Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
LOC_Os03g05850 OGI:03007810 | 2/16 Nipponbare | IRGSP 1.0 | MSU Chr03:2937749-2942049
Gene Symbol -
DNA seq

TTAATTCTGCCGTGACCCTAGTGAACGAACACCAAGAAGGTGTCTCGCCGTCACCAGCTTCGCCGCCGGCAATCCTTTCGTCAGTGCATCCGCTCGCTGCTCCTCAGTCCGGACGAACTCCACAACAATTTGCCCGCCATCCACACACTCCCGTATGAAGTGATAACGGGTGTCAATATGCTTACTTCTCCCATGAAACACCGGGTTCTTCATCAATGCAATTGCTGACCTATTGTCGACGAAGAGCTTCACTGCTTTCTCCTCCACTCCCGCCACTTCTGCTAGCAACAATCTTAACCAGAGCGCTTGACAGGCCGCCGTCGTGGCTGCCATGAACTCGGCTTCACACGACGATAGTGCCACAGTTTTCTGCTTTTGCGAGCTCCACGCCACCAGACTCTGATTGATGTAGAACGCCATTCCACCAGTGCTGCGCCGATCATCCAAGTCCCCGGCGAGGTCACTGTCAGTATACCCTGTAATCTTCAGTGCCCCAGTGCCTGCAGCATACACGAGACCATAATCCATCGTTCCCTTGATGTATCTGAGAATTTGCTTCACAGCCTTGAAATGCATCACGGTTGGCCTCTCCATGAACCTGCTTGCCACCCCGACAGCATATGACAGATCCGGCCTCGTGTGAAGCAAATACCGAAGACTACCGATGATCCGCCGATACTCAGTTGCATCCACCGGGTGACCTTCTGGATCCTTGCTCAGCTGCGATCTCGGATCGATTGGAATTGAAACTGAGTTGCACTCCATCATCCCAAACTGAGACAGTAATTTCTTGGCATATGCAGTCTGTTTCAATGTGGTAGCACTCTCATCCTGATCAACCTCTATCCCGAGATAATATGTGAGCAAACCGAGATCACTCATCTCAAACTCCCCCATCATTTGTTCCTTGAAAACCTTCAATTCAGAGGGATTTTCTCCGGTGACAATGAGATCATCAACGTAAACGCCGACAATTATGCCATCACTTCCTCTGCCTCGGGTGTATACTGCCTGCTCCTGCGTACACCGATCAAAGCCGAGCTCCCTCAAGCTTCTGTCCAGGCGTATATTCCAGGCTCGCGGTGCCTGCCGGAGTCCATACAATGCCTTATGCAGCTTGAGCACAAGATGCTCTTTTCCTGATCTAGCAAACCCTTCCGGTTGTGCAACATACACCTCTTCTTCAAGTTCACCATTAAGGAATGCCGATTTGACATCAAGATGATGAACCTGCCAGCGGCGATCAGCCGCCACTGCAAGCACAACACGAACGGTATCAAGCCTCGCTACCGGAGCAAACACCTCTTCAAAATCGACCCCTTGTTTCTGCACATATCCTTTTGCAACCAACCGTGCCTTGTGCTTGATTATCTCCCCTGCCGTGTTCTTCTTGAGCTTATACACCCATTTCAGCCCAATCGCTCGGTGCCCGGCTGGCAACATGGCCAACTCCCACGTTTTGTTCTTCTCGATTGCCTCCATCTCCCTCTGCATTGCTTCTTCCCACGCAGGTTGGCCGGCAGCTTCTCGATAGCTTGATGGCTCTTCTGACTCAGCTAGGAGCGCCTCTCCATCACATTCGTCCTCCACCAAATCCACACGCGGGGCCTCACGCAGGACATCTGCCAGCGATCTATACCGCCTAGGCCCATCATCTGTATCGATGTTGTCATCTGTGCCCGGTGACGGCACCACCCCGGCAGAGTTTGTCGATGGAGAACCGGGCGTGGGCGTTCCAGGCAGAGTCGGTGATGCTGCCACCGGGCTTGCCGGTGACGGTACTTCTTCTGCCGCCACCACTGCTTCCTTCCCGGCGCGCCTGCCAGGAGACGGTGCCTGGTACGGCGGTACCACGCCGGCCGCTGTTGCCGGGCTCGGCAGCTGCTCACCAGGCTCCTCCTCCATCGCGAAATCCGTTGGCTCCTGTCCTGCAGCTGATGTCCACTCCCAAGGTACATTTTCCTCAAATACAACGTCACGACTTACATGTATGCGCCCACGACGCGGATCGAACAGACGATGAGCCTTGCTCCCTTCCTCCACACCGAGATACACGTACGGTGCACTCCTGTCGTCCAGCTTCTTGAGGTGCGGCTGCGTGTTTTTCGCGTGTGCCGTGCAGCCGAACACCTTGAGATGTCCCAGCTGTGGCTTCCTCCCCGTCCATGCCTCGAACGGAGTACGATCACCCATTGCCTTCGTCGGGAGCCGGTTAAGGAGATGCACCGCGTGACGCACCGCCTCCCCCCAAAACCTGCCCGGTACGCGCATCCCCTTCAGTAGTGAGCGTGCCATGGCCATCACCGTGCGGTTGCGCCTCTCCACCACCCCGTTTTGCTGGGGCGAGTACGGCGCTGTCAGGTGACGTTGAATCCCCGCCTCCTCGCACACCTGTGCAAACTCGCCTGACAGGAATTCACCACCCCGGTCTGACCGCAACGTCTTCACGCGCCGCCCAGCCGTGTTCTCGGCCAGTGGCTTGAACTTTACGAAAGCATCGAGCGATTGATCCTTCGTCTTGAGTACGAACACCCATATCCACCGGGAATAATCATCAACTATAAGAAAAAAATAGCGATTACCAGACATCGTATTCGGTGTAATCGGGCCGCACAGATCTATGTGCAGCAGCTCGAGCGGCTCCTCCGCCCTGAAGTGCGCCGCCGCCGGGAACGGCGCCCTGGCCTGTTTCGCCACCAGGCAAGATTGGCACAGCTGATTCGGGTGGACGATTGCCGGAACACCCCCGCCATCTCCTTGTCCACCAGCAGTTTCATTGCTTGAAAATTTACGTGTCCCAGCCGCGCATGCCACAGCCAAGCCGGGTCGTCGAGGCTGGACAGCAGGGACACGGGATGCGCCAGCTTCAACTCAATTCGGTAAAGACGATTTACAGTGCGCCTCACCTTCATCACCAGCCGCCATGGACTTTTGTCGAACACTTCGAGTACATCCTCATCCATGACCACGCGATGCCCGGTCTCTGTTAGTTGGCCCAAACTCACCATGTTACATTGCAGACTGGGGATGTAGTAGACGTCCTGTAGCAGCCATTGATCATCGTTCTTGCATGAAAAAAGAATCGACCCCTTCCCCTTGATCTGCACTGTGGAAGCGTCGCCGAACTTCACCCGTCCGGTGATCGACTCGTCCAGCTCCCGGAATTTGCTTCGATCGCCGGTCATGTGGTTGCTGGCCCCGTTGTCCAGGAACCAGACATCGCCAGCATGTCCACCAGCGTCTGCCAGCAGCAGCTTGGGCCACACGCGCTGCTCGCGTACGACCAAGCCGCACGACGCGCGCTCTGGCACATCCTCCGTCACCGCAAGCAACAGGGCAGGCCCGGCGTCCTCCGTCTGTGCAAGATGTGCTTCTCCCTTCTTCTTCTTCGGATGTGGGCATTGGTTAGAGTAGTGCCCGTACTCCTCGCAATTGAAGCACTTGATGTGACTCTTGTCACGGCCACCGCCGCCAGAGCCTGCACCTGAGTCGCCCCGCGGCGTCCCGCCGCGTCCGCCTGCGCCACGGCCTCTGCCGCGACCGCGACCGCCCTGGCCGCGCCCAGCACCTTCACCTGAAGGTTTGTTCTTCTGTGGTGGCGAGGATTCCCCGCCGTTCTTCTTGAAGTGAGCTTCCCACTCCGCTTGAGTGAGGAGCACCTGCCCGTCGGTGGTGACCCCGCCGGCGGCAGCCTTCTTCTTCCGCATGCGCTCCTCGTAGGCCTTCAGTCGACCCACTGCCTCCTCAAATGGCATAGTATCAATGTCATAAAATTGCTCAATACCTGCGACGAGGCTGACGAATTTTTCCGGCACCGTGTCGAACAGCTTCTTCACCATCGCGGAATCACCCAGCGTCGAGCCCAACGCCGAGTGACGCACGCTCATCGCGGTGATGCGGCCCGCGTACTGATCCAGAGTTTCCCCTGGCTCCATCACCATGGCACCAAATTCACCCTTCAACGTCTGCAAGCGCGCTTCGCGAACGCGGTCCGCGCCCACGAACCTTGTCTTCAAGCAATCCCACACTTCCTTCGCCGATCTCTTCTTCGCCACCTGCATCAGCAAGTCCTCCGGCTGGGACTGCAACAGATGGGACCTCGCCTTCTTGTCCCTTCTTGGGTCGACGGCCACCCCGGCCGCCGGCTCGATGGCGTCCCAGACACCCTGGTCCTCCATCATCGCCTGAACCCGAATGCACCAGCTGGTGTAGTTCGTTGCCGTGAGTTGTGGGTAGGAGAAAGCACTCCCCGAGCTCCCCCTCGCCGGATCCGCTCCCGCTCCCGCCGGAACCAACGCCAT

