Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os02g17304 | OGI:02027930 | 15/16 | Nipponbare | IRGSP 1.0 | MSU | Chr02:9922465-9928349 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | GGCCAAAAACGTCACATCAAAATATTTGGACATATGCATGGGGCATTAAATGTGGGAAAAAAAACCAATTGCACAGTTTGCATGTAAATTGCGAGACGAATCTTTTGAGCCTAATTACGTCATGATTTAACAATGTGATGCTACAGTAAACATTTGCTAATGATGGATTAATTAGGCTTAATAAATCTGTCTCACAGTTTACAAGCGGAATCTATAATTTGTTTTGTTATTAGTCTACGTTTGCTATTCGTCTGGCTTGTTTTCATACGGCGTTCATTGTACCTTTGAATGTCGAGAGTGGGACAGTTGGGGTGGGAAACCGCTGCAGCCCTGGCGTCATCCTCCGAAGACTCCACCTCGGCAGCAACGGCACCATTACAGTTGAATACAAGAGCGATAGACTTGAGGGCTGAAAGATGGTGCAGCCCAACAACCGGACCACCATGGACATCGAGCTGCCACCTTGCATACAACCAGAGTTTCAGCCTTTGGAGCTTTGGCATGGCTCCTGGTTCAAACATCAACCCCACTACCGAATCCCGAATTTCAAAATTGAACTTGCGTAAATTCTGGAAGCCTTGGCCGCTGATGACCCACCTCAAGTTGGAGACGTCAGAATTTGTGTCCAAGGTAAGAGATTGCAGAATGGGTAAACTTGCAAGGATCTCAAGGCCTCCCACTCCACCAACTTCTACACGTAGGCGGGTGAGGTTGACGAGCGATGCAAATTGGCTTGGTATGGTAGGGAACTCATCGTAAAAGACAAGTCTCCGTAGAGGGGGAATGAAACCACAAGAAATCATCAATGAAGCTATGACATCAGGGTTGCTTAATCCCCGCGCAAGACGCAATGATTGGAGGCTGCACTTGACAAGCTTGGAGAGAGAGGAGATGCATGCTGTCCTGTGGCCCTCCTTGCTGTTATCTTCGTTGGAATCTGACCACCAGATTCGAACATCTCTCAGTTTGCTCAGCTCACCTAGCCCATAGATAGATTTTACTGATGCTCTATCTAGATCAATACCCGACAACACCTCCAGAGCTTGCAGATTTCCTATTTCGTCAGGCAGCGGCACTCCAAAAGGGATGAGAAGGTGCACCAGTTTCTGTAGCTGGACAATGCTTGCAGGTAGTTTTTCAATACGAGTATATGCCAGATCAAGTGTTTGTAGATGCTGCAGCTTACCAATCTCTTCTGGGAGCTTGTGGATACCTCCTTTGATTCTCAAGTACTTAAGTTCACAAAAATGTCCAACATGTTTAATATAGTTGTCCCCCAGACGAAGTTTTATAGCCAGCACACGCAGGACTTGACATTTTGCAAATTCTGAAGGGACTACTGGCAAACTTTCATGCTTAAACATATGCAATGATCGGAGATGGGATAGGTCCTTTGATGCTTTAGGCATCTTCGAGCCTTCAGAAAAGCCACTTTGCAGGGATAACCTGCGAAACTTATTTGAAGTATAGTCACTGGGGTCACTATTATTCAGTATGGTAACAAAATTCTCCTCCTCAGCTTGTGACACAATAAAGTCGAGTATGACATCGTGTATTCTGCAGATTTTCACTCTACCATCTGCCCCAATCTTTGACGGTTGTATCATGCTTCTGTTTATAAGCTCATGCAAGTAGCTTTCTCCCGACTGCTCCGTACATGCTCTGCTCTGTCCAAGAATTAATCCTTCAGCTACCCAAAGCCGTATCAAACGTCTAGGATCAATATTAGAATCCTCTGGAAAGACACTTAAATATAACAAGCACGTCTTCAGATATTGAGGAAGATCAAAATAACTGAGAAACAATATCCTCTTCATTTTGTCAACAGGAGAATCTTTCTCAACCATAGAAGAGATAGAGTTCTTTATTTTGGTCCACACTTCCACTGTCGGATTCTTATTGGACAATAACCCAGCTATACTGATAATGGCTAATGGCAAGCCACCACATTTCTTCAAAATTACACTAGCTGCTTCCGTCAAATGTTTGGGGCAATCTTCGCTAGAAAAGACTCTTCTAAAAAATAATTTGCAGGAGTTCTCTTCACTTTGAGGCATGGCTTCGTACATATGCCCCACAAAGTCGCAACAACATGACTTTGCCACATCTCTTATGCGTGTTGTAGTAATTATTCTACTCTTGTTGTCATTGGCAGGCAAGGCTGACTTCAATTGTTTCCATGCATCTGTGCTCCAGATATCATCAATGATGAAAAAGTACCTACGTGGAAATGTTGTGGGAGTTGCATTAGTAAGGTTGCTGCATTGCAACTTCTGGTATTGTATTATTATTATTTCCAATGCAAAAATATATCATATTTTCCCTACGCACAAGTTAATAAGTTTATTAGACTGAAAAGTGCGAAGGCCAAATGTGAGAAAAGAATATCAAAATACGTTCTTTATTACTCTATTTTTTTAACTCGTCATTTGGGACACATTAATCTCATATTCTTTTTATACACATGTTTGATCATTTTTAATAGCATATTCATAAAAATATTAAAAGCAATAACTGCATGAAAGTATTTTTCACGACCAATCTGCTAATGTCATTTTGACACATTTATTTTTAGTACTTTTGTATATATTCCATATATTTGGAAATTGTATTTCCCTAATTCTACAATATGCTATCTTTTTTAGCGAGTGTATAAAAATAGTAGTAATACAAAGGAGAAAGATACACAAAAAAAATTCGAGTTTCCCCCATTTTCTTCATCTTGCTCCGCATCACAGCCACTAGTCCACCCCTTGGTGGAGATATTTAACCATTTGCCACATTTAAATGTGGCAATTAACTTTTTGCCACTGGACCCATATGTCATAGACACATGTGGACCCACATGTCATTGAGATAGGGGTGGCAAATAGTTATTTACCAAATCTAAAAGTGGCAAATAGTTAAAAGCCCCTGCAGGTTGCAGTCTCAGGCACACCACCGTCATGATTTTACGAGGTAGTGCCTAACACGTTGGCCTTGCATGCCCTCAACTCGAATGATATCTCAGCCAACATGCATGGTGGCAGTGACGGACATAGCTTATATAGATGGGGCGGAGAATGGAGATGCTCACTCGATAAGAGCAATCGAGCACAACACATATCGTATTAATAGTTCATTCGTATATCTGTCTCAATTTGTCAGGCGTTTATACCTTGTTATACCTAAATTTGATGACCCATGACTACTATAAGGGGATAAGGAGGTCTTGAGAGTGTGGGGCGACACGAGTCATAGTTGAGTCGGTCGACCCACCCTGCCTAATGGGTGGATCCACCCCTGCATGGTGACCTTTCTCTGTTGGCAATCAAACACCACATTCCACTTTAGGTCATGTTGGGTTAATTCCCACATGAGAGAATTGAAGGAAAATAATTTCACATCACAATAGATAAGAAATAAATCTCTTTCAAATCTCCCTTAATTTTATTGTGAGAGGGATTAACTGAACAGTAAAGATGACAATGGATCTTACGCTAGCTATTATCTCGGTTATGTCGATGTCAACCCAACCCAACCCCGTCCAAGCTCACTAGCCAATCAGGAAAAACTTTTGAGTAAATGGCATTTATGGTACACGAACTTGTATGGCAGGTGCAAATAGGTACAACAATAACTTGCAAATTGTTTATTCCGGTACAACAACTTGGCTAATTCGTGGAAACCTAGGCCAAAACAATGCACACAAGTAAAATTGATCTGATATGATCCCAAAATCCGGCAGACCTATGAAATAGGATCCTAGATTGGGAAGGACGGGGTGGGGGGAAGGGAAGAGGGGGGGGGGGTTTCGCCAGCTTTAGAGGGATGGTCATGTGAGGAGGCGCGATGAGCAGCGGAATGGGTGGGCGGCAAGGCGACGGCAGCTCCACCGAAGCCGCGATGAGCAGCGGAATGGGTGGGCAGCAAGGCAACAACAATGCCACTGAAGGTCTGAAGCCGCGAGGTCAAAGAGGGCGCAGATATAGGGGGAGGGGGCGGGGGACTCGCCAGCATTGTTGACAAGCTCCAACCAGCTCGCGAATTGTTCTAAGTTAATCATGTTCACAATTGTTCTACTAATGAACACAATTGTTCTAAGTTAATCATGTATTTTTTTCTACTAATGTCATTCACGTTACCAGTTAAATAAATATAATTATTATTTCCAACTATCAAAATGAAAAGGTGTAACTTATATAATTCAATCCGAATAAATGTGTATAAAGGAGTATGTTTTATACTTGAAGCTAAAGAAGTACTCCATCCATTGTAATTATAGTAATCTAGTGGAGTATTAGACACAACCTAGTAACCTAGTACAAAGTTACTAGTAGTAGTATGTTGAATGCAAGAGATTGGTGGAAATCAATTAATCGTTCAATTGGGAAATGGCCTTGGGATGACCGACGGTAACAACTTTCTCTTTCAACCTTAGGATCGAGATCCAATGTTCTAAAATAATTAGGGTGATATGGCTAAACGACGGAATAGAAAAATATTATTAATTACACAAAGTGAAGATAAACTATATGTATTGGCTTATATATAGGAATGGAAGAATGGTGGAAATCAATTAATCATTCCGTAGGATTGGGAAGCGGCTTTGGGATGACTAGCAGGAACAACTTTCTATTCCAACTTTAGGGTCGAGATCCAATCTTCTAAAAGATTTGGGGTGATGATGCTAAACCAATGGGCAGAAAGAAATACTATTAGTACTAAATAAGGATGAATATATAGGTTTATAGGATTAAGAGTTGCATTAACTTGCTAAAAAAAATTGATATACTCTCAGTTGGTTAAATCATGCAAATATATACTCCAATGGCTTGGAAAATGTCACAAGATCCATACTACCAAAATGTTCTACAAAATTAATTCATAATATTTTAATCGATGCTGTTGAACAATAAATCATGTATGGATAATTACCTCTTGTCTTCTAAGTTCTTCCTCAACTTCGGTATAAGTTGTTCCATCTCCCAGTCGTTTGACTTTTCATACTCGCGCTCGTTAATCTGAAAGAGTATGTCTCTAAGAAGCTTCTTGATATCAGGAGTCCGAGATACAGAGACCATAGCCCGACAATCAAATGATTCATCAATCTTGTGATACACCTCCATAGCTAGAGTAGTCTTGCCCAACCCTCCCGTTCCAAAGATGGACACCACCTTCAGTTGCTTCTCTTCGCTCTTTATCCAGCCAATTATCTGTTCCCGAGGCTTATCAATGCCCACAAGGTTTTTGGCTTGCTCATACAAGGCTGGTACTCGAGGATCCAAGCGCACATGTTGGGGTGCAACCATGAGCCGATCCGCGATCTTATACCGTTCATGCCTCTCTTTCTCTTCGATAACACGTTCCTTGAGTTGTTTGATCTCATCTCCAATCTGATGGTTCTCCCACAGCTTCTTCATCTTGCGCACGCCCTTTTGCAGGAGATTAGCATTGGCATCACCACTGCTGTGGTTTTGCAAGAAGCGGTCGATGCAATCCTCGATGTCGTAGGATAGCTCACGCACCTTGTTCCTCCACTCCTTGGTCTGCACATCGATCTGGTCGTCGTCCATGTCTCCCAGCCTCTGCAGCACGGCGTTCATGCTTCCCAGCTCGTCTCTGAGCCAGCGGATGCCGCTCTTGACGCCCTTGAGATGGGTGTACTCGTCGGTGAGCAAGGAAGCCAGCTTGGCTATGACGGAGTTCATCGCCCCGGAGGAAGCGCTCACCGCCGCACCAGCCATCTCGAGCACGCGAGCTCCAGATCTGGAACGACGACGCTCACTGCTGCTGCCGCCGTGTGGGTGTGGACTGTGGAAGTGTGGAGTGGGGTTTGGTGGAGGACAGGAGGAGAGTGAAAGGTGGAAGAGATTCTCCGGCCGAAAGGCTCACGCGCTGGCGAC
