Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os02g06330 | OGI:02009790 | 16/16 | Nipponbare | IRGSP 1.0 | MSU | Chr02:3164423-3165034 | ||||||||
| Gene Symbol | ERF132, OsERF#132, OsERF132, AP2/EREBP#010, AP2/EREBP10, DLN41, OsDLN41 | ||||||||||
| DNA seq | CTAGAGGTGGAGCAGCGTGTCGCAGCGCCAATCCATCTCGTCGGCTTCGGCGGCGGCGGCGGCGGATGGGGACGAGGCCGGCAGGTTCAGATCGAACGGCAGCGGCGAGCAGCGCGGGGCGGCGGCCTCGTCGCCGGCGCCCGAGGCGCCGTCCTCGCAGAGCACGGAGGAAGAGGAGCCGCAGTAGCTGCGGCAGTCCTCGTCGGCGGCGGGGTTGCTGCCGCCGTTGCGCGGCGGCGGCAGCCCGAGAGCTCCGGCGGAGGCGGCCGCGGCGGCGACCGTGACGCCCCACGACTCGACCGTGCTGCTGTGGCTAGACGTCGCCGCCGCCGCCGCGGGAGGGAGATGCTGCGGCGGCTGATGCTGCGGCGGCGGAGGCGGAGGCGCGGAGGAGGAGGTGGAGGGGGGGAAGTTGGTGCGCGCGGCGGCGCCGCGGAGCGACCTCGCGGCGGCGTCGTAGGCGCGGGCGGCGGCCTCTGCGGAGTCGAACGTGCCGAGCCAGATCGGGGTCTTCTTCGCCGGGTCCCGGATCTCGGCCGCGTACCTCCCCGACGGCCGCCTCCTCACCCCACGGTACCTCACCTCCCCTTCCCCCACCCCCACCCCCGCCAT
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| CDS seq | ATGGCGGGGGTGGGGGTGGGGGAAGGGGAGGTGAGGTACCGTGGGGTGAGGAGGCGGCCGTCGGGGAGGTACGCGGCCGAGATCCGGGACCCGGCGAAGAAGACCCCGATCTGGCTCGGCACGTTCGACTCCGCAGAGGCCGCCGCCCGCGCCTACGACGCCGCCGCGAGGTCGCTCCGCGGCGCCGCCGCGCGCACCAACTTCCCCCCCTCCACCTCCTCCTCCGCGCCTCCGCCTCCGCCGCCGCAGCATCAGCCGCCGCAGCATCTCCCTCCCGCGGCGGCGGCGGCGACGTCTAGCCACAGCAGCACGGTCGAGTCGTGGGGCGTCACGGTCGCCGCCGCGGCCGCCTCCGCCGGAGCTCTCGGGCTGCCGCCGCCGCGCAACGGCGGCAGCAACCCCGCCGCCGACGAGGACTGCCGCAGCTACTGCGGCTCCTCTTCCTCCGTGCTCTGCGAGGACGGCGCCTCGGGCGCCGGCGACGAGGCCGCCGCCCCGCGCTGCTCGCCGCTGCCGTTCGATCTGAACCTGCCGGCCTCGTCCCCATCCGCCGCCGCCGCCGCCGAAGCCGACGAGATGGATTGGCGCTGCGACACGCTGCTCCACCTCTAG
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| Protein seq | MAGVGVGEGEVRYRGVRRRPSGRYAAEIRDPAKKTPIWLGTFDSAEAAARAYDAAARSLRGAAARTNFPPSTSSSAPPPPPPQHQPPQHLPPAAAAATSSHSSTVESWGVTVAAAAASAGALGLPPPRNGGSNPAADEDCRSYCGSSSSVLCEDGASGAGDEAAAPRCSPLPFDLNLPASSPSAAAAAEADEMDWRCDTLLHL |
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| Function | Ethylene-responsive transcription factor 4 [UniProtKB/Swiss-Prot:O80340] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os02g06330 | LOC_Os02g06330.1 | Chr02 | 3164423 | 3165034 | - | MSU_osa1r7 | ||
| CDS seq | ATGGCGGGGGTGGGGGTGGGGGAAGGGGAGGTGAGGTACCGTGGGGTGAGGAGGCGGCCGTCGGGGAGGTACGCGGCCGAGATCCGGGACCCGGCGAAGAAGACCCCGATCTGGCTCGGCACGTTCGACTCCGCAGAGGCCGCCGCCCGCGCCTACGACGCCGCCGCGAGGTCGCTCCGCGGCGCCGCCGCGCGCACCAACTTCCCCCCCTCCACCTCCTCCTCCGCGCCTCCGCCTCCGCCGCCGCAGCATCAGCCGCCGCAGCATCTCCCTCCCGCGGCGGCGGCGGCGACGTCTAGCCACAGCAGCACGGTCGAGTCGTGGGGCGTCACGGTCGCCGCCGCGGCCGCCTCCGCCGGAGCTCTCGGGCTGCCGCCGCCGCGCAACGGCGGCAGCAACCCCGCCGCCGACGAGGACTGCCGCAGCTACTGCGGCTCCTCTTCCTCCGTGCTCTGCGAGGACGGCGCCTCGGGCGCCGGCGACGAGGCCGCCGCCCCGCGCTGCTCGCCGCTGCCGTTCGATCTGAACCTGCCGGCCTCGTCCCCATCCGCCGCCGCCGCCGCCGAAGCCGACGAGATGGATTGGCGCTGCGACACGCTGCTCCACCTCTAG
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| Protein seq | MAGVGVGEGEVRYRGVRRRPSGRYAAEIRDPAKKTPIWLGTFDSAEAAARAYDAAARSLRGAAARTNFPPSTSSSAPPPPPPQHQPPQHLPPAAAAATSSHSSTVESWGVTVAAAAASAGALGLPPPRNGGSNPAADEDCRSYCGSSSSVLCEDGASGAGDEAAAPRCSPLPFDLNLPASSPSAAAAAEADEMDWRCDTLLHL
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.191165 | 0.275161 | 0.132975 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0202000 | SBH | 0.000000 | 0.000000 | 0.000000 |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0202000 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0004450 | RBH | 0.0 | 2.842510 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0004650 | RBH | 0.094679 | 1.689132 | 0.484440 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0004470 | RBH | 0.0 | 0.297581 | 0.299115 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0004380 | RBH | 0.079445 | 0.119917 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0004420 | RBH | 0.0 | 10.043994 | 7.741706 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0053700 | RBH | 4.732176 | 17.2686015 | 11.5627805 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0004400 | RBH | 0.000000 | 0.0 | 0.190445 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0056400 | RBH | 7.3168125 | 10.11751 | 8.08618 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0004810 | RBH | 0.104914 | 0.167588 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0004360 | RBH | 0.282338 | 2.209659 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0004670 | RBH | 3.652295 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0004610 | RBH | 1.035089 | 0.728164 | 0.092602 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0004400 | RBH | 0.0 | 3.416195 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G004440 | RBH | 0.186894 | 0.754453 | 1.022980 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0004390 | RBH | 0.0 | 6.856985 | 3.347437 |