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CDS seq

ATGGCGTTGGTTCCGGCGGGAGCGGGAGCGGATCCGGCGAGGGGGAGCTCGGGGAGTGCTTTCTCCTACCCACAACTCACGGCAACGAACTACACCAGCTGGTGCATTCGGGTTCAGGCGATGATGGAGGACCAGGGTGTCTGGGACGCCATCGAGCCGGCGGCCGGGGTGGCCGTCGACCCAAGAAGGGACAAGAAGGCGAGGTCCCATCTGTTGCAGTCCCAGCCGGAGGACTTGCTGATGCAGGTGGCGAAGAAGAGATCGGCGAAGGAAGTGTGGGATTGCTTGAAGACAAGGTTCGTGGGCGCGGACCGCGTTCGCGAAGCGCGCTTGCAGACGTTGAAGGGTGAATTTGGTGCCATGGTGATGGAGCCAGGGGAAACTCTGGATCAGTACGCGGGCCGCATCACCGCGATGAGCGTGCGTCACTCGGCGTTGGGCTCGACGCTGGGTGATTCCGCGATGGTGAAGAAGCTGTTCGACACGGTGCCGGAAAAATTCGTCAGCCTCGTCGCAGGTATTGAGCAATTTTATGACATTGATACTATGCCATTTGAGGAGGCAGTGGGTCGACTGAAGGCCTACGAGGAGCGCATGCGGAAGAAGAAGGCTGCCGCCGGCGGGGTCACCACCGACGGGCAGGTGCTCCTCACTCAAGCGGAGTGGGAAGCTCACTTCAAGAAGAACGGCGGGGAATCCTCGCCACCACAGAAGAACAAACCTTCAGGTGAAGGTGCTGGGCGCGGCCAGGGCGGTCGCGGTCGCGGCAGAGGCCGTGGCGCAGGCGGACGCGGCGGGACGCCGCGGGGCGACTCAGGTGCAGGCTCTGGCGGCGGTGGCCGTGACAAGAGTCACATCAAGTGCTTCAATTGCGAGGAGTACGGGCACTACTCTAACCAATGCCCACATCCGAAGAAGAAGAAGGGAGAAGCACATCTTGCACAGACGGAGGACGCCGGGCCTGCCCTGTTGCTTGCGGTGACGGAGGATGTGCCAGAGCGCGCGTCGTGCGGCTTGGTCGTACGCGAGCAGCGCGTGTGGCCCAAGCTGCTGCTGGCAGACGCTGGTGGACATGCTGGCGATGTCTGGTTCCTGGACAACGGGGCCAGCAACCACATGACCGGCGATCGAAGCAAATTCCGGGAGCTGGACGAGTCGATCACCGGACGGGTGAAGTTCGGCGACGCTTCCACAGTGCAGATCAAGGGGAAGGGGTCGATTCTTTTTTCATGCAAGAACGATGATCAATGGCTGCTACAGGACGTCTACTACATCCCCAGTCTGCAATGTAACATGGTGAGTTTGGGCCAACTAACAGAGACCGGGCATCGCGTGGTCATGGATGAGGATGTACTCGAAGTGTTCGACAAAAGTCCATGGCGGCTGGTGATGAAGCCTCGACGACCCGGCTTGGCTGTGGCATGCGCGGCTGGGACACGTAAATTTTCAAGCAATGAAACTGCTGGTGGACAAGGAGATGGCGGGGGTGTTCCGGCAATCGTCCACCCGAATCAGCTGTGCCAATCTTGCCTGGTGGCGAAACAGGCCAGGGCGCCGTTCCCGGCGGCGGCGCACTTCAGGGCGGAGGAGCCGCTCGAGCTGCTGCACATAGATCTGTGCGGCCCGATTACACCGAATACGATGTCTGGTAATCGCTATTTTTTTCTTATAGTTGATGATTATTCCCGGTGGATATGGGTGTTCGTACTCAAGACGAAGGATCAATCGCTCGATGCTTTCGTAAAGTTCAAGCCACTGGCCGAGAACACGGCTGGGCGGCGCGTGAAGACGTTGCGGTCAGACCGGGGTGGTGAATTCCTGTCAGGCGAGTTTGCACAGGTGTGCGAGGAGGCGGGGATTCAACGTCACCTGACAGCGCCGTACTCGCCCCAGCAAAACGGGGTGGTGGAGAGGCGCAACCGCACGGTGATGGCCATGGCACGCTCACTACTGAAGGGGATGCGCGTACCGGGCAGGTTTTGGGGGGAGGCGGTGCGTCACGCGGTGCATCTCCTTAACCGGCTCCCGACGAAGGCAATGGGTGATCGTACTCCGTTCGAGGCATGGACGGGGAGGAAGCCACAGCTGGGACATCTCAAGGTGTTCGGCTGCACGGCACACGCGAAAAACACGCAGCCGCACCTCAAGAAGCTGGACGACAGGAGTGCACCGTACGTGTATCTCGGTGTGGAGGAAGGGAGCAAGGCTCATCGTCTGTTCGATCCGCGTCGTGGGCGCATACATGTAAGTCGTGACGTTGTATTTGAGGAAAATGTACCTTGGGAGTGGACATCAGCTGCAGGACAGGAGCCAACGGATTTCGCGATGGAGGAGGAGCCTGGTGAGCAGCTGCCGAGCCCGGCAACAGCGGCCGGCGTGGTACCGCCGTACCAGGCACCGTCTCCTGGCAGGCGCGCCGGGAAGGAAGCAGTGGTGGCGGCAGAAGAAGTACCGTCACCGGCAAGCCCGGTGGCAGCATCACCGACTCTGCCTGGAACGCCCACGCCCGGTTCTCCATCGACAAACTCTGCCGGGGTGGTGCCGTCACCGGGCACAGATGACAACATCGATACAGATGATGGGCCTAGGCGGTATAGATCGCTGGCAGATGTCCTGCGTGAGGCCCCGCGTGTGGATTTGGTGGAGGACGAATGTGATGGAGAGGCGCTCCTAGCTGAGTCAGAAGAGCCATCAAGCTATCGAGAAGCTGCCGGCCAACCTGCGTGGGAAGAAGCAATGCAGAGGGAGATGGAGGCAATCGAGAAGAACAAAACGTGGGAGTTGGCCATGTTGCCAGCCGGGCACCGAGCGATTGGGCTGAAATGGGTGTATAAGCTCAAGAAGAACACGGCAGGGGAGATAATCAAGCACAAGGCACGGTTGGTTGCAAAAGGATATGTGCAGAAACAAGGGGTCGATTTTGAAGAGGTGTTTGCTCCGGTAGCGAGGCTTGATACCGTTCGTGTTGTGCTTGCAGTGGCGGCTGATCGCCGCTGGCAGGTTCATCATCTTGATGTCAAATCGGCATTCCTTAATGGTGAACTTGAAGAAGAGGTGTATGTTGCACAACCGGAAGGGTTTGCTAGATCAGGAAAAGAGCATCTTGTGCTCAAGCTGCATAAGGCATTGTATGGACTCCGGCAGGCACCGCGAGCCTGGAATATACGCCTGGACAGAAGCTTGAGGGAGCTCGGCTTTGATCGGTGTACGCAGGAGCAGGCAGTATACACCCGAGGCAGAGGAAGTGATGGCATAATTGTCGGCGTTTACGTTGATGATCTCATTGTCACCGGAGAAAATCCCTCTGAATTGAAGGTTTTCAAGGAACAAATGATGGGGGAGTTTGAGATGAGTGATCTCGGTTTGCTCACATATTATCTCGGGATAGAGGTTGATCAGGATGAGAGTGCTACCACATTGAAACAGACTGCATATGCCAAGAAATTACTGTCTCAGTTTGGGATGATGGAGTGCAACTCAGTTTCAATTCCAATCGATCCGAGATCGCAGCTGAGCAAGGATCCAGAAGGTCACCCGGTGGATGCAACTGAGTATCGGCGGATCATCGGTAGTCTTCGGTATTTGCTTCACACGAGGCCGGATCTGTCATATGCTGTCGGGGTGGCAAGCAGGTTCATGGAGAGGCCAACCGTGATGCATTTCAAGGCTGTGAAGCAAATTCTCAGATACATCAAGGGAACGATGGATTATGGTCTCGTGTATGCTGCAGGCACTGGGGCACTGAAGATTACAGGGTATACTGACAGTGACCTCGCCGGGGACTTGGATGATCGGCGCAGCACTGGTGGAATGGCGTTCTACATCAATCAGAGTCTGGTGGCGTGGAGCTCGCAAAAGCAGAAAACTGTGGCACTATCGTCGTGTGAAGCCGAGTTCATGGCAGCCACGACGGCGGCCTGTCAAGCGCTCTGGTTAAGATTGTTGCTAGCAGAAGTGGCGGGAGTGGAGGAGAAAGCAGTGAAGCTCTTCGTCGACAATAGGTCAGCAATTGCATTGATGAAGAACCCGGTGTTTCATGGGAGAAGTAAGCATATTGACACCCGTTATCACTTCATACGGGAGTGTGTGGATGGCGGGCAAATTGTTGTGGAGTTCGTCCGGACTGAGGAGCAGCGAGCGGATGCACTGACGAAAGGATTGCCGGCGGCGAAGCTGGTGACGGCGAGACACCTTCTTGGTGTTCGTTCACTAGGGTCACGGCAGAATTAA

