Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os02g51799 | OGI:02089780 | 16/16 | Nipponbare | IRGSP 1.0 | MSU | Chr02:31724820-31726321 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | CTAAAAAGAGGAAGAAGGAGATACATAGTCTCTCATCAACTCGTCGAATAAGGCGTCAGGCAAGAGAGGGAATTCAGTGATGTTGCCATCGCAGCTTGGGGTGCTGTAGACATCACCGAGGTTGGAGATGGTGGGGTAGTCGGCGAGCGGCGGAAGAGAGCCTTCCGGCAGCAGCGTCGTCGTCGTCGTCTTCGTGGCGCCATTGATGATCTCCCTCTCGCCAGTGCTTGCAGCGTAATCTTGGTTGTGGTTGGCGTCGTTGATGATGGCGGCCGACTGGTCGAACAACGAGCTGCCATGCATTTGGATGTTAGGCAATTGTCCAGCGAGGAATGAGCCTTGGCCACCATTGCCAAAGAAGCTCGAAGGAGGCAACGGGGACAAGGCCGTGGACGACATCGGCGAAGGCAGCGGCGACAAGGACGACGTCGACATCGGCGACAAGGCCGCGGACGACATCGCCGGCGGGCTAAGCAGTCCCGCGCCCATCTGCTCCATGTCGCCGCCCGGCATGGCGGCGGCGGCGCCGCCGATGCAGCCTGATCTGGGGCTAGTCGCGGCGGACGGCGGCGGAGGCTGGAGCAGCGCCTGCAGGTGCAGGTACTGTCCGAACTTCGCTGCCTGGGCCGCCTCGGCTTGCTGCAGCCCGGCGGCCGCGGCGGCGGGGTCGTCCCACGGCAGCTGGCCCACGAGCTGGCGGAGGTTGGCGAGCGCGATCAGCTGCGGCAGCGCGGCGAAGAAGTCGGTCCTCGGCCGGTGCGTCGTCGGGTCGATGCCCTTCTGGATCAGATCCTTCTTCAGGTGTGTGTTCCAGTAGTTCTTGATCTCGTTGTCAGTCCTACCTGGGAGGTGCTTGGCAATGGCTGACCACCTGCAGGTTTGATCATGACAGCAACAGCTTACTTAGAAATTAGAATATCAAACAGCTAGCAGGATTGAGCTAGCTATCTAGCTAGCAGCAGTCAGTATCAGCTAGCGTATCACTGAACTGCATGCCAATTGCCAAGCATGGTCGATTCCTGAGGATTAGATGCAAATATGAACCAGTTGATGGATGCAAGAAAAGCATATTTATGCTATGGATTTGATGAGGAGGTGCAGTGCACTGCAGTACGTACTTGTTGCCAAGAACGGCGTGAAGCTGGAGGATGGTATCCTTCTCGGCAGAGGTGAACTTTCCTCTCTTGATGTCTGGCCTCAGGTAGTTCGTCCATCTTAGCCTGCAGCTCTTGCCACACCTGTTCAGCCCTGCAACATGTAAAAAAAAGGAAAACTCAACGCCATGGCCATCGAGCTATAGCTGCATTTGGATCGATGCTAGCTACAAGATCAAAGCTACGTACGCCATCCGTTGTGCATGTACACATACCTGCAAGCTTAGGCAGCGCTCTCCAGCTGCCATGGCCGTTCTTCTGGATGTACTCCATGAGCTTCTCATCTTCCTCCGTGGTCCAGGGGCCCTTCTTGAGGCCGTTCTCGTCGCAGCAAGGAGACCTCCCCAT
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| CDS seq | ATGGGGAGGTCTCCTTGCTGCGACGAGAACGGCCTCAAGAAGGGCCCCTGGACCACGGAGGAAGATGAGAAGCTCATGGAGTACATCCAGAAGAACGGCCATGGCAGCTGGAGAGCGCTGCCTAAGCTTGCAGGGCTGAACAGGTGTGGCAAGAGCTGCAGGCTAAGATGGACGAACTACCTGAGGCCAGACATCAAGAGAGGAAAGTTCACCTCTGCCGAGAAGGATACCATCCTCCAGCTTCACGCCGTTCTTGGCAACAAGTGGTCAGCCATTGCCAAGCACCTCCCAGGTAGGACTGACAACGAGATCAAGAACTACTGGAACACACACCTGAAGAAGGATCTGATCCAGAAGGGCATCGACCCGACGACGCACCGGCCGAGGACCGACTTCTTCGCCGCGCTGCCGCAGCTGATCGCGCTCGCCAACCTCCGCCAGCTCGTGGGCCAGCTGCCGTGGGACGACCCCGCCGCCGCGGCCGCCGGGCTGCAGCAAGCCGAGGCGGCCCAGGCAGCGAAGTTCGGACAGTACCTGCACCTGCAGGCGCTGCTCCAGCCTCCGCCGCCGTCCGCCGCGACTAGCCCCAGATCAGGCTGCATCGGCGGCGCCGCCGCCGCCATGCCGGGCGGCGACATGGAGCAGATGGGCGCGGGACTGCTTAGCCCGCCGGCGATGTCGTCCGCGGCCTTGTCGCCGATGTCGACGTCGTCCTTGTCGCCGCTGCCTTCGCCGATGTCGTCCACGGCCTTGTCCCCGTTGCCTCCTTCGAGCTTCTTTGGCAATGGTGGCCAAGGCTCATTCCTCGCTGGACAATTGCCTAACATCCAAATGCATGGCAGCTCGTTGTTCGACCAGTCGGCCGCCATCATCAACGACGCCAACCACAACCAAGATTACGCTGCAAGCACTGGCGAGAGGGAGATCATCAATGGCGCCACGAAGACGACGACGACGACGCTGCTGCCGGAAGGCTCTCTTCCGCCGCTCGCCGACTACCCCACCATCTCCAACCTCGGTGATGTCTACAGCACCCCAAGCTGCGATGGCAACATCACTGAATTCCCTCTCTTGCCTGACGCCTTATTCGACGAGTTGATGAGAGACTATGTATCTCCTTCTTCCTCTTTTTAG
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| Protein seq | MGRSPCCDENGLKKGPWTTEEDEKLMEYIQKNGHGSWRALPKLAGLNRCGKSCRLRWTNYLRPDIKRGKFTSAEKDTILQLHAVLGNKWSAIAKHLPGRTDNEIKNYWNTHLKKDLIQKGIDPTTHRPRTDFFAALPQLIALANLRQLVGQLPWDDPAAAAAGLQQAEAAQAAKFGQYLHLQALLQPPPPSAATSPRSGCIGGAAAAMPGGDMEQMGAGLLSPPAMSSAALSPMSTSSLSPLPSPMSSTALSPLPPSSFFGNGGQGSFLAGQLPNIQMHGSSLFDQSAAIINDANHNQDYAASTGEREIINGATKTTTTTLLPEGSLPPLADYPTISNLGDVYSTPSCDGNITEFPLLPDALFDELMRDYVSPSSSF |
