Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os03g20380 | OGI:03030890 | 16/16 | Nipponbare | IRGSP 1.0 | MSU | Chr03:11526272-11531983 | ||||||||
| Gene Symbol | CK1, OsCK1, CIPK31, OsCIPK31, Os-CIPK3, OsSnRK3.11, SnRK3.11, CIPK03 | ||||||||||
| DNA seq | TGAATCAAACTCCGCCTATAGTTGACGGAGGAGGCTAGACTTATTCAAATGTTGTTTGAAACTCACAAACTGTCAGCCCGTTGCATTGCGGCATCTGATTGTGTCCCGTTACAACCTTCCGAGGCCACAGAATAAATGAACTAACACGGCGACAAGCTCATCCACAGCAGGCATCGCGCCCGTTGTTTCATCGGAGCAGCCTACCTATCAACGAACCAACGAATCTTTCCCTCTCTTTTTTTCTTTCCTTTTTCTCTTGTTACAAAAAGCTACTCTACGGCGAACACCCCATTGATGATGGCAGAGCAGCTATGTACACGAAGAACCGGTGCCCCGAAAGCCATGGCAAAAACCACGTTCACGCCGCGGCGCCGTTGCCTTCGACCTCGCCGTCGCACTTCCAGACCACGTCCTTGAGCTGGGTCGACAGGGTTCTGTAGAACTGTTGTTTCACAGCAGAATTGATTTTGGTTAAACTTGGCAGTAAATAGCAAGTTGGAAATAGCGAAATTTCCGGTGTCAAAGAATGGCACCTTTTGGAACTCCAGAGTGTCCCCCTTTGCCTTCTTGAGCTCAACCACATGTAAGGATGGAGCTACTTGGAAAACCTATTATTGGTCATAAATCTCAGTGAACAGTGGTTCCTTGATGTTTTCAGTATTTTGTTAGAATGGGGTTTCAACTTACCTCAGTTGCAACATTGAGATTGCCTTTTCTACCTGCTTTCAGGTTCTCCATGCGCATCTGGAGTGAACAAACAAACTTAGTAGGACTCGAGGTATGGAAGTCGGTTGTAAGAACTTTATTTCCTGATAACTTTTGATGTATGTGGGAGTAGTAAGAGAAGTTTCTCTGTGCACATAGTAGGCTATATGAATACCTTGTAATTTTTCTTTTGAATATCAAATCCAAGTGGCTTTGCAGCTTCTTCAATCTTGGTGATAATTTCTTTTGGAGGACATTGTGATGTGAATCTTGTCTCTCTTTTATACTCCTGTAACAATATTTGCACTAATTAGTCCACTGCAATGATAGTTTTTAAAATACTTCACAAAAACAAACTGGTTCTGAAAAATGGGGAACTATAATATTGAAAGGGTTATAATATACTTTACTAATTGGAGCAGAATTATCTGACCTTTTTTGCCTCGAACAAATTGTCCAGATTCAGTGCCTGATTCAGTGAAATGAGTTCAAACGCGTTCATAGAGGTAGGCTGATCTTCAGTTTCTTCTTTGACATGCCGGTCCTGTTAATCGGTAAATGTATAAAAAAAAGTTAATCCTCTTATTCCTACCACAAGAGGCTGAATGTTTTGAAATAAATAGTCCAATTGACTCACTTCGGAGTCTCCAAAAGCAGCATCGACATCGTCAAAACTAGTTTCATATTTCTCGTCAAATACAGGCGGTTTGTAACCCTTTTTGAACCAAGGATCTTCCAGTATTTGAGAAATGGTGATCCTCTGCACAAAATTCAACAATGGCAGAAATCAGGTAAATTGGGGTTCAATGACTACTTTTTGGAATTGAAAAGGTTAACAGAACGACTCGGTTAAACAATAAAAGATGCAAGGTTGTAAACAAATTTCATTTCAATGTGAAAGATCCACCTAGTCATAGACGCATAAAACCACATTCGTTCCACGACTGATTATTGCTTGCTCAAAATGCTTGTAGTTCTGTTTAGATATGTTTTAGCCTACTGTATATCTGAGTCCTTTGAGCAATAAGATCTCAAAATTTATACGAAGCTTACAGTTGTAGGGTTGGGATCCAGAATTCTGGTGATCAGCTTCTTAGCTCCAGTAGAAAACCAAGAGGGACAGGTAAACTGAGCTTCAGAGATCTGTGATCGAGAAGAGAGTAAGAAAAAATAATTGGCATTCACAAAACCTGGGTGTTTTGTATAGTTTTTGTATGTATTACCTTTTTATAAAGAGCAATGATGTTGTCATCCTCAAATGGTAAAAACCCAGCAAGCAGAACATAAAGGATTACCCCACAAGACCAGATATCTGCAGCTGCCCCATCATAGCCTCTGTCCTCAATCACCTACAGGAACAGATCAAACACTATGTTAGAAATGTTAATGTAGTGCCAATGTGCAATCAACATGTGTAATACTAATCTACTATGACAAGAAAAAAAAGATTACCTCTGGAGCAACATAATTAGGAGTTCCACATGTCGTGTGCAGCAAACCGTCAGCCTGTATAGGTGAATTCAATAATATCAGACCAGTGATAATTTAAAAGGCCAAACAAGAACAACAACGCAACTATTATTGAGAACATTATGATACCTTCACTTGCTCGGTTAAAGCACTCAAACCAAAGTCAGATACTTTCAGGTTTCCAGAAGCATCAAGCAGCAAATTTTCTAACTGAAAACGCATGTTAAAGATCAGCATATGCTCATAACAGTTGTTGCTCACTTGTTCATGATCAGGACGTTAAGCCTTTACCTTCAAGTCTCTGTGGTACACACCCCTACTGTGGCAGTAGTCAACTGCATTGATAAGTTGTTGAAAGTATTTTCGTGCTTCCTCCTCCTTCAACCTTCCATTAGTTGCCTTTGTAATTGGTATATAATGTCAGTTAAAATCAACATAACATGATAATATACCATGAATCAATATTCTGACATCGGGCAATCCTTTCATAAGTTTTAGATCTCAAATTGGCACTTACAATGATTTCAAAGAGCTCTCCTCCAGTAACATATTCCAGAACAATGAAAATTCTTGCTTTACTTCCCATGACCTGAGGTAGACATATTTTTCAGCCTAAGGTTATTACTGTTGGCATGAATAAACATATTTTTAAGAGGTTTGATAAATCATGAAGTGCAGGCCACTTTGTGACTTTACCTCGAACAGCCGAACAACATTAGGATGCTTTACTAACTTCATAGTACAAATTTCACGCCTAATCTGCATTGAATTTAGAATGGCATGAGCATAAAAATATCAAATAAATAATTTCTTCCTTTCAAAAATGTATATGTGATTTGTTCCTTGGAATTGCACATATGTAAAACTATACATTTGTGTTATGAGTTCTAACCACAACTTTTGCATCTAATGTTATTCTGTGTCTAAAATCTCTATGGTTAGAACAGTATAATGAAGAGCAAAGCCTATTCAATGGAATTGAGAACATGAACATCCATGTGGCATGGGCAAAACATATCTTGAATTGTACAAAATGAGGTCCTTTCTTTTTACTTCAACTTTTCATAAAGTTGACAGCAATTAGAAACAGCACAAGGCACCAGGAGAACATACTGAGTTGGTAATATGACTTCAACTGGAAGATCACCATTTGGGTATATCTCGATGTCATGCAAATATGTACGTAGTCATGTGGACACGGAATCATTCTTAATTGAAGTTACATCTTCCTATGCTCCCATGCTGGCACGGCAACATCCAAGGAAGAAAATTTTTTCTTCAGTTTTGTTCCTTGATACAAAGATGCAAGTTGATTGTAGTAAATGTTGATGAAAGAAAATCACATATTTCAATTACACATGTGGTCAATTACGTAAGAAACATACATTTTTTTGGGAGGTAAACTTTGTTGACTATTACAAATGATGGTAAGATTGGCTGTATGGTTTACTGAAAGCGATATAGGAAACTTCGATTTTTGACCACTTTATTCCTAGTGGACTGTTTACCTCAAAAAAGGATATTCCTAGTGGACTGAATCACAGAGGTTAGTCTGATATATGAATTAAAGATATTGGACGAACACAGTGATTGATAAAAAAACTGATGCAATGCCTTATAAGGGAATTGATTGAGAATTGCTCCAAAAAATAAATGCCTGAGAATGACCTGTTCAACCAATCTGTGCTTCTGAACCTTCTCCTTGTCAAGGATTTTGATAGCAACTGGTTCGTCATTTTCAGTGTTCTTCGCAAACCGGACCTTTGCAAAGGTTCCTTCTCCAATGGTGCGCCCGAGCTCATACTTCCCTACACGGCGCTTCACCTTTGGAGATAATGCAGCCCTCTTAGCCCTATACATCTTCCAACAAATGAAGGTTCCTAGGAACCTTCAAGTTATTCAAGTACCTGCAAGTATTCAATAAATCAGGCTATGAAAAGGATTTACTTAACATTGGACAATTAGACATTGAAATGTCAAGGAACAAAAGCCATAACTAAATCATGATATATGAGAGAAAATTCAGAGAAAATTGGGACAGCCTGACACAAAGTGTGTTGTCATATCTATCGCAAAAGGCAAGTGATATTACAACTTGAAAACCTGAACTATATATGGTGGCGAGCTAGATCTGATCACACAAACATGTGTTTTAGAATGGTGGCGAACTATATATGTGTTTTGGATCTGATCACTACAGTATCAGTGATACCGTATCACAGATGCAGCAGAAATCTTGAAGCAACTGTTCACATGGACAATTCTACAGAAGATGGGTACCAAGGACTCTCAATAGATCTCTTTAAAAAAAAAATGAAGAAAAAACTACGGAGAATACTGTATCCAGGTTGGTAGCAAGAATTGATTAAAACATCTTAGGAAGTTAGAACTGTTGAGAGTTCTTCAATAGACATACATACAGCTGATAGTAAAATTCACAATTTGACAAGCAATAGTATACATAGATTCACTAAGAACTAACAAGGAGTACCGGTACAAGGCATATCGACAAATTTAGTTATTCATCCTACTGTAATTTAATCATTCTATTTAAAAAACCGGAAGTACATTTCATGAAAAGAATATTCTTTCAGGAACCGGTCTGCCACAAGGAAAAAGGAAAAAAAGAAAGGAGAATGAGGTAGTCATTTGTAAATTCGAAATTTTAGTACCAGGAACAGTAAACAACACCTGATGAAAATATATAAAATGACCAAACAACTCCAAAACAGCGGTGCTAAATTAACTTTGACTTTATCCACATAAAAGATGGCAATGACTAATGACTGATGACAGAAGCTGAGCTGGAGATGCAGCATCTCTGAGAAAACGCACATGCAAGTGCAGCCGAAAGGCAAAAGGACCAGCACAAGGTTATCTTTTTGAATGACTGCATCACTACTAAAAACCTCAAGATCTGCAAAAAGTTCCCCGGCCTTTCGCAAGTAAAACATCGATAGCATCCGACAGAAGCACTGCCATATGTTCAATCATGCAAGTACATGAAAGACCGCATAGGGGAAATCACCAGTTGCCGAATGATGATATGCTATCAGATGGCACTTGTACAGAATCACTAGAATGCAAAACAAAATATCGTCCAAAGAAGAAAAAAAAAGCACTTGTACAGAAGTCCAGATATGTTTTGCTGAAAGAAAAAGGAAAAGCACGAGGATAACTGTTATCTGAAGGGCAAAGACACAATGAGCTGGAAATGCCGAGAACACGCATCCTTCACAGGACAACCGAAATGCAAAAGAAATACACACCAGCAAGCACCTAACTCTTCCCCCAACCCATCCAAAGCAAGCCAGAATCTCAGAAATTGTCCCAACAAGAAGGTCCTAACATCCCCAGAACGCAAAATTCAACCACCACAAAGCCATAGGAGATAGACAAATTCATTCAGGCTGAGAGACACCGATTAACCTTACCTTCAACTCAGAGACCAGCCGGAGCAGCAGCTGGACAGCAGATTCAGTTCTCTCAAGAACAGGAGGAAACTGAGCCAGGTTGGAGGAGCAGAGGAGGATGGAG
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| CDS seq | ATGTATAGGGCTAAGAGGGCTGCATTATCTCCAAAGGTGAAGCGCCGTGTAGGGAAGTATGAGCTCGGGCGCACCATTGGAGAAGGAACCTTTGCAAAGGTCCGGTTTGCGAAGAACACTGAAAATGACGAACCAGTTGCTATCAAAATCCTTGACAAGGAGAAGGTTCAGAAGCACAGATTGGTTGAACAGATTAGGCGTGAAATTTGTACTATGAAGTTAGTAAAGCATCCTAATGTTGTTCGGCTGTTCGAGGTCATGGGAAGTAAAGCAAGAATTTTCATTGTTCTGGAATATGTTACTGGAGGAGAGCTCTTTGAAATCATTGCAACTAATGGAAGGTTGAAGGAGGAGGAAGCACGAAAATACTTTCAACAACTTATCAATGCAGTTGACTACTGCCACAGTAGGGGTGTGTACCACAGAGACTTGAAGTTAGAAAATTTGCTGCTTGATGCTTCTGGAAACCTGAAAGTATCTGACTTTGGTTTGAGTGCTTTAACCGAGCAAGTGAAGGCTGACGGTTTGCTGCACACGACATGTGGAACTCCTAATTATGTTGCTCCAGAGGTGATTGAGGACAGAGGCTATGATGGGGCAGCTGCAGATATCTGGTCTTGTGGGGTAATCCTTTATGTTCTGCTTGCTGGGTTTTTACCATTTGAGGATGACAACATCATTGCTCTTTATAAAAAGATCTCTGAAGCTCAGTTTACCTGTCCCTCTTGGTTTTCTACTGGAGCTAAGAAGCTGATCACCAGAATTCTGGATCCCAACCCTACAACTAGGATCACCATTTCTCAAATACTGGAAGATCCTTGGTTCAAAAAGGGTTACAAACCGCCTGTATTTGACGAGAAATATGAAACTAGTTTTGACGATGTCGATGCTGCTTTTGGAGACTCCGAAGACCGGCATGTCAAAGAAGAAACTGAAGATCAGCCTACCTCTATGAACGCGTTTGAACTCATTTCACTGAATCAGGCACTGAATCTGGACAATTTGTTCGAGGCAAAAAAGGAGTATAAAAGAGAGACAAGATTCACATCACAATGTCCTCCAAAAGAAATTATCACCAAGATTGAAGAAGCTGCAAAGCCACTTGGATTTGATATTCAAAAGAAAAATTACAAGATGCGCATGGAGAACCTGAAAGCAGGTAGAAAAGGCAATCTCAATGTTGCAACTGAGGTTTTCCAAGTAGCTCCATCCTTACATGTGGTTGAGCTCAAGAAGGCAAAGGGGGACACTCTGGAGTTCCAAAAGTTCTACAGAACCCTGTCGACCCAGCTCAAGGACGTGGTCTGGAAGTGCGACGGCGAGGTCGAAGGCAACGGCGCCGCGGCGTGA
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| Protein seq | MYRAKRAALSPKVKRRVGKYELGRTIGEGTFAKVRFAKNTENDEPVAIKILDKEKVQKHRLVEQIRREICTMKLVKHPNVVRLFEVMGSKARIFIVLEYVTGGELFEIIATNGRLKEEEARKYFQQLINAVDYCHSRGVYHRDLKLENLLLDASGNLKVSDFGLSALTEQVKADGLLHTTCGTPNYVAPEVIEDRGYDGAAADIWSCGVILYVLLAGFLPFEDDNIIALYKKISEAQFTCPSWFSTGAKKLITRILDPNPTTRITISQILEDPWFKKGYKPPVFDEKYETSFDDVDAAFGDSEDRHVKEETEDQPTSMNAFELISLNQALNLDNLFEAKKEYKRETRFTSQCPPKEIITKIEEAAKPLGFDIQKKNYKMRMENLKAGRKGNLNVATEVFQVAPSLHVVELKKAKGDTLEFQKFYRTLSTQLKDVVWKCDGEVEGNGAAA |
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| Function | CBL-interacting protein kinase 31 [UniProtKB/Swiss-Prot:Q6X4A2] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os03g20380 | LOC_Os03g20380.1 | Chr03 | 11526272 | 11531983 | - | MSU_osa1r7 | ||
| CDS seq | ATGTATAGGGCTAAGAGGGCTGCATTATCTCCAAAGGTGAAGCGCCGTGTAGGGAAGTATGAGCTCGGGCGCACCATTGGAGAAGGAACCTTTGCAAAGGTCCGGTTTGCGAAGAACACTGAAAATGACGAACCAGTTGCTATCAAAATCCTTGACAAGGAGAAGGTTCAGAAGCACAGATTGGTTGAACAGATTAGGCGTGAAATTTGTACTATGAAGTTAGTAAAGCATCCTAATGTTGTTCGGCTGTTCGAGGTCATGGGAAGTAAAGCAAGAATTTTCATTGTTCTGGAATATGTTACTGGAGGAGAGCTCTTTGAAATCATTGCAACTAATGGAAGGTTGAAGGAGGAGGAAGCACGAAAATACTTTCAACAACTTATCAATGCAGTTGACTACTGCCACAGTAGGGGTGTGTACCACAGAGACTTGAAGTTAGAAAATTTGCTGCTTGATGCTTCTGGAAACCTGAAAGTATCTGACTTTGGTTTGAGTGCTTTAACCGAGCAAGTGAAGGCTGACGGTTTGCTGCACACGACATGTGGAACTCCTAATTATGTTGCTCCAGAGGTGATTGAGGACAGAGGCTATGATGGGGCAGCTGCAGATATCTGGTCTTGTGGGGTAATCCTTTATGTTCTGCTTGCTGGGTTTTTACCATTTGAGGATGACAACATCATTGCTCTTTATAAAAAGATCTCTGAAGCTCAGTTTACCTGTCCCTCTTGGTTTTCTACTGGAGCTAAGAAGCTGATCACCAGAATTCTGGATCCCAACCCTACAACTAGGATCACCATTTCTCAAATACTGGAAGATCCTTGGTTCAAAAAGGGTTACAAACCGCCTGTATTTGACGAGAAATATGAAACTAGTTTTGACGATGTCGATGCTGCTTTTGGAGACTCCGAAGACCGGCATGTCAAAGAAGAAACTGAAGATCAGCCTACCTCTATGAACGCGTTTGAACTCATTTCACTGAATCAGGCACTGAATCTGGACAATTTGTTCGAGGCAAAAAAGGAGTATAAAAGAGAGACAAGATTCACATCACAATGTCCTCCAAAAGAAATTATCACCAAGATTGAAGAAGCTGCAAAGCCACTTGGATTTGATATTCAAAAGAAAAATTACAAGATGCGCATGGAGAACCTGAAAGCAGGTAGAAAAGGCAATCTCAATGTTGCAACTGAGGTTTTCCAAGTAGCTCCATCCTTACATGTGGTTGAGCTCAAGAAGGCAAAGGGGGACACTCTGGAGTTCCAAAAGTTCTACAGAACCCTGTCGACCCAGCTCAAGGACGTGGTCTGGAAGTGCGACGGCGAGGTCGAAGGCAACGGCGCCGCGGCGTGA
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| Protein seq | MYRAKRAALSPKVKRRVGKYELGRTIGEGTFAKVRFAKNTENDEPVAIKILDKEKVQKHRLVEQIRREICTMKLVKHPNVVRLFEVMGSKARIFIVLEYVTGGELFEIIATNGRLKEEEARKYFQQLINAVDYCHSRGVYHRDLKLENLLLDASGNLKVSDFGLSALTEQVKADGLLHTTCGTPNYVAPEVIEDRGYDGAAADIWSCGVILYVLLAGFLPFEDDNIIALYKKISEAQFTCPSWFSTGAKKLITRILDPNPTTRITISQILEDPWFKKGYKPPVFDEKYETSFDDVDAAFGDSEDRHVKEETEDQPTSMNAFELISLNQALNLDNLFEAKKEYKRETRFTSQCPPKEIITKIEEAAKPLGFDIQKKNYKMRMENLKAGRKGNLNVATEVFQVAPSLHVVELKKAKGDTLEFQKFYRTLSTQLKDVVWKCDGEVEGNGAAA
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os03g20380 | LOC_Os03g20380.2 | Chr03 | 11526273 | 11531983 | - | MSU_osa1r7 | ||
| CDS seq | ATGTATAGGGCTAAGAGGGCTGCATTATCTCCAAAGGTGAAGCGCCGTGTAGGGAAGTATGAGCTCGGGCGCACCATTGGAGAAGGAACCTTTGCAAAGGTCCGGTTTGCGAAGAACACTGAAAATGACGAACCAGTTGCTATCAAAATCCTTGACAAGGAGAAGGTTCAGAAGCACAGATTGGTTGAACAGATTAGGCGTGAAATTTGTACTATGAAGTTAGTAAAGCATCCTAATGTTGTTCGGCTGTTCGAGGTCATGGGAAGTAAAGCAAGAATTTTCATTGTTCTGGAATATGTTACTGGAGGAGAGCTCTTTGAAATCATTGCAACTAATGGAAGGTTGAAGGAGGAGGAAGCACGAAAATACTTTCAACAACTTATCAATGCAGTTGACTACTGCCACAGTAGGGGTGTGTACCACAGAGACTTGAAGTTAGAAAATTTGCTGCTTGATGCTTCTGGAAACCTGAAAGTATCTGACTTTGGTTTGAGTGCTTTAACCGAGCAAGTGAAGGTGATTGAGGACAGAGGCTATGATGGGGCAGCTGCAGATATCTGGTCTTGTGGGGTAATCCTTTATGTTCTGCTTGCTGGGTTTTTACCATTTGAGGATGACAACATCATTGCTCTTTATAAAAAGATCTCTGAAGCTCAGTTTACCTGTCCCTCTTGGTTTTCTACTGGAGCTAAGAAGCTGATCACCAGAATTCTGGATCCCAACCCTACAACTAGGATCACCATTTCTCAAATACTGGAAGATCCTTGGTTCAAAAAGGGTTACAAACCGCCTGTATTTGACGAGAAATATGAAACTAGTTTTGACGATGTCGATGCTGCTTTTGGAGACTCCGAAGACCGGCATGTCAAAGAAGAAACTGAAGATCAGCCTACCTCTATGAACGCGTTTGAACTCATTTCACTGAATCAGGCACTGAATCTGGACAATTTGTTCGAGGCAAAAAAGGAGTATAAAAGAGAGACAAGATTCACATCACAATGTCCTCCAAAAGAAATTATCACCAAGATTGAAGAAGCTGCAAAGCCACTTGGATTTGATATTCAAAAGAAAAATTACAAGATGCGCATGGAGAACCTGAAAGCAGGTAGAAAAGGCAATCTCAATGTTGCAACTGAGGTTTTCCAAGTAGCTCCATCCTTACATGTGGTTGAGCTCAAGAAGGCAAAGGGGGACACTCTGGAGTTCCAAAAGTTCTACAGAACCCTGTCGACCCAGCTCAAGGACGTGGTCTGGAAGTGCGACGGCGAGGTCGAAGGCAACGGCGCCGCGGCGTGA
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| Protein seq | MYRAKRAALSPKVKRRVGKYELGRTIGEGTFAKVRFAKNTENDEPVAIKILDKEKVQKHRLVEQIRREICTMKLVKHPNVVRLFEVMGSKARIFIVLEYVTGGELFEIIATNGRLKEEEARKYFQQLINAVDYCHSRGVYHRDLKLENLLLDASGNLKVSDFGLSALTEQVKVIEDRGYDGAAADIWSCGVILYVLLAGFLPFEDDNIIALYKKISEAQFTCPSWFSTGAKKLITRILDPNPTTRITISQILEDPWFKKGYKPPVFDEKYETSFDDVDAAFGDSEDRHVKEETEDQPTSMNAFELISLNQALNLDNLFEAKKEYKRETRFTSQCPPKEIITKIEEAAKPLGFDIQKKNYKMRMENLKAGRKGNLNVATEVFQVAPSLHVVELKKAKGDTLEFQKFYRTLSTQLKDVVWKCDGEVEGNGAAA
