Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os02g56370 | OGI:02097290 | 16/16 | Nipponbare | IRGSP 1.0 | MSU | Chr02:34509523-34512674 | ||||||||
| Gene Symbol | WAK20, OsWAK20 | ||||||||||
| DNA seq | GAAGGTAATGTGATTGCATAAATTATCAACATAATACAAAGGTTAATTTCATGCGCCTGGAAGAAAGATGACAAAAATACACATTCAGATGAACATCAACAAAACACGGTTGTGCATATAGCTTTGGACCGCGTGCCTTTCATACCTTGTACATTGTGACAACGCTTTATATTTTAAAAAAATTTCCACTACCTGGGATACCTTGAAGAGAGCAAGTACTCTTCTTCAAGGCTATACTGTTTTGTCGACTCCATACTTGTGCCTTCATTTGCCGGGTAACTCATTGAGACATGATTCTCCTTAGAACTTTTATTGGCCATGCTATGTATAGCTTCTTGCTGCAGAAACAATGATCTTATGCTTTCAAGTGTCATTTCCACCTGTCTCATAGTGGGCCGCTCCTCTGCTTTCAGCTTGACACATGCCACAGCTAACAAAGCTACTTCTTTAACTTCTTTTCCTCCCTCTTCCACGACTTGAGGATCAAGTATGTGACCCAAGTTGTCACGTGTGAGTAGCGTAGTGAAATGCGAAACAAGACCGTCATCCTCAGGTGATCTGTATGAGTATGGTTTTTTCCTAGTAAGTAACTCTATTAGAACAACACCAAAGCTAAAAACGTCGCTCTTCTCGGTGAGACGTCCCGTGTAAGAGTACATGGGGTCTAAGTATCCTAGTGTTCCTTGAATAACAGTTGTGACTCCTGTCTGTTCAGCAGGAATACACCTTGAAGCTCCAAAGTCTGATACTTTTGCTGTTAGGGAGCCATCTAATAAGATGTTATGGGACTTGATGTCCCTGTGAATTATGGGGAATGATACAGCCGAGTGAAGGTAGCCGAGGGCTCTAGCTGTTTCAGTTGCAATTCTGAGTCTATCTTCCCATGACAATGATAATGGCCCTTCAACATGAAGATGGTGGTAAAGGGTACCATTCGATATGAATTCATAAATCAACAATGACACTTCTGTCTCTAGGCAACATCCAAAAAGTTTCACCACATTGCGATGGTTAATCTGTGAGAGAATGGCTACCTCGTTTATGAACTCATCAATCTCTCTTTGGATTGCTACCTTTGATTTCTTGATCGCAACAACATGAAGATCCGATAGAATCCCTTTATAAACGGTGCCGTGCCCTCCTCCTCCAATCTCACGAGATTCATCAAATTTGTTTGTGGCTTTTTCCAGTTCTGCTAAGGGGATGATCATCCTTTCAGCAATGTCGGTATTTTGAGATACCAATTGTTGCAACAAATGCCCACGGTTCTGCTTAAAGAACATCTGTCTAAGCATGTTTGCTCTACGATTCTTGATCTTACGTGTTAAAAAGACTGCACCGAATGCCATGGCCAAAAGCCCCGCACCACTGCCAACTCCAATACCAATAGTTAAACCTGGAGCACAATAGAAGGGAAAAAAAGTTTTCTTCATTAGAGAGGCGTACTGAATTTGTTTGTAATTGAGAACCGTTAGTGCCAGTACTTGCCGAACAGTTGGTTAATAAGAAATCAGCCTTATGGAAATATTAGCCTGTAAAAACATCGTAGTCTGCTTTTGTTTGTTTATGGAACAGAGTAATTTGTGCTGGTACTTGGCCGAACAATCGACTGTTCTCTCCAACAAAACAACCCCGTCGTTTGGCTTATTTACAAACGAAAAAGAATTTATGAATAAAACTTTTATATACATATTCTTAACTCTTAACGATCTAGAAGCAAAGACTGAAAAATAAACTACGATAAAAAAATCCTAAAATCAACTCAAAATTTAAAGTTGAAAATTCAAATTTTGCAACTTTAAATTTTGACTCATAAGTATAAGCATAAGTGAAAATATAAGGGCGAAAATTCCGTTGCACATTATAGCTAGCACACTCTCAAGTCTCAGGTAGATTAGTTTAGCATCTTCAATTAATTTAGATGTCTGGATAAATTCCAAAATGATAAGAAGATTAATTTAGTTACCTAGATCAGTTTTGACGCAGCCTTTTTCAATGAGCGGGTTACCACGAGCACCTGGCGGGCACATGCACAAGTACCCTCCTAGCGTGTTGGTGCACTTGTTGCCGAAGCATGCGTCCTTATCTCGCTCGCACTCGTCGATGTCTTCGCGAATCGCCCAAATCGACGGGAATTAGCTTTTGAACTCACTGTTAAAATGGAGTTTATTTCACGGGAGGCGTTTTTAATTTTGTACCTTGGCATCCACCGTCGAGGTAGGGGTTCCCCTCGTAGCCCCTGGAGCAGTTGCAGCGGTAGCCTTCTCCCTCGGTGGAGTCGACGCAGTCGCTGTTGGCGCTCCGGCACGCGTAGTCCGCCTTGTTGCGCATGGCGGCTTCGCAGCTGCCGACTTCCCGGATGGCCCAATCCAGCACGACGGGCACGGCGAAGTCGCCGGTCCGGTTGAAGTCACCGCGGTAGCTGGTACTGAGCCACTCGGCGTCCGCCAAGAACACGTAGCGGTAATCAGTGGCGGCATAATACTGAAGGGTGACGTTCTTGGGCTTGTCCTGGTTCACGTAGTAGGTGTGGAGACCGGAGGGTATCGAGCTCTGGCAGCATCCCACGCCGGCGCACGCCCCTGCTGACACGGCGAGCGGCGACGACCGGCACAGGGATATGCAACCGGTCACGTAATTTTCTGTGGCGTCTAATAGAAGGCCGAGGTTGGGGCAGCCGAGTGCGACGAAACGGTTCTTGGCCGACGAGAAGCGGTAAGGGCCTTCCCGTCCCAAGAACAAGTACACGACGTCGTTTGTGCGGACGAGGTCCCCCGTGCTGTGGTTGTACAAGCTCCGCGACGCGTTGTTGTATATCCGGGCCTCACCATCGGCGAGGGACAGGCTTTCGAGATGGATCTCCAAATTGGATTGGGAATCGATGACGGCGATGAGGCGCGGAGGGGAGTAGGTGTGGTTGCACTCGAGCTGGAATTTGGGCCCGCGGGCACAGACGGCGCCGATGCCGAAGGGGTAGGGGATGCTGATGTTGCCGCACTTGTCAGGGCAGCCAGGCAATGGCTGAGCCGACGCTGGTGTCGCCGGCGCCAGGGCCATGCCTAACAGCAAGACTACGGCTGAGATGGCGACACCCGGCTGCAGGTGCCTTATCTCTGACATCCTACCTTAGCTAACTCTTTGCCCGTTTCTCT
More
|
||||||||||
| CDS seq | ATGTCAGAGATAAGGCACCTGCAGCCGGGTGTCGCCATCTCAGCCGTAGTCTTGCTGTTAGGCATGGCCCTGGCGCCGGCGACACCAGCGTCGGCTCAGCCATTGCCTGGCTGCCCTGACAAGTGCGGCAACATCAGCATCCCCTACCCCTTCGGCATCGGCGCCGTCTGTGCCCGCGGGCCCAAATTCCAGCTCGAGTGCAACCACACCTACTCCCCTCCGCGCCTCATCGCCGTCATCGATTCCCAATCCAATTTGGAGATCCATCTCGAAAGCCTGTCCCTCGCCGATGGTGAGGCCCGGATATACAACAACGCGTCGCGGAGCTTGTACAACCACAGCACGGGGGACCTCGTCCGCACAAACGACGTCGTGTACTTGTTCTTGGGACGGGAAGGCCCTTACCGCTTCTCGTCGGCCAAGAACCGTTTCGTCGCACTCGGCTGCCCCAACCTCGGCCTTCTATTAGACGCCACAGAAAATTACGTGACCGGTTGCATATCCCTGTGCCGGTCGTCGCCGCTCGCCGTGTCAGCAGGGGCGTGCGCCGGCGTGGGATGCTGCCAGAGCTCGATACCCTCCGGTCTCCACACCTACTACGTGAACCAGGACAAGCCCAAGAACGTCACCCTTCAGTATTATGCCGCCACTGATTACCGCTACGTGTTCTTGGCGGACGCCGAGTGGCTCAGTACCAGCTACCGCGGTGACTTCAACCGGACCGGCGACTTCGCCGTGCCCGTCGTGCTGGATTGGGCCATCCGGGAAGTCGGCAGCTGCGAAGCCGCCATGCGCAACAAGGCGGACTACGCGTGCCGGAGCGCCAACAGCGACTGCGTCGACTCCACCGAGGGAGAAGGCTACCGCTGCAACTGCTCCAGGGGCTACGAGGGGAACCCCTACCTCGACGGTGGATGCCAAGACATCGACGAGTGCGAGCGAGATAAGGACGCATGCTTCGGCAACAAGTGCACCAACACGCTAGGAGGGTACTTGTGCATGTGCCCGCCAGGTGCTCGTGGTAACCCGCTCATTGAAAAAGGCTGCGTCAAAACTGATCTAGGTTTAACTATTGGTATTGGAGTTGGCAGTGGTGCGGGGCTTTTGGCCATGGCATTCGGTGCAGTCTTTTTAACACGTAAGATCAAGAATCGTAGAGCAAACATGCTTAGACAGATGTTCTTTAAGCAGAACCGTGGGCATTTGTTGCAACAATTGGTATCTCAAAATACCGACATTGCTGAAAGGATGATCATCCCCTTAGCAGAACTGGAAAAAGCCACAAACAAATTTGATGAATCTCGTGAGATTGGAGGAGGAGGGCACGGCACCGTTTATAAAGGGATTCTATCGGATCTTCATGTTGTTGCGATCAAGAAATCAAAGGTAGCAATCCAAAGAGAGATTGATGAGTTCATAAACGAGGTAGCCATTCTCTCACAGATTAACCATCGCAATGTGGTGAAACTTTTTGGATGTTGCCTAGAGACAGAAGTGTCATTGTTGATTTATGAATTCATATCGAATGGTACCCTTTACCACCATCTTCATGTTGAAGGGCCATTATCATTGTCATGGGAAGATAGACTCAGAATTGCAACTGAAACAGCTAGAGCCCTCGGCTACCTTCACTCGGCTGTATCATTCCCCATAATTCACAGGGACATCAAGTCCCATAACATCTTATTAGATGGCTCCCTAACAGCAAAAGTATCAGACTTTGGAGCTTCAAGGTGTATTCCTGCTGAACAGACAGGAGTCACAACTGTTATTCAAGGAACACTAGGATACTTAGACCCCATGTACTCTTACACGGGACGTCTCACCGAGAAGAGCGACGTTTTTAGCTTTGGTGTTGTTCTAATAGAGTTACTTACTAGGAAAAAACCATACTCATACAGATCACCTGAGGATGACGGTCTTGTTTCGCATTTCACTACGCTACTCACACGTGACAACTTGGGTCACATACTTGATCCTCAAGTCGTGGAAGAGGGAGGAAAAGAAGTTAAAGAAGTAGCTTTGTTAGCTGTGGCATGTGTCAAGCTGAAAGCAGAGGAGCGGCCCACTATGAGACAGGTGGAAATGACACTTGAAAGCATAAGATCATTGTTTCTGCAGCAAGAAGCTATACATAGCATGGCCAATAAAAGTTCTAAGGAGAATCATGTCTCAATGAGTTACCCGGCAAATGAAGGCACAAGTATGGAGTCGACAAAACAGTATAGCCTTGAAGAAGAGTACTTGCTCTCTTCAAGGTATCCCAGGTAG
More
|
||||||||||
| Protein seq | MSEIRHLQPGVAISAVVLLLGMALAPATPASAQPLPGCPDKCGNISIPYPFGIGAVCARGPKFQLECNHTYSPPRLIAVIDSQSNLEIHLESLSLADGEARIYNNASRSLYNHSTGDLVRTNDVVYLFLGREGPYRFSSAKNRFVALGCPNLGLLLDATENYVTGCISLCRSSPLAVSAGACAGVGCCQSSIPSGLHTYYVNQDKPKNVTLQYYAATDYRYVFLADAEWLSTSYRGDFNRTGDFAVPVVLDWAIREVGSCEAAMRNKADYACRSANSDCVDSTEGEGYRCNCSRGYEGNPYLDGGCQDIDECERDKDACFGNKCTNTLGGYLCMCPPGARGNPLIEKGCVKTDLGLTIGIGVGSGAGLLAMAFGAVFLTRKIKNRRANMLRQMFFKQNRGHLLQQLVSQNTDIAERMIIPLAELEKATNKFDESREIGGGGHGTVYKGILSDLHVVAIKKSKVAIQREIDEFINEVAILSQINHRNVVKLFGCCLETEVSLLIYEFISNGTLYHHLHVEGPLSLSWEDRLRIATETARALGYLHSAVSFPIIHRDIKSHNILLDGSLTAKVSDFGASRCIPAEQTGVTTVIQGTLGYLDPMYSYTGRLTEKSDVFSFGVVLIELLTRKKPYSYRSPEDDGLVSHFTTLLTRDNLGHILDPQVVEEGGKEVKEVALLAVACVKLKAEERPTMRQVEMTLESIRSLFLQQEAIHSMANKSSKENHVSMSYPANEGTSMESTKQYSLEEEYLLSSRYPR |
||||||||||
| Function | Wall-associated receptor kinase 5 [UniProtKB/Swiss-Prot:Q9LMN7] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os02g56370 | LOC_Os02g56370.1 | Chr02 | 34509523 | 34512674 | - | MSU_osa1r7 | ||
