Basic Info |
Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
LOC_Os02g54900 | OGI:02094990 | 16/16 | Nipponbare | IRGSP 1.0 | MSU | Chr02:33623756-33630043 | ||||||||
Gene Symbol | - | ||||||||||
DNA seq | ATGATCCAACCTCCCCCAATCTCTCTCTCTCTCTCTCTCTCGCTCCCCTCCGCAACGCGCGACCTCACACGTCCCCCTCTTCCCGCTCTTCCTCCTCCTCCCCCTCCTCGCCTCCACTTCCACCTCGAAATCCCTCCTCCAATTCCAGCGCCCCGTCCCCGTACGCTTCGTCGATCGGCGGTGGATGCGGGTGGGGGTGGTGGTGGTAGGGAAGGGGCGATCGATCGAGCATGGCCAAGGCGTGGGAGAAGGTGGCGACGGCGGCGGGGTTGGGTGGGTCGGGGGAGAGGCGCAAGTACCCGATCCGCGTGGAGGACTACGAGCTGTACGAGGAGATCGGGCAGGGGGTCAGCGCCATCGTGTACCGATCGCTCTGCAAGCCCCTCGACGAGATCGTCGCCGTCAAGGTGCTCGACTTCGAGCGCACAAACAGTGACCTGGTACGTTTGCGCGTACATCATCTCCAATTCGTTTGTTGGGCCCAATCCTGCGTAGAGGGAGAGAGATCCATCGTCTCGCTTAATTAACCTGTTTGATTTGCAGATTAATTAAACTATTATCCTCCGGTGCATTTTAATTTTTACAAATGTACTTGTGGATGATATTGTCCAACGGTCGGTTGGTCCAATGAGTCGCATACTATCGTATCGAAAATTTTCATATATTATTTCTGTTGTCTTACAGTTAATTATAGCTCAAATTTTTTTTGCTGACTGCATTCATGTCAGATTGTTGCAGTGGTTAGTTGTAATGCAAGTAGGTTATACTCGGATTGTTGCGATTTACGTACCGCCGCTTGATCTGTCTAAAATGATAGTAACACGGATATGCTTGACGCAGAACAACATCATGCGTGAAGCTCAGACGATGATTCTCATAGATCAGCCTAACGTCATGAAGGCACATTGTTCATTTACAAATAACCACTCGTTGTGGGTGGTCATGCCATACATGGCTGGAGGGTCTTGCCTTCACATAATGAAGTCAGTCTATCCAGATGGTTTTGAAGAAGCTGTCATTGCAACTGTACTTCGTGAAGTCCTGAAAGGTTTGGAGTACCTTCATCATCATGGGCATATACATCGTGATGTGAAGGTAAATGAACATTTTGCACCACAGCTGGTTTCTTATGTATGGCTGTTGAGCCATGCATGGATATCTCACACAGATATTCTCGAATTAGTTGTTTATGGAGATGTTATATTGCTGCATTCTTTGTTTCGATCATAGGCAGGGAATATACTTGTTGATTCACGGGGTGTAGTCAAGCTTGGAGATTTTGGGGTTTCTGCTTGCCTTTTTGATTCTGGTGACAGGCAACGGGCTAGGAATACTTTCGTGGGAACTCCTTGCTGGTACTCATCTGAAAAAAAGTAGCAAATATGCTTTCATTTATGCACCATTAACGTGTCTTCACACATCTAATCTGTGGACTACTGTAATTTATTAGGATGGCACCAGAGGTTATGGAGCAGCTACATGGATACGATTTCAAGTAGGCTACTACTTATTTTAACTGTCTGGATACTTTCTTCACCATGGCATGTTTACAAGCTTGATCTTACAAATATATTACAGGGCAGACATATGGTCCTTCGGAATTACTGCACTTGAACTTGCCCATGGTCATGCTCCTTTCTCGAAGTTCCCTCCCATGAAGGTATAATCAAACGCATGACATTGAGATAAATTCGAGACAATCCCTTATGATGGGTTTGGTGGACTTTTCTGAAGTTATATAGTTCATACACTTTGTCAGGTCTTACTTATGACACTTCAGAATGCCCCTCCGGGCCTTGACTATGAGAGAGATAAGAAATTTTCAAGGGTAAATATGTTTAATATTTGAACAGACCTACCATTGTAGTTTTTATGATGAGCATGACTTCTTATTTGTCAACAACGATTATCTCCTATATCAGCATTTCAAGCAAATGGTTGCTATGTGTCTGGTAAAAGACCCTTCAAAAAGGCCTACAGCGAAAAAATTGCTGAAGCAACCCTTTTTCAAGCAAGCTCGCTCCAGTGATTTCATTAGTCGAAAGCTTTTGGAGGGATTGCCTGGCCTTGGTGCCAGATATTTAGCTCTGAAGGTACACTGGTTTAGGGCTCTATAACTAGTTTTTTGGGGGCAAATGATCGTCTTCACTAAGTTAACAGTGGAGCTTACTATTAATTATAGGAAAAGGATGAAGTTTTACTTTCTCAAAAGAAAATGCCTGATGGACAGAAGGAAGAAATCTCACAGGTGCCAATTCTACATTTCTGTTAGATCATCTAGAAAAAAAAATCTGATTTATACCTTTCCTAACTATGGTTCTATTATTATAGTAAATTGATAAAATATTTTCTCTTGCACTGAGCCTGTTCAGTACGCCTTTGTATAATTGTATATATGTGATGGTGTCATTAAATAATCAAGCATTTCTAAGCAGGTGTGCAGGTCAAATGATACACTTGTTTCTCATTAGTTTCTTTATTCGAGGATCAATGAAGTTATTGTTGTGTACTATTATATTTTTGCCAAAAAAAAAAGTAAATCAAAGGATTCCCAAAACATATTGTGCAAAACATAATAATGGTGATCATAACCTCGGGTGAGTAGTCCATATTAGAAAATTTCCTTCGATTTGTACGGAAATTGCAATATCTGTTTTGCAGCATTAAAAACTTACACATTCTTAGTGTAATAACTATAACATATTATTAGGCATTTATTACCTGAATTTAGGATTCTAGGTCATTTCTTTTTTCCTGTCTTGGTATTTATATGTTTATTTCATTGTCGACATTGTATTACAAGCAAATAATTGCTCCTCTTGTTTCTTATATTGATAGGATGAATACAAAAGAGGCATCAGTAGCTGGAACTTTGATATGGATGACCTGAAGTCTCAAGCTTCACTTGTAAGAACTAGTTCTGTTCTCTTCTTTAGTCATTGATTCACATCATGTAATTTCTCTATCTGTCTGTTCGCAGATTACAGAGTGTGATGACAGTATATCGTGCAAAGATTCAGATGCATCATGTTTCTATGACTTGGACACCATTTTACCAGAGCGAGCAACAGGACCTCATATGTCAAGAGTTTTTTCAATTAAGTATGATACGGACACCGTAAGTATAATTTTTTGTATAAAGTTTTGTGTTCTAACCTAGTATAAAGTTTTGCTTCCATCTAATACCGAGCAAAGTTGGTAGGAAAATGATGTGATGAGCAATGATAAGTCAGCAGTTTCATCTCCTGAGCACCCCATTTGTTTAGCAAGGTATTTAATTTATTCAGATTTTTATAGTTGCTTGCAAATAAGAGGGTCTTATTTCTGTTCGAGCACTAGAGTAGTGGCAGTGCCAGATTATATAGGCTATTTCTGCAGTGTACTTGTACTATTCTCTTCTGAAAACTGTCATTTACTAATTTAAATTGCCAGGAATACATCAATGCTCAGGACTACAAACGGGGTACATGCAAATGGCCAGGTCAGGAAACACAGCTCCACAGAAAGTAGTGAACTGGACTTGCAAGAGAAAGATTCAGATGCTATTCCAACCAGTTCATTCAGCTCATTTCATGAAAGGAAGTTTTCTTTCAGTTCTTGCTCATCTGATGGATTTCTTTCATCCAAAGAGAGGTTTGTTCAACTTTAAAGACTGACGAGTGCATGCTAATTTGAAGAATCACATTTTCCCAAGTAGCAGCACAACCTAAAAATTAGAAACATTGAACTGACTTGTTTGAGAATGATTCAAATCTTGTTTTAGGACCTGTTTTAGTTTATCCATGAATATGACGAATCCCTTTTTACTTGAGAAGCTATTGTTATATGGTGCTGGTAACATGACGCTATTGTGCTATTTTTAAACAGTCTGTAACAGCATGCCTCTTATTCGTTCAGCTCGAAGCATCAAATTAACATTCATAACCGTGACAAGTGCAACGGAGGACCCTTGCAAGTTGCAGATGAACCATCCCCTGAAGCTGTTCCAAAGGTGCCTAAATCATCAGGTAGTGAAATGCATTTAACCCTGAAATCTGTTTATTTTTTCTTCACCGTAGTGACAATTCAGTCACGTTTGAGCATCAGCTAACTCAGTGGTAACTCATCAGAACAAGTTCCTTACGGCTACATAAAACCTTGTATTTGCCTATCGGTTTAACGTGCTTCGTTTTAATACAGCAGCAAATGTTGAGGACCACGACGATAGATCGAAACCTCCTCTTATACAGCAAAGAGGCCGTTTTAAAGTTACGCCTGGGCATGTTGAGTTGGATAAGGTAATTTCCAGCCATAAATACTTACTGCATGTTCTGTTAACTCTGGGATGACATGATTTTTCGTTTCAGGCTCACTCACCTGGACTACAGAAGAGTCACAGCATGCAGGTTATTAGCTTTATCTCTAGGATTTTCAATATCGTTCGATTCAAGAATTGATGCCATCTGTTGGGAGCAATATACAGGTCATTTTTTATTGTGGGTTTTTCCCCCACTAACATACGTGCCACTTTGTTTTCACGTAGGCAATTTCGCACCTTCCTTCGTTAAGTATACCATCCTCAATTGAGGCTGCATCAACCATTATTGGTGGGTCCCTTTATATGCAGCTGTACAATGTTCTACAGACAAATATGCTTCAGAGGGTAAATCTCTCAACCCACACAAACTCACAAGTCACAAAAAAAAAGCTAGAATACGTTCAGCTCTGTTGATGGTAGTCTTGGCCTCACTTGCAGGAGCAAATACTTCATGCGATGAAACAGTTAAGTGGTTGCGATATGGCAATGACGTCACCTGCCTGCATTGCTCCTGCAAGTCGCGCATCATCTCCATCATCAGCATTATCAATTGACAGATCATTGGTGAGTTAACCACACTAGGATGAATCTCAAAGTTAACTCTGCGAGATTATAGAGAACCAAATACTAGTAATTTCTATATAATAATTCCTAATATGTAGTGCCATCATATCAGAGTGGGGAAAATAATTTAAGACATTGCAGGACTGCTATTTATAATTGTCAGTTGTTATAGTAATTGGTTATAAGAGCAAAGACATTACTACCTTTTCAGTTGGAAGCGGCACACGAAAAGGAGAAGGAGCTGGTCAATGAGATCACTGAGCTGCAATGGCGGTAATGATCTTTTACCCCATCCTTTTAGACCGAATTGATAAAGAAATTAAATAGCTTCAGTCCTGAAATTTTGGAGCACTGCAGGTTAGTGTGTTCGCAGGACGAGATACAGAGGCTCAAAGCAAAGGCAGCCCAGGTGACCATGTTTGCCCTCATTAACATTTTTCATATGGTTTGGCGACATTCTAAAAAGTGTATATTGGTGCAGTAGAAATTGGACACGATGCTCAGAAATCCCTAATTTGTTCTGATGCAAATTTCTGCATACTTAATGCAAACATACTTCTTTTTGGTCAGATCTGATCTTGTGGAGATGCTGTTAGATATGGAACAGCACGGGAAGGATTGAGAAGGTATGTGTTAACAATAAGGTTTTTGGAGGAGTTGAAATGGAGACTTTTGGCATATCAGACAAGAAAAACAATGGAGAGATAATATTGTAGGGACTGCAGTCAGTCATTATCCTAGTCTAAAAAGGATGTATTGTTTTATGCAAGTTATATCTTGCTGTTTATGATCATCAGAGCGCCGGTTTTTATCGAGGTGCCGTTATGCAAGGGAAAACAAATTGGAATGTTCGCTATCATTAGCAAAATCCTTGCACTTATGTATTTTTCTTTTGGTTTCATGATGCTTAGAGCAGTAGAACAATACCCAGTGTGGAGTAATCTGCGCGGACTTCTGTCAGTATGGCAGTATGCTGGTTCATTTCATTGTAACCACTCAGGGCAAAGTCTGTCAGTCGTGTAGCAAAGCAGTTACATATACTTGTAGTGTAATTATATTGCCATATTGGCAGTTACTATCTATAATTTACATCCACAAGAAGGATGAATCATCCCTCACCATTGGTGGGCACATCTATGATACACTTGTCCAATTGGAGTTAGAATCTCAGCCCAAACCACAGACCAGCCCTACCAGCACACTATCTTACAAATTGTATGTACACACAGCTGAAGCTTCTGTCATTGGTGAGCCAACTAGTCTGCTAGTCAGTCCTTGTGTTGTTCCTCCCGCTGGGGAGTGCTACAACCGGTATCCAGTAGATTGAGCTCGCGTTGCAAAACCCAGGAAGATTCATTTGACTTTGTGGTGTTGATCGAGTACTCGCGGAAGTATCCATCATGAGTTATGATATAGACAACAGTCCT
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CDS seq | ATGGCCAAGGCGTGGGAGAAGGTGGCGACGGCGGCGGGGTTGGGTGGGTCGGGGGAGAGGCGCAAGTACCCGATCCGCGTGGAGGACTACGAGCTGTACGAGGAGATCGGGCAGGGGGTCAGCGCCATCGTGTACCGATCGCTCTGCAAGCCCCTCGACGAGATCGTCGCCGTCAAGGTGCTCGACTTCGAGCGCACAAACAGTGACCTGAACAACATCATGCGTGAAGCTCAGACGATGATTCTCATAGATCAGCCTAACGTCATGAAGGCACATTGTTCATTTACAAATAACCACTCGTTGTGGGTGGTCATGCCATACATGGCTGGAGGGTCTTGCCTTCACATAATGAAGTCAGTCTATCCAGATGGTTTTGAAGAAGCTGTCATTGCAACTGTACTTCGTGAAGTCCTGAAAGGTTTGGAGTACCTTCATCATCATGGGCATATACATCGTGATGTGAAGGCAGGGAATATACTTGTTGATTCACGGGGTGTAGTCAAGCTTGGAGATTTTGGGGTTTCTGCTTGCCTTTTTGATTCTGGTGACAGGCAACGGGCTAGGAATACTTTCGTGGGAACTCCTTGCTGGATGGCACCAGAGGTTATGGAGCAGCTACATGGATACGATTTCAAGGCAGACATATGGTCCTTCGGAATTACTGCACTTGAACTTGCCCATGGTCATGCTCCTTTCTCGAAGTTCCCTCCCATGAAGGTCTTACTTATGACACTTCAGAATGCCCCTCCGGGCCTTGACTATGAGAGAGATAAGAAATTTTCAAGGCATTTCAAGCAAATGGTTGCTATGTGTCTGGTAAAAGACCCTTCAAAAAGGCCTACAGCGAAAAAATTGCTGAAGCAACCCTTTTTCAAGCAAGCTCGCTCCAGTGATTTCATTAGTCGAAAGCTTTTGGAGGGATTGCCTGGCCTTGGTGCCAGATATTTAGCTCTGAAGGAAAAGGATGAAGTTTTACTTTCTCAAAAGAAAATGCCTGATGGACAGAAGGAAGAAATCTCACAGGATGAATACAAAAGAGGCATCAGTAGCTGGAACTTTGATATGGATGACCTGAAGTCTCAAGCTTCACTTATTACAGAGTGTGATGACAGTATATCGTGCAAAGATTCAGATGCATCATGTTTCTATGACTTGGACACCATTTTACCAGAGCGAGCAACAGGACCTCATATGTCAAGAGTTTTTTCAATTAAGTATGATACGGACACCGAATACATCAATGCTCAGGACTACAAACGGGGTACATGCAAATGGCCAGGTCAGGAAACACAGCTCCACAGAAACTCGAAGCATCAAATTAACATTCATAACCGTGACAAGTGCAACGGAGGACCCTTGCAAGTTGCAGATGAACCATCCCCTGAAGCTGTTCCAAAGGTGCCTAAATCATCAGCAGCAAATGTTGAGGACCACGACGATAGATCGAAACCTCCTCTTATACAGCAAAGAGGCCGTTTTAAAGTTACGCCTGGGCATGTTGAGTTGGATAAGGCTCACTCACCTGGACTACAGAAGAGTCACAGCATGCAGGCAATTTCGCACCTTCCTTCGTTAAGTATACCATCCTCAATTGAGGCTGCATCAACCATTATTGGTGGGTCCCTTTATATGCAGCTGTACAATGTTCTACAGACAAATATGCTTCAGAGGGAGCAAATACTTCATGCGATGAAACAGTTAAGTGGTTGCGATATGGCAATGACGTCACCTGCCTGCATTGCTCCTGCAAGTCGCGCATCATCTCCATCATCAGCATTATCAATTGACAGATCATTGTTGGAAGCGGCACACGAAAAGGAGAAGGAGCTGGTCAATGAGATCACTGAGCTGCAATGGCGGTTAGTGTGTTCGCAGGACGAGATACAGAGGCTCAAAGCAAAGGCAGCCCAGATCTGA
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Protein seq | MAKAWEKVATAAGLGGSGERRKYPIRVEDYELYEEIGQGVSAIVYRSLCKPLDEIVAVKVLDFERTNSDLNNIMREAQTMILIDQPNVMKAHCSFTNNHSLWVVMPYMAGGSCLHIMKSVYPDGFEEAVIATVLREVLKGLEYLHHHGHIHRDVKAGNILVDSRGVVKLGDFGVSACLFDSGDRQRARNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKFPPMKVLLMTLQNAPPGLDYERDKKFSRHFKQMVAMCLVKDPSKRPTAKKLLKQPFFKQARSSDFISRKLLEGLPGLGARYLALKEKDEVLLSQKKMPDGQKEEISQDEYKRGISSWNFDMDDLKSQASLITECDDSISCKDSDASCFYDLDTILPERATGPHMSRVFSIKYDTDTEYINAQDYKRGTCKWPGQETQLHRNSKHQINIHNRDKCNGGPLQVADEPSPEAVPKVPKSSAANVEDHDDRSKPPLIQQRGRFKVTPGHVELDKAHSPGLQKSHSMQAISHLPSLSIPSSIEAASTIIGGSLYMQLYNVLQTNMLQREQILHAMKQLSGCDMAMTSPACIAPASRASSPSSALSIDRSLLEAAHEKEKELVNEITELQWRLVCSQDEIQRLKAKAAQI |
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Function | Serine/threonine-protein kinase fray2 [UniProtKB/Swiss-Prot:Q551H4] |
Transcripts
Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
LOC_Os02g54900 | LOC_Os02g54900.1 | Chr02 | 33623756 | 33630043 | + | MSU_osa1r7 | ||
CDS seq | ATGGCCAAGGCGTGGGAGAAGGTGGCGACGGCGGCGGGGTTGGGTGGGTCGGGGGAGAGGCGCAAGTACCCGATCCGCGTGGAGGACTACGAGCTGTACGAGGAGATCGGGCAGGGGGTCAGCGCCATCGTGTACCGATCGCTCTGCAAGCCCCTCGACGAGATCGTCGCCGTCAAGGTGCTCGACTTCGAGCGCACAAACAGTGACCTGAACAACATCATGCGTGAAGCTCAGACGATGATTCTCATAGATCAGCCTAACGTCATGAAGGCACATTGTTCATTTACAAATAACCACTCGTTGTGGGTGGTCATGCCATACATGGCTGGAGGGTCTTGCCTTCACATAATGAAGTCAGTCTATCCAGATGGTTTTGAAGAAGCTGTCATTGCAACTGTACTTCGTGAAGTCCTGAAAGGTTTGGAGTACCTTCATCATCATGGGCATATACATCGTGATGTGAAGGCAGGGAATATACTTGTTGATTCACGGGGTGTAGTCAAGCTTGGAGATTTTGGGGTTTCTGCTTGCCTTTTTGATTCTGGTGACAGGCAACGGGCTAGGAATACTTTCGTGGGAACTCCTTGCTGGATGGCACCAGAGGTTATGGAGCAGCTACATGGATACGATTTCAAGGCAGACATATGGTCCTTCGGAATTACTGCACTTGAACTTGCCCATGGTCATGCTCCTTTCTCGAAGTTCCCTCCCATGAAGGTCTTACTTATGACACTTCAGAATGCCCCTCCGGGCCTTGACTATGAGAGAGATAAGAAATTTTCAAGGCATTTCAAGCAAATGGTTGCTATGTGTCTGGTAAAAGACCCTTCAAAAAGGCCTACAGCGAAAAAATTGCTGAAGCAACCCTTTTTCAAGCAAGCTCGCTCCAGTGATTTCATTAGTCGAAAGCTTTTGGAGGGATTGCCTGGCCTTGGTGCCAGATATTTAGCTCTGAAGGAAAAGGATGAAGTTTTACTTTCTCAAAAGAAAATGCCTGATGGACAGAAGGAAGAAATCTCACAGGATGAATACAAAAGAGGCATCAGTAGCTGGAACTTTGATATGGATGACCTGAAGTCTCAAGCTTCACTTATTACAGAGTGTGATGACAGTATATCGTGCAAAGATTCAGATGCATCATGTTTCTATGACTTGGACACCATTTTACCAGAGCGAGCAACAGGACCTCATATGTCAAGAGTTTTTTCAATTAAGTATGATACGGACACCGAATACATCAATGCTCAGGACTACAAACGGGGTACATGCAAATGGCCAGGTCAGGAAACACAGCTCCACAGAAACTCGAAGCATCAAATTAACATTCATAACCGTGACAAGTGCAACGGAGGACCCTTGCAAGTTGCAGATGAACCATCCCCTGAAGCTGTTCCAAAGGTGCCTAAATCATCAGCAGCAAATGTTGAGGACCACGACGATAGATCGAAACCTCCTCTTATACAGCAAAGAGGCCGTTTTAAAGTTACGCCTGGGCATGTTGAGTTGGATAAGGCTCACTCACCTGGACTACAGAAGAGTCACAGCATGCAGGCAATTTCGCACCTTCCTTCGTTAAGTATACCATCCTCAATTGAGGCTGCATCAACCATTATTGGTGGGTCCCTTTATATGCAGCTGTACAATGTTCTACAGACAAATATGCTTCAGAGGGAGCAAATACTTCATGCGATGAAACAGTTAAGTGGTTGCGATATGGCAATGACGTCACCTGCCTGCATTGCTCCTGCAAGTCGCGCATCATCTCCATCATCAGCATTATCAATTGACAGATCATTGTTGGAAGCGGCACACGAAAAGGAGAAGGAGCTGGTCAATGAGATCACTGAGCTGCAATGGCGGTTAGTGTGTTCGCAGGACGAGATACAGAGGCTCAAAGCAAAGGCAGCCCAGATCTGA
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Protein seq | MAKAWEKVATAAGLGGSGERRKYPIRVEDYELYEEIGQGVSAIVYRSLCKPLDEIVAVKVLDFERTNSDLNNIMREAQTMILIDQPNVMKAHCSFTNNHSLWVVMPYMAGGSCLHIMKSVYPDGFEEAVIATVLREVLKGLEYLHHHGHIHRDVKAGNILVDSRGVVKLGDFGVSACLFDSGDRQRARNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKFPPMKVLLMTLQNAPPGLDYERDKKFSRHFKQMVAMCLVKDPSKRPTAKKLLKQPFFKQARSSDFISRKLLEGLPGLGARYLALKEKDEVLLSQKKMPDGQKEEISQDEYKRGISSWNFDMDDLKSQASLITECDDSISCKDSDASCFYDLDTILPERATGPHMSRVFSIKYDTDTEYINAQDYKRGTCKWPGQETQLHRNSKHQINIHNRDKCNGGPLQVADEPSPEAVPKVPKSSAANVEDHDDRSKPPLIQQRGRFKVTPGHVELDKAHSPGLQKSHSMQAISHLPSLSIPSSIEAASTIIGGSLYMQLYNVLQTNMLQREQILHAMKQLSGCDMAMTSPACIAPASRASSPSSALSIDRSLLEAAHEKEKELVNEITELQWRLVCSQDEIQRLKAKAAQI
