Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os02g52670 | OGI:02091020 | 16/16 | Nipponbare | IRGSP 1.0 | MSU | Chr02:32204392-32205335 | ||||||||
| Gene Symbol | ERF103, DERF5, OsDERF5, OsERF#103, OsERF103, AP2/EREBP#130, AP2/EREBP130, OsERF109 | ||||||||||
| DNA seq | TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCGGGGAACAGTAGTAAAGGTTTAAGAATCCTATTAAGAATGGAACAAGAAATGAAGCAACGATCGAGCAATGAAATGGGTGACAGATCATCGATCATGGCATGGACCAGAAGCTGCCGTCGTCGAGCATCATGATCTCCCGTAGGCCGTCCCAGATCTCCTGGTCCTTCGCCGCCGCCGCCGTCCTCGCGTGCTCTGGCGCGTGCACCGGCGACGACGCGTTCGAGCCGCAGTTCTCACGGAGGTTGTGATGGAGGAGTGGACGTGGCTGCTGCGCGGCCGTGGACGCCGGGAAGTTGAGCTTGGCGCGCTGGCCGCGGAACTCGAGCGCGGCGACGTCGTAGGCGCGCGCGGCGTCCTCGGCGGTGTCGAACGTGCCGAGCCACTTGCAGACGGCGCGGCGCGGGTCGCGGATCTCCGCCGCCCACTTCCCCCACGGCCGACGCCGCACGCCCCTGTACCTGCTCCCCTCGCCGCCGCTCCGCCTCCGCGGCCTCCTCTTGCCCACGCCGCCCGTCACGCCGCCGCTGGCCACCGCGCCCGTGGTGCACTCCCCCTCATCCTCCTCGTCGCTGCAGCTCGAGCCAGCCGCCGCCGCCAACACCACCACCTCGCAGTCCACGCCGATGCACCCGTCCACCCCGCACCTGGCGCACGTAGCCGCACCGGCAACCACGGTCGCCATCGTCGGCTCCGGCAGCAGCGTCGGCACCGTGGTGTCACCGGACACGACGGAGATGAGCGCGCGGATGAACAGCGAGTCCTCCCGCTCGCTGTTGGGGAGATGGAACCCGCCGCCGCCGCGCTCCACCCTCGGCACCATGGCTGAACCAAACAAACCTCGGCGAGTTCGGTCGGTGTCACGCAAAAGTTGGCGCGCTATCGTGATCCGGGCGCTGCTGCTGATGGCT
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| CDS seq | ATGGTGCCGAGGGTGGAGCGCGGCGGCGGCGGGTTCCATCTCCCCAACAGCGAGCGGGAGGACTCGCTGTTCATCCGCGCGCTCATCTCCGTCGTGTCCGGTGACACCACGGTGCCGACGCTGCTGCCGGAGCCGACGATGGCGACCGTGGTTGCCGGTGCGGCTACGTGCGCCAGGTGCGGGGTGGACGGGTGCATCGGCGTGGACTGCGAGGTGGTGGTGTTGGCGGCGGCGGCTGGCTCGAGCTGCAGCGACGAGGAGGATGAGGGGGAGTGCACCACGGGCGCGGTGGCCAGCGGCGGCGTGACGGGCGGCGTGGGCAAGAGGAGGCCGCGGAGGCGGAGCGGCGGCGAGGGGAGCAGGTACAGGGGCGTGCGGCGTCGGCCGTGGGGGAAGTGGGCGGCGGAGATCCGCGACCCGCGCCGCGCCGTCTGCAAGTGGCTCGGCACGTTCGACACCGCCGAGGACGCCGCGCGCGCCTACGACGTCGCCGCGCTCGAGTTCCGCGGCCAGCGCGCCAAGCTCAACTTCCCGGCGTCCACGGCCGCGCAGCAGCCACGTCCACTCCTCCATCACAACCTCCGTGAGAACTGCGGCTCGAACGCGTCGTCGCCGGTGCACGCGCCAGAGCACGCGAGGACGGCGGCGGCGGCGAAGGACCAGGAGATCTGGGACGGCCTACGGGAGATCATGATGCTCGACGACGGCAGCTTCTGGTCCATGCCATGA
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| Protein seq | MVPRVERGGGGFHLPNSEREDSLFIRALISVVSGDTTVPTLLPEPTMATVVAGAATCARCGVDGCIGVDCEVVVLAAAAGSSCSDEEDEGECTTGAVASGGVTGGVGKRRPRRRSGGEGSRYRGVRRRPWGKWAAEIRDPRRAVCKWLGTFDTAEDAARAYDVAALEFRGQRAKLNFPASTAAQQPRPLLHHNLRENCGSNASSPVHAPEHARTAAAAKDQEIWDGLREIMMLDDGSFWSMP |
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| Function | Ethylene-responsive transcription factor ERF112 [UniProtKB/Swiss-Prot:P93007] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os02g52670 | LOC_Os02g52670.1 | Chr02 | 32204392 | 32205335 | - | MSU_osa1r7 | ||
| CDS seq | ATGGTGCCGAGGGTGGAGCGCGGCGGCGGCGGGTTCCATCTCCCCAACAGCGAGCGGGAGGACTCGCTGTTCATCCGCGCGCTCATCTCCGTCGTGTCCGGTGACACCACGGTGCCGACGCTGCTGCCGGAGCCGACGATGGCGACCGTGGTTGCCGGTGCGGCTACGTGCGCCAGGTGCGGGGTGGACGGGTGCATCGGCGTGGACTGCGAGGTGGTGGTGTTGGCGGCGGCGGCTGGCTCGAGCTGCAGCGACGAGGAGGATGAGGGGGAGTGCACCACGGGCGCGGTGGCCAGCGGCGGCGTGACGGGCGGCGTGGGCAAGAGGAGGCCGCGGAGGCGGAGCGGCGGCGAGGGGAGCAGGTACAGGGGCGTGCGGCGTCGGCCGTGGGGGAAGTGGGCGGCGGAGATCCGCGACCCGCGCCGCGCCGTCTGCAAGTGGCTCGGCACGTTCGACACCGCCGAGGACGCCGCGCGCGCCTACGACGTCGCCGCGCTCGAGTTCCGCGGCCAGCGCGCCAAGCTCAACTTCCCGGCGTCCACGGCCGCGCAGCAGCCACGTCCACTCCTCCATCACAACCTCCGTGAGAACTGCGGCTCGAACGCGTCGTCGCCGGTGCACGCGCCAGAGCACGCGAGGACGGCGGCGGCGGCGAAGGACCAGGAGATCTGGGACGGCCTACGGGAGATCATGATGCTCGACGACGGCAGCTTCTGGTCCATGCCATGA
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| Protein seq | MVPRVERGGGGFHLPNSEREDSLFIRALISVVSGDTTVPTLLPEPTMATVVAGAATCARCGVDGCIGVDCEVVVLAAAAGSSCSDEEDEGECTTGAVASGGVTGGVGKRRPRRRSGGEGSRYRGVRRRPWGKWAAEIRDPRRAVCKWLGTFDTAEDAARAYDVAALEFRGQRAKLNFPASTAAQQPRPLLHHNLRENCGSNASSPVHAPEHARTAAAAKDQEIWDGLREIMMLDDGSFWSMP
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.004170 | 0.249271 | 0.003771 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0764700 | RBH | 0.0 | 0.296678 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os06g11860 | SBH | 1.034350 | 1.420106 | 0.494407 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0764700 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0034760 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0034860 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0034730 | RBH | 0.0 | 0.0 | 0.364993 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0034310 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0034370 | RBH | 0.0 | 0.0 | 1.191578 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0526700 | RBH | 0.6003145 | 45.445177 | 16.4217795 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0034210 | RBH | 0.0 | 0.0 | 0.142190 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0556600 | RBH | 0.8895775 | 10.1057525 | 0.154983 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0034460 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0034290 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0034550 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0034490 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0034080 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G034750 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0034470 | RBH | 0.0 | 0.0 | 0.110522 |
