Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os01g59050 | OGI:01101990 | 16/16 | Nipponbare | IRGSP 1.0 | MSU | Chr01:34131829-34133381 | ||||||||
| Gene Symbol | CYP94D6, OsCYP94D6 | ||||||||||
| DNA seq | ATGGGCACAGAGCTCTCGTTGACTTCATCCGTTCCCCTGCTCCTCCTCTTGCTGTTTCCTTTGCTCTGTTTCCTCTGCCTGCGCCATGGCAGCACCAGGAAGCAGCCTCGCGCCGACGGCCTCAAGGCCTACCCGATCGTCGGCATACTGCCACACTTCGTCAGGAACCAGCACCGCCTCCTCGAGTGGTCGGCCGGCGTCGTGGCGCGCTGCCCCACGCACACCATGTCCTTCAACTTCAAGGGCTTCGGCCTCATCGCCGGCGCCATCACCGGCAACCCGGCCAACGTCGAACACATCGTCAAGACCAACTTCCAGAACTACTCCAAGGGGGAGTACGTGGTGTCAGTCATGGAGGACTTCCTCGGCCACGGCATCTTCAACTCCGACGGCGACCAGTGGCTGTGGCAGCGGAAGGCCGCCAGCTACGAGTTCAACAAGCGCTCGCTGAGGAACTTCGTGGTCGACACCGTCAGGTCCGAGGTCGTCGATAGGCTGCTGCCGCTGCTCACGCGGGCGGAGCGCGACGGCCGGACGCTGGACGAGCAGGACGTGCTCGAGCGCTTCGCGTTCGACAACGTCTGCTGCGTCGCCTTCGACGAGGACCCGGCGTGCCTCACCGAGGAGGGGATGGGGACGAACGCGCGGACCGAGTTCCTGCGCGCCTTCAACGACGCGCAGAACATCCTCATGGCGCGGTTCATGTCGCCGGTCGAGTGGGCATGGCGCGCCAAGAGGCTGCTCGACTTGGAGCCGGAGAGGCGGATGCGGGAGGCGCTCGCCACGATCCATGGCTACGCCGACAGGATCGTCCGCGAGCGGAGGGAGAGGGGCGCGGCGGGGCTGGCGCGCAAGGACGACTTCCTGTCGCGCTTCGCCGCGACCGGCAAGCACAGCGACGAGAGCCTCCGCGACGTGGCACCAACTTCGTCCTCGCCGGGCGCGACACGACGTCGTCGGCGCTGACCTGGTTCTTCTGGCTGGTGTCCGGCCAGCCGGACGTGGAGGACAGGATCGCGCGCGAGATCCGCGCGGTGCGCGCGTCGAGCGGGAGCACGGACGCGGCGGCGTTCAGCTTTGACGAGCTGCGCGAGATGCACTACCTGCACGCGGCCATCACGGAGGCGATGCGGCTGTACCCGCCCGTGGCCATGGACTCGCACTGCTGCCAGAACGACGACGTCTTGCCGGACGGCACGTTCGTCGGCAAAGGATGGCAGGTCACCTACAGCGCGTACGCCATGGCGCGCTTGGAGGAGTTATGGGGCGCGGACTGCGAGGAGTTCAGGCCGGAGCGGTGGCTCGACGAGGACGGCGTGTTCCGGCCGGAGAGCCCGTTCAAGTACCCGGTGTTCCACGGCGGGCCGAGGATGTGCCTCGGCAAGGAGATGGCATACATACAGATGAAGTCCATCGCGGCGTGCGTGTTCGAGAGGTTCAGCTTCAGGTTCGTCGGCGGCGAGGGACGGCCAGGGCTTGTGTTCTCGGTGACCTTGAGGATGGAAGGCGGCTTGCCGATGCGAGTGAAGAAGAGGAGGGATTCAGTTTGTTAG
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| CDS seq | ATGGGCACAGAGCTCTCGTTGACTTCATCCGTTCCCCTGCTCCTCCTCTTGCTGTTTCCTTTGCTCTGTTTCCTCTGCCTGCGCCATGGCAGCACCAGGAAGCAGCCTCGCGCCGACGGCCTCAAGGCCTACCCGATCGTCGGCATACTGCCACACTTCGTCAGGAACCAGCACCGCCTCCTCGAGTGGTCGGCCGGCGTCGTGGCGCGCTGCCCCACGCACACCATGTCCTTCAACTTCAAGGGCTTCGGCCTCATCGCCGGCGCCATCACCGGCAACCCGGCCAACGTCGAACACATCGTCAAGACCAACTTCCAGAACTACTCCAAGGGGGAGTACGTGGTGTCAGTCATGGAGGACTTCCTCGGCCACGGCATCTTCAACTCCGACGGCGACCAGTGGCTGTGGCAGCGGAAGGCCGCCAGCTACGAGTTCAACAAGCGCTCGCTGAGGAACTTCGTGGTCGACACCGTCAGGTCCGAGGTCGTCGATAGGCTGCTGCCGCTGCTCACGCGGGCGGAGCGCGACGGCCGGACGCTGGACGAGCAGGACGTGCTCGAGCGCTTCGCGTTCGACAACGTCTGCTGCGTCGCCTTCGACGAGGACCCGGCGTGCCTCACCGAGGAGGGGATGGGGACGAACGCGCGGACCGAGTTCCTGCGCGCCTTCAACGACGCGCAGAACATCCTCATGGCGCGGTTCATGTCGCCGGTCGAGTGGGCATGGCGCGCCAAGAGGCTGCTCGACTTGGAGCCGGAGAGGCGGATGCGGGAGGCGCTCGCCACGATCCATGGCTACGCCGACAGGATCGTCCGCGAGCGGAGGGAGAGGGGCGCGGCGGGGCTGGCGCGCAAGGACGACTTCCTGTCGCGCTTCGCCGCGACCGGCAAGCACAGCGACGAGAGCCTCCGCGACCCGGACGTGGAGGACAGGATCGCGCGCGAGATCCGCGCGGTGCGCGCGTCGAGCGGGAGCACGGACGCGGCGGCGTTCAGCTTTGACGAGCTGCGCGAGATGCACTACCTGCACGCGGCCATCACGGAGGCGATGCGGCTGTACCCGCCCGTGGCCATGGACTCGCACTGCTGCCAGAACGACGACGTCTTGCCGGACGGCACGTTCGTCGGCAAAGGATGGCAGGTCACCTACAGCGCGTACGCCATGGCGCGCTTGGAGGAGTTATGGGGCGCGGACTGCGAGGAGTTCAGGCCGGAGCGGTGGCTCGACGAGGACGGCGTGTTCCGGCCGGAGAGCCCGTTCAAGTACCCGGTGTTCCACGGCGGGCCGAGGATGTGCCTCGGCAAGGAGATGGCATACATACAGATGAAGTCCATCGCGGCGTGCGTGTTCGAGAGGTTCAGCTTCAGGTTCGTCGGCGGCGAGGGACGGCCAGGGCTTGTGTTCTCGGTGACCTTGAGGATGGAAGGCGGCTTGCCGATGCGAGTGAAGAAGAGGAGGGATTCAGTTTGTTAG
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| Protein seq | MGTELSLTSSVPLLLLLLFPLLCFLCLRHGSTRKQPRADGLKAYPIVGILPHFVRNQHRLLEWSAGVVARCPTHTMSFNFKGFGLIAGAITGNPANVEHIVKTNFQNYSKGEYVVSVMEDFLGHGIFNSDGDQWLWQRKAASYEFNKRSLRNFVVDTVRSEVVDRLLPLLTRAERDGRTLDEQDVLERFAFDNVCCVAFDEDPACLTEEGMGTNARTEFLRAFNDAQNILMARFMSPVEWAWRAKRLLDLEPERRMREALATIHGYADRIVRERRERGAAGLARKDDFLSRFAATGKHSDESLRDPDVEDRIAREIRAVRASSGSTDAAAFSFDELREMHYLHAAITEAMRLYPPVAMDSHCCQNDDVLPDGTFVGKGWQVTYSAYAMARLEELWGADCEEFRPERWLDEDGVFRPESPFKYPVFHGGPRMCLGKEMAYIQMKSIAACVFERFSFRFVGGEGRPGLVFSVTLRMEGGLPMRVKKRRDSVC |
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| Function | Cytochrome P450 94A1 [UniProtKB/Swiss-Prot:O81117] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os01g59050 | LOC_Os01g59050.1 | Chr01 | 34131829 | 34133381 | + | MSU_osa1r7 | ||
| CDS seq | ATGGGCACAGAGCTCTCGTTGACTTCATCCGTTCCCCTGCTCCTCCTCTTGCTGTTTCCTTTGCTCTGTTTCCTCTGCCTGCGCCATGGCAGCACCAGGAAGCAGCCTCGCGCCGACGGCCTCAAGGCCTACCCGATCGTCGGCATACTGCCACACTTCGTCAGGAACCAGCACCGCCTCCTCGAGTGGTCGGCCGGCGTCGTGGCGCGCTGCCCCACGCACACCATGTCCTTCAACTTCAAGGGCTTCGGCCTCATCGCCGGCGCCATCACCGGCAACCCGGCCAACGTCGAACACATCGTCAAGACCAACTTCCAGAACTACTCCAAGGGGGAGTACGTGGTGTCAGTCATGGAGGACTTCCTCGGCCACGGCATCTTCAACTCCGACGGCGACCAGTGGCTGTGGCAGCGGAAGGCCGCCAGCTACGAGTTCAACAAGCGCTCGCTGAGGAACTTCGTGGTCGACACCGTCAGGTCCGAGGTCGTCGATAGGCTGCTGCCGCTGCTCACGCGGGCGGAGCGCGACGGCCGGACGCTGGACGAGCAGGACGTGCTCGAGCGCTTCGCGTTCGACAACGTCTGCTGCGTCGCCTTCGACGAGGACCCGGCGTGCCTCACCGAGGAGGGGATGGGGACGAACGCGCGGACCGAGTTCCTGCGCGCCTTCAACGACGCGCAGAACATCCTCATGGCGCGGTTCATGTCGCCGGTCGAGTGGGCATGGCGCGCCAAGAGGCTGCTCGACTTGGAGCCGGAGAGGCGGATGCGGGAGGCGCTCGCCACGATCCATGGCTACGCCGACAGGATCGTCCGCGAGCGGAGGGAGAGGGGCGCGGCGGGGCTGGCGCGCAAGGACGACTTCCTGTCGCGCTTCGCCGCGACCGGCAAGCACAGCGACGAGAGCCTCCGCGACCCGGACGTGGAGGACAGGATCGCGCGCGAGATCCGCGCGGTGCGCGCGTCGAGCGGGAGCACGGACGCGGCGGCGTTCAGCTTTGACGAGCTGCGCGAGATGCACTACCTGCACGCGGCCATCACGGAGGCGATGCGGCTGTACCCGCCCGTGGCCATGGACTCGCACTGCTGCCAGAACGACGACGTCTTGCCGGACGGCACGTTCGTCGGCAAAGGATGGCAGGTCACCTACAGCGCGTACGCCATGGCGCGCTTGGAGGAGTTATGGGGCGCGGACTGCGAGGAGTTCAGGCCGGAGCGGTGGCTCGACGAGGACGGCGTGTTCCGGCCGGAGAGCCCGTTCAAGTACCCGGTGTTCCACGGCGGGCCGAGGATGTGCCTCGGCAAGGAGATGGCATACATACAGATGAAGTCCATCGCGGCGTGCGTGTTCGAGAGGTTCAGCTTCAGGTTCGTCGGCGGCGAGGGACGGCCAGGGCTTGTGTTCTCGGTGACCTTGAGGATGGAAGGCGGCTTGCCGATGCGAGTGAAGAAGAGGAGGGATTCAGTTTGTTAG