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Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
Leaf | Root | Panicle | |
FPKM | 0.190742 | 0.070046 | 0.383424 |
Homologues
Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
---|---|---|---|---|---|
Leaf | Root | Panicle | |||
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0791700 | RBH | 0.296143 | 0.153731 | 1.904864 |
Nipponbare | IRGSP 1.0 | MSU | LOC_Os06g08280 | RBH | 1.415101 | 1.135373 | 0.927056 |
Nipponbare | IRGSP 1.0 | RAP-db | Os02g0791700 | RBH | None | None | None |
Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0036610 | RBH | 0.000000 | 0.254515 | 0.436310 |
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0036720 | RBH | 0.050458 | 0.000000 | 2.102068 |
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0036550 | RBH | 0.000000 | 0.000000 | 4.805834 |
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0036180 | RBH | 0.028812 | 0.000000 | None |
PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0036360 | RBH | 4.040481 | 2.413063 | 8.750922 |
Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0551000 | RBH | 3.860537 | 2.3536385 | 2.3708785 |
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0036150 | RBH | 0.000000 | 0.000000 | 2.117196 |
Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0581400 | RBH | 1.743068 | 1.049514 | 0.468282 |
LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0036400 | RBH | 0.420262 | 0.046194 | None |
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0036230 | RBH | 0.993601 | 1.287442 | None |
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0036460 | RBH | 3.570672 | 0.000000 | None |
LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0036430 | RBH | 0.567038 | 0.163965 | 1.393417 |
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0036050 | RBH | 0.035833 | 0.000000 | None |
N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G036670 | RBH | 0.122646 | 0.349342 | 0.733784 |
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0036440 | RBH | 0.195898 | 4.629376 | 4.346688 |