Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
LOC_Os01g73190 OGI:01124630 | 4/16 Nipponbare | IRGSP 1.0 | MSU Chr01:42436589-42437820
Gene Symbol prx21
DNA seq

ATGGCGAGAAAAATGAGCAGCACGTTGCAGGTTTTGGTCGTTTCCTGCTGCAGCTTGCTGCTTCTGTGTGCTCCGGCGGCCTCCGCCGGCGATTACCCGCCGACGGCGAAGGGCTTGTCGTACGGTTTCTACCAGAGGAGCTGTCCCAAGGCGGAGACCATCGTGAGGAGCTTCCTCAAGAAGGCCATCCGCAACGACGTCGGCCTCGCCCCCGGCCTCATCCGTCTCCACTTCCATGACTGCTTCGTCCAGGCAATTAACTAATTGATTAAAATTAATTGATTATACACCTAATCATGCATAATGCATGTGCAAAATGATGAAATTACGCCTCAAACATGCTCTGAATTTTGAATTCTGGATTGAACAGATCGATCGATACTATATTTAAACACGCATCTGTGACGGGTAATTATTCGCGAACCGCCACTAATAATTGTGCTGCGCTGTGCGTGCAGGGTTGCGACGCGTCGGTGCTGTTGGCGCGCACGGCGACGGAGGCGAGCGAGCTGGACGCTCCACCCAACGAGACCATCCGCCCGTCGGCGTTGATGGCCGTCGCCCAACTCCGCGCCCTGCTCGACGACGCGTGCAGCGGGGCCGTCGTCTCCTGCGCTGACATCCTCACCCTCGCCGCGCGCGACTCCGTCCGCCTGGTCGGCGGGCCGGAGTACAGGGTCCCCCTGGGCCGGCGCGACGGCGCGACGATCGCGGCGAGGGAGCGCGTCGTCGCCGCGTTCCCGCCGCCGAGCTCCAACGTGACGGCGCTCCTCGCCGCCGTGGCCAAGATCGGCCTCGACGCCGCCGACCTCGTGGCGCTCTCCGGCGCGCACACGCTCGGCGTCTCCCGCTGCATCTCCTTCGACGACCGCCTCTTCCCGCAGGTGGACGCCACCATGGACGCGCGGTTCGCCGCCCACCTCAGGCTCTCCTGCCCGGCCAAGAACACCACCAACACCACCGCCATCGACGTACGGACGCCCAACGCCTTCGACAACAAGTACTACGTCGACCTGCTCAGCCGGCAGGGGCTCCTGACCTCCGATCAGGTGCTGTTCAGCGACGGCAGGACGAGGGGCCTCGTCGGCAGGTTCGCCGTCGACCAGCCGGAGTTCTTCCGCCGCTTCGCCTTCTCCATGGTGAAGATGTCGCAGATCCAGGTGATGACGGGAGTGCAGGGGGAGATCCGCACCAACTGCTCGGTGCGCAACGCCGCCGGCGGTGGCACCTAG

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CDS seq

ATGGCGAGAAAAATGAGCAGCACGTTGCAGGTTTTGGTCGTTTCCTGCTGCAGCTTGCTGCTTCTGTGTGCTCCGGCGGCCTCCGCCGGCGATTACCCGCCGACGGCGAAGGGCTTGTCGTACGGTTTCTACCAGAGGAGCTGTCCCAAGGCGGAGACCATCGGTTGCGACGCGTCGGTGCTGTTGGCGCGCACGGCGACGGAGGCGAGCGAGCTGGACGCTCCACCCAACGAGACCATCCGCCCGTCGGCGTTGATGGCCGTCGCCCAACTCCGCGCCCTGCTCGACGACGCGTGCAGCGGGGCCGTCGTCTCCTGCGCTGACATCCTCACCCTCGCCGCGCGCGACTCCGTCCGCCTGGTCGGCGGGCCGGAGTACAGGGTCCCCCTGGGCCGGCGCGACGGCGCGACGATCGCGGCGAGGGAGCGCGTCGTCGCCGCGTTCCCGCCGCCGAGCTCCAACGTGACGGCGCTCCTCGCCGCCGTGGCCAAGATCGGCCTCGACGCCGCCGACCTCGTGGCGCTCTCCGGCGCGCACACGCTCGGCGTCTCCCGCTGCATCTCCTTCGACGACCGCCTCTTCCCGCAGGTGGACGCCACCATGGACGCGCGGTTCGCCGCCCACCTCAGGCTCTCCTGCCCGGCCAAGAACACCACCAACACCACCGCCATCGACGTACGGACGCCCAACGCCTTCGACAACAAGTACTACGTCGACCTGCTCAGCCGGCAGGGGCTCCTGACCTCCGATCAGGTGCTGTTCAGCGACGGCAGGACGAGGGGCCTCGTCGGCAGGTTCGCCGTCGACCAGCCGGAGTTCTTCCGCCGCTTCGCCTTCTCCATGGTGAAGATGTCGCAGATCCAGGTGATGACGGGAGTGCAGGGGGAGATCCGCACCAACTGCTCGGTGCGCAACGCCGCCGGCGGTGGCACCTAG