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| CDS seq | ATGGCTGGTGCGGCGGTGAGCGCTTCCTCCGGGGCGATGAACTCCGTCATAGCCAAGCTGGCTTCCTTGCTCACCGACGAGTACACCCATCTCAAGGGCGTCAAGAGCGGCATCCGCTGGCTCAGAGACGAGCTGGGAAGCATGAACGCCGTGCTGCAGAGGCTGGGAGACATGGACGACGACCAGATCGATGTGCAGACCAAGGAGTGGAGGAACAAGGTGCGTGAGCTATCCTACGACATCGAGGATTGCATCGACCGCTTCTTGCAAAACCACAGCAGTGGTGATGCCAATGCTAATCTCCTGCAAAAGGGCGTGCGCAAGATGAAGAAGCTGTGGGAGAACCATCAGATTGGAGATGAGATCAAACAACTCAAGGAACGTGTTATCGAAGAGAAAGAGAGGCATGAACGGTATAAGATCGCGGATCGGCTCATGGTTGCACCCCAACATGTGCGCTTGGATCCTCGAGTACCAGCCTTGTATGAGCAAGCCAAAAACCTTGTGGGCATTGATAAGCCTCGGGAACAGATAATTGGCTGGATAAAGAGCGAAGAGAAGCAACTGAAGGTGGTGTCCATCTTTGGAACGGGAGGGTTGGGCAAGACTACTCTAGCTATGGAGGTGTATCACAAGATTGATGAATCATTTGATTGTCGGGCTATGGTCTCTGTATCTCGGACTCCTGATATCAAGAAGCTTCTTAGAGACATACTCTTTCAGATTAACGAGCGCGAGTATGAAAAGTCAAACGACTGGGAGATGGAACAACTTATACCGAAGTTGAGGAAGAACTTAGAAGACAAGAGGTACTTTTTCATCATTGATGATATCTGGAGCACAGATGCATGGAAACAATTGAAGTCAGCCTTGCCTGCCAATGACAACAAGAGTAGAATAATTACTACAACACGCATAAGAGATGTGGCAAAGTCATGTTGTTGCGACTTTGTGGGGCATATGTACGAAGCCATGCCTCAAAGTGAAGAGAACTCCTGCAAATTATTTTTTAGAAGAGTCTTTTCTAGCGAAGATTGCCCCAAACATTTGACGGAAGCAGCTAGTGTAATTTTGAAGAAATGTGGTGGCTTGCCATTAGCCATTATCAGTATAGCTGGGTTATTGTCCAATAAGAATCCGACAGTGGAAGTGTGGACCAAAATAAAGAACTCTATCTCTTCTATGGTTGAGAAAGATTCTCCTGTTGACAAAATGAAGAGGATATTGTTTCTCAGTTATTTTGATCTTCCTCAATATCTGAAGACGTGCTTGTTATATTTAAGTGTCTTTCCAGAGGATTCTAATATTGATCCTAGACGTTTGATACGGCTTTGGGTAGCTGAAGGATTAATTCTTGGACAGAGCAGAGCATGTACGGAGCAGTCGGGAGAAAGCTACTTGCATGAGCTTATAAACAGAAGCATGATACAACCGTCAAAGATTGGGGCAGATGGTAGAGTGAAAATCTGCAGAATACACGATGTCATACTCGACTTTATTGTGTCACAAGCTGAGGAGGAGAATTTTGTTACCATACTGAATAATAGTGACCCCAGTGACTATACTTCAAATAAGTTTCGCAGGTTATCCCTGCAAAGTGGCTTTTCTGAAGGCTCGAAGATGCCTAAAGCATCAAAGGACCTATCCCATCTCCGATCATTGCATATGTTTAAGCATGAAAGTTTGCCAGTAGTCCCTTCAGAATTTGCAAAATGTCAAGTCCTGCGTGTGCTGGCTATAAAACTTCGTCTGGGGGACAACTATATTAAACATGTTGGACATTTTTGTGAACTTAAGTACTTGAGAATCAAAGGAGGTATCCACAAGCTCCCAGAAGAGATTGGTAAGCTGCAGCATCTACAAACACTTGATCTGGCATATACTCGTATTGAAAAACTACCTGCAAGCATTGTCCAGCTACAGAAACTGGTGCACCTTCTCATCCCTTTTGGAGTGCCGCTGCCTGACGAAATAGGAAATCTGCAAGCTCTGGAGGTGTTGTCGGGTATTGATCTAGATAGAGCATCAGTAAAATCTATCTATGGGCTAGGTGAGCTGAGCAAACTGAGAGATGTTCGAATCTGGTGGTCAGATTCCAACGAAGATAACAGCAAGGAGGGCCACAGGACAGCATGCATCTCCTCTCTCTCCAAGCTTGTCAAGTGCAGCCTCCAATCATTGCGTCTTGCGCGGGGATTAAGCAACCCTGATGTCATAGCTTCATTGATGATTTCTTGTGGTTTCATTCCCCCTCTACGGAGACTTGTCTTTTACGATGAGTTCCCTACCATACCAAGCCAATTTGCATCGCTCGTCAACCTCACCCGCCTACGTGTAGAAGTTGGTGGAGTGGGAGGCCTTGAGATCCTTGCAAGTTTACCCATTCTGCAATCTCTTACCTTGGACACAAATTCTGACGTCTCCAACTTGAGGTGGGTCATCAGCGGCCAAGGCTTCCAGAATTTACGCAAGTTCAATTTTGAAATTCGGGATTCGGTAGTGGGGTTGATGTTTGAACCAGGAGCCATGCCAAAGCTCCAAAGGCTGAAACTCTGGTTGTATGCAAGGTGGCAGCTCGATGTCCATGGTGGTCCGGTTGTTGGGCTGCACCATCTTTCAGCCCTCAAGTCTATCGCTCTTGTATTCAACTGTAATGGTGCCGTTGCTGCCGAGGTGGAGTCTTCGGAGGATGACGCCAGGGCTGCAGCGGTTTCCCACCCCAACTGTCCCACTCTCGACATTCAAAGGTACAATGAACGCCGTATGAAAACAAGCCAGACGAATAGCAAACGTAGACTAATAACAAAACAAATTATAGATTCCGCTTGTAAACTGTGA
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| Protein seq | MAGAAVSASSGAMNSVIAKLASLLTDEYTHLKGVKSGIRWLRDELGSMNAVLQRLGDMDDDQIDVQTKEWRNKVRELSYDIEDCIDRFLQNHSSGDANANLLQKGVRKMKKLWENHQIGDEIKQLKERVIEEKERHERYKIADRLMVAPQHVRLDPRVPALYEQAKNLVGIDKPREQIIGWIKSEEKQLKVVSIFGTGGLGKTTLAMEVYHKIDESFDCRAMVSVSRTPDIKKLLRDILFQINEREYEKSNDWEMEQLIPKLRKNLEDKRYFFIIDDIWSTDAWKQLKSALPANDNKSRIITTTRIRDVAKSCCCDFVGHMYEAMPQSEENSCKLFFRRVFSSEDCPKHLTEAASVILKKCGGLPLAIISIAGLLSNKNPTVEVWTKIKNSISSMVEKDSPVDKMKRILFLSYFDLPQYLKTCLLYLSVFPEDSNIDPRRLIRLWVAEGLILGQSRACTEQSGESYLHELINRSMIQPSKIGADGRVKICRIHDVILDFIVSQAEEENFVTILNNSDPSDYTSNKFRRLSLQSGFSEGSKMPKASKDLSHLRSLHMFKHESLPVVPSEFAKCQVLRVLAIKLRLGDNYIKHVGHFCELKYLRIKGGIHKLPEEIGKLQHLQTLDLAYTRIEKLPASIVQLQKLVHLLIPFGVPLPDEIGNLQALEVLSGIDLDRASVKSIYGLGELSKLRDVRIWWSDSNEDNSKEGHRTACISSLSKLVKCSLQSLRLARGLSNPDVIASLMISCGFIPPLRRLVFYDEFPTIPSQFASLVNLTRLRVEVGGVGGLEILASLPILQSLTLDTNSDVSNLRWVISGQGFQNLRKFNFEIRDSVVGLMFEPGAMPKLQRLKLWLYARWQLDVHGGPVVGLHHLSALKSIALVFNCNGAVAAEVESSEDDARAAAVSHPNCPTLDIQRYNERRMKTSQTNSKRRLITKQIIDSACKL |
