAAGATTGGCTGCGACCACATCATGGCAGCTCGGATTGGTGCTTGGTTTGTTCCGAAGCCTGGGGTTGGAACTTGCTGCCGAACGGTTGGCACCTGAGCAGTGTTGACGAAGTCGAACTGCGGTCCTTGACTCCACGGCGAAGGTCCCGAGCCTGGCTGAATTGGTGGCAACCAATTGGGCGCACCTTGACTTGTATTCCCCACCGGGTGAGCCGATGGGGTTGTGCTTGAAATGTAGTGGGGTTGGTTGAGTTGCTGAAGGAAAGCTTGGAGTTGCGCCTGCAGAGCCGAAGCCCCTTCCGCCACTGATTGTGGCGCTTGGCCAGGTGGTTGATGCTGCCCGGTGAAGTACACCGGCGGCTGTGCGGCTAGTGGCGGAGAGGGCTGGGTCACCACTTGTGGCCGGACTTGAGGTTGGGCATAGCCTGCCGGATACTGAAGGATTGGAGCCGACGTGGCCTTGGTCCGCCTTGTCGCCTCGTATGCTTGTTGTTGTTCTTGCATTTGGCGGAGCATGTCTTGGAGCCGTGTCATGTTCTGCCGCATGGCTTCCATGTCGGCTTCGGCTTGTGCTTCAGGGTCCAGGCTGATTTGGGCCTGTACAACGGTGAGCGCAGTTGGCACCGCCGGCTGCGACGGGGCGGCTTGAGGCACCACCAGTTGGTTAGTCGAAAGGATCTCCGCCCTGGTCTGGAGTGCCCTTGCCGCCGCAGCCGCCATCACCACGTCGGCCATGTTCAGCACTTGTACTGAGGTTGCGGGGGCCGAAGACGGTTGTGGTGGCGCGGGGGCCGAAGGCGGCTGTGATGGCACTTGTGCTTCTCTATCTTCGGCCACGGACGCCGAAGGCTCTGCTCCTTCCTCGGCGGCCAT

More
CDS seq

ATGGCCGCCGAGGAAGGAGCAGAGCCTTCGGCGTCCGTGGCCGAAGATAGAGAAGCACAAGTGCCATCACAGCCGCCTTCGGCCCCCGCGCCACCACAACCGTCTTCGGCCCCCGCAACCTCAGTACAAGTGCTGAACATGGCCGACGTGGTGATGGCGGCTGCGGCGGCAAGGGCACTCCAGACCAGGGCGGAGATCCTTTCGACTAACCAACTGGTGGTGCCTCAAGCCGCCCCGTCGCAGCCGGCGGTGCCAACTGCGCTCACCGTTGTACAGGCCCAAATCAGCCTGGACCCTGAAGCACAAGCCGAAGCCGACATGGAAGCCATGCGGCAGAACATGACACGGCTCCAAGACATGCTCCGCCAAATGCAAGAACAACAACAAGCATACGAGGCGACAAGGCGGACCAAGGCCACGTCGGCTCCAATCCTTCAGTATCCGGCAGGCTATGCCCAACCTCAAGTCCGGCCACAAGTGGTGACCCAGCCCTCTCCGCCACTAGCCGCACAGCCGCCGGTGTACTTCACCGGGCAGCATCAACCACCTGGCCAAGCGCCACAATCAGTGGCGGAAGGGGCTTCGGCTCTGCAGGCGCAACTCCAAGCTTTCCTTCAGCAACTCAACCAACCCCACTACATTTCAAGCACAACCCCATCGGCTCACCCGGTGGGGAATACAAGTCAAGGTGCGCCCAATTGGTTGCCACCAATTCAGCCAGGCTCGGGACCTTCGCCGTGGAGTCAAGGACCGCAGTTCGACTTCGTCAACACTGCTCAGGTGCCAACCGTTCGGCAGCAAGTTCCAACCCCAGGCTTCGGAACAAACCAAGCACCAATCCGAGCTGCCATGATGTGGTCGCAGCCAATCTTTGACCCATCCATGGCGGCCCAGCAAGTACCACCAGTTGGAGCCGGGCAGTCGAATGCCACGGCCCAACTCCACGCACAAGCAGCGATTTCGCCCTTTGCCACACCGTACCCGCAGCAAGGTGCGGTAAACAGGGCGGGAGGCAAAAAGGGGCTGCCACTGAGTGGAGGAATCAAGACTCGTCCAATCCCACCCCAGTTCAAGTTCCCACCTGTCCCGCGTTATTCGGGCGAAACTGACCCGAAGGAGTTCCTCTCCATCTACGAGTCAGCGATTGAAGCGGCTCATGGTGACGAAAATACCAAGGCGAAGCAATTGCGCGACGTTTTTGTCCTTAACTTTCGAGGCACCTATGAGGAGCCGAAGACGCAGCAACACCTTCTTGGCATTCGCCAAAGGCTGGGGGAGTCGATAAGGGAGTACATGCGTCGCTTCTCGCAAGCCCGGTGCCAAGTTCAAGACATAACCGAGGCGTCAGTTATAAACGCCGCTTCGGCCGGTCTGCTTGAGGGCGAACTAACAAGAAAAATCGCCAACAAGGAGCCGCAGACGCTCGAGCACCTACTTCGCATCATTGACGGGTTCGCAAGGGGTGAGGAGGATTCTAAGCAACGACAAGCTATACAAGCTGAGTACGATAAAGCCTCCGTCGCCGCTGCTCAAGCTCAAGCGCAAGTTCAAATTGCCGAACCACCTCCCCTCTCTATTCGCCAGTCTCAGCCGGCGATCCAGGGACAGCCGCCAAGGCAAGGGCAAGCCCCCATGACTTGGAGAAAGTTCAGAACAGATCGGGCGGGCAAGGCTGTGATGGCTGTCGAAGAAGTGCAAGCCCTCCGCAAGGAGTTCGACGCCCAGCAAGCAAGCAACCATCAGCAGCCAGCCCGCAAGAAGGTCCGAAAAGACCTCTACTGCGCCTTTCACGGACGCTCTTCGCACACCACGGAGCAATGCCGAAACATTAGGCAACGTGGCAACGCGCAAGACCCAAGGCCGCAGCAGGGAACAACTGTCGAAGCACCCCGTGAAGCAGTTCAGGAGCAAACACCCCCAGCCGAACAACGCCAAGATACACAACGAAGGATCCGCATGGTCCGCAGCATCACTTCGGCGGGTGAGGGGGCACCGCAGTACGTGAACCAGCTGATCTCTTTCGGGCCAGAAGACACCAAAGGAGTCCTGTTCCCGCATCAAGATCCACTGGTAATCTCAGCTGAGATAGCCGGTTTTGAAGTCCGACGAATCCTGGTCGATGGAGGGAGTTCGGCCGACGTGATCTTCGCCGAAGCATATGCTAAGATGGGCTTGCCAACCCAAGCTCTTACACTGGCACCAGCGTCGCTCCGGGGGTTCGGCGGAGAGGCAGTGCAAGTTCTTGGCCAAGCACTTTTGCTGATAGCTTTCGGCTCAGGAGAAAACAGGAGCGAAGAGCAAATACTGTTCGACGTCGTCAACATCCCATACAACTACAACGCTATCTTCGGCCGTGCAACCTTGAACAAGTTCGAAGACATTTCCCACCACAATTATCTCAAGCTCAAGATGCCTGGCCCAACCGGGGTGATAGTAGTCAAGGGGCTTCAGCCTTCGGCCGCTTCAAAATGCGATCTAGCCATAATCAACAGAGCAGTGCACAATGTTGAGACCGAACCGCATGAGCGGCCGAAGCACACGCCGAAGCCCACCCCTCATGGCAAGGTAACAAAAGTGCAGATTGATGATGCCGACCCCACAAAGCTCGTATCACTGGGGGGCGACATGGGCGAAGAAGAAGTTGAGAGCATACTAGAGGTGCTCAAAAAGAACATCGATATCTTCCCCTGGAGCCCTGACGAGGTGGGGGGCATCCCGGCAGATCTCATCATGCATCACTTGGCAGTCAAGCCGAATATTAGGCCAAGAAAACAAAAGTTGCGCAAGATGTCTGCCGATCGCCAAGAAGCGGCGAAGACCGAAGTACAAAAATTACTCCGGCCGGGGGTTATTCAAGAGATTGACCATCTGGAGTGGTTGGCGAATCCAGTGCTGGTGCGGAAGTCAAATGGCAAATGGCGCACGTGTGTCGATTTCACAGACCTGAACAAGGCATGTCCGAAAGACGATTTCCCCTTGCCACGAATCGACCAGCTCGTGGATTCAACAGCTGGATGCGAGCTCATGAGTTTCCTGGATGCATATTCCGGTTACCACCAGATCCACATGAACCCGCTCGACATCCCCAAAACATCCTTCATCACTCCATTCGGCACATTTTGTCACCTCAGGATGCCTTTCGGCTTAAGGAACGCAGGAGCAACCTTCGCTAGGCTGGTGTACAAGGTCCTTGGCAAGCAGTTGGGCCGCAAGGCTTTCGACCATGCGATCGACCTGCAAGAGACGTTCCACAACTTGCGCGCGGCAGGCATAAAGCTGAATCCAGAGAAGTGCGTTTTCGGCGTCCGCGCAGGCAAGTTGTTGGGTTTCCTTGTTTCCGAAAGAGGCATCGAGGCGAATCCCGAGAAAATCGATGCCATCCAGCAAATGAAGCCTCCGTCAAGCGTACATGAAGTACAAAAGCTCGCAGGCCGAATTGCAGCACTCAGTCGATTCCTCTCAAAGGCGGCCGAAAGAGGTTTGCCCTTCTTCAAGACCCTCCGGGGCGCGGGAAAGTTTAATTGGACACCAGAGTGCCAAGCAGCATTCGACGAGCTAAAGCAATACTTGCAAAGTCCGCCAGCTCTGATAAGCCCACCCCCAGGAAGCGAACTGCTATTATACTTGGCAGCTTCGCCGGTGGCAATCAGTGCAGCACTCGTCCAAGAAACAGAGTCCGGACAGAAACCGGTCTACTTCGTCTCCGAAGCACTACAAGGAGCGAAGACAAGGTACATTGAAATGGAAAAGCTCGCTTACGCTCTAGTGATGGCTTCGCGCAAGCTTAAGCACTACTTCCAGGCCAACAAAGTCATAGTGCCATCACAGTACCCCTTGGGCGAAATACTCCGAGGCAAGGAAGTCACTGGCCGGCTCAGCAAGTGGGCGGCAGAGCTATCTCCGTTCGACTTGTATTTTGTTGCACACTCTGCTATCAAGTCTCAAGTGCTAGCTGACTTCGTAGCTGAATGGACTCCAATACTTGCCCCCGACCCCGAGCCGGCCGAACAGTTCTGGGTGATGTGCTCTGACGGTTCGTGGTCGCACAAGGGGGCAGGCGTTGCGACAGTCCTCTTTTCGCCGAATGGTGTGCCAATTCGGTACGCAGCGAGATTACAGTTCGACACAACCAACAATGTAGCAGAATACGAAGCCGTTCTCCTGGGCCTAAGAAAGGCGAAAGCACTGGGAGTCCGACGCCTGCTAATTCGAACTGACTCCAAGTTGGTAGCAGGTCATGTTGACAAATCCTTCGAGGCAAAAGAAGAGGGCATGAAGAAGTATCTGGAGGCTGTTCGGTCCATGGAAAAATGCTTCACCGGCATAACGGTCAAACACTTGCCTAGAGACCAGAACGAGGAGGCAGACGCCTTGGCGAAATCCGCTGCTTGTGGTGGCCCACATTCGCCGGGCATCTTTTTCGAAGTCCTGCATGCTCCAAGTGTGCCCATGGACTGCTCCGAAGTCATGGCAATCGACCGGGAGAAACGGGGCGAAGACCCACATGACTGGCGAACCCCATTTGTGAAACACCTTGAAACAGGCTGGCTTCCGGTAGACGAAGCAGAAGCGAAGCGTTTGCAGCTCAGAGCCACGAAATATAAGATGGTTTCGGGTCAGCTTTACCGCACAGGGGTACTTCAACCCTTACTTCGTTGTATCTCATTTGCCGACGGCGAAGAAATGGCAAAAGAGATACACCAGGGGCTATGCGGCGCGCACCAGGCTGCAAGAACAGTGGCCTCCAAAGTATTTAGACAAGGAGTTTATTGGCCCACTGTGTTGAAAGTCTGTGTTGAGCAAATCAAGAAGTGCGAAAGTAGCCAGCGTCATAGCCGAAGCCAAGCCGCGCCCCAGTATGATCTGCAGCCCATTGCACCAATATGGCCCTTCGCCAGATGGGGACTGGACATCATTGGGCCGTTCCCAGTAGCGCGAAATGGGTATAAATTCGCAATTGTAGCTGTGGAATATTTCTCTCGATGGATTGAAGCCGAACCCCTAGGGGCAATCACTTCGGCAGCAGTACAGAAATTTGTATGGAAAAACATTGTTTGCCGTTTCGGAGTGCCAAAGGAGTTCATTACTGACAACGGCAAGCAGTTTGACTTTGTTAAGTTCAGAGAAATGTGCGAAGGGCTTAACCTGGAAATCAATTTCGCGTCGGTCGCACACCCGCAGTCAAATGGGGCGGCCGAACGTACAAATGGCAAGATCTTAGAAGCACTGAAGAAAAGACTTGAAGGGGCGGCGAAAGGCAAATGGCCAGAGGAATTGCTATCGGTTCTCTGGGCTCTTCGGACGACCCCCACAAGACCAACCAAGTTTAGCCCGTTTATGCTTCTTTATGGCGATGAGGCAATGACCCCAGCAGAGCTAGGGGCTAAGTCACCAAGGGTGATGTTTTCCGGGGGCGAAGAAGGAAGCGAATTATCGCTCGAACTCTTGGAAGGAGTAAGAGTCAAAGCGCTCGAGCACATGCACAAGTACGCCACAAGCACTTCGGCAACTTACAACAAAAAAGTTCGACCCACGGAGCACATACCTGGTCATCTCGTCCTAAGGAAGAAGGCGAACCCAGTAGTTGGCAAGCTTGAATCAAAGTGGGAAGGACCATACCTCATCAAGCGCAAGTCCAGGACGGGATCTTTTCGCCTAGCGACACTCGAAGGCGAGGAGTTCGACCATTCCTGGAACGCCGCCTCCCTCAAGCGCTTCTATGTCTAG

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Protein seq

