Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os02g38470 | OGI:02066470 | 16/16 | Nipponbare | IRGSP 1.0 | MSU | Chr02:23255086-23262297 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | TCTGGTTCCAAAGTGCCAACATCTTATTCAAGTATTCAACACAAGTTCAATGCCTTGACCTTTGCATTGTTGAAGTCCACAATATTGTCAGCTTGTCGTCTTGGACGGCAAGGCTATATATATACATTACACCAATTGGTCAGGACAAGTATGCAGCACAACAGCCAACCCAAAAAGAACCATCATCTCGTCAGTAGTGGAGGGCGCCTAGAACCGCGGCTTTCACACAACCTGGTGGCCAGCCAGCACATTGTTGTCGTTGCAACCAAAAGAAAAGCCATAGTTCCTGATGCCTGCACAGAGTCATGTGAACATGTGAGCTGCAAGAATTTCCCTGATGGATAAAACGAAAAATATGGCAGCAAGAACATTGCATAAAAGCAAACCAACCTAAGATTATATTTACAGAGGGAGCAGAGCAGCCATGTTCTACTGAAGATGGTGCACCCAGCTAGAGCACTTGCCATCACTTTCTTGTGATATAAACCTGGAACGCAAGCTCATCTTCGTCCATCTCTTTCACAAACTTGCAGACATCCCCAGCCTGGAGGTTGTTTGCTGCAGCAAAAGGTTTCCAGCCCGCGGTGAAGCCTACGAAGACCGGTTTGTCATGGTAGAAGACCGGCCATAGCCTCCTCATGGGATCCTTGAGGATTACGACGTTCCGGTCATACCTTCCTTTTTGCCGACAAGTGATTGGAAGCGATTTGGGCAACTCCTGAACAAAGACAGCAAAGAAAGAGCAGTTGTCAATGGGCTTGCCATACTCATCAACAGTGTCAGGAGCTTTATAGCGTTATTATAGGCAAGTGTAAGTCAAAACTAAAGTTTTATGCTGCATCAATTCCTTATTGTGATCTTAGTAGATTGATGAGTATGCCCAAGAACAAGTAGCTACTGACCTACTGTGATACTAGTAGAGGGGTATCTTTTACAGCGGCCTAAAACGAATTAAGACAAATAGAAAACACACGAATTCAAGCCTCAACAATACAATCATAACCAGCAATGAGCTATTCTGGAGTGATGCTTTTTTATGTGGCCTAGATAATAAACAGATGTTTCCAATCCAAACACACCGCCCTCACTGCAATCAGCATGAACTCAACAAATTGCATCCATTGCACAACACTGTAGCTGAAAACCTTCACGAATTGCATAAGGTGGCGCATTACAATCTAGAGATATATGATTGGGTTTCTGCTGACATGGCCACTAAGATTGCATCTTGGCAATTAACTTATTACTTCCTCTGTCCCATAATATAGCAACCTAGTACCGGATGTGACATTTCATAGTACAATGAATCTGGACAGGAGGAACCTAGTACCAGATGTGACATTTCATAGTACAATGAATCTAGACATCCTCCTGTCCAGATTCATTGTACTATAAAATGTCCCATCCGGTACTAGGTTGCTATATTATGGGACGGAGGGAGTAATTGTTTAGCAGTATTTTATAAAACTATATTTCTATGGTTTTTTGCACTGCTAGATAATATTTTAATAATTCATGTTTGTATTTGAAAGTAGAACTCTACTCCTTATATAACTCTTGCACCTATTTCTGAAAATACAACTGTACAACTTATACGACTCTTTAATATTGACTCAATGTTCTTCATCCCAACCTAAGTCCTCCCTTCATACCTAGCGGCTAGCAGCCAACACCACCCAGCTATCCTCCAGCGGTGTTTGCTCGTCATGGACTCGGACCACGACACCTTACGTTGCAGATGGGTAGATCCATCGCAATCCAAAAGTGCAAGTCCTTATTTTTCACTCTTGGTGTGGCATTTTTTCTATATACTGCTAGTATATACTTGCAGTACAATGTACTCCCTCCATTCCAAAATATAAGGCACAACCACTTTTGTTAAATGTTCTATAATATAAGGCATGCATACATGTAGGCAATTAACTATAGCATCTTCTCCATTAAATTATTACTTTTTTAAATCATCCACTCTCATGTTTTCTAATTCTATTGGATGCATGCATTGTATTTATTAGGATGATCCAAACTACAAGATGATAATAATTATTTCTTGGTCTTTGAGTTATGAGTGGTTATGCCTTATATTTTGGAATGGAGGGAGTACCGTAAAAGTCCTCTTTTTCTATCCCTTGATTCCATGAAAGCAGATATGATGGATTATTCTGCCCTTGTTTTAATAAAATACTAACGAGCTGCAAAAGAAATTGTCCATGGGATACAAACAACTCACAAGCCATTTCTGAATGGTAGAAGGGATGCAGAATTGAAGGGAATGATCATCCAGATCCAGGAGTTCAGCCTTAGCAGGCAGCAGAGCCACTGGGGTTACACAACTGGTAAAATTTCCATTTTCCTGCTGGGGGATCTGAAGTTCTGCATGGGTGAATTTGAGTGCCCAACAAGAAACACAAAATGAAATTGGTCAGCCTCTCCTTAATTTTACAATGAAATAAACTAGGTAAGTTCACCTGATTGATGAGCAAATACACGGTTGACAGACACTGCAATTTTGTCCCCCTTTCTATTTCCGCTGCTACCAGTTGGTTTCAATGGCTCCTTTTTTGTTTGCAGTTGAACAGTAGCTCCTACCAAATAGACAATTCAGTACACGCTGTAAATAAAAATTATATTCAAACTAAACAAGCTAACTTTGTAAATGTTAGTTTCAGGCTTTTGAGAAATAAAAATAGTTTCAGGCTTTCAGACATCATAGGTATTATGAGAAGTAGCACCCTTCCACCTTTTTGATTGAACAAATGGTTGACCTCTGTCCTGCTACGTCCGCATTTGGATATTGATACGCTATCAAGAATCGAGAGTTCTTCAATAGGTATGTTGAGAATTGGTTTGAGGCAGGTATCAGTAACATCAGACTCTATCCGTAGATCAACTGGACTTTCTCCCATTGCACCACAATTACCAACTAACTTCTCTCCAGCTTTTTGTGTTTTTTCAGGTCTAACCTGTCCAATGTCATCAAGAGCTGCTCGACCGTTCACAATACCCCTTTTCCACTTCTCCAAGCACCGAGTACCCGCTGGAGCTTCATATATTCTGAAAATATTTCCACTAATATTCATCTCACTATCATTAGGATATTTATCAACAGCTATGATAGAATTTACTTGAACGGAATTCCTTTGATGTTTCTGTCCTAAATCTTTATCTGAATCATGAGTTTCTGATGTTGTTGGAATAGCAGCAGCAAGTTCAGATTCTCTTGTTGTGCTTCTGTCTTCCTCGAAGCAAGAAAGTGTATTTAACTTCACCGTATCAATATTTTCTTGTGTTAAAGGAATTACACCGGTGGTTGGAGTTATTTCAGATCCATTTGTTTTTTCTGTGCTACATGCTGGTGAAATATTCTTGTTTTTGGGCTCTCCAAGGATCAAATTTCCCATCTTATTGTTTAGTGCTACTGAGGATTCACAACAAACACCATCTACAACTCTTTCAAGGTCTTTTTGTGTATTGATAGTCACATGATGTATTTCTGAAGCTTCACTTGGTGCTGTTTGCTTCATGGTATCCTCGTCTACTTGTGTTGAATAAGCTTCATCACTTATTATAATAACCTCAGATCTTCTTGTTTTTTCTTGGATACAGAACACAGAGTCACTCCTTGTATCACACTCCCCATTGCTTAAATTTCTAACCTTATTACCTAGTGCCCCTAAGGATCCATATCCAATCCCACTTTCAACTCTTTCAGAGTCTTGTGTTTCGGAAGCTGCATTTATAGATTTAGCAACTAGATTCCTGGTACCAATCTCAGCATCAACTGTTATTTTGGGCTCTTTGCTCCTAGGAGATTCACCAGAAACATTGGGGCCATCGTGTATGTCTTCAGAGTCCTGATACTGACCATTATAATGTGATATCAAATCATCAGATAATGTATGCCTTTCTTTCCTTTTCTTCACAGCACCTTTTCCTCCGCTTTTGACACTGAAATGTAGTCTTTCACAAGAATCAATACCAAACACCCGCACAGAAAATGTTGATTCTGGTGTGTACTCAAATAATAGAAATTCACCCCACTTAATACAATGTTCTGAAACGAAACTGTTCCATCCCTCATAAAAAGCTAGGGAACCATCCACCACCGATAGCCTGATCTTTGAACACTTCCCCTCTGAGTCTTCAAGATATACATGGCGATCAATTAAATCCTTAAGGCTGGGTGCAACTGCTGGTGGTATGAACTGCACAAGAATAAATCAACATTATGTGCATATAATATTTAAGGATAATCATCATGGTACAGTACAAGAAGAAAAAACAATGACAAAAAAGACACTAAAATGAACAAGAAAAAACAGAGCTGAAATTACGGAGACTTTTTAGGGTGCTTGAGAGCTATGGAGAGATATTTAAGCAGCGAGGCAGGTGCCAACTTAAAAATAAGACAGAAAGTTGGATACTTCATGCATCCATGTAAACAGAGAGAAAAAGAAAACATAACTGCTTATCTGATCCTTTCGGCCAAAATATTTTTTTATCATTATGGTCGCAACAAGAAAGATGACTAGTTGCTTAATGGCCATGTCAATGGCAGCAAAAGGCTACTACAGCACCATAACGATGCACTACGGAGAACAGGCCATACATTCATTGGGTTTTTTTCTGATTCTCCGAAGGTTACAAGAGGTACCACTCCAAGGAGAGCTGGAGAGGTACATAAGTCTCCAAAGATGAGAGAAAACCTCCACACGATGTTATAAACTCTGGCACCTCTTGCTCTTGGCTCCTTTTCAAGAATGGTAAAAAGGATGTAACTGAATAATTTACAAGGTCAAATTGAAACTGACTCTGTTCGTACAAGGCCTCTTCATCATTCCTCTGTGTAGTTGATTTAGTCCTGGTTGTCAATGGCAGGCAGGATTGTAGAAAGAAGAATACAGCATATGGTCACCTTTAAATTAACCAATGACCGATAATATTAGATGATATTAATTTCCAAGTACCTTCCAAGTTTCAAGCACAAATAAAAGTCTCAAGGTCATGGATAGCTAATTAAAGAAGAGCTTATGAGCAACAGACATAATCAAGTATGTGTAGGAATTAGAAATCTGCACACACCAGTAATTCCTCGAACTCGTCGCGCACAAATTTGAAGAATGCGAAGGCTGCTTTCCTTTTCTTCTTCTTGCCATCCCTACAATTTTTTTTCTCATTTCCTATAGCAACAATACAAGCCTTCTTCGTCTCCTTTTTATTGTCACTGCTAGCCACTCGCTCCTTCTGCTCCCTCTTCAATGGTGTAGATGGCGCCTTCCTCTTCTTTTCCTTGTTTTTAGTGCTAAATGTCTGAGCTGTCCTCTCATCAGGTTGAACGAATGATGCATCCCGCTTCTTTTTCTTCATCTTCATCTCCATACTGTCACTAGGTCGCATTTTCCTCTCCTTTGCAACAAGTGTATTAGACAAAGTCCTCTTGTTCGTTCCATCTTTCTCCATCTTACCCTTGTTGACTGAGAGCGGCACTGTCTTCTTATAGCTGTCACCGTCACTCTTCATATTCTTCTCACCATTCTGGTTGCTCGTGCGCTGCATTTTTATTTTCCGCATCTTTTCAAAGAATGGAGTGGTCACCTTCCTACTCTTAGCCTTCTTGTCGCCATTCAACAACTTCTTCCCCCTTTGCTCAGCATCGCTTCCAGCCTTCCTATTCTTTCTCCAGTCACTGTGTGACGTCGCCTCTTTGCTGGCATCGTTTACCACACTCTTCTTCAGGTCATCACTGCACTTCCTCTTCCTCTTCCTCTTCTCTTCATCGGCATCATTTCGCGAGTTCTTCTTCATGTCATGACGACTGCGCTTCTTCTTCTCTTCGTCATCACCATCTCGCATGTCATCACTGCTCTTCCTCTTCTCTTCGTCGGCATCATTTCGCAGGTTCTTCTTCATGTCTTGACGACTGCACTTCTTCTCTTCGTCATCACCATCTCGCATGTCATCGCTGCTCTTCCTCTTCTCTTCGTTGGCATCATTTCGCAAGTTCTTCTTCATGTCGTGACGACTGCACTTCTTCTTCTCTTCGAAATCACCATCTCGCATGTCATCGCTGCTCTTCCTCTTCTCTTCGTTGGCATCATTTCGCAAGTTGTTCTTCATGTCGTGATGACTGTACTTCTTCTCTTCGTCATCACCATTTCGCATGTCATCACTGCAGTTCCGGTTCTTCTTTTTCGTTTTGTTGAAGCTCCTGAGCCTCCCCACGCATCCCTGCCCTCGAACAGCACCATCCATCCTTATAAACACCAATAAATCCCCAGTACAGTCTAGTCTAAAGCAATCACTGATGAATCTCTCCAATCACCTGGAACAAACAGCGGACCAAAGAAAGCATCAAATCAGCAGTAAAAACAAAAATGAGGCTACATTATTGACAGGAAGCAACAGAAAAAAGCGTCACCCGAACTCAATGTGCGATACTGCTCAAGTTCACCCCCAAAATGTAATAATAACCTCTCAACCTACTTCCTCGTCTCAGTCATCCCTCATTTTATTCATCTCTCTCATTAATTTCACTCCTTACATTTTGCAACAGATGGAGTAGCATAGAAGGAAATAAACTTAGGGGGTGTTTAGATCCAGGGGTGTAAAGTTTTGGCGTGTCACATCGGGTATTATATAGGGTGTTCAGACACTAATAAAAAAAACTAATTACAGAATTCATCGGTAAACCGCGAGACGAATTTATTAAGCCTAATTAATCCGTCATTAGCAAATGTTTACTGTAGTACCACATTGTCAAATCATAGAGCAATTAGGCTTAAAAGATTCATCTCGCAAATTAGTCGCAGTCTATACAATTAGTTATTTTTTTAGCCTATATTTAATACTTCATATATGTGTTTAAACCTTCAATGTGACAGGGTGAAAAATTTTAGGGTGAGATCTAAACAGGGCCTTGTAATCATCTTCTAGCCACAACTCACAAGAGCAGAGCTTGAACTTTACCTACATTTGGTTCTAGAAACAGTATTGCCGGGTCGATGTCCCTCTGACCATCTCCGAGCGGAAACACCACCCCAAATGCACCTTCTCGATCTTGGGGATAACACCACCTCGAGTTGGACAGACCAGCGCTGCTACCGCGCTTCCCCCCGATGCGGAAGCTGCCAGGCGGCGGCGGAGGGGAGGGAGAGGAGGGGGAGGTGGATGGCGCGGAGCGGGAAGGAGAAGAGGCGGCAAGCCGTCTCCCGT
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| CDS seq | ATGGATGGTGCTGTTCGAGGGCAGGGATGCGTGGGGAGGCTCAGGAGCTTCAACAAAACGAAAAAGAAGAACCGGAACTGCAGTGATGACATGCGAAATGGTGATGACGAAGAGAAGAAGTACAGTCATCACGACATGAAGAACAACTTGCGAAATGATGCCAACGAAGAGAAGAGGAAGAGCAGCGATGACATGCGAGATGGTGATTTCGAAGAGAAGAAGAAGTGCAGTCGTCACGACATGAAGAAGAACTTGCGAAATGATGCCAACGAAGAGAAGAGGAAGAGCAGCGATGACATGCGAGATGGTGATGACGAAGAGAAGAAGTGCAGTCGTCAAGACATGAAGAAGAACCTGCGAAATGATGCCGACGAAGAGAAGAGGAAGAGCAGTGATGACATGCGAGATGGTGATGACGAAGAGAAGAAGAAGCGCAGTCGTCATGACATGAAGAAGAACTCGCGAAATGATGCCGATGAAGAGAAGAGGAAGAGGAAGAGGAAGTGCAGTGATGACCTGAAGAAGAGTGTGGTAAACGATGCCAGCAAAGAGGCGACGTCACACAGTGACTGGAGAAAGAATAGGAAGGCTGGAAGCGATGCTGAGCAAAGGGGGAAGAAGTTGTTGAATGGCGACAAGAAGGCTAAGAGTAGGAAGGTGACCACTCCATTCTTTGAAAAGATGCGGAAAATAAAAATGCAGCGCACGAGCAACCAGAATGGTGAGAAGAATATGAAGAGTGACGGTGACAGCTATAAGAAGACAGTGCCGCTCTCAGTCAACAAGGGTAAGATGGAGAAAGATGGAACGAACAAGAGGACTTTGTCTAATACACTTGTTGCAAAGGAGAGGAAAATGCGACCTAGTGACAGTATGGAGATGAAGATGAAGAAAAAGAAGCGGGATGCATCATTCGTTCAACCTGATGAGAGGACAGCTCAGACATTTAGCACTAAAAACAAGGAAAAGAAGAGGAAGGCGCCATCTACACCATTGAAGAGGGAGCAGAAGGAGCGAGTGGCTAGCAGTGACAATAAAAAGGAGACGAAGAAGGCTTGTATTGTTGCTATAGGAAATGAGAAAAAAAATTGTAGGGATGGCAAGAAGAAGAAAAGGAAAGCAGCCTTCGCATTCTTCAAATTTGTGCGCGACGAGTTCGAGGAATTACTGTTCATACCACCAGCAGTTGCACCCAGCCTTAAGGATTTAATTGATCGCCATGTATATCTTGAAGACTCAGAGGGGAAGTGTTCAAAGATCAGGCTATCGGTGGTGGATGGTTCCCTAGCTTTTTATGAGGGATGGAACAGTTTCGTTTCAGAACATTGTATTAAGTGGGGTGAATTTCTATTATTTGAGTACACACCAGAATCAACATTTTCTGTGCGGGTGTTTGGTATTGATTCTTGTGAAAGACTACATTTCAGTGTCAAAAGCGGAGGAAAAGGTGCTGTGAAGAAAAGGAAAGAAAGGCATACATTATCTGATGATTTGATATCACATTATAATGGTCAGTATCAGGACTCTGAAGACATACACGATGGCCCCAATGTTTCTGGTGAATCTCCTAGGAGCAAAGAGCCCAAAATAACAGTTGATGCTGAGATTGGTACCAGGAATCTAGTTGCTAAATCTATAAATGCAGCTTCCGAAACACAAGACTCTGAAAGAGTTGAAAGTGGGATTGGATATGGATCCTTAGGGGCACTAGGTAATAAGGTTAGAAATTTAAGCAATGGGGAGTGTGATACAAGGAGTGACTCTGTGTTCTGTATCCAAGAAAAAACAAGAAGATCTGAGGTTATTATAATAAGTGATGAAGCTTATTCAACACAAGTAGACGAGGATACCATGAAGCAAACAGCACCAAGTGAAGCTTCAGAAATACATCATGTGACTATCAATACACAAAAAGACCTTGAAAGAGTTGTAGATGGTGTTTGTTGTGAATCCTCAGTAGCACTAAACAATAAGATGGGAAATTTGATCCTTGGAGAGCCCAAAAACAAGAATATTTCACCAGCATGTAGCACAGAAAAAACAAATGGATCTGAAATAACTCCAACCACCGGTGTAATTCCTTTAACACAAGAAAATATTGATACGGTGAAGTTAAATACACTTTCTTGCTTCGAGGAAGACAGAAGCACAACAAGAGAATCTGAACTTGCTGCTGCTATTCCAACAACATCAGAAACTCATGATTCAGATAAAGATTTAGGACAGAAACATCAAAGGAATTCCGTTCAAGTAAATTCTATCATAGCTGTTGATAAATATCCTAATGATAGTGAGATGAATATTAGTGGAAATATTTTCAGAATATATGAAGCTCCAGCGGGTACTCGGTGCTTGGAGAAGTGGAAAAGGGGTATTGTGAACGGTCGAGCAGCTCTTGATGACATTGGACAGGTTAGACCTGAAAAAACACAAAAAGCTGGAGAGAAGTTAGTTGGTAATTGTGGTGCAATGGGAGAAAGTCCAGTTGATCTACGGATAGAGTCTGATGTTACTGATACCTGCCTCAAACCAATTCTCAACATACCTATTGAAGAACTCTCGATTCTTGATAGCGTATCAATATCCAAATGCGGACGTAGCAGGACAGAGGTCAACCATTTGTTCAATCAAAAAGGAGCTACTGTTCAACTGCAAACAAAAAAGGAGCCATTGAAACCAACTGGTAGCAGCGGAAATAGAAAGGGGGACAAAATTGCAGTGTCTGTCAACCGTGTATTTGCTCATCAATCAGAACTTCAGATCCCCCAGCAGGAAAATGGAAATTTTACCAGTTGTGTAACCCCAGTGGCTCTGCTGCCTGCTAAGGCTGAACTCCTGGATCTGGATGATCATTCCCTTCAATTCTGCATCCCTTCTACCATTCAGAAATGGCTTGAGTTGCCCAAATCGCTTCCAATCACTTGTCGGCAAAAAGGAAGGTATGACCGGAACGTCGTAATCCTCAAGGATCCCATGAGGAGGCTATGGCCGGTCTTCTACCATGACAAACCGGTCTTCGTAGGCTTCACCGCGGGCTGGAAACCTTTTGCTGCAGCAAACAACCTCCAGGCTGGGGATGTCTGCAAGTTTGTGAAAGAGATGGACGAAGATGAGCTTGCGTTCCAGGTTTATATCACAAGAAAGTGA
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| Protein seq | MDGAVRGQGCVGRLRSFNKTKKKNRNCSDDMRNGDDEEKKYSHHDMKNNLRNDANEEKRKSSDDMRDGDFEEKKKCSRHDMKKNLRNDANEEKRKSSDDMRDGDDEEKKCSRQDMKKNLRNDADEEKRKSSDDMRDGDDEEKKKRSRHDMKKNSRNDADEEKRKRKRKCSDDLKKSVVNDASKEATSHSDWRKNRKAGSDAEQRGKKLLNGDKKAKSRKVTTPFFEKMRKIKMQRTSNQNGEKNMKSDGDSYKKTVPLSVNKGKMEKDGTNKRTLSNTLVAKERKMRPSDSMEMKMKKKKRDASFVQPDERTAQTFSTKNKEKKRKAPSTPLKREQKERVASSDNKKETKKACIVAIGNEKKNCRDGKKKKRKAAFAFFKFVRDEFEELLFIPPAVAPSLKDLIDRHVYLEDSEGKCSKIRLSVVDGSLAFYEGWNSFVSEHCIKWGEFLLFEYTPESTFSVRVFGIDSCERLHFSVKSGGKGAVKKRKERHTLSDDLISHYNGQYQDSEDIHDGPNVSGESPRSKEPKITVDAEIGTRNLVAKSINAASETQDSERVESGIGYGSLGALGNKVRNLSNGECDTRSDSVFCIQEKTRRSEVIIISDEAYSTQVDEDTMKQTAPSEASEIHHVTINTQKDLERVVDGVCCESSVALNNKMGNLILGEPKNKNISPACSTEKTNGSEITPTTGVIPLTQENIDTVKLNTLSCFEEDRSTTRESELAAAIPTTSETHDSDKDLGQKHQRNSVQVNSIIAVDKYPNDSEMNISGNIFRIYEAPAGTRCLEKWKRGIVNGRAALDDIGQVRPEKTQKAGEKLVGNCGAMGESPVDLRIESDVTDTCLKPILNIPIEELSILDSVSISKCGRSRTEVNHLFNQKGATVQLQTKKEPLKPTGSSGNRKGDKIAVSVNRVFAHQSELQIPQQENGNFTSCVTPVALLPAKAELLDLDDHSLQFCIPSTIQKWLELPKSLPITCRQKGRYDRNVVILKDPMRRLWPVFYHDKPVFVGFTAGWKPFAAANNLQAGDVCKFVKEMDEDELAFQVYITRK |
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| Function | B3 domain-containing protein Os02g0598200 [UniProtKB/Swiss-Prot:Q6K5K2] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os02g38470 | LOC_Os02g38470.1 | Chr02 | 23255086 | 23262297 | - | MSU_osa1r7 | ||
| CDS seq | ATGGATGGTGCTGTTCGAGGGCAGGGATGCGTGGGGAGGCTCAGGAGCTTCAACAAAACGAAAAAGAAGAACCGGAACTGCAGTGATGACATGCGAAATGGTGATGACGAAGAGAAGAAGTACAGTCATCACGACATGAAGAACAACTTGCGAAATGATGCCAACGAAGAGAAGAGGAAGAGCAGCGATGACATGCGAGATGGTGATTTCGAAGAGAAGAAGAAGTGCAGTCGTCACGACATGAAGAAGAACTTGCGAAATGATGCCAACGAAGAGAAGAGGAAGAGCAGCGATGACATGCGAGATGGTGATGACGAAGAGAAGAAGTGCAGTCGTCAAGACATGAAGAAGAACCTGCGAAATGATGCCGACGAAGAGAAGAGGAAGAGCAGTGATGACATGCGAGATGGTGATGACGAAGAGAAGAAGAAGCGCAGTCGTCATGACATGAAGAAGAACTCGCGAAATGATGCCGATGAAGAGAAGAGGAAGAGGAAGAGGAAGTGCAGTGATGACCTGAAGAAGAGTGTGGTAAACGATGCCAGCAAAGAGGCGACGTCACACAGTGACTGGAGAAAGAATAGGAAGGCTGGAAGCGATGCTGAGCAAAGGGGGAAGAAGTTGTTGAATGGCGACAAGAAGGCTAAGAGTAGGAAGGTGACCACTCCATTCTTTGAAAAGATGCGGAAAATAAAAATGCAGCGCACGAGCAACCAGAATGGTGAGAAGAATATGAAGAGTGACGGTGACAGCTATAAGAAGACAGTGCCGCTCTCAGTCAACAAGGGTAAGATGGAGAAAGATGGAACGAACAAGAGGACTTTGTCTAATACACTTGTTGCAAAGGAGAGGAAAATGCGACCTAGTGACAGTATGGAGATGAAGATGAAGAAAAAGAAGCGGGATGCATCATTCGTTCAACCTGATGAGAGGACAGCTCAGACATTTAGCACTAAAAACAAGGAAAAGAAGAGGAAGGCGCCATCTACACCATTGAAGAGGGAGCAGAAGGAGCGAGTGGCTAGCAGTGACAATAAAAAGGAGACGAAGAAGGCTTGTATTGTTGCTATAGGAAATGAGAAAAAAAATTGTAGGGATGGCAAGAAGAAGAAAAGGAAAGCAGCCTTCGCATTCTTCAAATTTGTGCGCGACGAGTTCGAGGAATTACTGTTCATACCACCAGCAGTTGCACCCAGCCTTAAGGATTTAATTGATCGCCATGTATATCTTGAAGACTCAGAGGGGAAGTGTTCAAAGATCAGGCTATCGGTGGTGGATGGTTCCCTAGCTTTTTATGAGGGATGGAACAGTTTCGTTTCAGAACATTGTATTAAGTGGGGTGAATTTCTATTATTTGAGTACACACCAGAATCAACATTTTCTGTGCGGGTGTTTGGTATTGATTCTTGTGAAAGACTACATTTCAGTGTCAAAAGCGGAGGAAAAGGTGCTGTGAAGAAAAGGAAAGAAAGGCATACATTATCTGATGATTTGATATCACATTATAATGGTCAGTATCAGGACTCTGAAGACATACACGATGGCCCCAATGTTTCTGGTGAATCTCCTAGGAGCAAAGAGCCCAAAATAACAGTTGATGCTGAGATTGGTACCAGGAATCTAGTTGCTAAATCTATAAATGCAGCTTCCGAAACACAAGACTCTGAAAGAGTTGAAAGTGGGATTGGATATGGATCCTTAGGGGCACTAGGTAATAAGGTTAGAAATTTAAGCAATGGGGAGTGTGATACAAGGAGTGACTCTGTGTTCTGTATCCAAGAAAAAACAAGAAGATCTGAGGTTATTATAATAAGTGATGAAGCTTATTCAACACAAGTAGACGAGGATACCATGAAGCAAACAGCACCAAGTGAAGCTTCAGAAATACATCATGTGACTATCAATACACAAAAAGACCTTGAAAGAGTTGTAGATGGTGTTTGTTGTGAATCCTCAGTAGCACTAAACAATAAGATGGGAAATTTGATCCTTGGAGAGCCCAAAAACAAGAATATTTCACCAGCATGTAGCACAGAAAAAACAAATGGATCTGAAATAACTCCAACCACCGGTGTAATTCCTTTAACACAAGAAAATATTGATACGGTGAAGTTAAATACACTTTCTTGCTTCGAGGAAGACAGAAGCACAACAAGAGAATCTGAACTTGCTGCTGCTATTCCAACAACATCAGAAACTCATGATTCAGATAAAGATTTAGGACAGAAACATCAAAGGAATTCCGTTCAAGTAAATTCTATCATAGCTGTTGATAAATATCCTAATGATAGTGAGATGAATATTAGTGGAAATATTTTCAGAATATATGAAGCTCCAGCGGGTACTCGGTGCTTGGAGAAGTGGAAAAGGGGTATTGTGAACGGTCGAGCAGCTCTTGATGACATTGGACAGGTTAGACCTGAAAAAACACAAAAAGCTGGAGAGAAGTTAGTTGGTAATTGTGGTGCAATGGGAGAAAGTCCAGTTGATCTACGGATAGAGTCTGATGTTACTGATACCTGCCTCAAACCAATTCTCAACATACCTATTGAAGAACTCTCGATTCTTGATAGCGTATCAATATCCAAATGCGGACGTAGCAGGACAGAGGTCAACCATTTGTTCAATCAAAAAGGAGCTACTGTTCAACTGCAAACAAAAAAGGAGCCATTGAAACCAACTGGTAGCAGCGGAAATAGAAAGGGGGACAAAATTGCAGTGTCTGTCAACCGTGTATTTGCTCATCAATCAGAACTTCAGATCCCCCAGCAGGAAAATGGAAATTTTACCAGTTGTGTAACCCCAGTGGCTCTGCTGCCTGCTAAGGCTGAACTCCTGGATCTGGATGATCATTCCCTTCAATTCTGCATCCCTTCTACCATTCAGAAATGGCTTGAGTTGCCCAAATCGCTTCCAATCACTTGTCGGCAAAAAGGAAGGTATGACCGGAACGTCGTAATCCTCAAGGATCCCATGAGGAGGCTATGGCCGGTCTTCTACCATGACAAACCGGTCTTCGTAGGCTTCACCGCGGGCTGGAAACCTTTTGCTGCAGCAAACAACCTCCAGGCTGGGGATGTCTGCAAGTTTGTGAAAGAGATGGACGAAGATGAGCTTGCGTTCCAGGTTTATATCACAAGAAAGTGA
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| Protein seq | MDGAVRGQGCVGRLRSFNKTKKKNRNCSDDMRNGDDEEKKYSHHDMKNNLRNDANEEKRKSSDDMRDGDFEEKKKCSRHDMKKNLRNDANEEKRKSSDDMRDGDDEEKKCSRQDMKKNLRNDADEEKRKSSDDMRDGDDEEKKKRSRHDMKKNSRNDADEEKRKRKRKCSDDLKKSVVNDASKEATSHSDWRKNRKAGSDAEQRGKKLLNGDKKAKSRKVTTPFFEKMRKIKMQRTSNQNGEKNMKSDGDSYKKTVPLSVNKGKMEKDGTNKRTLSNTLVAKERKMRPSDSMEMKMKKKKRDASFVQPDERTAQTFSTKNKEKKRKAPSTPLKREQKERVASSDNKKETKKACIVAIGNEKKNCRDGKKKKRKAAFAFFKFVRDEFEELLFIPPAVAPSLKDLIDRHVYLEDSEGKCSKIRLSVVDGSLAFYEGWNSFVSEHCIKWGEFLLFEYTPESTFSVRVFGIDSCERLHFSVKSGGKGAVKKRKERHTLSDDLISHYNGQYQDSEDIHDGPNVSGESPRSKEPKITVDAEIGTRNLVAKSINAASETQDSERVESGIGYGSLGALGNKVRNLSNGECDTRSDSVFCIQEKTRRSEVIIISDEAYSTQVDEDTMKQTAPSEASEIHHVTINTQKDLERVVDGVCCESSVALNNKMGNLILGEPKNKNISPACSTEKTNGSEITPTTGVIPLTQENIDTVKLNTLSCFEEDRSTTRESELAAAIPTTSETHDSDKDLGQKHQRNSVQVNSIIAVDKYPNDSEMNISGNIFRIYEAPAGTRCLEKWKRGIVNGRAALDDIGQVRPEKTQKAGEKLVGNCGAMGESPVDLRIESDVTDTCLKPILNIPIEELSILDSVSISKCGRSRTEVNHLFNQKGATVQLQTKKEPLKPTGSSGNRKGDKIAVSVNRVFAHQSELQIPQQENGNFTSCVTPVALLPAKAELLDLDDHSLQFCIPSTIQKWLELPKSLPITCRQKGRYDRNVVILKDPMRRLWPVFYHDKPVFVGFTAGWKPFAAANNLQAGDVCKFVKEMDEDELAFQVYITRK
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.043085 | 0.043945 | 0.000000 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0598200 | RBH | 0.063795 | 0.065423 | 0.000000 |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0598200 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0023640 | RBH | 0.0 | 0.0 | 1.442608 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0023730 | RBH | 0.0 | 0.0 | 0.623127 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0023710 | RBH | 0.0 | 0.0 | 2.140739 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0023410 | RBH | 0.000000 | 0.023704 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0023330 | RBH | 0.0 | 1.056316 | 2.000968 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0381400 | RBH | 0.2361085 | 0.7994035 | 0.7119655 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0023100 | RBH | 0.0 | 0.0 | 0.169655 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0410000 | RBH | 0.259983 | 0.6594145 | 2.2914035 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0023490 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0023360 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0023680 | RBH | 0.0 | 1.918758 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0023400 | RBH | 0.0 | 0.000000 | 0.068435 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0023200 | RBH | 0.0 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G023620 | RBH | 0.0 | 0.000000 | 0.435093 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0023490 | RBH | 0.0 | 4.837016 | 0.959639 |
