Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os01g60060 | OGI:01104030 | 16/16 | Nipponbare | IRGSP 1.0 | MSU | Chr01:34738321-34744027 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | GGATCAAAACCCAGAAGGTGTTCCCAGATAAGGCTCCATAGATAAAACAGGCAAGAAGTAACTGCAAGTAAACGGTTTATTAAATCATTTCACATTTTGATCAGCAACTGAGCTCTTCAGAGGTTTCTTTTAATTAAGCCTCCCACTACAACGCATACATGCATTTTCTATGTGCATGTTGCTTGGACCTGGTAAGCATTCTCATAGGCAATGTTTGATAAGAATTCCCTTGAATCAAGTTATATAAGGTTGTCTTGTTTGATTAGCTATTTTCTTTGCCTGGTTGCCAGCCTCAAGGAGGGAGACGCCATTTGGCATCTACTCGAGCTTGTTCACTGCACAGTGCTCTTCGACAAGAACAATCAGCAGATTTTGCTATCCTCCGGTGTGAATTTGATTTGCGTGGAGGGTGACACCGTGTGGTACGATGGTGGAGATGCAGTGGCTGCTACTTCTGTTCATGCTCTTGGTGAGCCTACGGCTAAGCTTCAGTCAGACAAATCCTCAAGATGGTAAGTCTTTGATCTTTCTGCTTTTCAATAGGTTACAGGAAGAAAGGTGACATCTTTTCCAGGATTTGTCACTCAGACTGGCCATTGACCTGAAAACAAGGTGAGTAGGATTAGGTCTGCCAGAAGTACAGCAAGAGAAGAATCTATTTGTGGAGCATGAATGACTAGATGCTACAGAAAAACAAAATCCTTAAAGATAGCCTTCTGCCATCAATACTATGTTCTCCTTGGGTAGTTATGCAACAAATTGTGATCATTTGGTTATTTCCATCTAATAACCTAGGAAGATTTTTTTTATGACCAAATTCATAGTGTCATGTACAAAGAATAGTTTCCCATGATGAAAAGGGGAGCTGCAACAGCTATATCTCATGCACGCACGATCAATAATTTTAGAGAGATGACTCCTTCCTTTCCTGCAGGAGCGAATCCATGAAAAAGCCATGTGATGCACAGGACAGGCGGAACTTTTGAATCCCATTAATTTTAGCTAATGTTAGAATGTAAACATAGTATTATATCCATGATTCATACAGGACACCTGGTAATTTTTGTTTTTAGATTCGCCCCTGCTTTCCTGGACCATACTTTCCTGTGAAATTTTCCATGATGATGATAAACTAATGGATGATATTGACCTAATAGGCCAAGATGACTTGGATCAACCACTGGAGTTGTTGACACATTTTGCTTGACTAACATTTGTTCCATTTATTCTACAGTTTCTGCACTCCAGGCATTGATGAAGAATTGGCAGAATGAACCGCAAAGCTGGATGGGATCGACTGATCCCTGCACCTCCTGGGATGGAATTTCCTGTTCCAATGGGAGGGTGACAGAAATGTGAGTGATCAACTTCGATTCATCATATTTGTACTTATTTTTGAGACAAGAACTACACCGAAACCTGGTATTTACAGGAGATTATCAGGCATTAATCTGCAAGGCACATTAAGCAATGCAATAGACCAACTTTCTTCTTTGACATATCTGTAAGTCCCTGCTTACTGAGTTTTGAACAAACTACCACACTGCAAAATGCTTTATGCTCCTGATGTAAAATAAACTACATCCAGGGATCTGTCTAACAACCTAAATCTTGGAGGTCCACTTCCTCCAAGCATTGTGAATCTGAAGCAGCTCACAACTCTGTAAGAACAGCATGTCACTATAAGAAAACATTTCTTCCTTTTTGGTCTGTGGAGAGGACTAAGAAAAATAGGGGAAAACACTGATTTATATCTTGGTTTTGTCAGGATTTTACTTGGATGCAGTTTCACTGGTGATATTCCAGAGCAGATCGGAGCATTAAGGCAACTCACATTCCTGTAAGAAACAACTCAAACGTGGGCAGATATATTGAATGGACATCAATCTCTTCACGATATGATTTACTTTAGCCTAAGAAATGCTCTCATGCAGGGCCCTGAACTCAAATAAGTTCACTGGTGGAATCCCCCCAACACTTGGCCTTCTCTCTAAGCTTTTTTGGTTGGACTTGTCAGACAATCAGCTGTCGGGGAAAATACCGGTTTCATCAGGTTCAAACCCAGGGCTGGATCAGCTTGTTAATGCAGAACATTTGTAAGTTCTCAAATGGTGTACCAGTTCTAGAACAAAAGAATCAAGATATACTGCTGCTTAAATGTATGGTATCCTCATATGACTCATACATTTCCAATCAACAGCCATTTCAGTGAGAACCAGTTGACAGGCCCAATTGACGAAAAGCTTTTCAGTGAAAAAATGAACCTTATACACGTGTAAGCTGCACACTGTTTGTTTGTGCTTGGTAGTATCATCTTGCCATCACCTCACTGCCTTCAGTAATAATTGTCAGGATATTTGACAACAATAACTTTACTGGACCAATCCCAGGATCTCTCGGGAGAGTCTCATCAATTCAAATTATGTAAGTACCTCGTAATATGATTTACCCTATGTTTTGACCCCCTTTGAACAGTTTCATGTTTTTTTTTTCCTGCCTATTGCAACAGCCGACTAGATCATAACCAATTCAGTGGTCCAGTTCCAGGAAGTATAGCAAACCTATCTCGTCTGATGGAACTGTAAGTGATTACCATCAAGGAACATCAACAAATATTTCTTATTCCTGGAAACAACATTGCAAATATTTGTTTTTGTTTTTGCAGGAGCTTAGCAAGCAACCAACTGAATGGGACAGTGCCAGACCTCACCAGTGCAAATGCTCTCACTTATGTGTAAGGAAGAAAGTATATGAGCATTTAAGGTTAATGATTCTTTGAGTTATGGGAAATTTTCTTCCTTTTTACAGGGACCTAAGCAACAATAACTTCATGAGCTCACCAGCACCGCGATGGTTTTCAACATTAACATCCTTGACTACCTTGTGAGTTGTCTGATGACGAAAAAACAGTGAGTATCAAATGGACTTAGTAAGATACATCACAATTAATGTTTCTATTCCTGTTGACAACTTACAGATTTATGGATAGTGATCATCTTACTGGAACAATCCCCAGTGCCCTGTTCAGTTTCCCGCAATTGCAGCAAATGTAATTTCCTCATGGATCATGCTACAGCTCTCTGATAGCATCTCTAGCTAAAAGTTTAACTTCAGTGAACTTATGCCTTCTGATGTTATAAATTGGAATGCAGATCATTAGCTAAGAATTCATTCAGTGGGGAACTTAATATGAGCAGTAACATCAGTTCACTACTGCGGGTTGTTAATTTGACAAACAATCAGATCTTCAATGCTGAAGTTGACCCAAGCTACACCGGCAGCCTCATGTAAGCATCATCCTGTACTGTATAAGGGTGTACAAGTGAGTGCATGCATTCTCACCCAACGTATTCTTTCCTTGTCCAGACTATCAGGCAATCTTATATGCTTCAACAATATCAGTTTCTGCACACTCAAGCAAAAGCAGCAAGTGCCATACTCAACAAACCTAGGTCCATGTGGTGCCATTTCATGCCCCACTGACCAGTCAGCAAATCCGGTGGCTTCACAGAACTGTGCTTGCGCCAGCCCCTTCCAGGGTTTGATGATCTTCCGAGCACCAGCCTTCTCTGATGTGACCAATCCCAAGTCATTCCAACCTTTGGAATTTACTCTTGTTCAGAACCTTAGCCTAGCTCCAGGATCAGTTGCCATTTCCAATGTTGAGTTCAGTCCAGGGGAGCCACTAACATTCACAGTGAAGGTTTTTCCAGAGAGCGGAACAAGCTTCAATCACTCAGAGGTTATCAGAATCAGTTCTTCTTTGGTCAACCAAACCTACAAAGCTCCAGCATATTTTGGACCATATAGCTTCATAGCAAGCACATATTTTGCAAGTATGGCGTTGCTTAGGTCTGCAATTTCTTTAGTTTGCTTTATTTTCAAACATTACATAACTCATTCATTTCAGGCCCCAGTGGTAAAAGGTCGTCAATGGGCAAAGGTGCAATAATCGGAATAGCGGTTGCTGGTTTTCTCCTTCTTGTTGGCCTTATCCTAGTAGCAATGTATGCTCTAAGGCAGAAAAAAATAGCTAAGGAGGCAGTAGAACGAACTACTAATCCTTTTGGTAATGTGTTATTTCATCATTCAGTATCCATCCAATAGGGAAGTGTTAAGCATGATTGCTAATCTGTGCTAGTGAATGCTCTGGTGCCACAGCATCATGGGGACAAGGTGGTAAAGATAATGGAGATGTGCCACAGCTGAAGGGAGCAAGATACTTTGCATTTGAGGAACTGAAGAGGTGCACAAACAATTTCTCAGAAACCCAAGAAATAGGATCAGGAGGATATGGGAAGGTATATTGGTGAATGAATTTCCATGCTAGTATAGTCACAAAAAGAAATAAGGATTTCCAAAAGCAATTAATCTATTATCTTTTCTGTTAAAAGGTGTACAAAGGAATGCTCGCAAATGGGCAAATGGCTGCAATAAAACGCGCACAGCAAGGATCTATGCAAGGTGCAGCTGAATTTAAGAATGAGATAGAACTACTTTCCAGGGTTCATCACAAGAACCTGGTGAGCTTAGTAGGTTTCTGCTATGAACAAGGGGAGCAGATGTTGGTTTATGAGTACATTCCTAATGGGACCTTAAGGGAGAATCTGAAGGGTATACTTTTCAAACTTCATCACCACTACTACCCCCATTTATAACCTATTTACATAATTAATACATGCTACAACAAAAGGACATGGGGGTTCATCCACATCTTAACTGCAGGTAAAGGAGGAATGCACTTGGATTGGAAGAAACGCCTTCAAATTGCAGTTGGCTCTGCTAAAGGTCTAGCGTATCTTCATGAACTTGCTGATCCACCAATTATCCATAGAGATATCAAATCAACCAATATCCTTCTGGATGAAAGTCTAAATGCAAAGGTTGCTGATTTTGGTCTTTCAAAGCTGGTATCTGACACAAAAAAGGGCCATGTTTCTACCCAAGTGAAGGGCACACTGGTATGTACTTCTGGAACTTCAAAATGCATAACTTTTATTGACAAAAAAATATTTCTAGTTGATTACTCTTCTGTGTTGATATCTAGGGTTATTTGGATCCTGAATACTACATGACTCAGCAGCTATCTGAGAAGAGTGATGTATATAGCTTTGGAGTTGTCATGCTAGAACTGATAACGTCCAGGCAGCCCATAGAGAAAGGCACATATATTGTCCGTGAGATCAGGACAGCAATAGATCAGTATGACCAAGAGTATTACGGATTGAAGAGCCTAATTGATCCAACAATCCGGGATTCAGCAAAAATGGTTGGCTTTAGGAGATTTGTGCAGTTGGCTATGGAATGTGTAGAGGAGTCTGCTGCTGACCGCCCGACAATGAATGATGTGGTGAAGGAACTTGAGATTATAATACAAAATGAAGGGGCACAGTTGCTAAACTCAGCATCTTTATCGGCTCAGCAGTTTGGATATGCAAAGGGTAGAGATCCAGATCCTTATGGAGATCATGTGCCTATCAATGATGACAGCAGCAGCAGTGCTTTTGATTACAACAGTGTATATTCATACTCAGTTGTTGAACCAAAGTAGATATGATGTATTGGTTTTGCTTATCTCCTACTCATTGTAAAGGACAATATGTAGTCTACAATATCATATTTTTTGTGTTGATAAAAACCAAGGTCTGGATATTTTATAAGCATACACTGGCCAGATGAAACAGCAGAGGATGATCTTTCTATAGAA
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| CDS seq | ATGAAGAATTGGCAGAATGAACCGCAAAGCTGGATGGGATCGACTGATCCCTGCACCTCCTGGGATGGAATTTCCTGTTCCAATGGGAGGGTGACAGAAATGAGATTATCAGGCATTAATCTGCAAGGCACATTAAGCAATGCAATAGACCAACTTTCTTCTTTGACATATCTGGATCTGTCTAACAACCTAAATCTTGGAGGTCCACTTCCTCCAAGCATTGTGAATCTGAAGCAGCTCACAACTCTGATTTTACTTGGATGCAGTTTCACTGGTGATATTCCAGAGCAGATCGGAGCATTAAGGCAACTCACATTCCTGGCCCTGAACTCAAATAAGTTCACTGGTGGAATCCCCCCAACACTTGGCCTTCTCTCTAAGCTTTTTTGGTTGGACTTGTCAGACAATCAGCTGTCGGGGAAAATACCGGTTTCATCAGGTTCAAACCCAGGGCTGGATCAGCTTGTTAATGCAGAACATTTCCATTTCAGTGAGAACCAGTTGACAGGCCCAATTGACGAAAAGCTTTTCAGTGAAAAAATGAACCTTATACACGTGATATTTGACAACAATAACTTTACTGGACCAATCCCAGGATCTCTCGGGAGAGTCTCATCAATTCAAATTATCCGACTAGATCATAACCAATTCAGTGGTCCAGTTCCAGGAAGTATAGCAAACCTATCTCGTCTGATGGAACTGAGCTTAGCAAGCAACCAACTGAATGGGACAGTGCCAGACCTCACCAGTGCAAATGCTCTCACTTATGTGGACCTAAGCAACAATAACTTCATGAGCTCACCAGCACCGCGATGGTTTTCAACATTAACATCCTTGACTACCTTATTTATGGATAGTGATCATCTTACTGGAACAATCCCCAGTGCCCTGTTCAGTTTCCCGCAATTGCAGCAAATATCATTAGCTAAGAATTCATTCAGTGGGGAACTTAATATGAGCAGTAACATCAGTTCACTACTGCGGGTTGTTAATTTGACAAACAATCAGATCTTCAATGCTGAAGTTGACCCAAGCTACACCGGCAGCCTCATACTATCAGGCAATCTTATATGCTTCAACAATATCAGTTTCTGCACACTCAAGCAAAAGCAGCAAGTGCCATACTCAACAAACCTAGGTCCATGTGGTGCCATTTCATGCCCCACTGACCAGTCAGCAAATCCGGTGGCTTCACAGAACTGTGCTTGCGCCAGCCCCTTCCAGGGTTTGATGATCTTCCGAGCACCAGCCTTCTCTGATGTGACCAATCCCAAGTCATTCCAACCTTTGGAATTTACTCTTGTTCAGAACCTTAGCCTAGCTCCAGGATCAGTTGCCATTTCCAATGTTGAGTTCAGTCCAGGGGAGCCACTAACATTCACAGTGAAGGTTTTTCCAGAGAGCGGAACAAGCTTCAATCACTCAGAGGTTATCAGAATCAGTTCTTCTTTGGTCAACCAAACCTACAAAGCTCCAGCATATTTTGGACCATATAGCTTCATAGCAAGCACATATTTTGCAAGCCCCAGTGGTAAAAGGTCGTCAATGGGCAAAGGTGCAATAATCGGAATAGCGGTTGCTGGTTTTCTCCTTCTTGTTGGCCTTATCCTAGTAGCAATGTATGCTCTAAGGCAGAAAAAAATAGCTAAGGAGGCAGTAGAACGAACTACTAATCCTTTTGCATCATGGGGACAAGGTGGTAAAGATAATGGAGATGTGCCACAGCTGAAGGGAGCAAGATACTTTGCATTTGAGGAACTGAAGAGGTGCACAAACAATTTCTCAGAAACCCAAGAAATAGGATCAGGAGGATATGGGAAGGTGTACAAAGGAATGCTCGCAAATGGGCAAATGGCTGCAATAAAACGCGCACAGCAAGGATCTATGCAAGGTGCAGCTGAATTTAAGAATGAGATAGAACTACTTTCCAGGGTTCATCACAAGAACCTGGTGAGCTTAGTAGGTTTCTGCTATGAACAAGGGGAGCAGATGTTGGTTTATGAGTACATTCCTAATGGGACCTTAAGGGAGAATCTGAAGGGTAAAGGAGGAATGCACTTGGATTGGAAGAAACGCCTTCAAATTGCAGTTGGCTCTGCTAAAGGTCTAGCGTATCTTCATGAACTTGCTGATCCACCAATTATCCATAGAGATATCAAATCAACCAATATCCTTCTGGATGAAAGTCTAAATGCAAAGGTTGCTGATTTTGGTCTTTCAAAGCTGGTATCTGACACAAAAAAGGGCCATGTTTCTACCCAAGTGAAGGGCACACTGGGTTATTTGGATCCTGAATACTACATGACTCAGCAGCTATCTGAGAAGAGTGATGTATATAGCTTTGGAGTTGTCATGCTAGAACTGATAACGTCCAGGCAGCCCATAGAGAAAGGCACATATATTGTCCGTGAGATCAGGACAGCAATAGATCAGTATGACCAAGAGTATTACGGATTGAAGAGCCTAATTGATCCAACAATCCGGGATTCAGCAAAAATGGTTGGCTTTAGGAGATTTGTGCAGTTGGCTATGGAATGTGTAGAGGAGTCTGCTGCTGACCGCCCGACAATGAATGATGTGGTGAAGGAACTTGAGATTATAATACAAAATGAAGGGGCACAGTTGCTAAACTCAGCATCTTTATCGGCTCAGCAGTTTGGATATGCAAAGGGTAGAGATCCAGATCCTTATGGAGATCATGTGCCTATCAATGATGACAGCAGCAGCAGTGCTTTTGATTACAACAGTGTATATTCATACTCAGTTGTTGAACCAAAGTAG