| CDS seq | ATGTCAGAGATAAGGCACCTGCAGCCGGGTGTCGCCATCTCAGCCGTAGTCTTGCTGTTAGGCATGGCCCTGGCGCCGGCGACACCAGCGTCGGCTCAGCCATTGCCTGGCTGCCCTGACAAGTGCGGCAACATCAGCATCCCCTACCCCTTCGGCATCGGCGCCGTCTGTGCCCGCGGGCCCAAATTCCAGCTCGAGTGCAACCACACCTACTCCCCTCCGCGCCTCATCGCCGTCATCGATTCCCAATCCAATTTGGAGATCCATCTCGAAAGCCTGTCCCTCGCCGATGGTGAGGCCCGGATATACAACAACGCGTCGCGGAGCTTGTACAACCACAGCACGGGGGACCTCGTCCGCACAAACGACGTCGTGTACTTGTTCTTGGGACGGGAAGGCCCTTACCGCTTCTCGTCGGCCAAGAACCGTTTCGTCGCACTCGGCTGCCCCAACCTCGGCCTTCTATTAGACGCCACAGAAAATTACGTGACCGGTTGCATATCCCTGTGCCGGTCGTCGCCGCTCGCCGTGTCAGCAGGGGCGTGCGCCGGCGTGGGATGCTGCCAGAGCTCGATACCCTCCGGTCTCCACACCTACTACGTGAACCAGGACAAGCCCAAGAACGTCACCCTTCAGTATTATGCCGCCACTGATTACCGCTACGTGTTCTTGGCGGACGCCGAGTGGCTCAGTACCAGCTACCGCGGTGACTTCAACCGGACCGGCGACTTCGCCGTGCCCGTCGTGCTGGATTGGGCCATCCGGGAAGTCGGCAGCTGCGAAGCCGCCATGCGCAACAAGGCGGACTACGCGTGCCGGAGCGCCAACAGCGACTGCGTCGACTCCACCGAGGGAGAAGGCTACCGCTGCAACTGCTCCAGGGGCTACGAGGGGAACCCCTACCTCGACGGTGGATGCCAAGACATCGACGAGTGCGAGCGAGATAAGGACGCATGCTTCGGCAACAAGTGCACCAACACGCTAGGAGGGTACTTGTGCATGTGCCCGCCAGGTGCTCGTGGTAACCCGCTCATTGAAAAAGGCTGCGTCAAAACTGATCTAGGTTTAACTATTGGTATTGGAGTTGGCAGTGGTGCGGGGCTTTTGGCCATGGCATTCGGTGCAGTCTTTTTAACACGTAAGATCAAGAATCGTAGAGCAAACATGCTTAGACAGATGTTCTTTAAGCAGAACCGTGGGCATTTGTTGCAACAATTGGTATCTCAAAATACCGACATTGCTGAAAGGATGATCATCCCCTTAGCAGAACTGGAAAAAGCCACAAACAAATTTGATGAATCTCGTGAGATTGGAGGAGGAGGGCACGGCACCGTTTATAAAGGGATTCTATCGGATCTTCATGTTGTTGCGATCAAGAAATCAAAGGTAGCAATCCAAAGAGAGATTGATGAGTTCATAAACGAGGTAGCCATTCTCTCACAGATTAACCATCGCAATGTGGTGAAACTTTTTGGATGTTGCCTAGAGACAGAAGTGTCATTGTTGATTTATGAATTCATATCGAATGGTACCCTTTACCACCATCTTCATGTTGAAGGGCCATTATCATTGTCATGGGAAGATAGACTCAGAATTGCAACTGAAACAGCTAGAGCCCTCGGCTACCTTCACTCGGCTGTATCATTCCCCATAATTCACAGGGACATCAAGTCCCATAACATCTTATTAGATGGCTCCCTAACAGCAAAAGTATCAGACTTTGGAGCTTCAAGGTGTATTCCTGCTGAACAGACAGGAGTCACAACTGTTATTCAAGGAACACTAGGATACTTAGACCCCATGTACTCTTACACGGGACGTCTCACCGAGAAGAGCGACGTTTTTAGCTTTGGTGTTGTTCTAATAGAGTTACTTACTAGGAAAAAACCATACTCATACAGATCACCTGAGGATGACGGTCTTGTTTCGCATTTCACTACGCTACTCACACGTGACAACTTGGGTCACATACTTGATCCTCAAGTCGTGGAAGAGGGAGGAAAAGAAGTTAAAGAAGTAGCTTTGTTAGCTGTGGCATGTGTCAAGCTGAAAGCAGAGGAGCGGCCCACTATGAGACAGGTGGAAATGACACTTGAAAGCATAAGATCATTGTTTCTGCAGCAAGAAGCTATACATAGCATGGCCAATAAAAGTTCTAAGGAGAATCATGTCTCAATGAGTTACCCGGCAAATGAAGGCACAAGTATGGAGTCGACAAAACAGTATAGCCTTGAAGAAGAGTACTTGCTCTCTTCAAGGTATCCCAGGTAG
More
|
|||||||