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os03g20380 | LOC_Os03g20380.3 | Chr03 | 11526273 | 11531983 | - | MSU_osa1r7 | ||
| CDS seq | ATGTATAGGGCTAAGAGGGCTGCATTATCTCCAAAGGTGAAGCGCCGTGTAGGGAAGTATGAGCTCGGGCGCACCATTGGAGAAGGAACCTTTGCAAAGGTCCGGTTTGCGAAGAACACTGAAAATGACGAACCAGTTGCTATCAAAATCCTTGACAAGGAGAAGGTTCAGAAGCACAGATTGGTTGAACAGATTAGGCGTGAAATTTGTACTATGAAGTTAGTAAAGCATCCTAATGTTGTTCGGCTGTTCGAGGTCATGGGAAGTAAAGCAAGAATTTTCATTGTTCTGGAATATGTTACTGGAGGAGAGCTCTTTGAAATCATTGCAACTAATGGAAGGTTGAAGGAGGAGGAAGCACGAAAATACTTTCAACAACTTATCAATGCAGTTGACTACTGCCACAGTAGGGGTGTGTACCACAGAGACTTGAAGTTAGAAAATTTGCTGCTTGATGCTTCTGGAAACCTGAAAGTATCTGACTTTGGTTTGAGTGCTTTAACCGAGCAAGTGAAGGCTGACGGTTTGCTGCACACGACATGTGGAACTCCTAATTATGTTGCTCCAGAGGTGATTGAGGACAGAGGCTATGATGGGGCAGCTGCAGATATCTGGTCTTGTGGGGTAATCCTTTATGTTCTGCTTGCTGGGTTTTTACCATTTGAGGATGACAACATCATTGCTCTTTATAAAAAGATCTCTGAAGCTCAGTTTACCTGTCCCTCTTGGTTTTCTACTGGAGCTAAGAAGCTGATCACCAGAATTCTGGATCCCAACCCTACAACTAGGATCACCATTTCTCAAATACTGGAAGATCCTTGGTTCAAAAAGGGTTACAAACCGCCTGTATTTGACGAGAAATATGAAACTAGTTTTGACGATGTCGATGCTGCTTTTGGAGACTCCGAAGACCGGCATGTCAAAGAAGAAACTGAAGATCAGCCTACCTCTATGAACGCGTTTGAACTCATTTCACTGAATCAGGCACTGAATCTGGACAATTTGTTCGAGGCAAAAAAGGAGTATAAAAGAGAGACAAGATTCACATCACAATGTCCTCCAAAAGAAATTATCACCAAGATTGAAGAAGCTGCAAAGCCACTTGGATTTGATATTCAAAAGAAAAATTACAAGGTATTCATATAG
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| Protein seq | MYRAKRAALSPKVKRRVGKYELGRTIGEGTFAKVRFAKNTENDEPVAIKILDKEKVQKHRLVEQIRREICTMKLVKHPNVVRLFEVMGSKARIFIVLEYVTGGELFEIIATNGRLKEEEARKYFQQLINAVDYCHSRGVYHRDLKLENLLLDASGNLKVSDFGLSALTEQVKADGLLHTTCGTPNYVAPEVIEDRGYDGAAADIWSCGVILYVLLAGFLPFEDDNIIALYKKISEAQFTCPSWFSTGAKKLITRILDPNPTTRITISQILEDPWFKKGYKPPVFDEKYETSFDDVDAAFGDSEDRHVKEETEDQPTSMNAFELISLNQALNLDNLFEAKKEYKRETRFTSQCPPKEIITKIEEAAKPLGFDIQKKNYKVFI
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os03g20380 | LOC_Os03g20380.4 | Chr03 | 11526272 | 11531983 | - | MSU_osa1r7 | ||
| CDS seq | ATGAAGTTAGTAAAGCATCCTAATGTTGTTCGGCTGTTCGAGGTCATGGGAAGTAAAGCAAGAATTTTCATTGTTCTGGAATATGTTACTGGAGGAGAGCTCTTTGAAATCATTGCAACTAATGGAAGGTTGAAGGAGGAGGAAGCACGAAAATACTTTCAACAACTTATCAATGCAGTTGACTACTGCCACAGTAGGGGTGTGTACCACAGAGACTTGAAGTTAGAAAATTTGCTGCTTGATGCTTCTGGAAACCTGAAAGTATCTGACTTTGGTTTGAGTGCTTTAACCGAGCAAGTGAAGGCTGACGGTTTGCTGCACACGACATGTGGAACTCCTAATTATGTTGCTCCAGAGGTGATTGAGGACAGAGGCTATGATGGGGCAGCTGCAGATATCTGGTCTTGTGGGGTAATCCTTTATGTTCTGCTTGCTGGGTTTTTACCATTTGAGGATGACAACATCATTGCTCTTTATAAAAAGATCTCTGAAGCTCAGTTTACCTGTCCCTCTTGGTTTTCTACTGGAGCTAAGAAGCTGATCACCAGAATTCTGGATCCCAACCCTACAACTAGGATCACCATTTCTCAAATACTGGAAGATCCTTGGTTCAAAAAGGGTTACAAACCGCCTGTATTTGACGAGAAATATGAAACTAGTTTTGACGATGTCGATGCTGCTTTTGGAGACTCCGAAGACCGGCATGTCAAAGAAGAAACTGAAGATCAGCCTACCTCTATGAACGCGTTTGAACTCATTTCACTGAATCAGGCACTGAATCTGGACAATTTGTTCGAGGCAAAAAAGGAGTATAAAAGAGAGACAAGATTCACATCACAATGTCCTCCAAAAGAAATTATCACCAAGATTGAAGAAGCTGCAAAGCCACTTGGATTTGATATTCAAAAGAAAAATTACAAGATGCGCATGGAGAACCTGAAAGCAGGTAGAAAAGGCAATCTCAATGTTGCAACTGAGGTTTTCCAAGTAGCTCCATCCTTACATGTGGTTGAGCTCAAGAAGGCAAAGGGGGACACTCTGGAGTTCCAAAAGTTCTACAGAACCCTGTCGACCCAGCTCAAGGACGTGGTCTGGAAGTGCGACGGCGAGGTCGAAGGCAACGGCGCCGCGGCGTGA