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Protein seq

MARKMSSTLQVLVVSCCSLLLLCAPAASAGDYPPTAKGLSYGFYQRSCPKAETIGCDASVLLARTATEASELDAPPNETIRPSALMAVAQLRALLDDACSGAVVSCADILTLAARDSVRLVGGPEYRVPLGRRDGATIAARERVVAAFPPPSSNVTALLAAVAKIGLDAADLVALSGAHTLGVSRCISFDDRLFPQVDATMDARFAAHLRLSCPAKNTTNTTAIDVRTPNAFDNKYYVDLLSRQGLLTSDQVLFSDGRTRGLVGRFAVDQPEFFRRFAFSMVKMSQIQVMTGVQGEIRTNCSVRNAAGGGT

Function Cationic peroxidase SPC4 [UniProtKB/Swiss-Prot:P84516]

Transcripts

Gene Transcript Chromosome Start End Strand Source
LOC_Os01g73190 LOC_Os01g73190.1 Chr01 42436589 42437820 + MSU_osa1r7
CDS seq

ATGGCGAGAAAAATGAGCAGCACGTTGCAGGTTTTGGTCGTTTCCTGCTGCAGCTTGCTGCTTCTGTGTGCTCCGGCGGCCTCCGCCGGCGATTACCCGCCGACGGCGAAGGGCTTGTCGTACGGTTTCTACCAGAGGAGCTGTCCCAAGGCGGAGACCATCGGTTGCGACGCGTCGGTGCTGTTGGCGCGCACGGCGACGGAGGCGAGCGAGCTGGACGCTCCACCCAACGAGACCATCCGCCCGTCGGCGTTGATGGCCGTCGCCCAACTCCGCGCCCTGCTCGACGACGCGTGCAGCGGGGCCGTCGTCTCCTGCGCTGACATCCTCACCCTCGCCGCGCGCGACTCCGTCCGCCTGGTCGGCGGGCCGGAGTACAGGGTCCCCCTGGGCCGGCGCGACGGCGCGACGATCGCGGCGAGGGAGCGCGTCGTCGCCGCGTTCCCGCCGCCGAGCTCCAACGTGACGGCGCTCCTCGCCGCCGTGGCCAAGATCGGCCTCGACGCCGCCGACCTCGTGGCGCTCTCCGGCGCGCACACGCTCGGCGTCTCCCGCTGCATCTCCTTCGACGACCGCCTCTTCCCGCAGGTGGACGCCACCATGGACGCGCGGTTCGCCGCCCACCTCAGGCTCTCCTGCCCGGCCAAGAACACCACCAACACCACCGCCATCGACGTACGGACGCCCAACGCCTTCGACAACAAGTACTACGTCGACCTGCTCAGCCGGCAGGGGCTCCTGACCTCCGATCAGGTGCTGTTCAGCGACGGCAGGACGAGGGGCCTCGTCGGCAGGTTCGCCGTCGACCAGCCGGAGTTCTTCCGCCGCTTCGCCTTCTCCATGGTGAAGATGTCGCAGATCCAGGTGATGACGGGAGTGCAGGGGGAGATCCGCACCAACTGCTCGGTGCGCAACGCCGCCGGCGGTGGCACCTAG

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Protein seq

MARKMSSTLQVLVVSCCSLLLLCAPAASAGDYPPTAKGLSYGFYQRSCPKAETIGCDASVLLARTATEASELDAPPNETIRPSALMAVAQLRALLDDACSGAVVSCADILTLAARDSVRLVGGPEYRVPLGRRDGATIAARERVVAAFPPPSSNVTALLAAVAKIGLDAADLVALSGAHTLGVSRCISFDDRLFPQVDATMDARFAAHLRLSCPAKNTTNTTAIDVRTPNAFDNKYYVDLLSRQGLLTSDQVLFSDGRTRGLVGRFAVDQPEFFRRFAFSMVKMSQIQVMTGVQGEIRTNCSVRNAAGGGT

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.0 0.0 0.0

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_01g0962900 RBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | MSU NA NA NA NA NA
Nipponbare | IRGSP 1.0 | RAP-db Os01g0962900 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_01g0047940 SBH 1.168258 177.305801 5.683673
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_01g0047450 SBH 0.0 0.0 0.444657
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_01g0047940 SBH 0.0 0.0 0.000000
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_01g0047350 SBH 0.000000 0.0 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_01g0046940 SBH 6.914035 1.419405 15.293225
Minghui 63 | MH63RS3 | HZAU OsMH63_01G0697700 RBH 0 0 0
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_01g0046400 SBH 0.390010 4.553105 0.802642
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_01G0697400 RBH 0 0 0
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_01g0046990 SBH 0.099767 0.0 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_01g0046860 RBH 0.0 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_01g0047150 SBH 0.0 11.210967 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_01g0047140 SBH 0.315611 0.000000 0.157462
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_01g0046900 SBH 0.077370 0.0 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_01G047210 SBH 0.0 0.000000 0.0
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_01g0046960 SBH 0.0 0.0 0.0
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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