| Protein seq | MSEIRHLQPGVAISAVVLLLGMALAPATPASAQPLPGCPDKCGNISIPYPFGIGAVCARGPKFQLECNHTYSPPRLIAVIDSQSNLEIHLESLSLADGEARIYNNASRSLYNHSTGDLVRTNDVVYLFLGREGPYRFSSAKNRFVALGCPNLGLLLDATENYVTGCISLCRSSPLAVSAGACAGVGCCQSSIPSGLHTYYVNQDKPKNVTLQYYAATDYRYVFLADAEWLSTSYRGDFNRTGDFAVPVVLDWAIREVGSCEAAMRNKADYACRSANSDCVDSTEGEGYRCNCSRGYEGNPYLDGGCQDIDECERDKDACFGNKCTNTLGGYLCMCPPGARGNPLIEKGCVKTDLGLTIGIGVGSGAGLLAMAFGAVFLTRKIKNRRANMLRQMFFKQNRGHLLQQLVSQNTDIAERMIIPLAELEKATNKFDESREIGGGGHGTVYKGILSDLHVVAIKKSKVAIQREIDEFINEVAILSQINHRNVVKLFGCCLETEVSLLIYEFISNGTLYHHLHVEGPLSLSWEDRLRIATETARALGYLHSAVSFPIIHRDIKSHNILLDGSLTAKVSDFGASRCIPAEQTGVTTVIQGTLGYLDPMYSYTGRLTEKSDVFSFGVVLIELLTRKKPYSYRSPEDDGLVSHFTTLLTRDNLGHILDPQVVEEGGKEVKEVALLAVACVKLKAEERPTMRQVEMTLESIRSLFLQQEAIHSMANKSSKENHVSMSYPANEGTSMESTKQYSLEEEYLLSSRYPR
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.066279 | 0.135206 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0807800 | RBH | 0.098050 | 0.201105 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0807800 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0037960 | RBH | 0.0 | 11.612861 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0037950 | SBH | 0.041633 | 3.596354 | 0.069236 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0037860 | RBH | 0.0 | 8.725663 | 0.000000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0037520 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0025790 | SBH | 1.948071 | 0.0 | 0.463558 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0564700 | RBH | 0.228422 | 4.0404505 | 0.0986735 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0037300 | SBH | 0.038682 | 0.386035 | 0.225111 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0595500 | RBH | 0.7794885 | 5.120384 | 0.403595 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0037580 | RBH | 0.014462 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0037510 | SBH | 0.027594 | 1.515061 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0037650 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0037620 | RBH | 0.159828 | 0.313837 | 0.092789 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0037270 | SBH | 0.012833 | 2.010251 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G037950 | SBH | 0.0 | 0.000000 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0025890 | SBH | 0.0 | 0.0 | 0.0 |