MAAEEGAEPSASVAEDREAQVPSQPPSAPAPPQPSSAPATSVQVLNMADVVMAAAAARALQTRAEILSTNQLVVPQAAPSQPAVPTALTVVQAQISLDPEAQAEADMEAMRQNMTRLQDMLRQMQEQQQAYEATRRTKATSAPILQYPAGYAQPQVRPQVVTQPSPPLAAQPPVYFTGQHQPPGQAPQSVAEGASALQAQLQAFLQQLNQPHYISSTTPSAHPVGNTSQGAPNWLPPIQPGSGPSPWSQGPQFDFVNTAQVPTVRQQVPTPGFGTNQAPIRAAMMWSQPIFDPSMAAQQVPPVGAGQSNATAQLHAQAAISPFATPYPQQGAVNRAGGKKGLPLSGGIKTRPIPPQFKFPPVPRYSGETDPKEFLSIYESAIEAAHGDENTKAKQLRDVFVLNFRGTYEEPKTQQHLLGIRQRLGESIREYMRRFSQARCQVQDITEASVINAASAGLLEGELTRKIANKEPQTLEHLLRIIDGFARGEEDSKQRQAIQAEYDKASVAAAQAQAQVQIAEPPPLSIRQSQPAIQGQPPRQGQAPMTWRKFRTDRAGKAVMAVEEVQALRKEFDAQQASNHQQPARKKVRKDLYCAFHGRSSHTTEQCRNIRQRGNAQDPRPQQGTTVEAPREAVQEQTPPAEQRQDTQRRIRMVRSITSAGEGAPQYVNQLISFGPEDTKGVLFPHQDPLVISAEIAGFEVRRILVDGGSSADVIFAEAYAKMGLPTQALTLAPASLRGFGGEAVQVLGQALLLIAFGSGENRSEEQILFDVVNIPYNYNAIFGRATLNKFEDISHHNYLKLKMPGPTGVIVVKGLQPSAASKCDLAIINRAVHNVETEPHERPKHTPKPTPHGKVTKVQIDDADPTKLVSLGGDMGEEEVESILEVLKKNIDIFPWSPDEVGGIPADLIMHHLAVKPNIRPRKQKLRKMSADRQEAAKTEVQKLLRPGVIQEIDHLEWLANPVLVRKSNGKWRTCVDFTDLNKACPKDDFPLPRIDQLVDSTAGCELMSFLDAYSGYHQIHMNPLDIPKTSFITPFGTFCHLRMPFGLRNAGATFARLVYKVLGKQLGRKAFDHAIDLQETFHNLRAAGIKLNPEKCVFGVRAGKLLGFLVSERGIEANPEKIDAIQQMKPPSSVHEVQKLAGRIAALSRFLSKAAERGLPFFKTLRGAGKFNWTPECQAAFDELKQYLQSPPALISPPPGSELLLYLAASPVAISAALVQETESGQKPVYFVSEALQGAKTRYIEMEKLAYALVMASRKLKHYFQANKVIVPSQYPLGEILRGKEVTGRLSKWAAELSPFDLYFVAHSAIKSQVLADFVAEWTPILAPDPEPAEQFWVMCSDGSWSHKGAGVATVLFSPNGVPIRYAARLQFDTTNNVAEYEAVLLGLRKAKALGVRRLLIRTDSKLVAGHVDKSFEAKEEGMKKYLEAVRSMEKCFTGITVKHLPRDQNEEADALAKSAACGGPHSPGIFFEVLHAPSVPMDCSEVMAIDREKRGEDPHDWRTPFVKHLETGWLPVDEAEAKRLQLRATKYKMVSGQLYRTGVLQPLLRCISFADGEEMAKEIHQGLCGAHQAARTVASKVFRQGVYWPTVLKVCVEQIKKCESSQRHSRSQAAPQYDLQPIAPIWPFARWGLDIIGPFPVARNGYKFAIVAVEYFSRWIEAEPLGAITSAAVQKFVWKNIVCRFGVPKEFITDNGKQFDFVKFREMCEGLNLEINFASVAHPQSNGAAERTNGKILEALKKRLEGAAKGKWPEELLSVLWALRTTPTRPTKFSPFMLLYGDEAMTPAELGAKSPRVMFSGGEEGSELSLELLEGVRVKALEHMHKYATSTSATYNKKVRPTEHIPGHLVLRKKANPVVGKLESKWEGPYLIKRKSRTGSFRLATLEGEEFDHSWNAASLKRFYV

Function Retrovirus-related Pol polyprotein from transposon 17.6 [UniProtKB/Swiss-Prot:P04323]

Transcripts

Gene Transcript Chromosome Start End Strand Source
LOC_Os03g35390 LOC_Os03g35390.1 Chr03 19621265 19627177 - MSU_osa1r7
CDS seq