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| Protein seq | MGTELSLTSSVPLLLLLLFPLLCFLCLRHGSTRKQPRADGLKAYPIVGILPHFVRNQHRLLEWSAGVVARCPTHTMSFNFKGFGLIAGAITGNPANVEHIVKTNFQNYSKGEYVVSVMEDFLGHGIFNSDGDQWLWQRKAASYEFNKRSLRNFVVDTVRSEVVDRLLPLLTRAERDGRTLDEQDVLERFAFDNVCCVAFDEDPACLTEEGMGTNARTEFLRAFNDAQNILMARFMSPVEWAWRAKRLLDLEPERRMREALATIHGYADRIVRERRERGAAGLARKDDFLSRFAATGKHSDESLRDPDVEDRIAREIRAVRASSGSTDAAAFSFDELREMHYLHAAITEAMRLYPPVAMDSHCCQNDDVLPDGTFVGKGWQVTYSAYAMARLEELWGADCEEFRPERWLDEDGVFRPESPFKYPVFHGGPRMCLGKEMAYIQMKSIAACVFERFSFRFVGGEGRPGLVFSVTLRMEGGLPMRVKKRRDSVC
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.121053 | 0.172531 | 0.104282 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0804900 | RBH | 0.229131 | 0.254075 | 0.314776 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os05g41440 | SBH | 5.753678 | 7.909885 | 5.286335 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0803800 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0037230 | SBH | 0.0 | 2.877311 | 0.578328 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0036660 | SBH | 0.072172 | 1.759632 | 1.170231 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0037060 | SBH | 0.200988 | 2.879822 | 1.085139 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0036510 | SBH | 0.0 | 0.097070 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0036090 | SBH | 0.0 | 0.0 | 0.670674 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0563300 | RBH | 0.5322385 | 2.542311 | 0.472449 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0035830 | SBH | 0.0 | 0.718195 | 0.000000 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0560700 | SBH | 0.010658 | 0.05154 | 0.01618 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0035950 | RBH | 0.0 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0036020 | SBH | 0.0 | 0.364335 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0036260 | SBH | 0.0 | 1.372951 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0036320 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0036110 | SBH | 0.0 | 0.664972 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G036610 | SBH | 0.826504 | 0.0 | 0.449362 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0036330 | SBH | 0.0 | 15.221929 | 0.147255 |