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| Protein seq | MKLVKHPNVVRLFEVMGSKARIFIVLEYVTGGELFEIIATNGRLKEEEARKYFQQLINAVDYCHSRGVYHRDLKLENLLLDASGNLKVSDFGLSALTEQVKADGLLHTTCGTPNYVAPEVIEDRGYDGAAADIWSCGVILYVLLAGFLPFEDDNIIALYKKISEAQFTCPSWFSTGAKKLITRILDPNPTTRITISQILEDPWFKKGYKPPVFDEKYETSFDDVDAAFGDSEDRHVKEETEDQPTSMNAFELISLNQALNLDNLFEAKKEYKRETRFTSQCPPKEIITKIEEAAKPLGFDIQKKNYKMRMENLKAGRKGNLNVATEVFQVAPSLHVVELKKAKGDTLEFQKFYRTLSTQLKDVVWKCDGEVEGNGAAA
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os03g20380 | LOC_Os03g20380.5 | Chr03 | 11526272 | 11531983 | - | MSU_osa1r7 | ||
| CDS seq | ATGAAGTTAGTAAAGCATCCTAATGTTGTTCGGCTGTTCGAGGTCATGGGAAGTAAAGCAAGAATTTTCATTGTTCTGGAATATGTTACTGGAGGAGAGCTCTTTGAAATCATTGCAACTAATGGAAGGTTGAAGGAGGAGGAAGCACGAAAATACTTTCAACAACTTATCAATGCAGTTGACTACTGCCACAGTAGGGGTGTGTACCACAGAGACTTGAAGTTAGAAAATTTGCTGCTTGATGCTTCTGGAAACCTGAAAGTATCTGACTTTGGTTTGAGTGCTTTAACCGAGCAAGTGAAGGCTGACGGTTTGCTGCACACGACATGTGGAACTCCTAATTATGTTGCTCCAGAGGTGATTGAGGACAGAGGCTATGATGGGGCAGCTGCAGATATCTGGTCTTGTGGGGTAATCCTTTATGTTCTGCTTGCTGGGTTTTTACCATTTGAGGATGACAACATCATTGCTCTTTATAAAAAGATCTCTGAAGCTCAGTTTACCTGTCCCTCTTGGTTTTCTACTGGAGCTAAGAAGCTGATCACCAGAATTCTGGATCCCAACCCTACAACTAGGATCACCATTTCTCAAATACTGGAAGATCCTTGGTTCAAAAAGGGTTACAAACCGCCTGTATTTGACGAGAAATATGAAACTAGTTTTGACGATGTCGATGCTGCTTTTGGAGACTCCGAAGACCGGCATGTCAAAGAAGAAACTGAAGATCAGCCTACCTCTATGAACGCGTTTGAACTCATTTCACTGAATCAGGCACTGAATCTGGACAATTTGTTCGAGGCAAAAAAGGAGTATAAAAGAGAGACAAGATTCACATCACAATGTCCTCCAAAAGAAATTATCACCAAGATTGAAGAAGCTGCAAAGCCACTTGGATTTGATATTCAAAAGAAAAATTACAAGATGCGCATGGAGAACCTGAAAGCAGGTAGAAAAGGCAATCTCAATGTTGCAACTGAGGTTTTCCAAGTAGCTCCATCCTTACATGTGGTTGAGCTCAAGAAGGCAAAGGGGGACACTCTGGAGTTCCAAAAGTTCTACAGAACCCTGTCGACCCAGCTCAAGGACGTGGTCTGGAAGTGCGACGGCGAGGTCGAAGGCAACGGCGCCGCGGCGTGA
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| Protein seq | MKLVKHPNVVRLFEVMGSKARIFIVLEYVTGGELFEIIATNGRLKEEEARKYFQQLINAVDYCHSRGVYHRDLKLENLLLDASGNLKVSDFGLSALTEQVKADGLLHTTCGTPNYVAPEVIEDRGYDGAAADIWSCGVILYVLLAGFLPFEDDNIIALYKKISEAQFTCPSWFSTGAKKLITRILDPNPTTRITISQILEDPWFKKGYKPPVFDEKYETSFDDVDAAFGDSEDRHVKEETEDQPTSMNAFELISLNQALNLDNLFEAKKEYKRETRFTSQCPPKEIITKIEEAAKPLGFDIQKKNYKMRMENLKAGRKGNLNVATEVFQVAPSLHVVELKKAKGDTLEFQKFYRTLSTQLKDVVWKCDGEVEGNGAAA
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os03g20380 | LOC_Os03g20380.6 | Chr03 | 11526273 | 11531983 | - | MSU_osa1r7 | ||
| CDS seq | ATGAAGTTAGTAAAGCATCCTAATGTTGTTCGGCTGTTCGAGGTCATGGGAAGTAAAGCAAGAATTTTCATTGTTCTGGAATATGTTACTGGAGGAGAGCTCTTTGAAATCATTGCAACTAATGGAAGGTTGAAGGAGGAGGAAGCACGAAAATACTTTCAACAACTTATCAATGCAGTTGACTACTGCCACAGTAGGGGTGTGTACCACAGAGACTTGAAGTTAGAAAATTTGCTGCTTGATGCTTCTGGAAACCTGAAAGTATCTGACTTTGGTTTGAGTGCTTTAACCGAGCAAGTGAAGGCTGACGGTTTGCTGCACACGACATGTGGAACTCCTAATTATGTTGCTCCAGAGGTGATTGAGGACAGAGGCTATGATGGGGCAGCTGCAGATATCTGGTCTTGTGGGGTAATCCTTTATGTTCTGCTTGCTGGGTTTTTACCATTTGAGGATGACAACATCATTGCTCTTTATAAAAAGATCTCTGAAGCTCAGTTTACCTGTCCCTCTTGGTTTTCTACTGGAGCTAAGAAGCTGATCACCAGAATTCTGGATCCCAACCCTACAACTAGGATCACCATTTCTCAAATACTGGAAGATCCTTGGTTCAAAAAGGGTTACAAACCGCCTGTATTTGACGAGAAATATGAAACTAGTTTTGACGATGTCGATGCTGCTTTTGGAGACTCCGAAGACCGGCATGTCAAAGAAGAAACTGAAGATCAGCCTACCTCTATGAACGCGTTTGAACTCATTTCACTGAATCAGGCACTGAATCTGGACAATTTGTTCGAGGCAAAAAAGGAGTATAAAAGAGAGACAAGATTCACATCACAATGTCCTCCAAAAGAAATTATCACCAAGATTGAAGAAGCTGCAAAGCCACTTGGATTTGATATTCAAAAGAAAAATTACAAGATGCGCATGGAGAACCTGAAAGCAGGTAGAAAAGGCAATCTCAATGTTGCAACTGAGGTTTTCCAAGTAGCTCCATCCTTACATGTGGTTGAGCTCAAGAAGGCAAAGGGGGACACTCTGGAGTTCCAAAAGTTCTACAGAACCCTGTCGACCCAGCTCAAGGACGTGGTCTGGAAGTGCGACGGCGAGGTCGAAGGCAACGGCGCCGCGGCGTGA
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| Protein seq | MKLVKHPNVVRLFEVMGSKARIFIVLEYVTGGELFEIIATNGRLKEEEARKYFQQLINAVDYCHSRGVYHRDLKLENLLLDASGNLKVSDFGLSALTEQVKADGLLHTTCGTPNYVAPEVIEDRGYDGAAADIWSCGVILYVLLAGFLPFEDDNIIALYKKISEAQFTCPSWFSTGAKKLITRILDPNPTTRITISQILEDPWFKKGYKPPVFDEKYETSFDDVDAAFGDSEDRHVKEETEDQPTSMNAFELISLNQALNLDNLFEAKKEYKRETRFTSQCPPKEIITKIEEAAKPLGFDIQKKNYKMRMENLKAGRKGNLNVATEVFQVAPSLHVVELKKAKGDTLEFQKFYRTLSTQLKDVVWKCDGEVEGNGAAA
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os03g20380 | LOC_Os03g20380.7 | Chr03 | 11526273 | 11531116 | - | MSU_osa1r7 | ||
| CDS seq | ATGAAGTTAGTAAAGCATCCTAATGTTGTTCGGCTGTTCGAGGTCATGGGAAGTAAAGCAAGAATTTTCATTGTTCTGGAATATGTTACTGGAGGAGAGCTCTTTGAAATCATTGCAACTAATGGAAGGTTGAAGGAGGAGGAAGCACGAAAATACTTTCAACAACTTATCAATGCAGTTGACTACTGCCACAGTAGGGGTGTGTACCACAGAGACTTGAAGTTAGAAAATTTGCTGCTTGATGCTTCTGGAAACCTGAAAGTATCTGACTTTGGTTTGAGTGCTTTAACCGAGCAAGTGAAGGTGATTGAGGACAGAGGCTATGATGGGGCAGCTGCAGATATCTGGTCTTGTGGGGTAATCCTTTATGTTCTGCTTGCTGGGTTTTTACCATTTGAGGATGACAACATCATTGCTCTTTATAAAAAGATCTCTGAAGCTCAGTTTACCTGTCCCTCTTGGTTTTCTACTGGAGCTAAGAAGCTGATCACCAGAATTCTGGATCCCAACCCTACAACTAGGATCACCATTTCTCAAATACTGGAAGATCCTTGGTTCAAAAAGGGTTACAAACCGCCTGTATTTGACGAGAAATATGAAACTAGTTTTGACGATGTCGATGCTGCTTTTGGAGACTCCGAAGACCGGCATGTCAAAGAAGAAACTGAAGATCAGCCTACCTCTATGAACGCGTTTGAACTCATTTCACTGAATCAGGCACTGAATCTGGACAATTTGTTCGAGGCAAAAAAGGAGTATAAAAGAGAGACAAGATTCACATCACAATGTCCTCCAAAAGAAATTATCACCAAGATTGAAGAAGCTGCAAAGCCACTTGGATTTGATATTCAAAAGAAAAATTACAAGATGCGCATGGAGAACCTGAAAGCAGGTAGAAAAGGCAATCTCAATGTTGCAACTGAGGTTTTCCAAGTAGCTCCATCCTTACATGTGGTTGAGCTCAAGAAGGCAAAGGGGGACACTCTGGAGTTCCAAAAGTTCTACAGAACCCTGTCGACCCAGCTCAAGGACGTGGTCTGGAAGTGCGACGGCGAGGTCGAAGGCAACGGCGCCGCGGCGTGA
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| Protein seq | MKLVKHPNVVRLFEVMGSKARIFIVLEYVTGGELFEIIATNGRLKEEEARKYFQQLINAVDYCHSRGVYHRDLKLENLLLDASGNLKVSDFGLSALTEQVKVIEDRGYDGAAADIWSCGVILYVLLAGFLPFEDDNIIALYKKISEAQFTCPSWFSTGAKKLITRILDPNPTTRITISQILEDPWFKKGYKPPVFDEKYETSFDDVDAAFGDSEDRHVKEETEDQPTSMNAFELISLNQALNLDNLFEAKKEYKRETRFTSQCPPKEIITKIEEAAKPLGFDIQKKNYKMRMENLKAGRKGNLNVATEVFQVAPSLHVVELKKAKGDTLEFQKFYRTLSTQLKDVVWKCDGEVEGNGAAA
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os03g20380 | LOC_Os03g20380.8 | Chr03 | 11526272 | 11531983 | - | MSU_osa1r7 | ||