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| Function | Transcription factor MYB93 [UniProtKB/Swiss-Prot:Q9S9Z2] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os02g51799 | LOC_Os02g51799.1 | Chr02 | 31724820 | 31726321 | - | MSU_osa1r7 | ||
| CDS seq | ATGGGGAGGTCTCCTTGCTGCGACGAGAACGGCCTCAAGAAGGGCCCCTGGACCACGGAGGAAGATGAGAAGCTCATGGAGTACATCCAGAAGAACGGCCATGGCAGCTGGAGAGCGCTGCCTAAGCTTGCAGGGCTGAACAGGTGTGGCAAGAGCTGCAGGCTAAGATGGACGAACTACCTGAGGCCAGACATCAAGAGAGGAAAGTTCACCTCTGCCGAGAAGGATACCATCCTCCAGCTTCACGCCGTTCTTGGCAACAAGTGGTCAGCCATTGCCAAGCACCTCCCAGGTAGGACTGACAACGAGATCAAGAACTACTGGAACACACACCTGAAGAAGGATCTGATCCAGAAGGGCATCGACCCGACGACGCACCGGCCGAGGACCGACTTCTTCGCCGCGCTGCCGCAGCTGATCGCGCTCGCCAACCTCCGCCAGCTCGTGGGCCAGCTGCCGTGGGACGACCCCGCCGCCGCGGCCGCCGGGCTGCAGCAAGCCGAGGCGGCCCAGGCAGCGAAGTTCGGACAGTACCTGCACCTGCAGGCGCTGCTCCAGCCTCCGCCGCCGTCCGCCGCGACTAGCCCCAGATCAGGCTGCATCGGCGGCGCCGCCGCCGCCATGCCGGGCGGCGACATGGAGCAGATGGGCGCGGGACTGCTTAGCCCGCCGGCGATGTCGTCCGCGGCCTTGTCGCCGATGTCGACGTCGTCCTTGTCGCCGCTGCCTTCGCCGATGTCGTCCACGGCCTTGTCCCCGTTGCCTCCTTCGAGCTTCTTTGGCAATGGTGGCCAAGGCTCATTCCTCGCTGGACAATTGCCTAACATCCAAATGCATGGCAGCTCGTTGTTCGACCAGTCGGCCGCCATCATCAACGACGCCAACCACAACCAAGATTACGCTGCAAGCACTGGCGAGAGGGAGATCATCAATGGCGCCACGAAGACGACGACGACGACGCTGCTGCCGGAAGGCTCTCTTCCGCCGCTCGCCGACTACCCCACCATCTCCAACCTCGGTGATGTCTACAGCACCCCAAGCTGCGATGGCAACATCACTGAATTCCCTCTCTTGCCTGACGCCTTATTCGACGAGTTGATGAGAGACTATGTATCTCCTTCTTCCTCTTTTTAG
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| Protein seq | MGRSPCCDENGLKKGPWTTEEDEKLMEYIQKNGHGSWRALPKLAGLNRCGKSCRLRWTNYLRPDIKRGKFTSAEKDTILQLHAVLGNKWSAIAKHLPGRTDNEIKNYWNTHLKKDLIQKGIDPTTHRPRTDFFAALPQLIALANLRQLVGQLPWDDPAAAAAGLQQAEAAQAAKFGQYLHLQALLQPPPPSAATSPRSGCIGGAAAAMPGGDMEQMGAGLLSPPAMSSAALSPMSTSSLSPLPSPMSSTALSPLPPSSFFGNGGQGSFLAGQLPNIQMHGSSLFDQSAAIINDANHNQDYAASTGEREIINGATKTTTTTLLPEGSLPPLADYPTISNLGDVYSTPSCDGNITEFPLLPDALFDELMRDYVSPSSSF
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0732600 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os06g10330 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0754400 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0034130 | RBH | 0.0 | 1.637017 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0034210 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0034100 | RBH | 0.0 | 0.000000 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0033680 | RBH | 0.0 | 0.000000 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0033750 | RBH | 0.0 | 2.689322 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0518600 | RBH | 0.105261 | 1.0132215 | 0.02051 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0033570 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0549000 | RBH | 0.1203045 | 0.510049 | 0.007447 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0033830 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0033650 | RBH | 0.0 | 2.352829 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0033960 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0033860 | RBH | 0.000000 | 0.185924 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0033460 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G034130 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0033840 | RBH | 0.0 | 0.0 | 0.0 |