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Protein seq

MALVPAGAGADPARGSSGSAFSYPQLTATNYTSWCIRVQAMMEDQGVWDAIEPAAGVAVDPRRDKKARSHLLQSQPEDLLMQVAKKRSAKEVWDCLKTRFVGADRVREARLQTLKGEFGAMVMEPGETLDQYAGRITAMSVRHSALGSTLGDSAMVKKLFDTVPEKFVSLVAGIEQFYDIDTMPFEEAVGRLKAYEERMRKKKAAAGGVTTDGQVLLTQAEWEAHFKKNGGESSPPQKNKPSGEGAGRGQGGRGRGRGRGAGGRGGTPRGDSGAGSGGGGRDKSHIKCFNCEEYGHYSNQCPHPKKKKGEAHLAQTEDAGPALLLAVTEDVPERASCGLVVREQRVWPKLLLADAGGHAGDVWFLDNGASNHMTGDRSKFRELDESITGRVKFGDASTVQIKGKGSILFSCKNDDQWLLQDVYYIPSLQCNMVSLGQLTETGHRVVMDEDVLEVFDKSPWRLVMKPRRPGLAVACAAGTRKFSSNETAGGQGDGGGVPAIVHPNQLCQSCLVAKQARAPFPAAAHFRAEEPLELLHIDLCGPITPNTMSGNRYFFLIVDDYSRWIWVFVLKTKDQSLDAFVKFKPLAENTAGRRVKTLRSDRGGEFLSGEFAQVCEEAGIQRHLTAPYSPQQNGVVERRNRTVMAMARSLLKGMRVPGRFWGEAVRHAVHLLNRLPTKAMGDRTPFEAWTGRKPQLGHLKVFGCTAHAKNTQPHLKKLDDRSAPYVYLGVEEGSKAHRLFDPRRGRIHVSRDVVFEENVPWEWTSAAGQEPTDFAMEEEPGEQLPSPATAAGVVPPYQAPSPGRRAGKEAVVAAEEVPSPASPVAASPTLPGTPTPGSPSTNSAGVVPSPGTDDNIDTDDGPRRYRSLADVLREAPRVDLVEDECDGEALLAESEEPSSYREAAGQPAWEEAMQREMEAIEKNKTWELAMLPAGHRAIGLKWVYKLKKNTAGEIIKHKARLVAKGYVQKQGVDFEEVFAPVARLDTVRVVLAVAADRRWQVHHLDVKSAFLNGELEEEVYVAQPEGFARSGKEHLVLKLHKALYGLRQAPRAWNIRLDRSLRELGFDRCTQEQAVYTRGRGSDGIIVGVYVDDLIVTGENPSELKVFKEQMMGEFEMSDLGLLTYYLGIEVDQDESATTLKQTAYAKKLLSQFGMMECNSVSIPIDPRSQLSKDPEGHPVDATEYRRIIGSLRYLLHTRPDLSYAVGVASRFMERPTVMHFKAVKQILRYIKGTMDYGLVYAAGTGALKITGYTDSDLAGDLDDRRSTGGMAFYINQSLVAWSSQKQKTVALSSCEAEFMAATTAACQALWLRLLLAEVAGVEEKAVKLFVDNRSAIALMKNPVFHGRSKHIDTRYHFIRECVDGGQIVVEFVRTEEQRADALTKGLPAAKLVTARHLLGVRSLGSRQN

Function Retrovirus-related Pol polyprotein from transposon TNT 1-94 [UniProtKB/Swiss-Prot:P10978]

Transcripts

Gene Transcript Chromosome Start End Strand Source
LOC_Os03g05850 LOC_Os03g05850.1 Chr03 2937749 2942049 - MSU_osa1r7
CDS seq

ATGGCGTTGGTTCCGGCGGGAGCGGGAGCGGATCCGGCGAGGGGGAGCTCGGGGAGTGCTTTCTCCTACCCACAACTCACGGCAACGAACTACACCAGCTGGTGCATTCGGGTTCAGGCGATGATGGAGGACCAGGGTGTCTGGGACGCCATCGAGCCGGCGGCCGGGGTGGCCGTCGACCCAAGAAGGGACAAGAAGGCGAGGTCCCATCTGTTGCAGTCCCAGCCGGAGGACTTGCTGATGCAGGTGGCGAAGAAGAGATCGGCGAAGGAAGTGTGGGATTGCTTGAAGACAAGGTTCGTGGGCGCGGACCGCGTTCGCGAAGCGCGCTTGCAGACGTTGAAGGGTGAATTTGGTGCCATGGTGATGGAGCCAGGGGAAACTCTGGATCAGTACGCGGGCCGCATCACCGCGATGAGCGTGCGTCACTCGGCGTTGGGCTCGACGCTGGGTGATTCCGCGATGGTGAAGAAGCTGTTCGACACGGTGCCGGAAAAATTCGTCAGCCTCGTCGCAGGTATTGAGCAATTTTATGACATTGATACTATGCCATTTGAGGAGGCAGTGGGTCGACTGAAGGCCTACGAGGAGCGCATGCGGAAGAAGAAGGCTGCCGCCGGCGGGGTCACCACCGACGGGCAGGTGCTCCTCACTCAAGCGGAGTGGGAAGCTCACTTCAAGAAGAACGGCGGGGAATCCTCGCCACCACAGAAGAACAAACCTTCAGGTGAAGGTGCTGGGCGCGGCCAGGGCGGTCGCGGTCGCGGCAGAGGCCGTGGCGCAGGCGGACGCGGCGGGACGCCGCGGGGCGACTCAGGTGCAGGCTCTGGCGGCGGTGGCCGTGACAAGAGTCACATCAAGTGCTTCAATTGCGAGGAGTACGGGCACTACTCTAACCAATGCCCACATCCGAAGAAGAAGAAGGGAGAAGCACATCTTGCACAGACGGAGGACGCCGGGCCTGCCCTGTTGCTTGCGGTGACGGAGGATGTGCCAGAGCGCGCGTCGTGCGGCTTGGTCGTACGCGAGCAGCGCGTGTGGCCCAAGCTGCTGCTGGCAGACGCTGGTGGACATGCTGGCGATGTCTGGTTCCTGGACAACGGGGCCAGCAACCACATGACCGGCGATCGAAGCAAATTCCGGGAGCTGGACGAGTCGATCACCGGACGGGTGAAGTTCGGCGACGCTTCCACAGTGCAGATCAAGGGGAAGGGGTCGATTCTTTTTTCATGCAAGAACGATGATCAATGGCTGCTACAGGACGTCTACTACATCCCCAGTCTGCAATGTAACATGGTGAGTTTGGGCCAACTAACAGAGACCGGGCATCGCGTGGTCATGGATGAGGATGTACTCGAAGTGTTCGACAAAAGTCCATGGCGGCTGGTGATGAAGCCTCGACGACCCGGCTTGGCTGTGGCATGCGCGGCTGGGACACGTAAATTTTCAAGCAATGAAACTGCTGGTGGACAAGGAGATGGCGGGGGTGTTCCGGCAATCGTCCACCCGAATCAGCTGTGCCAATCTTGCCTGGTGGCGAAACAGGCCAGGGCGCCGTTCCCGGCGGCGGCGCACTTCAGGGCGGAGGAGCCGCTCGAGCTGCTGCACATAGATCTGTGCGGCCCGATTACACCGAATACGATGTCTGGTAATCGCTATTTTTTTCTTATAGTTGATGATTATTCCCGGTGGATATGGGTGTTCGTACTCAAGACGAAGGATCAATCGCTCGATGCTTTCGTAAAGTTCAAGCCACTGGCCGAGAACACGGCTGGGCGGCGCGTGAAGACGTTGCGGTCAGACCGGGGTGGTGAATTCCTGTCAGGCGAGTTTGCACAGGTGTGCGAGGAGGCGGGGATTCAACGTCACCTGACAGCGCCGTACTCGCCCCAGCAAAACGGGGTGGTGGAGAGGCGCAACCGCACGGTGATGGCCATGGCACGCTCACTACTGAAGGGGATGCGCGTACCGGGCAGGTTTTGGGGGGAGGCGGTGCGTCACGCGGTGCATCTCCTTAACCGGCTCCCGACGAAGGCAATGGGTGATCGTACTCCGTTCGAGGCATGGACGGGGAGGAAGCCACAGCTGGGACATCTCAAGGTGTTCGGCTGCACGGCACACGCGAAAAACACGCAGCCGCACCTCAAGAAGCTGGACGACAGGAGTGCACCGTACGTGTATCTCGGTGTGGAGGAAGGGAGCAAGGCTCATCGTCTGTTCGATCCGCGTCGTGGGCGCATACATGTAAGTCGTGACGTTGTATTTGAGGAAAATGTACCTTGGGAGTGGACATCAGCTGCAGGACAGGAGCCAACGGATTTCGCGATGGAGGAGGAGCCTGGTGAGCAGCTGCCGAGCCCGGCAACAGCGGCCGGCGTGGTACCGCCGTACCAGGCACCGTCTCCTGGCAGGCGCGCCGGGAAGGAAGCAGTGGTGGCGGCAGAAGAAGTACCGTCACCGGCAAGCCCGGTGGCAGCATCACCGACTCTGCCTGGAACGCCCACGCCCGGTTCTCCATCGACAAACTCTGCCGGGGTGGTGCCGTCACCGGGCACAGATGACAACATCGATACAGATGATGGGCCTAGGCGGTATAGATCGCTGGCAGATGTCCTGCGTGAGGCCCCGCGTGTGGATTTGGTGGAGGACGAATGTGATGGAGAGGCGCTCCTAGCTGAGTCAGAAGAGCCATCAAGCTATCGAGAAGCTGCCGGCCAACCTGCGTGGGAAGAAGCAATGCAGAGGGAGATGGAGGCAATCGAGAAGAACAAAACGTGGGAGTTGGCCATGTTGCCAGCCGGGCACCGAGCGATTGGGCTGAAATGGGTGTATAAGCTCAAGAAGAACACGGCAGGGGAGATAATCAAGCACAAGGCACGGTTGGTTGCAAAAGGATATGTGCAGAAACAAGGGGTCGATTTTGAAGAGGTGTTTGCTCCGGTAGCGAGGCTTGATACCGTTCGTGTTGTGCTTGCAGTGGCGGCTGATCGCCGCTGGCAGGTTCATCATCTTGATGTCAAATCGGCATTCCTTAATGGTGAACTTGAAGAAGAGGTGTATGTTGCACAACCGGAAGGGTTTGCTAGATCAGGAAAAGAGCATCTTGTGCTCAAGCTGCATAAGGCATTGTATGGACTCCGGCAGGCACCGCGAGCCTGGAATATACGCCTGGACAGAAGCTTGAGGGAGCTCGGCTTTGATCGGTGTACGCAGGAGCAGGCAGTATACACCCGAGGCAGAGGAAGTGATGGCATAATTGTCGGCGTTTACGTTGATGATCTCATTGTCACCGGAGAAAATCCCTCTGAATTGAAGGTTTTCAAGGAACAAATGATGGGGGAGTTTGAGATGAGTGATCTCGGTTTGCTCACATATTATCTCGGGATAGAGGTTGATCAGGATGAGAGTGCTACCACATTGAAACAGACTGCATATGCCAAGAAATTACTGTCTCAGTTTGGGATGATGGAGTGCAACTCAGTTTCAATTCCAATCGATCCGAGATCGCAGCTGAGCAAGGATCCAGAAGGTCACCCGGTGGATGCAACTGAGTATCGGCGGATCATCGGTAGTCTTCGGTATTTGCTTCACACGAGGCCGGATCTGTCATATGCTGTCGGGGTGGCAAGCAGGTTCATGGAGAGGCCAACCGTGATGCATTTCAAGGCTGTGAAGCAAATTCTCAGATACATCAAGGGAACGATGGATTATGGTCTCGTGTATGCTGCAGGCACTGGGGCACTGAAGATTACAGGGTATACTGACAGTGACCTCGCCGGGGACTTGGATGATCGGCGCAGCACTGGTGGAATGGCGTTCTACATCAATCAGAGTCTGGTGGCGTGGAGCTCGCAAAAGCAGAAAACTGTGGCACTATCGTCGTGTGAAGCCGAGTTCATGGCAGCCACGACGGCGGCCTGTCAAGCGCTCTGGTTAAGATTGTTGCTAGCAGAAGTGGCGGGAGTGGAGGAGAAAGCAGTGAAGCTCTTCGTCGACAATAGGTCAGCAATTGCATTGATGAAGAACCCGGTGTTTCATGGGAGAAGTAAGCATATTGACACCCGTTATCACTTCATACGGGAGTGTGTGGATGGCGGGCAAATTGTTGTGGAGTTCGTCCGGACTGAGGAGCAGCGAGCGGATGCACTGACGAAAGGATTGCCGGCGGCGAAGCTGGTGACGGCGAGACACCTTCTTGGTGTTCGTTCACTAGGGTCACGGCAGAATTAA

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Protein seq

MALVPAGAGADPARGSSGSAFSYPQLTATNYTSWCIRVQAMMEDQGVWDAIEPAAGVAVDPRRDKKARSHLLQSQPEDLLMQVAKKRSAKEVWDCLKTRFVGADRVREARLQTLKGEFGAMVMEPGETLDQYAGRITAMSVRHSALGSTLGDSAMVKKLFDTVPEKFVSLVAGIEQFYDIDTMPFEEAVGRLKAYEERMRKKKAAAGGVTTDGQVLLTQAEWEAHFKKNGGESSPPQKNKPSGEGAGRGQGGRGRGRGRGAGGRGGTPRGDSGAGSGGGGRDKSHIKCFNCEEYGHYSNQCPHPKKKKGEAHLAQTEDAGPALLLAVTEDVPERASCGLVVREQRVWPKLLLADAGGHAGDVWFLDNGASNHMTGDRSKFRELDESITGRVKFGDASTVQIKGKGSILFSCKNDDQWLLQDVYYIPSLQCNMVSLGQLTETGHRVVMDEDVLEVFDKSPWRLVMKPRRPGLAVACAAGTRKFSSNETAGGQGDGGGVPAIVHPNQLCQSCLVAKQARAPFPAAAHFRAEEPLELLHIDLCGPITPNTMSGNRYFFLIVDDYSRWIWVFVLKTKDQSLDAFVKFKPLAENTAGRRVKTLRSDRGGEFLSGEFAQVCEEAGIQRHLTAPYSPQQNGVVERRNRTVMAMARSLLKGMRVPGRFWGEAVRHAVHLLNRLPTKAMGDRTPFEAWTGRKPQLGHLKVFGCTAHAKNTQPHLKKLDDRSAPYVYLGVEEGSKAHRLFDPRRGRIHVSRDVVFEENVPWEWTSAAGQEPTDFAMEEEPGEQLPSPATAAGVVPPYQAPSPGRRAGKEAVVAAEEVPSPASPVAASPTLPGTPTPGSPSTNSAGVVPSPGTDDNIDTDDGPRRYRSLADVLREAPRVDLVEDECDGEALLAESEEPSSYREAAGQPAWEEAMQREMEAIEKNKTWELAMLPAGHRAIGLKWVYKLKKNTAGEIIKHKARLVAKGYVQKQGVDFEEVFAPVARLDTVRVVLAVAADRRWQVHHLDVKSAFLNGELEEEVYVAQPEGFARSGKEHLVLKLHKALYGLRQAPRAWNIRLDRSLRELGFDRCTQEQAVYTRGRGSDGIIVGVYVDDLIVTGENPSELKVFKEQMMGEFEMSDLGLLTYYLGIEVDQDESATTLKQTAYAKKLLSQFGMMECNSVSIPIDPRSQLSKDPEGHPVDATEYRRIIGSLRYLLHTRPDLSYAVGVASRFMERPTVMHFKAVKQILRYIKGTMDYGLVYAAGTGALKITGYTDSDLAGDLDDRRSTGGMAFYINQSLVAWSSQKQKTVALSSCEAEFMAATTAACQALWLRLLLAEVAGVEEKAVKLFVDNRSAIALMKNPVFHGRSKHIDTRYHFIRECVDGGQIVVEFVRTEEQRADALTKGLPAAKLVTARHLLGVRSLGSRQN

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.0 0.0 0.0

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_03g028509A RBH 0.326278 1.889491 0.000000
Nipponbare | IRGSP 1.0 | MSU LOC_Os07g05430 SBH 0.0 0.0 0.017853
Nipponbare | IRGSP 1.0 | RAP-db Os08g0125300 SBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) NA NA NA NA NA
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) NA NA NA NA NA
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) NA NA NA NA NA
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) NA NA NA NA NA
PR 106 | Os127742RS1 | Gramene(+IsoSeq) NA NA NA NA NA
Minghui 63 | MH63RS3 | HZAU OsMH63_03G0030700 SBH 0.005467 0.0143905 0.003927
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) NA NA NA NA NA
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_03G0218600 RBH 0.0027225 0.007356 0
LIMA | Os127564RS1 | Gramene(+IsoSeq) NA NA NA NA NA
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) NA NA NA NA NA
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) NA NA NA NA NA
LIU XU | Os125827RS1 | Gramene(+IsoSeq) NA NA NA NA NA
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) NA NA NA NA NA
N22 | OsN22RS2 | Gramene(+IsoSeq) NA NA NA NA NA
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) NA NA NA NA NA
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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