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| Function | Disease resistance protein RGA5 [UniProtKB/Swiss-Prot:Q2R8L1] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os02g17304 | LOC_Os02g17304.1 | Chr02 | 9922465 | 9928349 | - | MSU_osa1r7 | ||
| CDS seq | ATGGCTGGTGCGGCGGTGAGCGCTTCCTCCGGGGCGATGAACTCCGTCATAGCCAAGCTGGCTTCCTTGCTCACCGACGAGTACACCCATCTCAAGGGCGTCAAGAGCGGCATCCGCTGGCTCAGAGACGAGCTGGGAAGCATGAACGCCGTGCTGCAGAGGCTGGGAGACATGGACGACGACCAGATCGATGTGCAGACCAAGGAGTGGAGGAACAAGGTGCGTGAGCTATCCTACGACATCGAGGATTGCATCGACCGCTTCTTGCAAAACCACAGCAGTGGTGATGCCAATGCTAATCTCCTGCAAAAGGGCGTGCGCAAGATGAAGAAGCTGTGGGAGAACCATCAGATTGGAGATGAGATCAAACAACTCAAGGAACGTGTTATCGAAGAGAAAGAGAGGCATGAACGGTATAAGATCGCGGATCGGCTCATGGTTGCACCCCAACATGTGCGCTTGGATCCTCGAGTACCAGCCTTGTATGAGCAAGCCAAAAACCTTGTGGGCATTGATAAGCCTCGGGAACAGATAATTGGCTGGATAAAGAGCGAAGAGAAGCAACTGAAGGTGGTGTCCATCTTTGGAACGGGAGGGTTGGGCAAGACTACTCTAGCTATGGAGGTGTATCACAAGATTGATGAATCATTTGATTGTCGGGCTATGGTCTCTGTATCTCGGACTCCTGATATCAAGAAGCTTCTTAGAGACATACTCTTTCAGATTAACGAGCGCGAGTATGAAAAGTCAAACGACTGGGAGATGGAACAACTTATACCGAAGTTGAGGAAGAACTTAGAAGACAAGAGGTACTTTTTCATCATTGATGATATCTGGAGCACAGATGCATGGAAACAATTGAAGTCAGCCTTGCCTGCCAATGACAACAAGAGTAGAATAATTACTACAACACGCATAAGAGATGTGGCAAAGTCATGTTGTTGCGACTTTGTGGGGCATATGTACGAAGCCATGCCTCAAAGTGAAGAGAACTCCTGCAAATTATTTTTTAGAAGAGTCTTTTCTAGCGAAGATTGCCCCAAACATTTGACGGAAGCAGCTAGTGTAATTTTGAAGAAATGTGGTGGCTTGCCATTAGCCATTATCAGTATAGCTGGGTTATTGTCCAATAAGAATCCGACAGTGGAAGTGTGGACCAAAATAAAGAACTCTATCTCTTCTATGGTTGAGAAAGATTCTCCTGTTGACAAAATGAAGAGGATATTGTTTCTCAGTTATTTTGATCTTCCTCAATATCTGAAGACGTGCTTGTTATATTTAAGTGTCTTTCCAGAGGATTCTAATATTGATCCTAGACGTTTGATACGGCTTTGGGTAGCTGAAGGATTAATTCTTGGACAGAGCAGAGCATGTACGGAGCAGTCGGGAGAAAGCTACTTGCATGAGCTTATAAACAGAAGCATGATACAACCGTCAAAGATTGGGGCAGATGGTAGAGTGAAAATCTGCAGAATACACGATGTCATACTCGACTTTATTGTGTCACAAGCTGAGGAGGAGAATTTTGTTACCATACTGAATAATAGTGACCCCAGTGACTATACTTCAAATAAGTTTCGCAGGTTATCCCTGCAAAGTGGCTTTTCTGAAGGCTCGAAGATGCCTAAAGCATCAAAGGACCTATCCCATCTCCGATCATTGCATATGTTTAAGCATGAAAGTTTGCCAGTAGTCCCTTCAGAATTTGCAAAATGTCAAGTCCTGCGTGTGCTGGCTATAAAACTTCGTCTGGGGGACAACTATATTAAACATGTTGGACATTTTTGTGAACTTAAGTACTTGAGAATCAAAGGAGGTATCCACAAGCTCCCAGAAGAGATTGGTAAGCTGCAGCATCTACAAACACTTGATCTGGCATATACTCGTATTGAAAAACTACCTGCAAGCATTGTCCAGCTACAGAAACTGGTGCACCTTCTCATCCCTTTTGGAGTGCCGCTGCCTGACGAAATAGGAAATCTGCAAGCTCTGGAGGTGTTGTCGGGTATTGATCTAGATAGAGCATCAGTAAAATCTATCTATGGGCTAGGTGAGCTGAGCAAACTGAGAGATGTTCGAATCTGGTGGTCAGATTCCAACGAAGATAACAGCAAGGAGGGCCACAGGACAGCATGCATCTCCTCTCTCTCCAAGCTTGTCAAGTGCAGCCTCCAATCATTGCGTCTTGCGCGGGGATTAAGCAACCCTGATGTCATAGCTTCATTGATGATTTCTTGTGGTTTCATTCCCCCTCTACGGAGACTTGTCTTTTACGATGAGTTCCCTACCATACCAAGCCAATTTGCATCGCTCGTCAACCTCACCCGCCTACGTGTAGAAGTTGGTGGAGTGGGAGGCCTTGAGATCCTTGCAAGTTTACCCATTCTGCAATCTCTTACCTTGGACACAAATTCTGACGTCTCCAACTTGAGGTGGGTCATCAGCGGCCAAGGCTTCCAGAATTTACGCAAGTTCAATTTTGAAATTCGGGATTCGGTAGTGGGGTTGATGTTTGAACCAGGAGCCATGCCAAAGCTCCAAAGGCTGAAACTCTGGTTGTATGCAAGGTGGCAGCTCGATGTCCATGGTGGTCCGGTTGTTGGGCTGCACCATCTTTCAGCCCTCAAGTCTATCGCTCTTGTATTCAACTGTAATGGTGCCGTTGCTGCCGAGGTGGAGTCTTCGGAGGATGACGCCAGGGCTGCAGCGGTTTCCCACCCCAACTGTCCCACTCTCGACATTCAAAGGTACAATGAACGCCGTATGAAAACAAGCCAGACGAATAGCAAACGTAGACTAATAACAAAACAAATTATAGATTCCGCTTGTAAACTGTGA
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| Protein seq | MAGAAVSASSGAMNSVIAKLASLLTDEYTHLKGVKSGIRWLRDELGSMNAVLQRLGDMDDDQIDVQTKEWRNKVRELSYDIEDCIDRFLQNHSSGDANANLLQKGVRKMKKLWENHQIGDEIKQLKERVIEEKERHERYKIADRLMVAPQHVRLDPRVPALYEQAKNLVGIDKPREQIIGWIKSEEKQLKVVSIFGTGGLGKTTLAMEVYHKIDESFDCRAMVSVSRTPDIKKLLRDILFQINEREYEKSNDWEMEQLIPKLRKNLEDKRYFFIIDDIWSTDAWKQLKSALPANDNKSRIITTTRIRDVAKSCCCDFVGHMYEAMPQSEENSCKLFFRRVFSSEDCPKHLTEAASVILKKCGGLPLAIISIAGLLSNKNPTVEVWTKIKNSISSMVEKDSPVDKMKRILFLSYFDLPQYLKTCLLYLSVFPEDSNIDPRRLIRLWVAEGLILGQSRACTEQSGESYLHELINRSMIQPSKIGADGRVKICRIHDVILDFIVSQAEEENFVTILNNSDPSDYTSNKFRRLSLQSGFSEGSKMPKASKDLSHLRSLHMFKHESLPVVPSEFAKCQVLRVLAIKLRLGDNYIKHVGHFCELKYLRIKGGIHKLPEEIGKLQHLQTLDLAYTRIEKLPASIVQLQKLVHLLIPFGVPLPDEIGNLQALEVLSGIDLDRASVKSIYGLGELSKLRDVRIWWSDSNEDNSKEGHRTACISSLSKLVKCSLQSLRLARGLSNPDVIASLMISCGFIPPLRRLVFYDEFPTIPSQFASLVNLTRLRVEVGGVGGLEILASLPILQSLTLDTNSDVSNLRWVISGQGFQNLRKFNFEIRDSVVGLMFEPGAMPKLQRLKLWLYARWQLDVHGGPVVGLHHLSALKSIALVFNCNGAVAAEVESSEDDARAAAVSHPNCPTLDIQRYNERRMKTSQTNSKRRLITKQIIDSACKL
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.439862 | 0.602538 | 0.578990 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0272900 | RBH | 0.799756 | 1.107829 | 2.541261 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os09g13820 | SBH | 0.0 | 0.0 | 0.163490 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0272900 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0011970 | RBH | 0.253469 | 11.120879 | 5.299795 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0012100 | RBH | 0.128025 | 1.428168 | 2.123747 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0011970 | RBH | 1.043179 | 6.088431 | 5.672606 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0011800 | RBH | 0.047432 | 0.234553 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0011750 | RBH | 14.045711 | 0.0 | 9.572927 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0156100 | RBH | 6.328355 | 17.317972 | 40.4981365 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0011600 | RBH | 0.211715 | 3.246898 | 4.215747 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0166900 | RBH | 1.796898 | 6.7093065 | 4.7702595 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0012150 | RBH | 0.379086 | 0.122311 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0011720 | RBH | 0.140200 | 9.120483 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0012110 | RBH | 2.521506 | 35.965263 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0012020 | RBH | 2.377369 | 0.343060 | 1.430604 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0011740 | RBH | 0.322770 | 6.930710 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G012070 | SBH | 0.093228 | 21.307161 | 11.846311 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0011890 | RBH | 0.631141 | 7.849659 | 2.948246 |