| CDS seq | ATGTATAGGGCTAAGAGGGCTGCATTATCTCCAAAGGTGAAGCGCCGTGTAGGGAAGTATGAGCTCGGGCGCACCATTGGAGAAGGAACCTTTGCAAAGGTCCGGTTTGCGAAGAACACTGAAAATGACGAACCAGTTGCTATCAAAATCCTTGACAAGGAGAAGGTTCAGAAGCACAGATTGGTTGAACAGATTAGGCGTGAAATTTGTACTATGAAGTTAGTAAAGCATCCTAATGTTGTTCGGCTGTTCGAGGTCATGGGAAGTAAAGCAAGAATTTTCATTGTTCTGGAATATGTTACTGGAGGAGAGCTCTTTGAAATCATTGCAACTAATGGAAGGTTGAAGGAGGAGGAAGCACGAAAATACTTTCAACAACTTATCAATGCAGTTGACTACTGCCACAGTAGGGGTGTGTACCACAGAGACTTGAAGTTAGAAAATTTGCTGCTTGATGCTTCTGGAAACCTGAAAGTATCTGACTTTGGTTTGAGTGCTTTAACCGAGCAAGTGAAGGCTGACGGTTTGCTGCACACGACATGTGGAACTCCTAATTATGTTGCTCCAGAGGTGATTGAGGACAGAGGCTATGATGGGGCAGCTGCAGATATCTGGTCTTGTGGGGTAATCCTTTATGTTCTGCTTGCTGGGTTTTTACCATTTGAGGATGACAACATCATTGCTCTTTATAAAAAGATCTCTGAAGCTCAGTTTACCTGTCCCTCTTGGTTTTCTACTGGAGCTAAGAAGCTGATCACCAGAATTCTGGATCCCAACCCTACAACTGTAAGCTTCGTATAA
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| Protein seq | MYRAKRAALSPKVKRRVGKYELGRTIGEGTFAKVRFAKNTENDEPVAIKILDKEKVQKHRLVEQIRREICTMKLVKHPNVVRLFEVMGSKARIFIVLEYVTGGELFEIIATNGRLKEEEARKYFQQLINAVDYCHSRGVYHRDLKLENLLLDASGNLKVSDFGLSALTEQVKADGLLHTTCGTPNYVAPEVIEDRGYDGAAADIWSCGVILYVLLAGFLPFEDDNIIALYKKISEAQFTCPSWFSTGAKKLITRILDPNPTTVSFV
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 5.037602 | 5.085713 | 5.090428 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_03g0319400 | RBH | 8.135794 | 7.014333 | 19.894148 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os07g48760 | RBH | 0.000000 | 0.090830 | 0.000000 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os03g0319400 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_03g0015730 | RBH | 3.416753 | 55.418518 | 9.809047 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0015580 | RBH | 2.142261 | 0.883542 | 5.138926 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0015570 | RBH | 9.527214 | 29.713438 | 32.090359 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0015560 | RBH | 2.115830 | 0.869566 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0015400 | RBH | 61.582218 | 2.967959 | 35.266598 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_03G0191200 | RBH | 22.5667955 | 2.2451185 | 22.3552645 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_03g0015280 | RBH | 4.256374 | 0.460775 | 4.051826 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0195200 | RBH | 46.303876 | 2.513435 | 55.773346 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0015530 | RBH | 4.350849 | 0.071941 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0015530 | RBH | 8.490056 | 1.992965 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0015580 | RBH | 50.826538 | 5.607679 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0015460 | RBH | 13.775452 | 0.838290 | 8.522652 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0015400 | RBH | 3.530708 | 4.943908 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G015350 | RBH | 7.922929 | 0.198248 | 9.466333 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0015230 | RBH | 38.109406 | 2.191273 | 22.019600 |
