Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os02g38090 | OGI:02065740 | 14/16 | Nipponbare | IRGSP 1.0 | MSU | Chr02:23024797-23025834 | ||||||||
| Gene Symbol | ERF79, OsERF#079, OsERF079, OsERF79, AP2/EREBP#017, AP2/EREBP17 | ||||||||||
| DNA seq | ATGCAGGCGCAGCAGGCCATGGACGAGCCCGCCAACGCGCAGCTGTACGGCCACGCTCACGCGCACTCGCACCACCACCGGAGCAAGCGCCCGTCGCCCGGTGGCGGCGGCGGCGGCGCGGCGACTCTGGGCGCGGACGGTGGCGGTGGCGGCGGCTCTCTCAGCGGGACGCGGTACCGCGGCGTGCGGCGCAGGCCGTGGGGACGGTTCGCAGCGGAGATCCGGGACCCGGCGTCCAAGGAGCGGCGCTGGCTCGGCACGTTCGACACCGCCGAGCAGGCCGCCTGCGCCTACGACGTCGCCGCGCGCGCCATGCGCGGCACCAGGGCGCGCACCAACTTCCCCGTCCCCGCCGCCGCCGGCTTCCCGGGGGGAGGCGGCGGCGGGTGCTGGCCGTGGGTTAACATCCCGCCGCAGGGCGCGGCGGCGGCGGCGTCGCACCAGCAGCCGCTCAACACGCTCCTCCTCCACAACCTCCTCATGAGCTCCTCCCCCCACGGCTGCCTCCTCCTGCACCACGCCGGCCACGGCCACGGCCACGCCCATTCCCATTCCCACTCCCACAGCCGCGCACACAACCCCAGTACTCGCCCACCCACCTCCGCGCCGCCGCCGCCTCCACCTGCCGCCGCCTCATCCGCCACGACCGCGCCGGCCACCACGACAGGCGCCGCAGCGACGTCCGCGCCGGGAGCGGACGACGACGCGTGGGGCTTCCTCCTGCGACGTGAGCCGCCGGAGGCGGGGCTCCTGCAAGACGTCCTGCACGGGTTCTACCCGACCAGGCGGCCGCACGACGACGCGGGGCCGGCGCCGAAGCTGGAGCGGCCGTACGAGGCGACGTCGTCGTACCGCGTGTCCTCCCCCTGGGGCGCCGTCGAGGACTGCGACGACGGCGACGGCGACGGCGACGACGACTACCGCGGGTTCCCGATGATGCCGCAGGGGCTCCTCGAGGACGTGATCCAGTGCCCGCCCTACATGGAGGTCTTGGCGGCGCCGTCGGCCGCCGTCGGCCGCGTCAGCCGCAGGGGCTGA
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| CDS seq | ATGCAGGCGCAGCAGGCCATGGACGAGCCCGCCAACGCGCAGCTGTACGGCCACGCTCACGCGCACTCGCACCACCACCGGAGCAAGCGCCCGTCGCCCGGTGGCGGCGGCGGCGGCGCGGCGACTCTGGGCGCGGACGGTGGCGGTGGCGGCGGCTCTCTCAGCGGGACGCGGTACCGCGGCGTGCGGCGCAGGCCGTGGGGACGGTTCGCAGCGGAGATCCGGGACCCGGCGTCCAAGGAGCGGCGCTGGCTCGGCACGTTCGACACCGCCGAGCAGGCCGCCTGCGCCTACGACGTCGCCGCGCGCGCCATGCGCGGCACCAGGGCGCGCACCAACTTCCCCGTCCCCGCCGCCGCCGGCTTCCCGGGGGGAGGCGGCGGCGGGTGCTGGCCGTGGGTTAACATCCCGCCGCAGGGCGCGGCGGCGGCGGCGTCGCACCAGCAGCCGCTCAACACGCTCCTCCTCCACAACCTCCTCATGAGCTCCTCCCCCCACGGCTGCCTCCTCCTGCACCACGCCGGCCACGGCCACGGCCACGCCCATTCCCATTCCCACTCCCACAGCCGCGCACACAACCCCAGTACTCGCCCACCCACCTCCGCGCCGCCGCCGCCTCCACCTGCCGCCGCCTCATCCGCCACGACCGCGCCGGCCACCACGACAGGCGCCGCAGCGACGTCCGCGCCGGGAGCGGACGACGACGCGTGGGGCTTCCTCCTGCGACGTGAGCCGCCGGAGGCGGGGCTCCTGCAAGACGTCCTGCACGGGTTCTACCCGACCAGGCGGCCGCACGACGACGCGGGGCCGGCGCCGAAGCTGGAGCGGCCGTACGAGGCGACGTCGTCGTACCGCGTGTCCTCCCCCTGGGGCGCCGTCGAGGACTGCGACGACGGCGACGGCGACGGCGACGACGACTACCGCGGGTTCCCGATGATGCCGCAGGGGCTCCTCGAGGACGTGATCCAGTGCCCGCCCTACATGGAGGTCTTGGCGGCGCCGTCGGCCGCCGTCGGCCGCGTCAGCCGCAGGGGCTGA
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| Protein seq | MQAQQAMDEPANAQLYGHAHAHSHHHRSKRPSPGGGGGGAATLGADGGGGGGSLSGTRYRGVRRRPWGRFAAEIRDPASKERRWLGTFDTAEQAACAYDVAARAMRGTRARTNFPVPAAAGFPGGGGGGCWPWVNIPPQGAAAAASHQQPLNTLLLHNLLMSSSPHGCLLLHHAGHGHGHAHSHSHSHSRAHNPSTRPPTSAPPPPPPAAASSATTAPATTTGAAATSAPGADDDAWGFLLRREPPEAGLLQDVLHGFYPTRRPHDDAGPAPKLERPYEATSSYRVSSPWGAVEDCDDGDGDGDDDYRGFPMMPQGLLEDVIQCPPYMEVLAAPSAAVGRVSRRG |