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| Protein seq | MKNWQNEPQSWMGSTDPCTSWDGISCSNGRVTEMRLSGINLQGTLSNAIDQLSSLTYLDLSNNLNLGGPLPPSIVNLKQLTTLILLGCSFTGDIPEQIGALRQLTFLALNSNKFTGGIPPTLGLLSKLFWLDLSDNQLSGKIPVSSGSNPGLDQLVNAEHFHFSENQLTGPIDEKLFSEKMNLIHVIFDNNNFTGPIPGSLGRVSSIQIIRLDHNQFSGPVPGSIANLSRLMELSLASNQLNGTVPDLTSANALTYVDLSNNNFMSSPAPRWFSTLTSLTTLFMDSDHLTGTIPSALFSFPQLQQISLAKNSFSGELNMSSNISSLLRVVNLTNNQIFNAEVDPSYTGSLILSGNLICFNNISFCTLKQKQQVPYSTNLGPCGAISCPTDQSANPVASQNCACASPFQGLMIFRAPAFSDVTNPKSFQPLEFTLVQNLSLAPGSVAISNVEFSPGEPLTFTVKVFPESGTSFNHSEVIRISSSLVNQTYKAPAYFGPYSFIASTYFASPSGKRSSMGKGAIIGIAVAGFLLLVGLILVAMYALRQKKIAKEAVERTTNPFASWGQGGKDNGDVPQLKGARYFAFEELKRCTNNFSETQEIGSGGYGKVYKGMLANGQMAAIKRAQQGSMQGAAEFKNEIELLSRVHHKNLVSLVGFCYEQGEQMLVYEYIPNGTLRENLKGKGGMHLDWKKRLQIAVGSAKGLAYLHELADPPIIHRDIKSTNILLDESLNAKVADFGLSKLVSDTKKGHVSTQVKGTLGYLDPEYYMTQQLSEKSDVYSFGVVMLELITSRQPIEKGTYIVREIRTAIDQYDQEYYGLKSLIDPTIRDSAKMVGFRRFVQLAMECVEESAADRPTMNDVVKELEIIIQNEGAQLLNSASLSAQQFGYAKGRDPDPYGDHVPINDDSSSSAFDYNSVYSYSVVEPK |
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| Function | Probable leucine-rich repeat receptor-like protein kinase At5g49770 [UniProtKB/Swiss-Prot:Q9LT96] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os01g60060 | LOC_Os01g60060.1 | Chr01 | 34738321 | 34744027 | + | MSU_osa1r7 | ||
| CDS seq | ATGAAGAATTGGCAGAATGAACCGCAAAGCTGGATGGGATCGACTGATCCCTGCACCTCCTGGGATGGAATTTCCTGTTCCAATGGGAGGGTGACAGAAATGAGATTATCAGGCATTAATCTGCAAGGCACATTAAGCAATGCAATAGACCAACTTTCTTCTTTGACATATCTGGATCTGTCTAACAACCTAAATCTTGGAGGTCCACTTCCTCCAAGCATTGTGAATCTGAAGCAGCTCACAACTCTGATTTTACTTGGATGCAGTTTCACTGGTGATATTCCAGAGCAGATCGGAGCATTAAGGCAACTCACATTCCTGGCCCTGAACTCAAATAAGTTCACTGGTGGAATCCCCCCAACACTTGGCCTTCTCTCTAAGCTTTTTTGGTTGGACTTGTCAGACAATCAGCTGTCGGGGAAAATACCGGTTTCATCAGGTTCAAACCCAGGGCTGGATCAGCTTGTTAATGCAGAACATTTCCATTTCAGTGAGAACCAGTTGACAGGCCCAATTGACGAAAAGCTTTTCAGTGAAAAAATGAACCTTATACACGTGATATTTGACAACAATAACTTTACTGGACCAATCCCAGGATCTCTCGGGAGAGTCTCATCAATTCAAATTATCCGACTAGATCATAACCAATTCAGTGGTCCAGTTCCAGGAAGTATAGCAAACCTATCTCGTCTGATGGAACTGAGCTTAGCAAGCAACCAACTGAATGGGACAGTGCCAGACCTCACCAGTGCAAATGCTCTCACTTATGTGGACCTAAGCAACAATAACTTCATGAGCTCACCAGCACCGCGATGGTTTTCAACATTAACATCCTTGACTACCTTATTTATGGATAGTGATCATCTTACTGGAACAATCCCCAGTGCCCTGTTCAGTTTCCCGCAATTGCAGCAAATATCATTAGCTAAGAATTCATTCAGTGGGGAACTTAATATGAGCAGTAACATCAGTTCACTACTGCGGGTTGTTAATTTGACAAACAATCAGATCTTCAATGCTGAAGTTGACCCAAGCTACACCGGCAGCCTCATACTATCAGGCAATCTTATATGCTTCAACAATATCAGTTTCTGCACACTCAAGCAAAAGCAGCAAGTGCCATACTCAACAAACCTAGGTCCATGTGGTGCCATTTCATGCCCCACTGACCAGTCAGCAAATCCGGTGGCTTCACAGAACTGTGCTTGCGCCAGCCCCTTCCAGGGTTTGATGATCTTCCGAGCACCAGCCTTCTCTGATGTGACCAATCCCAAGTCATTCCAACCTTTGGAATTTACTCTTGTTCAGAACCTTAGCCTAGCTCCAGGATCAGTTGCCATTTCCAATGTTGAGTTCAGTCCAGGGGAGCCACTAACATTCACAGTGAAGGTTTTTCCAGAGAGCGGAACAAGCTTCAATCACTCAGAGGTTATCAGAATCAGTTCTTCTTTGGTCAACCAAACCTACAAAGCTCCAGCATATTTTGGACCATATAGCTTCATAGCAAGCACATATTTTGCAAGCCCCAGTGGTAAAAGGTCGTCAATGGGCAAAGGTGCAATAATCGGAATAGCGGTTGCTGGTTTTCTCCTTCTTGTTGGCCTTATCCTAGTAGCAATGTATGCTCTAAGGCAGAAAAAAATAGCTAAGGAGGCAGTAGAACGAACTACTAATCCTTTTGCATCATGGGGACAAGGTGGTAAAGATAATGGAGATGTGCCACAGCTGAAGGGAGCAAGATACTTTGCATTTGAGGAACTGAAGAGGTGCACAAACAATTTCTCAGAAACCCAAGAAATAGGATCAGGAGGATATGGGAAGGTGTACAAAGGAATGCTCGCAAATGGGCAAATGGCTGCAATAAAACGCGCACAGCAAGGATCTATGCAAGGTGCAGCTGAATTTAAGAATGAGATAGAACTACTTTCCAGGGTTCATCACAAGAACCTGGTGAGCTTAGTAGGTTTCTGCTATGAACAAGGGGAGCAGATGTTGGTTTATGAGTACATTCCTAATGGGACCTTAAGGGAGAATCTGAAGGGTAAAGGAGGAATGCACTTGGATTGGAAGAAACGCCTTCAAATTGCAGTTGGCTCTGCTAAAGGTCTAGCGTATCTTCATGAACTTGCTGATCCACCAATTATCCATAGAGATATCAAATCAACCAATATCCTTCTGGATGAAAGTCTAAATGCAAAGGTTGCTGATTTTGGTCTTTCAAAGCTGGTATCTGACACAAAAAAGGGCCATGTTTCTACCCAAGTGAAGGGCACACTGGGTTATTTGGATCCTGAATACTACATGACTCAGCAGCTATCTGAGAAGAGTGATGTATATAGCTTTGGAGTTGTCATGCTAGAACTGATAACGTCCAGGCAGCCCATAGAGAAAGGCACATATATTGTCCGTGAGATCAGGACAGCAATAGATCAGTATGACCAAGAGTATTACGGATTGAAGAGCCTAATTGATCCAACAATCCGGGATTCAGCAAAAATGGTTGGCTTTAGGAGATTTGTGCAGTTGGCTATGGAATGTGTAGAGGAGTCTGCTGCTGACCGCCCGACAATGAATGATGTGGTGAAGGAACTTGAGATTATAATACAAAATGAAGGGGCACAGTTGCTAAACTCAGCATCTTTATCGGCTCAGCAGTTTGGATATGCAAAGGGTAGAGATCCAGATCCTTATGGAGATCATGTGCCTATCAATGATGACAGCAGCAGCAGTGCTTTTGATTACAACAGTGTATATTCATACTCAGTTGTTGAACCAAAGTAG
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| Protein seq | MKNWQNEPQSWMGSTDPCTSWDGISCSNGRVTEMRLSGINLQGTLSNAIDQLSSLTYLDLSNNLNLGGPLPPSIVNLKQLTTLILLGCSFTGDIPEQIGALRQLTFLALNSNKFTGGIPPTLGLLSKLFWLDLSDNQLSGKIPVSSGSNPGLDQLVNAEHFHFSENQLTGPIDEKLFSEKMNLIHVIFDNNNFTGPIPGSLGRVSSIQIIRLDHNQFSGPVPGSIANLSRLMELSLASNQLNGTVPDLTSANALTYVDLSNNNFMSSPAPRWFSTLTSLTTLFMDSDHLTGTIPSALFSFPQLQQISLAKNSFSGELNMSSNISSLLRVVNLTNNQIFNAEVDPSYTGSLILSGNLICFNNISFCTLKQKQQVPYSTNLGPCGAISCPTDQSANPVASQNCACASPFQGLMIFRAPAFSDVTNPKSFQPLEFTLVQNLSLAPGSVAISNVEFSPGEPLTFTVKVFPESGTSFNHSEVIRISSSLVNQTYKAPAYFGPYSFIASTYFASPSGKRSSMGKGAIIGIAVAGFLLLVGLILVAMYALRQKKIAKEAVERTTNPFASWGQGGKDNGDVPQLKGARYFAFEELKRCTNNFSETQEIGSGGYGKVYKGMLANGQMAAIKRAQQGSMQGAAEFKNEIELLSRVHHKNLVSLVGFCYEQGEQMLVYEYIPNGTLRENLKGKGGMHLDWKKRLQIAVGSAKGLAYLHELADPPIIHRDIKSTNILLDESLNAKVADFGLSKLVSDTKKGHVSTQVKGTLGYLDPEYYMTQQLSEKSDVYSFGVVMLELITSRQPIEKGTYIVREIRTAIDQYDQEYYGLKSLIDPTIRDSAKMVGFRRFVQLAMECVEESAADRPTMNDVVKELEIIIQNEGAQLLNSASLSAQQFGYAKGRDPDPYGDHVPINDDSSSSAFDYNSVYSYSVVEPK
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.211668 | 0.019923 | 0.179034 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0816600 | RBH | 0.337011 | 0.031894 | 0.446162 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os05g40770 | RBH | 0.396130 | 0.054266 | 0.460232 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0816600 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0038040 | RBH | 0.0 | 3.965657 | 0.132530 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0037480 | RBH | 0.034916 | 1.535580 | 0.504719 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0037890 | RBH | 0.281121 | 0.819748 | 0.766968 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0037290 | RBH | 0.018875 | 0.089991 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0036980 | RBH | 1.038489 | 4.485000 | 1.306294 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0574700 | RBH | 0.635601 | 5.4019945 | 0.712083 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0036680 | RBH | 0.026429 | 0.131292 | 0.246046 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0571200 | RBH | 0.2264625 | 5.684194 | 0.6337465 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0036890 | RBH | 0.016039 | 0.264188 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0036940 | RBH | 0.069319 | 3.891137 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0037170 | RBH | 1.286931 | 5.117091 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0037230 | RBH | 0.133508 | 0.070286 | 0.062917 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0037000 | RBH | 0.019511 | 1.120625 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G037530 | RBH | 0.034588 | 0.424696 | 0.228444 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0037210 | RBH | 0.0 | 7.108043 | 0.110062 |