ATGGCCGCCGAGGAAGGAGCAGAGCCTTCGGCGTCCGTGGCCGAAGATAGAGAAGCACAAGTGCCATCACAGCCGCCTTCGGCCCCCGCGCCACCACAACCGTCTTCGGCCCCCGCAACCTCAGTACAAGTGCTGAACATGGCCGACGTGGTGATGGCGGCTGCGGCGGCAAGGGCACTCCAGACCAGGGCGGAGATCCTTTCGACTAACCAACTGGTGGTGCCTCAAGCCGCCCCGTCGCAGCCGGCGGTGCCAACTGCGCTCACCGTTGTACAGGCCCAAATCAGCCTGGACCCTGAAGCACAAGCCGAAGCCGACATGGAAGCCATGCGGCAGAACATGACACGGCTCCAAGACATGCTCCGCCAAATGCAAGAACAACAACAAGCATACGAGGCGACAAGGCGGACCAAGGCCACGTCGGCTCCAATCCTTCAGTATCCGGCAGGCTATGCCCAACCTCAAGTCCGGCCACAAGTGGTGACCCAGCCCTCTCCGCCACTAGCCGCACAGCCGCCGGTGTACTTCACCGGGCAGCATCAACCACCTGGCCAAGCGCCACAATCAGTGGCGGAAGGGGCTTCGGCTCTGCAGGCGCAACTCCAAGCTTTCCTTCAGCAACTCAACCAACCCCACTACATTTCAAGCACAACCCCATCGGCTCACCCGGTGGGGAATACAAGTCAAGGTGCGCCCAATTGGTTGCCACCAATTCAGCCAGGCTCGGGACCTTCGCCGTGGAGTCAAGGACCGCAGTTCGACTTCGTCAACACTGCTCAGGTGCCAACCGTTCGGCAGCAAGTTCCAACCCCAGGCTTCGGAACAAACCAAGCACCAATCCGAGCTGCCATGATGTGGTCGCAGCCAATCTTTGACCCATCCATGGCGGCCCAGCAAGTACCACCAGTTGGAGCCGGGCAGTCGAATGCCACGGCCCAACTCCACGCACAAGCAGCGATTTCGCCCTTTGCCACACCGTACCCGCAGCAAGGTGCGGTAAACAGGGCGGGAGGCAAAAAGGGGCTGCCACTGAGTGGAGGAATCAAGACTCGTCCAATCCCACCCCAGTTCAAGTTCCCACCTGTCCCGCGTTATTCGGGCGAAACTGACCCGAAGGAGTTCCTCTCCATCTACGAGTCAGCGATTGAAGCGGCTCATGGTGACGAAAATACCAAGGCGAAGCAATTGCGCGACGTTTTTGTCCTTAACTTTCGAGGCACCTATGAGGAGCCGAAGACGCAGCAACACCTTCTTGGCATTCGCCAAAGGCTGGGGGAGTCGATAAGGGAGTACATGCGTCGCTTCTCGCAAGCCCGGTGCCAAGTTCAAGACATAACCGAGGCGTCAGTTATAAACGCCGCTTCGGCCGGTCTGCTTGAGGGCGAACTAACAAGAAAAATCGCCAACAAGGAGCCGCAGACGCTCGAGCACCTACTTCGCATCATTGACGGGTTCGCAAGGGGTGAGGAGGATTCTAAGCAACGACAAGCTATACAAGCTGAGTACGATAAAGCCTCCGTCGCCGCTGCTCAAGCTCAAGCGCAAGTTCAAATTGCCGAACCACCTCCCCTCTCTATTCGCCAGTCTCAGCCGGCGATCCAGGGACAGCCGCCAAGGCAAGGGCAAGCCCCCATGACTTGGAGAAAGTTCAGAACAGATCGGGCGGGCAAGGCTGTGATGGCTGTCGAAGAAGTGCAAGCCCTCCGCAAGGAGTTCGACGCCCAGCAAGCAAGCAACCATCAGCAGCCAGCCCGCAAGAAGGTCCGAAAAGACCTCTACTGCGCCTTTCACGGACGCTCTTCGCACACCACGGAGCAATGCCGAAACATTAGGCAACGTGGCAACGCGCAAGACCCAAGGCCGCAGCAGGGAACAACTGTCGAAGCACCCCGTGAAGCAGTTCAGGAGCAAACACCCCCAGCCGAACAACGCCAAGATACACAACGAAGGATCCGCATGGTCCGCAGCATCACTTCGGCGGGTGAGGGGGCACCGCAGTACGTGAACCAGCTGATCTCTTTCGGGCCAGAAGACACCAAAGGAGTCCTGTTCCCGCATCAAGATCCACTGGTAATCTCAGCTGAGATAGCCGGTTTTGAAGTCCGACGAATCCTGGTCGATGGAGGGAGTTCGGCCGACGTGATCTTCGCCGAAGCATATGCTAAGATGGGCTTGCCAACCCAAGCTCTTACACTGGCACCAGCGTCGCTCCGGGGGTTCGGCGGAGAGGCAGTGCAAGTTCTTGGCCAAGCACTTTTGCTGATAGCTTTCGGCTCAGGAGAAAACAGGAGCGAAGAGCAAATACTGTTCGACGTCGTCAACATCCCATACAACTACAACGCTATCTTCGGCCGTGCAACCTTGAACAAGTTCGAAGACATTTCCCACCACAATTATCTCAAGCTCAAGATGCCTGGCCCAACCGGGGTGATAGTAGTCAAGGGGCTTCAGCCTTCGGCCGCTTCAAAATGCGATCTAGCCATAATCAACAGAGCAGTGCACAATGTTGAGACCGAACCGCATGAGCGGCCGAAGCACACGCCGAAGCCCACCCCTCATGGCAAGGTAACAAAAGTGCAGATTGATGATGCCGACCCCACAAAGCTCGTATCACTGGGGGGCGACATGGGCGAAGAAGAAGTTGAGAGCATACTAGAGGTGCTCAAAAAGAACATCGATATCTTCCCCTGGAGCCCTGACGAGGTGGGGGGCATCCCGGCAGATCTCATCATGCATCACTTGGCAGTCAAGCCGAATATTAGGCCAAGAAAACAAAAGTTGCGCAAGATGTCTGCCGATCGCCAAGAAGCGGCGAAGACCGAAGTACAAAAATTACTCCGGCCGGGGGTTATTCAAGAGATTGACCATCTGGAGTGGTTGGCGAATCCAGTGCTGGTGCGGAAGTCAAATGGCAAATGGCGCACGTGTGTCGATTTCACAGACCTGAACAAGGCATGTCCGAAAGACGATTTCCCCTTGCCACGAATCGACCAGCTCGTGGATTCAACAGCTGGATGCGAGCTCATGAGTTTCCTGGATGCATATTCCGGTTACCACCAGATCCACATGAACCCGCTCGACATCCCCAAAACATCCTTCATCACTCCATTCGGCACATTTTGTCACCTCAGGATGCCTTTCGGCTTAAGGAACGCAGGAGCAACCTTCGCTAGGCTGGTGTACAAGGTCCTTGGCAAGCAGTTGGGCCGCAAGGCTTTCGACCATGCGATCGACCTGCAAGAGACGTTCCACAACTTGCGCGCGGCAGGCATAAAGCTGAATCCAGAGAAGTGCGTTTTCGGCGTCCGCGCAGGCAAGTTGTTGGGTTTCCTTGTTTCCGAAAGAGGCATCGAGGCGAATCCCGAGAAAATCGATGCCATCCAGCAAATGAAGCCTCCGTCAAGCGTACATGAAGTACAAAAGCTCGCAGGCCGAATTGCAGCACTCAGTCGATTCCTCTCAAAGGCGGCCGAAAGAGGTTTGCCCTTCTTCAAGACCCTCCGGGGCGCGGGAAAGTTTAATTGGACACCAGAGTGCCAAGCAGCATTCGACGAGCTAAAGCAATACTTGCAAAGTCCGCCAGCTCTGATAAGCCCACCCCCAGGAAGCGAACTGCTATTATACTTGGCAGCTTCGCCGGTGGCAATCAGTGCAGCACTCGTCCAAGAAACAGAGTCCGGACAGAAACCGGTCTACTTCGTCTCCGAAGCACTACAAGGAGCGAAGACAAGGTACATTGAAATGGAAAAGCTCGCTTACGCTCTAGTGATGGCTTCGCGCAAGCTTAAGCACTACTTCCAGGCCAACAAAGTCATAGTGCCATCACAGTACCCCTTGGGCGAAATACTCCGAGGCAAGGAAGTCACTGGCCGGCTCAGCAAGTGGGCGGCAGAGCTATCTCCGTTCGACTTGTATTTTGTTGCACACTCTGCTATCAAGTCTCAAGTGCTAGCTGACTTCGTAGCTGAATGGACTCCAATACTTGCCCCCGACCCCGAGCCGGCCGAACAGTTCTGGGTGATGTGCTCTGACGGTTCGTGGTCGCACAAGGGGGCAGGCGTTGCGACAGTCCTCTTTTCGCCGAATGGTGTGCCAATTCGGTACGCAGCGAGATTACAGTTCGACACAACCAACAATGTAGCAGAATACGAAGCCGTTCTCCTGGGCCTAAGAAAGGCGAAAGCACTGGGAGTCCGACGCCTGCTAATTCGAACTGACTCCAAGTTGGTAGCAGGTCATGTTGACAAATCCTTCGAGGCAAAAGAAGAGGGCATGAAGAAGTATCTGGAGGCTGTTCGGTCCATGGAAAAATGCTTCACCGGCATAACGGTCAAACACTTGCCTAGAGACCAGAACGAGGAGGCAGACGCCTTGGCGAAATCCGCTGCTTGTGGTGGCCCACATTCGCCGGGCATCTTTTTCGAAGTCCTGCATGCTCCAAGTGTGCCCATGGACTGCTCCGAAGTCATGGCAATCGACCGGGAGAAACGGGGCGAAGACCCACATGACTGGCGAACCCCATTTGTGAAACACCTTGAAACAGGCTGGCTTCCGGTAGACGAAGCAGAAGCGAAGCGTTTGCAGCTCAGAGCCACGAAATATAAGATGGTTTCGGGTCAGCTTTACCGCACAGGGGTACTTCAACCCTTACTTCGTTGTATCTCATTTGCCGACGGCGAAGAAATGGCAAAAGAGATACACCAGGGGCTATGCGGCGCGCACCAGGCTGCAAGAACAGTGGCCTCCAAAGTATTTAGACAAGGAGTTTATTGGCCCACTGTGTTGAAAGTCTGTGTTGAGCAAATCAAGAAGTGCGAAAGTAGCCAGCGTCATAGCCGAAGCCAAGCCGCGCCCCAGTATGATCTGCAGCCCATTGCACCAATATGGCCCTTCGCCAGATGGGGACTGGACATCATTGGGCCGTTCCCAGTAGCGCGAAATGGGTATAAATTCGCAATTGTAGCTGTGGAATATTTCTCTCGATGGATTGAAGCCGAACCCCTAGGGGCAATCACTTCGGCAGCAGTACAGAAATTTGTATGGAAAAACATTGTTTGCCGTTTCGGAGTGCCAAAGGAGTTCATTACTGACAACGGCAAGCAGTTTGACTTTGTTAAGTTCAGAGAAATGTGCGAAGGGCTTAACCTGGAAATCAATTTCGCGTCGGTCGCACACCCGCAGTCAAATGGGGCGGCCGAACGTACAAATGGCAAGATCTTAGAAGCACTGAAGAAAAGACTTGAAGGGGCGGCGAAAGGCAAATGGCCAGAGGAATTGCTATCGGTTCTCTGGGCTCTTCGGACGACCCCCACAAGACCAACCAAGTTTAGCCCGTTTATGCTTCTTTATGGCGATGAGGCAATGACCCCAGCAGAGCTAGGGGCTAAGTCACCAAGGGTGATGTTTTCCGGGGGCGAAGAAGGAAGCGAATTATCGCTCGAACTCTTGGAAGGAGTAAGAGTCAAAGCGCTCGAGCACATGCACAAGTACGCCACAAGCACTTCGGCAACTTACAACAAAAAAGTTCGACCCACGGAGCACATACCTGGTCATCTCGTCCTAAGGAAGAAGGCGAACCCAGTAGTTGGCAAGCTTGAATCAAAGTGGGAAGGACCATACCTCATCAAGCGCAAGTCCAGGACGGGATCTTTTCGCCTAGCGACACTCGAAGGCGAGGAGTTCGACCATTCCTGGAACGCCGCCTCCCTCAAGCGCTTCTATGTCTAG

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Protein seq

MAAEEGAEPSASVAEDREAQVPSQPPSAPAPPQPSSAPATSVQVLNMADVVMAAAAARALQTRAEILSTNQLVVPQAAPSQPAVPTALTVVQAQISLDPEAQAEADMEAMRQNMTRLQDMLRQMQEQQQAYEATRRTKATSAPILQYPAGYAQPQVRPQVVTQPSPPLAAQPPVYFTGQHQPPGQAPQSVAEGASALQAQLQAFLQQLNQPHYISSTTPSAHPVGNTSQGAPNWLPPIQPGSGPSPWSQGPQFDFVNTAQVPTVRQQVPTPGFGTNQAPIRAAMMWSQPIFDPSMAAQQVPPVGAGQSNATAQLHAQAAISPFATPYPQQGAVNRAGGKKGLPLSGGIKTRPIPPQFKFPPVPRYSGETDPKEFLSIYESAIEAAHGDENTKAKQLRDVFVLNFRGTYEEPKTQQHLLGIRQRLGESIREYMRRFSQARCQVQDITEASVINAASAGLLEGELTRKIANKEPQTLEHLLRIIDGFARGEEDSKQRQAIQAEYDKASVAAAQAQAQVQIAEPPPLSIRQSQPAIQGQPPRQGQAPMTWRKFRTDRAGKAVMAVEEVQALRKEFDAQQASNHQQPARKKVRKDLYCAFHGRSSHTTEQCRNIRQRGNAQDPRPQQGTTVEAPREAVQEQTPPAEQRQDTQRRIRMVRSITSAGEGAPQYVNQLISFGPEDTKGVLFPHQDPLVISAEIAGFEVRRILVDGGSSADVIFAEAYAKMGLPTQALTLAPASLRGFGGEAVQVLGQALLLIAFGSGENRSEEQILFDVVNIPYNYNAIFGRATLNKFEDISHHNYLKLKMPGPTGVIVVKGLQPSAASKCDLAIINRAVHNVETEPHERPKHTPKPTPHGKVTKVQIDDADPTKLVSLGGDMGEEEVESILEVLKKNIDIFPWSPDEVGGIPADLIMHHLAVKPNIRPRKQKLRKMSADRQEAAKTEVQKLLRPGVIQEIDHLEWLANPVLVRKSNGKWRTCVDFTDLNKACPKDDFPLPRIDQLVDSTAGCELMSFLDAYSGYHQIHMNPLDIPKTSFITPFGTFCHLRMPFGLRNAGATFARLVYKVLGKQLGRKAFDHAIDLQETFHNLRAAGIKLNPEKCVFGVRAGKLLGFLVSERGIEANPEKIDAIQQMKPPSSVHEVQKLAGRIAALSRFLSKAAERGLPFFKTLRGAGKFNWTPECQAAFDELKQYLQSPPALISPPPGSELLLYLAASPVAISAALVQETESGQKPVYFVSEALQGAKTRYIEMEKLAYALVMASRKLKHYFQANKVIVPSQYPLGEILRGKEVTGRLSKWAAELSPFDLYFVAHSAIKSQVLADFVAEWTPILAPDPEPAEQFWVMCSDGSWSHKGAGVATVLFSPNGVPIRYAARLQFDTTNNVAEYEAVLLGLRKAKALGVRRLLIRTDSKLVAGHVDKSFEAKEEGMKKYLEAVRSMEKCFTGITVKHLPRDQNEEADALAKSAACGGPHSPGIFFEVLHAPSVPMDCSEVMAIDREKRGEDPHDWRTPFVKHLETGWLPVDEAEAKRLQLRATKYKMVSGQLYRTGVLQPLLRCISFADGEEMAKEIHQGLCGAHQAARTVASKVFRQGVYWPTVLKVCVEQIKKCESSQRHSRSQAAPQYDLQPIAPIWPFARWGLDIIGPFPVARNGYKFAIVAVEYFSRWIEAEPLGAITSAAVQKFVWKNIVCRFGVPKEFITDNGKQFDFVKFREMCEGLNLEINFASVAHPQSNGAAERTNGKILEALKKRLEGAAKGKWPEELLSVLWALRTTPTRPTKFSPFMLLYGDEAMTPAELGAKSPRVMFSGGEEGSELSLELLEGVRVKALEHMHKYATSTSATYNKKVRPTEHIPGHLVLRKKANPVVGKLESKWEGPYLIKRKSRTGSFRLATLEGEEFDHSWNAASLKRFYV

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.0 0.0 0.0

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_03g0439900 SBH 0.136089 0.941817 1.258883
Nipponbare | IRGSP 1.0 | MSU LOC_Os03g34240 RBH 0.0 0.000000 0.0
Nipponbare | IRGSP 1.0 | RAP-db Os03g0439900 SBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) NA NA NA NA NA
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_10g0006221 SBH 0.108103 2.532727 1.637422
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) NA NA NA NA NA
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) NA NA NA NA NA
PR 106 | Os127742RS1 | Gramene(+IsoSeq) NA NA NA NA NA
Minghui 63 | MH63RS3 | HZAU OsMH63_03G0330300 RBH 0.002986 0 0
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) NA NA NA NA NA
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_03G0336600 RBH 0 0 0
LIMA | Os127564RS1 | Gramene(+IsoSeq) NA NA NA NA NA
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) NA NA NA NA NA
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) NA NA NA NA NA
LIU XU | Os125827RS1 | Gramene(+IsoSeq) NA NA NA NA NA
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) NA NA NA NA NA
N22 | OsN22RS2 | Gramene(+IsoSeq) NA NA NA NA NA
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) NA NA NA NA NA
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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