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| Function | Ethylene-responsive transcription factor ESR2 [UniProtKB/Swiss-Prot:Q9FYK5] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os02g38090 | LOC_Os02g38090.1 | Chr02 | 23024797 | 23025834 | + | MSU_osa1r7 | ||
| CDS seq | ATGCAGGCGCAGCAGGCCATGGACGAGCCCGCCAACGCGCAGCTGTACGGCCACGCTCACGCGCACTCGCACCACCACCGGAGCAAGCGCCCGTCGCCCGGTGGCGGCGGCGGCGGCGCGGCGACTCTGGGCGCGGACGGTGGCGGTGGCGGCGGCTCTCTCAGCGGGACGCGGTACCGCGGCGTGCGGCGCAGGCCGTGGGGACGGTTCGCAGCGGAGATCCGGGACCCGGCGTCCAAGGAGCGGCGCTGGCTCGGCACGTTCGACACCGCCGAGCAGGCCGCCTGCGCCTACGACGTCGCCGCGCGCGCCATGCGCGGCACCAGGGCGCGCACCAACTTCCCCGTCCCCGCCGCCGCCGGCTTCCCGGGGGGAGGCGGCGGCGGGTGCTGGCCGTGGGTTAACATCCCGCCGCAGGGCGCGGCGGCGGCGGCGTCGCACCAGCAGCCGCTCAACACGCTCCTCCTCCACAACCTCCTCATGAGCTCCTCCCCCCACGGCTGCCTCCTCCTGCACCACGCCGGCCACGGCCACGGCCACGCCCATTCCCATTCCCACTCCCACAGCCGCGCACACAACCCCAGTACTCGCCCACCCACCTCCGCGCCGCCGCCGCCTCCACCTGCCGCCGCCTCATCCGCCACGACCGCGCCGGCCACCACGACAGGCGCCGCAGCGACGTCCGCGCCGGGAGCGGACGACGACGCGTGGGGCTTCCTCCTGCGACGTGAGCCGCCGGAGGCGGGGCTCCTGCAAGACGTCCTGCACGGGTTCTACCCGACCAGGCGGCCGCACGACGACGCGGGGCCGGCGCCGAAGCTGGAGCGGCCGTACGAGGCGACGTCGTCGTACCGCGTGTCCTCCCCCTGGGGCGCCGTCGAGGACTGCGACGACGGCGACGGCGACGGCGACGACGACTACCGCGGGTTCCCGATGATGCCGCAGGGGCTCCTCGAGGACGTGATCCAGTGCCCGCCCTACATGGAGGTCTTGGCGGCGCCGTCGGCCGCCGTCGGCCGCGTCAGCCGCAGGGGCTGA
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| Protein seq | MQAQQAMDEPANAQLYGHAHAHSHHHRSKRPSPGGGGGGAATLGADGGGGGGSLSGTRYRGVRRRPWGRFAAEIRDPASKERRWLGTFDTAEQAACAYDVAARAMRGTRARTNFPVPAAAGFPGGGGGGCWPWVNIPPQGAAAAASHQQPLNTLLLHNLLMSSSPHGCLLLHHAGHGHGHAHSHSHSHSRAHNPSTRPPTSAPPPPPPAAASSATTAPATTTGAAATSAPGADDDAWGFLLRREPPEAGLLQDVLHGFYPTRRPHDDAGPAPKLERPYEATSSYRVSSPWGAVEDCDDGDGDGDDDYRGFPMMPQGLLEDVIQCPPYMEVLAAPSAAVGRVSRRG
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0594300 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0594300 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0023320 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0023430 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0023400 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0023120 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0023000 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0555700 | SBH | 0.1631305 | 1.8308545 | 3.1629535 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0022790 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0586100 | SBH | 0.3495395 | 0.3695085 | 4.7906725 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0023180 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0023010 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0023350 | RBH | 0.0 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0023070 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0022880 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G023320 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0023170 | RBH | 0.0 | 0.0 | 0.0 |
